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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 73 records · Page 4
All sourcesNASA NTRSDOE OSTI
DOE OSTI2022

Updraft dynamics and microphysics: on the added value of the cumulus thermal reference frame in simulations of aerosol–deep convection interactions

One fundamental question about atmospheric moist convection processes that remains debated is whether, or under which conditions, a relevant variability in background aerosol concentrations may have a significant dynamical impact on convective clouds and their associated precipitation. Furthermore, current climate models must parameterize both the microphysical and the cumulus convection processes, but this is usually implemented separately, whereas in nature there is a strong coupling between them. As a first step to improve our understanding of these two problems, we investigate how aerosol concentrations modify key properties of updrafts in eight large-eddy-permitting regional simulations of a case study of scattered convection over Houston, Texas, in which convection is explicitly simulated and microphysical processes are parameterized. Dynamical and liquid-phase microphysical responses are investigated using the following two different reference frames: static cloudy updraft grid cells versus tracked cumulus thermals. In both frameworks, we observe the expected microphysical responses to higher aerosol concentrations, such as higher cloud number concentrations and lower rain number concentrations. In terms of the dynamical responses, both frameworks indicate weak impacts of varying aerosol concentrations relative to the noise between simulations over the observationally derived range of aerosol variability for this case study. On the other hand, results suggest that thermals are more selective than cloudy updraft grid cells in terms of sampling the most active convective air masses. For instance, vertical velocity from thermals is significantly higher at upper levels than when sampled from cloudy updraft grid points, and several microphysical variables have higher average values in the cumulus thermal framework than in the cloudy updraft framework. In addition, the thermal analysis is seen to add rich quantitative information about the rates and covariability of microphysical processes spatially and throughout tracked thermal lifecycles, which can serve as a stronger foundation for improving subgrid-scale parameterizations.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2019

MCNP AND CFD MODELING OF A SODIUM FAST REACTOR SUB-ASSEMBLY CHANNEL TO CAPTURE LOCALIZED TEMPERATURE PEAKING

Typical evaluation tools for sodium-cooled fast reactors (SFR) use simplified neutronic/thermal models to efficiently compute the power and temperature distributions within the core. However, their modeling capability can be limited in extreme cases such as when sharp inter-assembly power gradients occur, or for non-standard SFR assembly geometries. Higher fidelity tools that rely on Monte Carlo methods for neutron transport, and Computational Fluid Dynamics (CFD) for thermal analysis, are better suited in these instances. The higher accuracy comes at the cost of higher computational expense. MCNP and STAR CCM+ were selected for this analysis. While MCNP is capable of generating pin-level power distributions for a whole-core SFR model, it is prohibitively expensive to then conduct CFD analysis for every single assembly. A semi-empirical model was therefore developed to rapidly estimate pin temperature distributions throughout the whole core. It relies on a geometric correction factor for turbulent flow-mixing. The correction factor is obtained from a CFD simulation of a single fuel assembly with a uniform power distribution and an adiabatic boundary condition. Without using CFD, each sub-channel outlet temperature is calculated separately using 1-D heat-balance and Nusselt number correlations and the MCNP calculated pin-powers. The rudimentary 1-D model is then corrected for the flow-mixing effect based on the CFD data. The temperature calculation is performed by a code written in the Python language called CFD Monte-Carlo Developed Reconstruction of Sub-channel at a Quasi-Representative Level (CMDR-SQRL). CMDR-SQRL was shown to adequately predict CFD evaluated temperature distribution for a wide range of SFR configurations, including an extreme case with fuel assemblies nearby containing moderating material. The agreement demonstrates how geometric and power-driven effects can be decoupled within an SFR assembly. CMDR-SQRL is intended to be mainly used for scoping studies to provide core-wide evaluations efficiently.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗
DOE OSTI2018

Vitrification of High-Level Waste: how to Select the Best Suited Technology - 18117

Since more than 30 years now, a number of countries have selected and operated vitrification as the best industrial practice for safely and durably immobilizing the most active liquid waste. This now significant worldwide experience covers a wide range of waste compositions, from concentrated alkaline defense waste sludges with a variety of salts and chemicals (Na, Fe, Al, Cr, sulphate,... ) to relatively clear acidic HLLW from commercial, low salt, PUREX-type processes, waste that include dissolved cladding material (Al, Mg, stainless steel), waste that include high levels of noble metals and fines... The activity levels vary from 40- year old defense waste to relatively young waste from high burn-up commercial fuel. The current throughputs vary from about 5 kg/h of glass to about 90 kg/h of glass per melter. Even higher throughputs are currently being considered for Hanford facility for instance. In order to cope with the range of waste compositions, glass compositions have also evolved from low melting temperature borosilicate or phosphate glass to glass or glass ceramics with higher melting temperatures. More complex matrices are currently under study in a number of countries, to immobilize more complex waste and / or increase waste loadings. Each challenge is unique and, for each challenge, it is necessary to select the best combination of waste form and technology. For instance for very active solutions with high levels of noble metal particles that could settle, increase apparent glass viscosity, and impact electrical conductivity, one would select borosilicate glass in the mechanically-stirred hot wall induction melter with bottom pouring that has proven its efficiency in industrial conditions at La Hague. For high glass throughputs with low solids in a borosilicate melt (typically Defense waste), ceramic melters have proven their reliability and efficiency. For matrices that need higher temperatures, or with very high corrosiveness, Cold-Crucible Induction Melters are now considered, with one first industrial implementation at La Hague to produce borosilicate glass and a glass-ceramic. All these technologies have been improved over the years to increase throughput, waste loading, melting temperature, reliability... Other types of waste are now being studied worldwide, and for each, it is necessary to carefully select the adapted waste form and technology. The technologies studied will range from traditional technologies (such as hot-wall induction melter technology and liquid-fed ceramic melter technologies) to the more recent advanced technologies (such as Cold Crucible Induction Melter or Advanced Ceramic melters). In addition, the field of vitrification is extending to other types of waste; the current advances in this field will also be described. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗
DOE OSTI2026

Segmentation method comparison for residual fiber length measurement across tiled microscopy images

Fiber length distribution (FLD), in part, governs mechanical properties in discontinuous fiber composites, yet manual measurement methods limit the high-throughput characterization needed for materials design optimization. This study compares deep learning segmentation approaches for automated FLD measurement in large-field microscopy, evaluating how method choice affects the microstructural descriptors used in structure-property-processing relationships. A critical challenge is that high-resolution microscopy images (10,000×10,000 pixels) must be tiled for deep learning analysis, fragmenting fibers at boundaries. We demonstrate that segmentation method proves crucial for measurement accuracy. For example, instance segmentation with Slicing Aided Hyper Inference (SAHI) preserves individual fiber integrity across tiles while semantic segmentation prioritizes speed. Comparing against manual measurement of extracted carbon fibers, YOLOv11-SAHI matched manual ground truth (238 μm weighted mean) with 40x speedup (4.5 vs 167 minutes per image). U-Net provides rapid quantification although it is at the cost of reduced accuracy due only reliably measuring stand-alone fibers. Our comparative analysis reveals that instance segmentation with SAHI better preserves length measurements while semantic segmentation prioritizes speed, providing empirical guidance for method selection. The characterization provides essential inputs for mechanical property prediction models and inverse design workflows, accelerating composite materials development cycles.

Additive manufacturing↗
DOE OSTI2025

DNABERT-S: pioneering species differentiation with species-aware DNA embeddings

SUMMARY: We introduce DNABERT-S, a tailored genome model that develops species-aware embeddings to naturally cluster and segregate DNA sequences of different species in the embedding space. Differentiating species from genomic sequences (i.e. DNA and RNA) is vital yet challenging, since many real-world species remain uncharacterized, lacking known genomes for reference. Embedding-based methods are therefore used to differentiate species in an unsupervised manner. DNABERT-S builds upon a pre-trained genome foundation model named DNABERT-2. To encourage effective embeddings to error-prone long-read DNA sequences, we introduce Manifold Instance Mixup (MI-Mix), a contrastive objective that mixes the hidden representations of DNA sequences at randomly selected layers and trains the model to recognize and differentiate these mixed proportions at the output layer. We further enhance it with the proposed Curriculum Contrastive Learning (C2LR) strategy. Empirical results on 28 diverse datasets show DNABERT-S's effectiveness, especially in realistic label-scarce scenarios. For example, it identifies twice more species from a mixture of unlabeled genomic sequences, doubles the Adjusted Rand Index (ARI) in species clustering, and outperforms the top baseline's performance in 10-shot species classification with just a 2-shot training. AVAILABILITY AND IMPLEMENTATION: Model, codes, and data are publically available at https://github.com/MAGICS-LAB/DNABERT_S.

Zhou, Zhihan↗
DOE OSTI2021

Microbial Biomass in Soils Receiving Varying Levels of Organic Inputs - A Data Compilation

This dataset contains soil microbial biomass data compiled from published laboratory studies and field manipulations of organic inputs to soils. Each study included at least three levels of a given type of organic input applied to a given type of soil. Studies were selected from the literature that had experimentally manipulated organic input rates to soils using unburned, non-synthetic material (e.g. plant litters, manures, and composts). Fifty-five (55) studies, conducted from 1997 to October 2019, were chosen and compiled into a dataset with 358 observations from 96 combinations of a given organic material applied to a given soil in agricultural systems, laboratory incubations, forests, or grasslands. • Studies were selected when biomass measurements used the chloroform fumigation-extraction procedure followed by carbon analysis, or, in two instances, studies estimated microbial biomass using phospholipid fatty acid analysis. • Studies that used fewer than three input rates or characterized microbial biomass via substrate induced respiration were excluded. • The temporal and spatial aspects of the laboratory and field studies were not essential to the analyses (Craig et al., 2021) and were not included with the measurement data. These data were used to assess the relationship between organic input amounts and microbial biomass. Complete reference citations are provided if additional information is needed. The compiled data are provided in two .csv files: (1) soil treatments and microbial biomass data and (2) literature citations. The “Study” field is the cross reference between files. Also provided is the R code for reproducing the results in the related publication.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2019

Integrating Interactive Jupyter Notebooks at the BNL SDCC

At the SDCC we are deploying a Jupyterhub infrastructure to enable scientists from multiple disciplines to access our diverse compute and storage resources. One major design goal was to avoid rolling out yet another compute backend, but rather to leverage our pre-existing resources via our batch systems (HTCondor and Slurm). Challenges faced include creating a frontend that allows users to choose what HPC resources they have access to as well as selecting containers or environments, delegating authentication to a MFA-enabled proxy, and automating deployment of multiple hub instances. This paper covers the design and features of our Jupyterhub service.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
DOE OSTI2021

Carbon fiber synthesis from pitch: Insights from ReaxFF based molecular dynamics simulations

Despite the potential to lowering fabrication costs of pitch-based carbon fiber (CF) compared to polyacrylonitrile-based CF, large scale utilization is currently limited by the complexity in manufacturing. This is mainly due to the lack of consistency between the pitch structure/chemistry and CF properties under different processing conditions. Here, we employed full atomistic simulations based on reactive force fields to investigate the conversion of pitch precursors to CFs. Additionally, it was found that at the carbonization stage, the consumption rates of precursors, gas formations, and solid yields (carbonized CFs) are all dependent on the composition and arrangement of molecular moieties in the precursor. Specifically, precursors with sp 3 carbons in the cata-condensed core area have limited decomposition pathways (i.e., limited reaction sites), which leads to the formation of carbonized CFs with similar compositions. Furthermore, carbonized CFs possess distinct structural characteristics, and finally lead to the formation of CFs with different moduli. By analyzing CF crystallinity and elemental composition, general rationales are proposed for the selection of optimal precursors and processing conditions, and thus shed lights on parameter screening during industrial CF synthesis. For instance, inclusion of sp 3 carbons in cata- condensed rings can be preferred over the presence of sp 3 carbons on side chains.

01 COAL, LIGNITE, AND PEAT↗
DOE OSTI2018

Annotation of the Corymbia terpene synthase gene family shows broad conservation but dynamic evolution of physical clusters relative to Eucalyptus

Terpenes are economically and ecologically important phytochemicals. Their synthesis is controlled by the terpene synthase (TPS) gene family, which is highly diversified throughout the plant kingdom. The plant family Myrtaceae are characterised by especially high terpene concentrations, and considerable variation in terpene profiles. Many Myrtaceae are grown commercially for terpene products including the eucalypts Corymbia and Eucalyptus. Eucalyptus grandis has the largest TPS gene family of plants currently sequenced, which is largely conserved in the closely related E. globulus. However, the TPS gene family has been well studied only in these two eucalypt species. The recent assembly of two Corymbia citriodora subsp. variegata genomes presents an opportunity to examine the conservation of this important gene family across more divergent eucalypt lineages. Manual annotation of the TPS gene family in C. citriodora subsp. variegata revealed a similar overall number, and relative subfamily representation, to that previously reported in E. grandis and E. globulus. Many of the TPS genes were in physical clusters that varied considerably between Eucalyptus and Corymbia, with several instances of translocation, expansion/contraction and loss. Notably, there was greater conservation in the subfamilies involved in primary metabolism than those involved in secondary metabolism, likely reflecting different selective constraints. The variation in cluster size within subfamilies and the broad conservation between the eucalypts in the face of this variation are discussed, highlighting the potential contribution of selection, concerted evolution and stochastic processes. Finally, these findings provide the foundation to better understand terpene evolution within the ecologically and economically important Myrtaceae.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2019

New Tabu Algorithm for Positioning Mining Drillholes with Blocks Uncertainty

This paper proposes a new approach to the mining exploration drillholes positioning problem (DPP) that incorporates both geostatistical and optimization techniques. A metaheuristic was developed to solve the DPP taking into account an uncertainty index that quantifies the reliability of the current interpretation of the mineral deposit. The uncertainty index was calculated from multiple deposit realizations obtained by truncated Gaussian simulations conditional to the available drillholes samplings. A linear programming model was defined to select the subset of future drillholes that maximizes coverage of the uncertainty. A Tabu Search algorithm was developed to solve large instances of this set partitioning problem. The proposed Tabu Search algorithm is shown to provide good quality solutions approaching 95% of the optimal solution in a reasonable computing time, allowing close to optimal coverage of uncertainty for a fixed investment in drilling.

58 GEOSCIENCES↗
DOE OSTI2019

Transmission Constraint Filtering in Large-Scale Security-Constrained Unit Commitment

When solving the security-constrained unit commitment problem, one of the most complicating factors is handling the large number of transmission constraints, corresponding to both base case and N - 1 line contingency scenarios. Although it is well known that only a few of these constraints need to be enforced, identifying this critical subset of constraints efficiently remains a challenge. In this letter, we propose a novel and simple iterative contingency-screening procedure that is able to eliminate 99.4% of the constraints selected by existing iterative methods, allowing for the solution of much larger-scale problems. We report computational results in realistic instances with up to 6468 buses and 9000 transmission lines. Furthermore, the method was also independently implemented and evaluated at MISO, where it performed faster than alternative methods.

24 POWER TRANSMISSION AND DISTRIBUTION↗
DOE OSTI2019

Failure Formulations in Modular Plasticity Models

Computational prediction of ductile failure remains a challenging and important problem as demonstrated by the recent Sandia Fracture Challenges. In addition to emphasizing the complexity of such problems, the variety of solution strategies also highlighted the number of possible approaches to this problem. A common engineering approach for such efforts is to use a failure model in conjunction with element deletion. In the second Sandia Fracture Challenge, for instance, nine of the fourteen teams used some form of element deletion. For such schemes, a critical decision pertains to the selection of the appropriate failure model; of which many may be found in the literature (see the review of Corona and Reedlunn). The variety may also be observed in the aforementioned second Sandia Fracture Challenge in which at least eight different failure criteria are listed for the nine element deletion based approaches. The selection of the appropriate failure model is a difficult challenge depending on the material being considered and such criteria can variously depend on stress state (i.e. triaxiality, Lode angle) and loading conditions (i.e. strain rate, temperature). Separate implementations of each criteria with different plasticity models can be a repetitive and cumbersome process which may limit available models for an engineering analyst. To mitigate this issue, an effort was pursued to flexibly implement failure models in which different failure models could be specified and utilized within the same elastic-plastic constitutive routine by simply changing the input syntax. Similarly, the same models are implemented across a suite of elastic-plastic formulations enabling consistent definitions. As will be discussed later, a specific "modular failure" model is also implemented which allows for the selection or specification of different dependencies depending on the current need. At this stage, this effort is limited to defining failure models; progression/damage evolution in the constitutive model is not treated and left to future efforts.

42 ENGINEERING↗
DOE OSTI2019

Non-contact temperature control system for microfluidic devices

The present invention relates to a temperature control system for a microfluidic device. The system allows for non-contact heating by employing an infrared emitter. In some instances, the system can be used in conjunction with a centrifugal microfluidic device. Optionally, a mask can be implemented to provide selective heating of desired assay areas of the device.

Phaneuf, Christopher↗
DOE OSTI2021

Protein and nucleic acid detection for microfluidic devices

The present invention relates to methods for detecting targets by employing a temperature control system with a microfluidic device. The system allows for non-contact heating by employing an infrared emitter. In some instances, the system can be used in conjunction with a centrifugal microfluidic device. Optionally, a mask can be implemented to provide selective heating of desired assay areas of the device.

Koh, Chung-Yan↗
DOE OSTI2025

Ultrafast Spectroscopy and Dynamics of Photoredox Catalysis

Photoredox catalysis has emerged as a powerful platform for chemical synthesis, utilizing chromophore excited states as selective energy stores to surmount chemical activation barriers toward making desirable products. Developments in this field have pushed synthetic chemists to design and discover new photocatalysts with novel and impactful photoreactivity but also with uncharacterized excited states and only an approximate mechanistic understanding. This review highlights specific instances in which ultrafast spectroscopies dissected the photophysical and photochemical dynamics of new classes of photoredox catalysts and their photochemical reactions. After briefly introducing the photophysical processes and ultrafast spectroscopic methods central to this topic, the review describes selected recent examples that evoke distinct classes of photoredox catalysts with demonstrated synthetic utility and ultrafast spectroscopic characterization. Furthermore, this review cements the significant role of ultrafast spectroscopy in modern photocatalyzed organic transformations and institutionalizes the developing intersection of synthetic organic chemistry and physical chemistry.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2020

Root identification in minirhizotron imagery with multiple instance learning

In this study, multiple instance learning (MIL) algorithms to automatically perform root detection and segmentation in minirhizotron imagery using only image-level labels are proposed. Root and soil characteristics vary from location to location, and thus, supervised machine learning approaches that are trained with local data provide the best ability to identify and segment roots in minirhizotron imagery. However, labeling roots for training data (or otherwise) is an extremely tedious and time-consuming task. This paper aims to address this problem by labeling data at the image level (rather than the individual root or root pixel level) and train algorithms to perform individual root pixel level segmentation using MIL strategies. Three MIL methods (multiple instance adaptive cosine coherence estimator, multiple instance support vector machine, multiple instance learning with randomized trees) were applied to root detection and compared to non-MIL approaches. The results show that MIL methods improve root segmentation in challenging minirhizotron imagery and reduce the labeling burden. In our results, multiple instance support vector machine outperformed other methods. The multiple instance adaptive cosine coherence estimator algorithm was a close second with an added advantage that it learned an interpretable root signature which identified the traits used to distinguish roots from soil and did not require parameter selection.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2022

Quantum model learning agent: characterisation of quantum systems through machine learning

Accurate models of real quantum systems are important for investigating their behaviour, yet are difficult to distil empirically. Here, we report an algorithm—the quantum model learning agent (QMLA)—to reverse engineer Hamiltonian descriptions of a target system. We test the performance of QMLA on a number of simulated experiments, demonstrating several mechanisms for the design of candidate Hamiltonian models and simultaneously entertaining numerous hypotheses about the nature of the physical interactions governing the system under study. QMLA is shown to identify the true model in the majority of instances, when provided with limited a priori information, and control of the experimental setup. Our protocol can explore Ising, Heisenberg and Hubbard families of models in parallel, reliably identifying the family which best describes the system dynamics. We demonstrate QMLA operating on large model spaces by incorporating a genetic algorithm to formulate new hypothetical models. The selection of models whose features propagate to the next generation is based upon an objective function inspired by the Elo rating scheme, typically used to rate competitors in games such as chess and football. In all instances, our protocol finds models that exhibit F 1 score ≥ 0.88 when compared with the true model, and it precisely identifies the true model in 72% of cases, whilst exploring a space of over 250 000 potential models. By testing which interactions actually occur in the target system, QMLA is a viable tool for both the exploration of fundamental physics and the characterisation and calibration of quantum devices.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2022

Requirements for Cataloging Hanford Geophysical Datasets

Environmental management activities at the Hanford Site produce extensive data about site conditions, contaminants, cleanup, and more. Managing and archiving that data requires a high degree of collaboration among site contractors and a high level of awareness by project managers and staff. Part of that effort is developing a Hanford Environmental Information and Data Index (HEIDI) to organize the data and maximize its value by making it findable and available for reuse. The objective is to catalog the disparate data sets collected to address the evolving needs of planning, executing, and documenting cleanup over several decades up to the present day, including links to active data sources when available. A properly implemented data catalog makes finding environmental datasets related to an area or theme a routine, reliable process, without requiring the searcher to have special knowledge that a data set exists and where it may be stored. In this project, a working group, including the U.S. Department of Energy, the Hanford Site contractors, and Pacific Northwest National Laboratory staff, identified needs and requirements for handling complex site data. Geophysical data was chosen as a test case because it can be large and complex and often involves multiple processing steps to extract the information incorporated into deliverables. The ability to document those steps was one of the requirements identified for the catalog. In addition to developing requirements, other activities included selecting a metadata schema and initial testing with the objective of determining whether the workflow and capabilities of selected data catalog software platforms were sufficient to implement and impose the identified requirements. This initial testing involved running the default catalog instance using the software platform of interest and altering the configuration to achieve each requirement, if possible. Where configuration alone was insufficient, the possibility of modifying the software by changing the code was examined, but not implemented. A follow-on task is planned to reprogram the code as necessary to implement requirements in a prototype catalog.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗