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At least 73 records · Page 4
All sourcesNASA NTRSDOE OSTI
NASA NTRS1993

High-performance compression of astronomical images

Astronomical images have some rather unusual characteristics that make many existing image compression techniques either ineffective or inapplicable. A typical image consists of a nearly flat background sprinkled with point sources and occasional extended sources. The images are often noisy, so that lossless compression does not work very well; furthermore, the images are usually subjected to stringent quantitative analysis, so any lossy compression method must be proven not to discard useful information, but must instead discard only the noise. Finally, the images can be extremely large. For example, the Space Telescope Science Institute has digitized photographic plates covering the entire sky, generating 1500 images each having 14000 x 14000 16-bit pixels. Several astronomical groups are now constructing cameras with mosaics of large CCD's (each 2048 x 2048 or larger); these instruments will be used in projects that generate data at a rate exceeding 100 MBytes every 5 minutes for many years. An effective technique for image compression may be based on the H-transform (Fritze et al. 1977). The method that we have developed can be used for either lossless or lossy compression. The digitized sky survey images can be compressed by at least a factor of 10 with no noticeable losses in the astrometric and photometric properties of the compressed images. The method has been designed to be computationally efficient: compression or decompression of a 512 x 512 image requires only 4 seconds on a Sun SPARCstation 1. The algorithm uses only integer arithmetic, so it is completely reversible in its lossless mode, and it could easily be implemented in hardware for space applications.

White, Richard L.↗
NASA NTRS1991

CRUSH: The NSI data compression utility

CRUSH is a data compression utility that provides the user with several lossless compression techniques available in a single application. It is intended that the future development of CRUSH will depend upon feedback from the user community to identify new features and capabilities desired by the users. CRUSH provides an extension to the UNIX Compress program and the various VMS implementations of Compress that many users are familiar with. An important capability added by CRUSH is the addition of additional compression techniques and the option of automatically determining the best technique for a given data file. The CRUSH software is written in C and is designed to run on both VMS and UNIX systems. VMS files that are compressed will regain their full file characteristics upon decompression. To the extent possible, compressed files can be transferred between VMS and UNIX systems, and thus be decompressed on a different system than they were compressed on. Version 1 of CRUSH is currently available. This version is a VAX VMS implementation. Version 2, which has the full range of capabilities for both VMS and UNIX implementations, will be available shortly.

Seiler, ED↗
NASA NTRS1994

Coding For Compression Of Low-Entropy Data

Improved method of encoding digital data provides for efficient lossless compression of partially or even mostly redundant data from low-information-content source. Method of coding implemented in relatively simple, high-speed arithmetic and logic circuits. Also increases coding efficiency beyond that of established Huffman coding method in that average number of bits per code symbol can be less than 1, which is the lower bound for Huffman code.

Yeh, Pen-Shu↗
NASA NTRS2008

Fpack and Funpack Utilities for FITS Image Compression and Uncompression

Fpack is a utility program for optimally compressing images in the FITS (Flexible Image Transport System) data format (see http://fits.gsfc.nasa.gov). The associated funpack program restores the compressed image file back to its original state (as long as a lossless compression algorithm is used). These programs may be run from the host operating system command line and are analogous to the gzip and gunzip utility programs except that they are optimized for FITS format images and offer a wider choice of compression algorithms. Fpack stores the compressed image using the FITS tiled image compression convention (see http://fits.gsfc.nasa.gov/fits_registry.html). Under this convention, the image is first divided into a user-configurable grid of rectangular tiles, and then each tile is individually compressed and stored in a variable-length array column in a FITS binary table. By default, fpack usually adopts a row-by-row tiling pattern. The FITS image header keywords remain uncompressed for fast access by FITS reading and writing software. The tiled image compression convention can in principle support any number of different compression algorithms. The fpack and funpack utilities call on routines in the CFITSIO library (http://hesarc.gsfc.nasa.gov/fitsio) to perform the actual compression and uncompression of the FITS images, which currently supports the GZIP, Rice, H-compress, and PLIO IRAF pixel list compression algorithms.

Pence, W.↗
DOE OSTI2022

Real-time and post-hoc compression for data from Distributed Acoustic Sensing

Distributed Acoustic Sensing (DAS) is an emerging sensing technology that records the strain-rate along fiber optic cables at high spatial and temporal resolution. This technique is becoming a popular tool in seismology, hydrology, and other subsurface monitoring applications. However, due to the large coverage (10’s of km) and high density of measurements (1m spacing at 100’s of Hz), a DAS installation could produce terabytes of data records per day. Because many DAS instruments are deployed in remote locations, this large data size poses significant challenges to its transfer and storage. In this paper, we explore lossless compression methods to reduce the storage requirement in both real-time and post-hoc scenarios. Here we propose a two-stage compression method to improve the compression ratio and compression speed. This two-stage compression method could reduce the storage requirement by 40%, which is 20% more than other lossless methods, such as ZSTD. We demonstrate that the compression method could complete its operation well before the DAS instrument needs to output the next file, making it suitable for real-time DAS acquisition. We also implement a parallel compression method for a post-hoc scenario and demonstrate that our method could effectively utilize a parallel computer. With 256 CPU cores, our parallel compression method achieves the speed of 26GB/second.

58 GEOSCIENCES↗
NASA NTRS1992

Efficient transfer of images over networks

Effective remote observing requires sending large images over long distances. The usual approach to the transfer problem is to require high bandwidth transmission links, which are expensive to install and operate. An alternative approach is to use existing low-bandwidth connections, such as phone lines or the Internet, in a highly efficient manner by compressing the images. The combined use of existing low-cost infrastructure and standard networking software means that remote observing can be made practical even for small observatories with limited network resources. The authors have implemented such a scheme based on the H-transform compression method developed for astronomical images, which are often resistant to compression because they are noisy. The H-transform can be used for either lossy or lossless compression, and compression factors of at least 10 can be achieved with no noticeable losses in the astrometric or photometric properties of the compressed images. The H-transform allows us to organize the information in an image so that the 'useful' information can be sent first, followed by the noise, which makes up the bulk of the transmission. The receiver can invert a partially received set of H-coefficients, creating an image that improves with time. The H-transform is particularly well-suited to this style of incremental reconstruction, because the spatially localized nature of the basis functions of the H-transorm prevents the appearance of artifacts such as ringing around point sources and edges. The authors' implementation uses the WIYN Telescope Control System's TCP-based communications protocol. An 800x800 16-bit astronomical image was sent over a 2400 baud connection, which would normally take about 71 minutes; after only 60 seconds, the partially received H-transform produced an image that did not differ appreciably from the original. This poster presents a quantification of the efficiencies, as well as examples of images reconstructed from partial data.

Percival, J. W.↗
NASA NTRS2005

Improved Compression of Wavelet-Transformed Images

A recently developed data-compression method is an adaptive technique for coding quantized wavelet-transformed data, nominally as part of a complete image-data compressor. Unlike some other approaches, this method admits a simple implementation and does not rely on the use of large code tables. A common data compression approach, particularly for images, is to perform a wavelet transform on the input data, and then losslessly compress a quantized version of the wavelet-transformed data. Under this compression approach, it is common for the quantized data to include long sequences, or runs, of zeros. The new coding method uses prefixfree codes for the nonnegative integers as part of an adaptive algorithm for compressing the quantized wavelet-transformed data by run-length coding. In the form of run-length coding used here, the data sequence to be encoded is parsed into strings consisting of some number (possibly 0) of zeros, followed by a nonzero value. The nonzero value and the length of the run of zeros are encoded. For a data stream that contains a sufficiently high frequency of zeros, this method is known to be more effective than using a single variable length code to encode each symbol. The specific prefix-free codes used are from two classes of variable-length codes: a class known as Golomb codes, and a class known as exponential-Golomb codes. The codes within each class are indexed by a single integer parameter. The present method uses exponential-Golomb codes for the lengths of the runs of zeros, and Golomb codes for the nonzero values. The code parameters within each code class are determined adaptively on the fly as compression proceeds, on the basis of statistics from previously encoded values. In particular, a simple adaptive method has been devised to select the parameter identifying the particular exponential-Golomb code to use. The method tracks the average number of bits used to encode recent runlengths, and takes the difference between this average length and the code parameter. When this difference falls outside a fixed range, the code parameter is updated (increased or decreased). The Golomb code parameter is selected based on the average magnitude of recently encoded nonzero samples. The coding method requires no floating- point operations, and more readily adapts to local statistics than other methods. The method can also accommodate arbitrarily large input values and arbitrarily long runs of zeros. In practice, this means that changes in the dynamic range or size of the input data set would not require a change to the compressor. The algorithm has been tested in computational experiments on test images. A comparison with a previously developed algorithm that uses large code tables (generated via Huffman coding on training data) suggests that the data-compression effectiveness of the present algorithm is comparable to the best performance achievable by the previously developed algorithm.

Kiely, Aaron↗
NASA NTRS1992

Adaptive Vector-Quantization Scheme

Adaptive vector-quantization scheme provides for rapid encoding of signals for transmission in compressed form and for rapid decoding at receiver. Based on simple heuristic "move-to-front" protocol effecting lossless compression of high-rate textual data. Audio, video, or other signals compressed efficiently.

Cheung, Kar-Ming↗
DOE OSTI2023

Black-box statistical prediction of lossy compression ratios for scientific data

Lossy compressors are increasingly adopted in scientific research, tackling volumes of data from experiments or parallel numerical simulations and facilitating data storage and movement. In contrast with the notion of entropy in lossless compression, no theoretical or data-based quantification of lossy compressibility exists for scientific data. Users rely on trial and error to assess lossy compression performance. As a strong data-driven effort toward quantifying lossy compressibility of scientific datasets, we provide a statistical framework to predict compression ratios of lossy compressors. Our method is a two-step framework where (i) compressor-agnostic predictors are computed and (ii) statistical prediction models relying on these predictors are trained on observed compression ratios. Proposed predictors exploit spatial correlations and notions of entropy and lossyness via the quantized entropy. We study 8+ compressors on 6 scientific datasets and achieve a median percentage prediction error less than 12%, which is substantially smaller than that of other methods while achieving at least a 8.8× speedup for searching for a specific compression ratio and 7.8× speedup for determining the best compressor out of a collection.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2022

A lightweight, user-configurable detector ASIC digital architecture with on-chip data compression for MHz X-ray coherent diffraction imaging

Today, most X-ray pixel detectors used at light sources transmit raw pixel data off the detector ASIC. With the availability of more advanced ASIC technology nodes for scientific application, more digital functionalities from the computing domains (e.g., compression) can be integrated directly into a detector ASIC to increase data velocity. In this paper, we describe a lightweight, user-configurable detector ASIC digital architecture with on-chip compression which can be implemented in 130 nm technologies in a reasonable area on the ASIC periphery. In addition, we present a design to efficiently handle the variable data from the stream of parallel compressors. The architecture includes user-selectable lossy and lossless compression blocks. The impact of lossy compression algorithms is evaluated on simulated and experimental X-ray ptychography datasets. This architecture is a practical approach to increase pixel detector frame rates towards the continuous 1 MHz regime for not only coherent imaging techniques such as ptychography, but also for other diffraction techniques at X-ray light sources.

47 OTHER INSTRUMENTATION↗
NASA NTRS2010

Optimal Compression of Floating-Point Astronomical Images Without Significant Loss of Information

We describe a compression method for floating-point astronomical images that gives compression ratios of 6 - 10 while still preserving the scientifically important information in the image. The pixel values are first preprocessed by quantizing them into scaled integer intensity levels, which removes some of the uncompressible noise in the image. The integers are then losslessly compressed using the fast and efficient Rice algorithm and stored in a portable FITS format file. Quantizing an image more coarsely gives greater image compression, but it also increases the noise and degrades the precision of the photometric and astrometric measurements in the quantized image. Dithering the pixel values during the quantization process greatly improves the precision of measurements in the more coarsely quantized images. We perform a series of experiments on both synthetic and real astronomical CCD images to quantitatively demonstrate that the magnitudes and positions of stars in the quantized images can be measured with the predicted amount of precision. In order to encourage wider use of these image compression methods, we have made available a pair of general-purpose image compression programs, called fpack and funpack, which can be used to compress any FITS format image.

Pence, William D.↗
NASA NTRS1996

DCTune Perceptual Optimization of Compressed Dental X-Rays

In current dental practice, x-rays of completed dental work are often sent to the insurer for verification. It is faster and cheaper to transmit instead digital scans of the x-rays. Further economies result if the images are sent in compressed form. DCTune is a technology for optimizing DCT (digital communication technology) quantization matrices to yield maximum perceptual quality for a given bit-rate, or minimum bit-rate for a given perceptual quality. Perceptual optimization of DCT color quantization matrices. In addition, the technology provides a means of setting the perceptual quality of compressed imagery in a systematic way. The purpose of this research was, with respect to dental x-rays, 1) to verify the advantage of DCTune over standard JPEG (Joint Photographic Experts Group), 2) to verify the quality control feature of DCTune, and 3) to discover regularities in the optimized matrices of a set of images. We optimized matrices for a total of 20 images at two resolutions (150 and 300 dpi) and four bit-rates (0.25, 0.5, 0.75, 1.0 bits/pixel), and examined structural regularities in the resulting matrices. We also conducted psychophysical studies (1) to discover the DCTune quality level at which the images became 'visually lossless,' and (2) to rate the relative quality of DCTune and standard JPEG images at various bitrates. Results include: (1) At both resolutions, DCTune quality is a linear function of bit-rate. (2) DCTune quantization matrices for all images at all bitrates and resolutions are modeled well by an inverse Gaussian, with parameters of amplitude and width. (3) As bit-rate is varied, optimal values of both amplitude and width covary in an approximately linear fashion. (4) Both amplitude and width vary in systematic and orderly fashion with either bit-rate or DCTune quality; simple mathematical functions serve to describe these relationships. (5) In going from 150 to 300 dpi, amplitude parameters are substantially lower and widths larger at corresponding bit-rates or qualities. (6) Visually lossless compression occurs at a DCTune quality value of about 1. (7) At 0.25 bits/pixel, comparative ratings give DCTune a substantial advantage over standard JPEG. As visually lossless bit-rates are approached, this advantage of necessity diminishes. We have concluded that DCTune optimized quantization matrices provide better visual quality than standard JPEG. Meaningful quality levels may be specified by means of the DCTune metric. Optimized matrices are very similar across the class of dental x-rays, suggesting the possibility of a 'class-optimal' matrix. DCTune technology appears to provide some value in the context of compressed dental x-rays.

Watson, Andrew B.↗
NASA NTRS1989

Data compression experiments with LANDSAT thematic mapper and Nimbus-7 coastal zone color scanner data

A case study is presented where an image segmentation based compression technique is applied to LANDSAT Thematic Mapper (TM) and Nimbus-7 Coastal Zone Color Scanner (CZCS) data. The compression technique, called Spatially Constrained Clustering (SCC), can be regarded as an adaptive vector quantization approach. The SCC can be applied to either single or multiple spectral bands of image data. The segmented image resulting from SCC is encoded in small rectangular blocks, with the codebook varying from block to block. Lossless compression potential (LDP) of sample TM and CZCS images are evaluated. For the TM test image, the LCP is 2.79. For the CZCS test image the LCP is 1.89, even though when only a cloud-free section of the image is considered the LCP increases to 3.48. Examples of compressed images are shown at several compression ratios ranging from 4 to 15. In the case of TM data, the compressed data are classified using the Bayes' classifier. The results show an improvement in the similarity between the classification results and ground truth when compressed data are used, thus showing that compression is, in fact, a useful first step in the analysis.

Tilton, James C.↗
NASA NTRS1993

Transform coding for space applications

Data compression coding requirements for aerospace applications differ somewhat from the compression requirements for entertainment systems. On the one hand, entertainment applications are bit rate driven with the goal of getting the best quality possible with a given bandwidth. Science applications are quality driven with the goal of getting the lowest bit rate for a given level of reconstruction quality. In the past, the required quality level has been nothing less than perfect allowing only the use of lossless compression methods (if that). With the advent of better, faster, cheaper missions, an opportunity has arisen for lossy data compression methods to find a use in science applications as requirements for perfect quality reconstruction runs into cost constraints. This paper presents a review of the data compression problem from the space application perspective. Transform coding techniques are described and some simple, integer transforms are presented. The application of these transforms to space-based data compression problems is discussed. Integer transforms have an advantage over conventional transforms in computational complexity. Space applications are different from broadcast or entertainment in that it is desirable to have a simple encoder (in space) and tolerate a more complicated decoder (on the ground) rather than vice versa. Energy compaction with new transforms are compared with the Walsh-Hadamard (WHT), Discrete Cosine (DCT), and Integer Cosine (ICT) transforms.

Glover, Daniel↗
DOE OSTI2023

Progress toward Accelogic compression in ROOT

For the last 7 years, Accelogic pioneered and perfected a radically new theory of numerical computing codenamed “Compressive Computing”, which has an extremely profound impact on real-world computer science [1]. At the core of this new theory is the discovery of one of its fundamental theorems which states that, under very general conditions, the vast majority (typically between 70% and 80%) of the bits used in modern large-scale numerical computations are absolutely irrelevant for the accuracy of the end result. This theory of Compressive Computing provides mechanisms able to identify (with high intelligence and surgical accuracy) the number of bits (i.e., the precision) that can be used to represent numbers without affecting the substance of the end results, as they are computed and vary in real time. The bottom-line outcome will be to provide state-of-the-art compression algorithms --and accompanying software libraries-- able to surpass the performance of the compression engines currently available in the ROOT [7] framework. The resulting technology has the capability to enable substantial economic and operational gains (including speedup) for High Energy and Nuclear Physics data storage/analysis. In our initial studies, a factor of nearly x4 (3.9) compression was achieved with RHIC/STAR data where ROOT compression managed only x1.4 [6].As a collaboration of experimental scientists, private industry, and the ROOT Team, our aim is to capitalize on the substantial success delivered by the initial effort and produce a robust technology properly packaged as an open-source tool that could be used by virtually every experiment around the world as means for improving data management and accessibility.In this contribution, we will present our efforts integrating our concepts of “functionally lossless compression” within the ROOT framework implementation, with the purpose of producing a basic solution readily integrated into HENP applications. We will also present our progress applying this compression through realistic examples of analysis from both the STAR and CMS experiments.

Canal, Ph.↗
NASA NTRS2013

Effects of Tunable Data Compression on Geophysical Products Retrieved from Surface Radar Observations with Applications to Spaceborne Meteorological Radars

This paper presents results and analyses of applying an international space data compression standard to weather radar measurements that can easily span 8 orders of magnitude and typically require a large storage capacity as well as significant bandwidth for transmission. By varying the degree of the data compression, we analyzed the non-linear response of models that relate measured radar reflectivity and/or Doppler spectra to the moments and properties of the particle size distribution characterizing clouds and precipitation. Preliminary results for the meteorologically important phenomena of clouds and light rain indicate that for a 0.5 dB calibration uncertainty, typical for the ground-based pulsed-Doppler 94 GHz (or 3.2 mm, W-band) weather radar used as a proxy for spaceborne radar in this study, a lossless compression ratio of only 1.2 is achievable. However, further analyses of the non-linear response of various models of rainfall rate, liquid water content and median volume diameter show that a lossy data compression ratio exceeding 15 is realizable. The exploratory analyses presented are relevant to future satellite missions, where the transmission bandwidth is premium and storage requirements of vast volumes of data, potentially problematic.

cloud properties↗
NASA NTRS2012

Real-Time Adaptive Lossless Hyperspectral Image Compression using CCSDS on Parallel GPGPU and Multicore Processor Systems

The proposed CCSDS (Consultative Committee for Space Data Systems) Lossless Hyperspectral Image Compression Algorithm was designed to facilitate a fast hardware implementation. This paper analyses that algorithm with regard to available parallelism and describes fast parallel implementations in software for GPGPU and Multicore CPU architectures. We show that careful software implementation, using hardware acceleration in the form of GPGPUs or even just multicore processors, can exceed the performance of existing hardware and software implementations by up to 11x and break the real-time barrier for the first time for a typical test application.

realtime↗
DOE OSTI2025

HPDR: High-Performance Portable Scientific Data Reduction Framework

The rapid growth in scientific data generation is outpacing advancements in computing systems necessary for efficient storage, transfer, and analysis, particularly in the context of exascale computing. With the deployment of first-generation exascale computing systems and next-generation experimental facilities, this gap is widening and necessitates effective data reduction techniques to manage enormous data volumes. Over the past decade, various data reduction methods, including lossless compression, error-controlled lossy compression, and data refactoring, have been developed to accelerate I/O in scientific workflows. Despite significant reductions in data volume, these methods introduce considerable computational overhead, which can become the new bottleneck in data processing. To mitigate this, GPU-accelerated data reduction algorithms have been introduced. However, challenges remain in their integration into exascale workflows, including limited portability across different GPU architectures, substantial memory transfer overhead, and reduced scalability on dense multi-GPU systems. To address these challenges, we propose HPDR, a high-performance and portable data reduction framework. HPDR is designed to enable the execution of state-of-the-art reduction algorithms across diverse processor architectures while reducing memory transfer overhead to 2.3 % of the original, resulting in up to 3.5× faster throughput compared to existing solutions. It also achieves up to 96% of the theoretical speedup in multi-GPU settings. In addition, evaluations on accelerating I/O operations at scale up to 1,024 nodes of the Frontier supercomputer demonstrate that HPDR can achieve up to 103 TB/s reduction throughput, providing up to 4× acceleration in parallel I/O performance compared to existing data reduction routines. This work highlights the potential of HPDR to significantly enhance data reduction efficiency in exascale computing environments.

Chen, Jieyang [University of Oregon]↗