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At least 73 records · Page 4
All sourcesNASA NTRSDOE OSTI
NASA NTRS2001

Dynamic modeling of gene expression data

We describe the time evolution of gene expression levels by using a time translational matrix to predict future expression levels of genes based on their expression levels at some initial time. We deduce the time translational matrix for previously published DNA microarray gene expression data sets by modeling them within a linear framework by using the characteristic modes obtained by singular value decomposition. The resulting time translation matrix provides a measure of the relationships among the modes and governs their time evolution. We show that a truncated matrix linking just a few modes is a good approximation of the full time translation matrix. This finding suggests that the number of essential connections among the genes is small.

NASA Discipline Plant Biology↗
NASA NTRS2009

Thermal Decomposition of an Impure (Roxbury) Siderite: Relevance to the Presence of Chemically Pure Magnetite Crystals in ALH84001 Carbonate Disks

The question of the origin of nanophase magnetite in Martian meteorite ALH84001 has been widely debated for nearly a decade. Golden et al. have reported producing nearly chemically pure magnetite from thermal decomposition of chemically impure siderite [(Fe, Mg, Mn)CO3]. This claim is significant for three reasons: first, it has been argued that chemically pure magnetite present in the carbonate disks in Martian meteorite ALH84001 could have formed by the thermal decomposition of the impure carbonate matrix in which they are embedded; second, the chemical purity of magnetite has been previously used to identify biogenic magnetite; and, third, previous studies of thermal decomposition of impure (Mg,Ca,Mn)-siderites, which have been investigated under a wide variety of conditions by numerous researchers, invariably yields a mixed metal oxide phase as the product and not chemically pure magnetite. The explanation for this observation is that these siderites all possess the same crystallographic structure (Calcite; R3c) so solid solutions between these carbonates are readily formed and can be viewed on an atomic scale as two chemically different but structurally similar lattices.

McKay, D.S.↗
NASA NTRSDate not supplied

Dynamic Mode Decomposition of Unsteady Pressure-Sensitive Paint Measurements for the NASA Unitary Plan Wind Tunnel Tests

This paper describes the Dynamic Mode Decomposition (DMD) of the pressures on the scale model of the Space Launch System (SLS) Block 1 cargo vehicle with the Unsteady Pressure-Sensitive Paint (uPSP) measurements, which were collected in the Ascent Transient Aerodynamics Tests with the Unitary Plan Wind Tunnel 11-by-11-foot Transonic Wind Tunnel in September 2019 at NASA Ames Research Center. The work described in this paper is a part of NASA’s development of a new state-of-the-art uPSP capability in production wind tunnels. The conventional DMD algorithm is based on the Singular Value Decomposition (SVD) of the data matrix. For the matrix of the uPSP measurements of the SLS ATAT, the number of rows is equal to the number of nodes in the grid of the scale model, and the number of columns is equal to the number of frames in the videos taken with 4 Phantom high-speed cameras. In this paper, it is verified that, for the time series with zero mean value, the DMD is equivalent to the decomposition with the Discrete Fourier Transform (DFT). Considering the uPSP is mainly used in the assessment of the unsteady, aerodynamic phenomena, the DMD of the uPSP measurements can be implemented in two steps: (1) subtract the mean value from the uPSP measurement on each of the grid nodes; (2) apply the Fast Fourier Transform (FFT) on the resulting zero-mean time series. The DMD of the uPSP measurements with FFT has two advantages: (1) the computational complexity of FFT is O(N*logN), where N is the length of the time series; (2) compared to the SVD-based DMD algorithm, the DMD with FFT can be easily implemented in parallel processing. A sample matrix of uPSP measurements, at the size of 341 grid nodes and 128 frames, is generated. Figures 1 and 2 show the eigenvalues and the ratios of the eigenvectors, respectively, of the sample matrix, without and with the mean value removed on each of the grid nodes, computed with the SVD-based DMD and the FFT. The figures demonstrate the equivalence of the SVD-based DMD and the decomposition with DFT/FFT for the time series with zero mean value. The results of DMD of the uPSP measurements of the SLS ATAT in September 2019 are presented in the paper. The DMD modes at different frequencies are shown, the aerodynamic phenomena (e.g. shockwave and vortex shedding) are demonstrated and the correlation of the DMD modes with the test configuration parameter (e.g., the Mach Number) is discussed. Figure 3 shows a software tool to visualize the DMD modes. The code to implement the algorithm described in this paper was written in C, with libraries of FFTW for FFT and MPI/OpenMP for parallel processing, and executed on the NASA Pleiades supercomputer. Funding for this research was provided by the NASA Aerosciences Evaluation and Test Capabilities Project.

Pressure-Sensitive Paint↗
NASA NTRS1987

Nonlinear beam kinematics by decomposition of the rotation tensor

A simple matrix expression is obtained for the strain components of a beam in which the displacements and rotations are large. The only restrictions are on the magnitudes of the strain and of the local rotation, a newly-identified kinematical quantity. The local rotation is defined as the change of orientation of material elements relative to the change of orientation of the beam reference triad. The vectors and tensors in the theory are resolved along orthogonal triads of base vectors centered along the undeformed and deformed beam reference axes, so Cartesian tensor notation is used. Although a curvilinear coordinate system is natural to the beam problem, the complications usually associated with its use are circumvented. Local rotations appear explicitly in the resulting strain expressions, facilitating the treatment of beams with both open and closed cross sections in applications of the theory. The theory is used to obtain the kinematical relations for coupled bending, torsion, extension, shear deformation, and warping of an initially curved and twisted beam.

Danielson, D. A.↗
NASA NTRS1987

Nonlinear Beam Kinematics by Decomposition of the Rotation Tensor

A simple matrix expression is obtained for the strain components of a beam in which the displacements and rotations are large. The only restrictions are on the magnitudes of the strain and of the local rotation, a newly-identified kinematical quantity. The local rotation is defined as the change of orientation of material elements relative to the change of orientation of the beam reference triad. The vectors and tensors in the theory are resolved along orthogonal triads of base vectors centered along the undeformed and deformed beam reference axes, so Cartesian tensor notation is used. Although a curvilinear coordinate system is natural to the beam problem, the complications usually associated with its use are circumvented. Local rotations appear explicitly in the resulting strain expressions, facilitating the treatment of beams with both open and closed cross sections in applications of the theory. The theory is used to obtain the kinematical relations for coupled bending, torsion extension, shear deformation, and warping of an initially curved and twisted beam.

Danielson, D. A.↗
NASA NTRS1988

Statistical analysis of effective singular values in matrix rank determination

A major problem in using SVD (singular-value decomposition) as a tool in determining the effective rank of a perturbed matrix is that of distinguishing between significantly small and significantly large singular values to the end, conference regions are derived for the perturbed singular values of matrices with noisy observation data. The analysis is based on the theories of perturbations of singular values and statistical significance test. Threshold bounds for perturbation due to finite-precision and i.i.d. random models are evaluated. In random models, the threshold bounds depend on the dimension of the matrix, the noisy variance, and predefined statistical level of significance. Results applied to the problem of determining the effective order of a linear autoregressive system from the approximate rank of a sample autocorrelation matrix are considered. Various numerical examples illustrating the usefulness of these bounds and comparisons to other previously known approaches are given.

Konstantinides, Konstantinos↗
NASA NTRS1986

Model-size reduction for the buckling and vibration analyses of anisotropic panels

A computational procedure is presented for reducing the size of the model used in the buckling and vibration analyses of symmetric anisotropic panels to that of the corresponding orthotropic model. The key elements of the procedure are the application of an operator splitting technique through the decomposition of the material stiffness matrix of the panel into the sum of orthotropic and nonorthotropic (anisotropic) parts and the use of a reduction method through successive application of the finite element method and the classical Rayleigh-Ritz technique. The effectiveness of the procedure is demonstrated by numerical examples.

Noor, A. K.↗
NASA NTRS1986

Optimally robust redundancy relations for failure detection in uncertain systems

All failure detection methods are based, either explicitly or implicitly, on the use of redundancy, i.e. on (possibly dynamic) relations among the measured variables. The robustness of the failure detection process consequently depends to a great degree on the reliability of the redundancy relations, which in turn is affected by the inevitable presence of model uncertainties. In this paper the problem of determining redundancy relations that are optimally robust is addressed in a sense that includes several major issues of importance in practical failure detection and that provides a significant amount of intuition concerning the geometry of robust failure detection. A procedure is given involving the construction of a single matrix and its singular value decomposition for the determination of a complete sequence of redundancy relations, ordered in terms of their level of robustness. This procedure also provides the basis for comparing levels of robustness in redundancy provided by different sets of sensors.

Lou, X.-C.↗
NASA NTRS1987

Catalytic Layer Makes Aircraft Seats More Fire Retardant

Specially constructed cushion retards fires in aircraft seats through action of catalytic matrix that cracks flammable gaseous decomposition products to less flammable species. Improved cushion contributes substantially to fire safety without adding significantly to weight or to manufacturing cost. In this fire-blocking covering for an aircraft seat cushion, flammable pyrolysis products cracked to less flammable species by catalytic layer covering foam core of cushion. Aluminum foil holds in pyrolysis vapors to promote catalysis and prevent spread of fire by ignition of released vapors.

Parker, John A.↗
NASA NTRS1988

Experimental verification of a large flexible manipulator

A large experimental lightweight manipulator would be useful for material handling, for welding, or for ultrasonic inspection of a large structure, such as an airframe. The flexible parallel link mechanism is designed for high rigidity without increasing weight. This constrained system is analyzed by singular value decomposition of the constraint Jacobian matrix. A verification of the modeling using the assumed mode method is presented. Eigenvalues and eigenvectors of the linearized model are compared to the measured system natural frequencies and their associated mode shapes. The modeling results for large motions are compared to the time response data from the experiments. The hydraulic actuator is verified.

Lee, Jac Won↗
NASA NTRS1990

Dynamic Analysis and Control of Lightweight Manipulators with Flexible Parallel Link Mechanisms

The objective is the theoretical analysis and the experimental verification of dynamics and control of a two link flexible manipulator with a flexible parallel link mechanism. Nonlinear equations of motion of the lightweight manipulator are derived by the Lagrangian method in symbolic form to better understand the structure of the dynamic model. The resulting equation of motion have a structure which is useful to reduce the number of terms calculated, to check correctness, or to extend the model to higher order. A manipulator with a flexible parallel link mechanism is a constrained dynamic system whose equations are sensitive to numerical integration error. This constrained system is solved using singular value decomposition of the constraint Jacobian matrix. Elastic motion is expressed by the assumed mode method. Mode shape functions of each link are chosen using the load interfaced component mode synthesis. The discrepancies between the analytical model and the experiment are explained using a simplified and a detailed finite element model.

Lee, Jeh Won↗
NASA NTRS1991

Dynamic analysis and control of lightweight manipulators with flexible parallel link mechanisms

The flexible parallel link mechanism is designed for increased rigidity to sustain the buckling when it carries a heavy payload. Compared to a one link flexible manipulator, a two link flexible manipulator, especially the flexible parallel mechanism, has more complicated characteristics in dynamics and control. The objective of this research is the theoretical analysis and the experimental verification of dynamics and control of a two link flexible manipulator with a flexible parallel link mechanism. Nonlinear equations of motion of the lightweight manipulator are derived by the Lagrangian method in symbolic form to better understand the structure of the dynamic model. A manipulator with a flexible parallel link mechanism is a constrained dynamic system whose equations are sensitive to numerical integration error. This constrained system is solved using singular value decomposition of the constraint Jacobian matrix. The discrepancies between the analytical model and the experiment are explained using a simplified and a detailed finite element model. The step response of the analytical model and the TREETOPS model match each other well. The nonlinear dynamics is studied using a sinusoidal excitation. The actuator dynamic effect on a flexible robot was investigated. The effects are explained by the root loci and the Bode plot theoretically and experimentally. For the base performance for the advanced control scheme, a simple decoupled feedback scheme is applied.

Lee, Jeh Won↗
NASA NTRS2000

Application of a Reduced Order Kalman Filter to Initialize a Coupled Atmosphere-Ocean Model: Impact on the Prediction of El Nino

A reduced order Kalman Filter, based on a simplification of the Singular Evolutive Extended Kalman (SEEK) filter equations, is used to assimilate observed fields of the surface wind stress, sea surface temperature and sea level into the nonlinear coupled ocean-atmosphere model. The SEEK filter projects the Kalman Filter equations onto a subspace defined by the eigenvalue decomposition of the error forecast matrix, allowing its application to high dimensional systems. The Zebiak and Cane model couples a linear reduced gravity ocean model with a single vertical mode atmospheric model of Zebiak. The compatibility between the simplified physics of the model and each observed variable is studied separately and together. The results show the ability of the model to represent the simultaneous value of the wind stress, SST and sea level, when the fields are limited to the latitude band 10 deg S - 10 deg N. In this first application of the Kalman Filter to a coupled ocean-atmosphere prediction model, the sea level fields are assimilated in terms of the Kelvin and Rossby modes of the thermocline depth anomaly. An estimation of the error of these modes is derived from the projection of an estimation of the sea level error over such modes. This method gives a value of 12 for the error of the Kelvin amplitude, and 6 m of error for the Rossby component of the thermocline depth. The ability of the method to reconstruct the state of the equatorial Pacific and predict its time evolution is demonstrated. The method is shown to be quite robust for predictions I up to six months, and able to predict the onset of the 1997 warm event fifteen months before its occurrence.

Ballabrera-Poy, Joaquim↗
NASA NTRS2000

Application of a Reduced Order Kalman Filter to Initialize a Coupled Atmosphere-Ocean Model: Impact on the Prediction of El Nino

A reduced order Kalman Filter, based on a simplification of the Singular Evolutive Extended Kalman (SEEK) filter equations, is used to assimilate observed fields of the surface wind stress, sea surface temperature and sea level into the nonlinear coupled ocean-atmosphere model of Zebiak and Cane. The SEEK filter projects the Kalman Filter equations onto a subspace defined by the eigenvalue decomposition of the error forecast matrix, allowing its application to high dimensional systems. The Zebiak and Cane model couples a linear reduced gravity ocean model with a single vertical mode atmospheric model of Zebiak. The compatibility between the simplified physics of the model and each observed variable is studied separately and together. The results show the ability of the model to represent the simultaneous value of the wind stress, SST and sea level, when the fields are limited to the latitude band 10 deg S - 10 deg N In this first application of the Kalman Filter to a coupled ocean-atmosphere prediction model, the sea level fields are assimilated in terms of the Kelvin and Rossby modes of the thermocline depth anomaly. An estimation of the error of these modes is derived from the projection of an estimation of the sea level error over such modes. This method gives a value of 12 for the error of the Kelvin amplitude, and 6 m of error for the Rossby component of the thermocline depth. The ability of the method to reconstruct the state of the equatorial Pacific and predict its time evolution is demonstrated. The method is shown to be quite robust for predictions up to six months, and able to predict the onset of the 1997 warm event fifteen months before its occurrence.

Ballabrera-Poy, J.↗
NASA NTRS2004

Thermostructural Analysis of Carbon Cloth Phenolics "Ply Lifting" and Correlation to LHMEL Test Results

This paper provides a discussion of the history of Carbon Cloth Phenolic (CCP) ply lifting in the Redesigned Solid Rocket Motor (RSRM) Program, a brief presentation of theoretical methods used for analytical evaluation, and results of parametric analyses of CCP material subject to test conditions of the Laser Hardened Material Evaluation Laboratory. CCP ply lift can occur in regions of the RSRM nozzle where ply angle to flame surface is generally less than about 20 degrees. There is a heat rate dependence on likelihood and severity of the condition with the higher heating rates generally producing more ply lift. The event occurs in-depth, near the heated surface, where the load necessary to mechanically separate the CCP plies is produced by the initial stages of pyrolysis gas generation due to the thermal decomposition of the phenolic resin matrix. Due to the shallow lay-up angle of the composite, normal components of the indepth mechanical load, due to "pore pressure", are imparted primarily as a cross-ply tensile force on the interlaminar ply boundaries. Tensile capability in the cross-ply (out of plane) direction is solely determined by the matrix material capability. The elevated temperature matrix material capabilities are overcome by pressure induced mechanical normal stress and ply-lift occurs. A theoretical model used for CCP in-depth temperature, pressure, and normal stress prediction, based on first principles, is briefly discussed followed by a parametric evaluation of response variables subject to boundary conditions typical of on-going test programs at the LHMEL facility. Model response demonstrates general trends observed in test and provides insight into the interactivity of material properties and constitutive relationships.

Clayton, Louie↗
NASA NTRS2007

Wavefront Control Toolbox for James Webb Space Telescope Testbed

We have developed a Matlab toolbox for wavefront control of optical systems. We have applied this toolbox to the optical models of James Webb Space Telescope (JWST) in general and to the JWST Testbed Telescope (TBT) in particular, implementing both unconstrained and constrained wavefront optimization to correct for possible misalignments present on the segmented primary mirror or the monolithic secondary mirror. The optical models implemented in Zemax optical design program and information is exchanged between Matlab and Zemax via the Dynamic Data Exchange (DDE) interface. The model configuration is managed using the XML protocol. The optimization algorithm uses influence functions for each adjustable degree of freedom of the optical mode. The iterative and non-iterative algorithms have been developed to converge to a local minimum of the root-mean-square (rms) of wavefront error using singular value decomposition technique of the control matrix of influence functions. The toolkit is highly modular and allows the user to choose control strategies for the degrees of freedom to be adjusted on a given iteration and wavefront convergence criterion. As the influence functions are nonlinear over the control parameter space, the toolkit also allows for trade-offs between frequency of updating the local influence functions and execution speed. The functionality of the toolbox and the validity of the underlying algorithms have been verified through extensive simulations.

Shiri, Ron↗
NASA NTRS2021

Evaluation of Higher-order Quadrature Schemes in Improving Computational Efficiency for Orientation-averaged Single-Scattering Properties of Nonspherical Ice Particles

We evaluate several high-order quadrature schemes for accuracy and efficacy in obtaining orientation-averaged single-scattering properties (SSPs). We use the highly efficient MIDAS to perform electromagnetic scattering calculations to evaluate the gain in efficiency from these schemes. MIDAS is shown to be superior to DDSCAT, a popular discrete dipole approximation (DDA) method. This study is motivated by the fact that quality physical precipitation retrievals rely on using accurate orientation-averaged SSPs derived from realistic hydrometeors as input to radiative transfer Models (RTMs). The DDA has been a popular choice for single-scattering calculations, due to its versatility with respect to target geometry. However, being iterative-solver-based (ISB), the most used DDA codes, e.g. DDSCAT and ADDA, must solve the scattering problem for each orientation of the target separately. As the size parameter and geometric anisotropy of the hydrometeor increase, the number of orientations needed to obtain accurate orientation-averages can increase drastically and so does the computation cost incurred by the ISB-DDA methods. MIDAS is a Direct-Solver-Based (DSB) code, its decomposition of the original large matrix with a high rank into multiple more manageable smaller matrices of lower ranks makes it much more computationally efficient while maintaining excellent accuracy. In addition, direct solvers consider all requested orientations at once, giving MIDAS further advantage over popular ISB-DDA methods. MIDAS, when combined with high-order quadrature for orientation averaging, can be greater than three orders of magnitude more efficient in obtaining RTM-ready SSPs of complex-shaped hydrometeors than existing ISB-DDA methods, with the native quadrature schemes they offer.

Ines Fenni↗
NASA NTRS1975

Multirate sampled-data systems analysis via vector operators

The primary difficulties of both the time-domain switch decomposition method and the frequency-domain decomposition method are overcome by introducing certain matrix operators and performing spectral factorization of resulting matrices of polynomials in the z-transform variable. Topological operations of the switch-decomposition method are simplified. This new approach eliminates the need to solve a system of equations with rational polynomial coefficients such as arises in the frequency-decomposition method. The determination of a multirate sampled-data system's characteristic polynomial no longer requires the evaluation of a determinant of rational polynomial elements. New results on obtaining modified z-transforms from standard z-transforms at a faster rate and vice versa are presented.

Boykin, W. H.↗