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At least 73 records · Page 4

Advanced multi-modal mass spectrometry imaging reveals functional differences of placental villous compartments at microscale resolution

The placenta is a complex and heterogeneous organ that links the mother and fetus, playing a crucial role in nourishing and protecting the fetus throughout pregnancy. Integrative spatial multi-omics approaches can provide a systems-level understanding of molecular changes underlying the mechanisms leading to the histological variations of the placenta during healthy pregnancy and pregnancy complications. Herein, we advance our metabolome-informed proteome imaging (MIPI) workflow to include lipidomic imaging, while also expanding the molecular coverage of metabolomic imaging by incorporating on-tissue chemical derivatization (OTCD). The improved MIPI workflow advances biomedical investigations by leveraging state-of-the-art molecular imaging technologies. Lipidome imaging identifies molecular differences between two morphologically distinct compartments of a placental villous functional unit, syncytiotrophoblast (STB) and villous core. Next, our advanced metabolome imaging maps villous functional units with enriched metabolomic activities related to steroid and lipid metabolism, outlining distinct molecular distributions across morphologically different villous compartments. Complementary proteome imaging on these villous functional units reveals a plethora of fatty acid- and steroid-related enzymes uniquely distributed in STB and villous core compartments. Integration across our advanced MIPI imaging modalities enables the reconstruction of active biological pathways of molecular synthesis and maternal-fetal signaling across morphologically distinct placental villous compartments with micrometer-scale resolution.

60 APPLIED LIFE SCIENCES↗

Unraveling the Physics Associated with the Production of Extremely Dense Plasma States of Microscale Nanosecond-pulsed Discharges

The research carried out on this grant aimed to study the properties of anomalously dense plasmas formed in so-called ”fast” discharges, such as high pressure narrow-gap nanosecond pulsed discharges and short pulse (nanosecond-scale) laser driven discharges. These fast discharges are receiving much attention as they now enable new applications in aerodynamics, combustion, biology, and medicine. The mechanisms that generate these high electron densities (ne > 10 19 cm −3 ) that encroach on warm dense matter regimes are not well understood. Such densities are orders of magnitude higher than those (≈ 10 15 cm −3 ) routinely seen in classical high-pressures (streamer) discharges. Furthermore, the dense plasmas are reported to be highly nonequilibrium, with T gas <<, T i << T e . These properties would place these discharges in a regime of near full ionization (Z ≥ 1) where there is inadequate electron screening and therefore strong ion coupling - physics that is not generally accounted for in simulations. In this project work, we seek to study these fast discharges, validate simulations with experiments at pressures as high as 10-50 bar, and augment plasma production to even higher levels of n e (> 10 20 cm −3 ) with second-stage picosecond laser heating. In parallel, we have studied the use of these fast discharges in reactive gases, unraveling mechanisms related to the fast discharge dissociation of CO 2 .

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Development of High Energy Resolution Fluorescence Detection Methods for Advanced Microscale X-ray Absorption Fine Structure Analysis of Critical Elements (Final Report)

This project is developing High-Energy Resolution Fluorescence Detection (HERFD) X-ray Absorption Fine-Structure Spectroscopy (XAFS) at the hard X-ray microprobe beamline at GSECARS beamline 13-ID-E, at the Advanced Photon Source at Argonne National Laboratory. This enhancement will improve sensitivity and spectral interpretation limitations of conventional XAFS which uses energy dispersive solid-state detectors (SSD) to measure the total fluorescence yield (TFY-XAFS). By using high-quality Si and Ge crystal analyzers to select X-ray fluorescence (XRF) from specific emission lines, background signals from other elements or X-ray scattering that can paralyze SSDs can be nearly eliminated, improving the sensitivity to the oxidation and chemical state of dilute species even though the solid angle of the analyzers is relatively small. Furthermore, by using analyzers of low-strain Si or Ge, the energy selection can be smaller than the natural widths of the core electron level. We are particularly interested in applying these enhanced sensitivities to Lanthanide series of rare-earth elements, which are typically at concentrations at or below 10 ppm, and where spectral overlaps with the 3rd row transition metals degrade sensitivity.

47 OTHER INSTRUMENTATION↗

Identifying Hot Spots and Hot Moments of Metabolic Activity in Salt Marsh Sediments through BONCAT-FISH Microscale Mapping (Final Technical Report)

Understanding the biogeography and timing of microbial metabolic activity is a key priority for microbial ecologists. With such knowledge, the cumulative biogeochemical contributions of microbial communities become more predictable, and our ability to both understand the effects of environmental change on microbial activity and build synthetic communities with desired functions will increase substantially. In this project, we advanced this broad, ambitious goal in two substantial ways: we developed a multiplexed Fluorescence In Situ Hybridization (FISH) approach that links microbial identity with metabolic function, and we established a novel Bio-Orthogonal Non-Canonical Amino acid Tagging (BONCAT) technique that can resolve the timing of anabolic activity, providing new resolution of when microbial constituents are growing. We deployed both of these techniques in multiple environmental settings to demonstrate their versatility. At the Little Sippewissett Salt Marsh, we combined a novel dual-BONCAT technique with fluorescence activated cell sorting to determine which population of cells was metabolically active during the day and which was active during the night. We found that Methylobacterium was active during daylight hours, potentially feeding on carbon-rich molecules released from plant roots. Sulfur-cycling microbes dominate the population active during the dark night-time hours. Overall, the work conducted under the auspices of this project developed two promising new techniques for identifying the “hot spots” and “hot moments” of microbial activity in complex communities with taxonomic and functional resolution. We focused largely on a salt marsh sediment context, but are confident that microbial ecologists seeking to understand the microbial role in biogeochemical cycles in a wide range of settings will find our newly developed techniques useful in future work.

54 ENVIRONMENTAL SCIENCES↗

Microscale fluctuations in the solar wind

Theoretical constraints on the interpretation of fluctuations (either propagating or stationary) in the interplanetary medium are reviewed, with emphasis on the important differences between the properties of hydromagnetic waves (and stationary structures) in collisionless and in collision-dominated plasmas, and on the possible roles of Landau damping and nonlinear effects in determining the interplanetary fluctuation spectrum. Hypotheses about the origins of the fluctuations and their influence on the large-scale properties of the solar wind are reviewed.

Barnes, A. A., Jr.↗

Microscale 'Alfven waves' in the solar wind at 1 AU

Data obtained by IMP 1 about interplanetary plasma and magnetic-field fluctuations on a scale of one hour are analyzed. It is found that linearly and circularly polarized Alfven waves were rarely present. Fluctuations having most of the characteristics of large-amplitude 'Alfven waves' and which were observed to be moving away from the sun nearly along the magnetic-field direction are shown not to have been pure transverse Alfven waves since they were accompanied by nonzero fluctuations in the magnetic-field intensity. It is suggested that the fluctuations may have been nonlinear elliptically polarized Alfven waves coupled to the fast mode and moving through a magnetic field that is nonuniform on a scale not exceeding about 0.01 AU.

Burlaga, L. F.↗

Multispacecraft observations of microscale fluctuations in the solar wind

Data from the Explorer 33 and 35 satellites were used to study Alfvenic fluctuations (i.e., fluctuations with a high correlation between perturbation in velocity and magnetic field) in the solar wind. It was found that the average minimum variance method does not give a good estimate of the phase front direction of these fluctuations. There is a distinct class of Alfvenic fluctuations with phase planes nearly parallel to the mean field B sub 0. The characteristic length of the phase fronts of the fluctuations is probably significantly greater than 50 R-E. It is concluded that since tangential discontinuities and possibly other types of static structures appear in Alfvenic fluctuations, these fluctuations are not solely Alfven waves.

Denskat, K. U.↗

The multiple nesting of mesoscale, submesoscale, and nonhydrostatic microscale numerical models for a case of mesocyclogenesis and severe storm development

A fundamental approach involving the integration of two different numerical models over several different spatial mesh lengths is considered. Model I is a hydrostatic, incompressible, and adiabatic primitive (Newtonian) equation set with no boundary layer forcing, i.e., surface heat or moisture flux or external frictional stresses. Typically this model is initialized from conventional radiosonde data and run for a 12-15 hour forecast period over a 40 km horizontal mesh. If phase I of the tornado developmental processes develops, the data is 'frozen' in space and time, interpolated to a 20 km mesh, and integrated for a shorter time period (3 hours) with a shorter time step. Model II is a nonhydrostatic compressible 18-level complement of model I. If model II indicates the development of the intensification of phase V dynamical processes, the data is frozen and interpolated to finer mesh lengths until the tornadic circulation system is approximated

Kaplan, M. L.↗

A real-time subsynoptic, meso, and microscale severe storm forecast system

A system of differential equations is integrated numerically in space and time over several different matrices in an effort to simulate the atmospheric wave structures which organize severe local storms. Preliminary results with case studies indicate that dynamical fields produced by the numerical simulations can be translated into very fine scale space and time zones where severe storm forecast indices can be developed. These fine scale indices are now available in real-time when run on Langley's STAR 100 computer system.

Kaplan, M. L.↗

Microscale instabilities in stream interaction regions

The microstructure of solar wind stream interaction regions is considered theoretically with emphasis on the role of several electrostatic kinetic instabilities which may be important within the stream interface and the compression region. Inside of 1 AU, the interface is likely to be stable against the electrostatic streaming instabilities considered. Between 1 and 2 AU, the interface will excite the magnetized ion-ion instability. The compression region is also found to be unstable beyond 1 AU where the modified two-stream instability, beam-cyclotron instability, and ion-acoustic instability are important in determining the structure of the compressive pulses as they evolve into forward and reverse shocks. It is concluded that the modified two-stream instability and beam-cyclotron instability predominately play a role in heating the electrons to the threshold for the ion-acoustic instability. Various electrostatic plasma waves, ranging in frequency from the lower-hybrid to harmonics of the electron cyclotron frequency, would be produced by these instabilities. Their signature should also be seen by high time resolution measurements of the temperature of the various plasma species.

Eviatar, A.↗

Microscale instabilities in stream interaction regions

A theoretical investigation of the microstructure of solar wind stream interaction regions is presented. The role of several electrostatic kinetic instabilities is discussed which may be important within the stream interface and the compression region. Inside of 1 AU the interface is likely to be stable against the electrostatic streaming instabilities considered. Between 1 and 2 AU it is argued that the interface will excite the magnetized ion-ion instability. The compression region is also found to be unstable beyond 1 AU, where the modified two-stream instability, beam-cyclotron instability, and ion-acoustic instability will be important in determining the structure of the compressive pulses as they evolve into forward and reverse shocks. It is concluded that the modified two-stream instability and beam-cyclotron instability predominately play a role in heating the electrons to the threshold for the ion-acoustic instability.

Eviatar, A.↗

Microscale ocean dynamics

The detailed dynamics of the micro-scale ocean surface phenomena are studied along with the relationships among the surface signatures with the underlying dynamical processes. The approach to advance the understanding in this area is as follows: (1) Conduct rigorous theoretical studies of the ocean surface wave dynamics and statistical properties; (2) Conduct process-oriented laboratory experiments to verify the theoretical results, and to provide guidance for further studies; and (3) Prepare testable hypotheses for field verifications and comparisons during the ONR/NASA sponsored Surface Wave Dynamics Experiment (SWADE). An analytic model was established for wave breaking probability to study the influence of wave breaking on the spectrum shape in both deep and finite-depth waters. The spectrum was processed along with the structures of the water surface under the influence of wind and existing waves.

Huang, N.↗

Mesoscale and microscale structure of cirrus clouds - Three case studies

The structure and composition of various types of cirrus clouds were examined using coordinated aircraft and on-ground polarization lidar and Doppler radar measurements carried out during three case studies conducted during autumn or spring in Colorado, Wisconsin, and Utah states. A variety of cirrus cloud types observed included a multilayered orographic cirrus, a 6-km-deep cirrostratus overcast, and a group of fibrous cirrus cloud bands associated with tropopause generating cells, representing three basic cirrus-cloud types. The results on the structure and composition of these clouds provide insights into the microphysical processes and characteristic physical scales involved in the generation of cirrus clouds.

Sassen, Kenneth↗

Microscale synthesis and characterization of polystyrene: NSF-POLYED scholars project

Polystyrene is a familiar polymer with many commercial uses. Its applications range from the clear, high index of refraction, brittle plastic used to form audio cassette and CD cases to the foamed material used in insulated drink cups and packaging material. Polystyrene constitutes 11 percent of the plastics used in packaging with only High Density Polyethylene (HDPE) and Low Density Polyethylene (LDPE) contributing a larger share: so much polystyrene is used today, it is one of six common plastics that manufacturers have assigned an identification code. The code helps recycling efforts. Polystyrene's code is (PS code 6). During the summer and fall of 1992 several new polymeric experiments were developed by the NSF POLYED Scholars for introduction into the chemistry core curriculum. In this presentation, one such project will be discussed. This laboratory project is recommended for a first or second year laboratory course allowing the introduction of polymeric science to undergraduates at the earliest opportunity. The reliability of the experiments which make up this project and the recognition factor of polystyrene, a material we come in contact with everyday, makes the synthesis and characterization of polystyrene a good choice for the introduction of polymerization to undergraduates. This laboratory project appeals to the varied interests of students enrolled in the typical first year chemistry course and becomes an ideal way to introduce polymers to a wide variety of science and engineering students.

Quaal, Karen S.↗