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Soil Salinity Level Assessment and Prediction Integrating UAV-borne Hyperspectral Imaging and Machine Learning Algorithms to Combat Desertification

In response to the ongoing global food crisis, the United Nations has identified “Zero Hunger” as one of its Sustainable Development Goals. A central contributor to the crisis is the process in which agricultural lands go through desertification. Research has shown a direct correlation between soil salinity and desertification - increased salinity levels indicate a higher risk for desertification. Furthermore, researchers have explored various techniques to map soil salinity, but these methods are oftentimes inefficient and don’t address future salinity predictions. To improve desertification monitoring, soil salinity can be observed via hyperspectral imaging on unmanned aerial vehicles (UAVs) to predict the risk of agricultural desertification using artificial intelligence (AI) and machine learning (ML) techniques. A significant gap exists in past research that applies ML and imaging techniques to soil salinity: convolutional neural networks (CNNs) and regression models are rarely leveraged together, despite the efficiency and accuracy of these models. To compensate for this gap, the proposed system leverages the use of these AI and ML models to improve soil assessment and prediction techniques. This approach involves three steps - data collection, image analysis, and future prediction. Using hyperspectral cameras on UAVs to collect the data from the region, a trained CNN model will output estimated soil salinity levels at a specific time. The estimations will then be analyzed by a regression model to assess the accuracy of future soil salinity predictions. The proposed system will identify regions at risk of desertification to help farmers mitigate agricultural loss, in turn helping alleviate the food crisis.

UAV systems↗

Visible-Infrared Hyperspectral Image Projector

The VisIR HIP generates spatially-spectrally complex scenes. The generated scenes simulate real-world targets viewed by various remote sensing instruments. The VisIR HIP consists of two subsystems: a spectral engine and a spatial engine. The spectral engine generates spectrally complex uniform illumination that spans the wavelength range between 380 nm and 1,600 nm. The spatial engine generates two-dimensional gray-scale scenes. When combined, the two engines are capable of producing two-dimensional scenes with a unique spectrum at each pixel. The VisIR HIP can be used to calibrate any spectrally sensitive remote-sensing instrument. Tests were conducted on the Wide-field Imaging Interferometer Testbed at NASA s Goddard Space Flight Center. The device is a variation of the calibrated hyperspectral image projector developed by the National Institute of Standards and Technology in Gaithersburg, MD. It uses Gooch & Housego Visible and Infrared OL490 Agile Light Sources to generate arbitrary spectra. The two light sources are coupled to a digital light processing (DLP(TradeMark)) digital mirror device (DMD) that serves as the spatial engine. Scenes are displayed on the DMD synchronously with desired spectrum. Scene/spectrum combinations are displayed in rapid succession, over time intervals that are short compared to the integration time of the system under test.

Bolcar, Matthew↗

Sparse Superpixel Unmixing for Exploratory Analysis of CRISM Hyperspectral Images

Fast automated analysis of hyperspectral imagery can inform observation planning and tactical decisions during planetary exploration. Products such as mineralogical maps can focus analysts' attention on areas of interest and assist data mining in large hyperspectral catalogs. In this work, sparse spectral unmixing drafts mineral abundance maps with Compact Reconnaissance Imaging Spectrometer (CRISM) images from the Mars Reconnaissance Orbiter. We demonstrate a novel "superpixel" segmentation strategy enabling efficient unmixing in an interactive session. Tests correlate automatic unmixing results based on redundant spectral libraries against hand-tuned summary products currently in use by CRISM researchers.

Image Segmentation↗

Radiometric Characterization of Hyperspectral Imagers using Multispectral Sensors

The Remote Sensing Group (RSG) at the University of Arizona has a long history of using ground-based test sites for the calibration of airborne and satellite based sensors. Often, ground-truth measurements at these test sites are not always successful due to weather and funding availability. Therefore, RSG has also automated ground instrument approaches and cross-calibration methods to verify the radiometric calibration of a sensor. The goal in the cross-calibration method is to transfer the calibration of a well-known sensor to that of a different sensor, This work studies the feasibility of determining the radiometric calibration of a hyperspectral imager using multispectral a imagery. The work relies on the Moderate Resolution Imaging Spectroradiometer (M0DIS) as a reference for the hyperspectral sensor Hyperion. Test sites used for comparisons are Railroad Valley in Nevada and a portion of the Libyan Desert in North Africa. Hyperion bands are compared to MODIS by band averaging Hyperion's high spectral resolution data with the relative spectral response of M0DlS. The results compare cross-calibration scenarios that differ in image acquisition coincidence, test site used for the calibration, and reference sensor. Cross-calibration results are presented that show agreement between the use of coincident and non-coincident image pairs within 2% in most brands as well as similar agreement between results that employ the different MODIS sensors as a reference.

McCorkel, Joel↗

An Active Learning Framework for Hyperspectral Image Classification Using Hierarchical Segmentation

Augmenting spectral data with spatial information for image classification has recently gained significant attention, as classification accuracy can often be improved by extracting spatial information from neighboring pixels. In this paper, we propose a new framework in which active learning (AL) and hierarchical segmentation (HSeg) are combined for spectral-spatial classification of hyperspectral images. The spatial information is extracted from a best segmentation obtained by pruning the HSeg tree using a new supervised strategy. The best segmentation is updated at each iteration of the AL process, thus taking advantage of informative labeled samples provided by the user. The proposed strategy incorporates spatial information in two ways: 1) concatenating the extracted spatial features and the original spectral features into a stacked vector and 2) extending the training set using a self-learning-based semi-supervised learning (SSL) approach. Finally, the two strategies are combined within an AL framework. The proposed framework is validated with two benchmark hyperspectral datasets. Higher classification accuracies are obtained by the proposed framework with respect to five other state-of-the-art spectral-spatial classification approaches. Moreover, the effectiveness of the proposed pruning strategy is also demonstrated relative to the approaches based on a fixed segmentation.

classification↗

Use of Machine Learning and Principal Component Analysis to Retrieve Nitrogen Dioxide (NO 2 ) With Hyperspectral Imagers and Reduce Noise in Spectral Fitting

Nitrogen dioxide (NO 2 ) is an important trace-gas pollutant and climate agent whose presence also leads to spectral interference in ocean color retrievals. NO 2 column densities have been retrieved with satellite UV–Vis spectrometers such as the Ozone Monitoring Instrument (OMI) and the Tropospheric Monitoring Instrument (TROPOMI) that typically have spectral resolutions of the order of 0.5 nm or better and spatial footprints as small as 3.6 km × 5.6 km. These NO 2 observations are used to estimate emissions, monitor pollution trends, and study effects on human health. Here, we investigate whether it is possible to retrieve NO 2 amounts with lower-spectral-resolution hyperspectral imagers such as the Ocean Color Instrument (OCI) that will fly on the Plankton, Aerosol, Cloud, ocean Ecosystem (PACE) satellite set for launch in early 2024. OCI will have a spectral resolution of 5 nm and a spatial resolution of ∼ 1 km with global coverage in 1–2 d. At this spectral resolution, small-scale spectral structure from NO 2 absorption is still present. We use real spectra from the OMI to simulate OCI spectra that are in turn used to estimate NO 2 slant column densities (SCDs) with an artificial neural network (NN) trained on target OMI retrievals. While we obtain good results with no noise added to the OCI simulated spectra, we find that the expected instrumental noise substantially degrades the OCI NO 2 retrievals. Nevertheless, the NO 2 information from OCI may be of value for ocean color retrievals. OCI retrievals can also be temporally averaged over timescales of the order of months to reduce noise and provide higher-spatial-resolution maps that may be useful for downscaling lower-spatial-resolution data provided by instruments such as OMI and TROPOMI; this downscaling could potentially enable higher-resolution emissions estimates and be useful for other applications. In addition, we show that NNs that use coefficients of leading modes of a principal component analysis of radiance spectra as inputs appear to enable noise reduction in NO 2 retrievals. Once trained, NNs can also substantially speed up NO 2 spectral fitting algorithms as applied to OMI, TROPOMI, and similar instruments that are flying or will soon fly in geostationary orbit.

NO2↗

A Near IR Fabry-Perot Interferometer for Wide Field, Low Resolution Hyperspectral Imaging on the Next Generation Space Telescope

We discuss work in progress on a near-infrared tunable bandpass filter for the Goddard baseline wide field camera concept of the Next Generation Space Telescope (NGST) Integrated Science Instrument Module (ISIM). This filter, the Demonstration Unit for Low Order Cryogenic Etalon (DULCE), is designed to demonstrate a high efficiency scanning Fabry-Perot etalon operating in interference orders 1 - 4 at 30K with a high stability DSP based servo control system. DULCE is currently the only available tunable filter for lower order cryogenic operation in the near infrared. In this application, scanning etalons will illuminate the focal plane arrays with a single order of interference to enable wide field lower resolution hyperspectral imaging over a wide range of redshifts. We discuss why tunable filters are an important instrument component in future space-based observatories.

Barry, R. K.↗

Plant Disease Detection: Exploring Applications in Hyperspectral Imaging and Machine Learning for Agriculture

The threat of crop disease on food security and agriculture is projected to escalate, leading to reduced crop yields, global economic loss, and endangered food availability to vulnerable populations. Early identification of plant disease is crucial to combatting the crisis but traditional manual methods for disease detection are laborious and may miss early signs of infection. The proposed solution suggests equipping a drone with a hyperspectral camera to collect images and analyzing the data with neural networks trained to flag and classify infected plants. This approach offers a faster, more accurate, and potentially more cost-effective alternative to current practices. While the expensive and complex nature of hyperspectral imaging (HSI) may be an obstacle to the adoption of the drone, rapidly advancing technologies compounded with rental-based usage may make these tools simpler, cheaper, and more accessible to a wider audience. The research further discusses the potential for automated flight paths and the expansion of disease detection to a broader range of crops.

plant disease detection↗

Satellite Hyperspectral Imaging Simulation

Simulation of generic pushbroom satellite hyperspectral sensors have been performed to evaluate the potential performance and validation techniques for satellite systems such as COIS(NEMO), Warfighter-1(OrbView-4) and Hyperion(EO-1). The simulations start with a generation of synthetic scenes from material maps of studied terrain. Scene-reflected radiance is corrected for atmospheric effects and convolved with sensor spectral response using MODTRAN 4 radiance and transmissions calculations. Scene images are further convolved with point spread functions derived from Optical Transfer Functions (OTF's) of the sensor system. Photon noise and etectorr/electronics noise are added to the simulated images, which are also finally quantized to the sensor bit resolution. Studied scenes include bridges and straight roads used for evaluation of sensor spatial resolution, as well as fields of minerals, vegetation and manmade materials used for evaluation of sensor radiometric response and sensitivity. The scenes are simulated with various seasons and weather conditions. Signal-to-noise ratios and expected performance are estimated for typical satellite system specifications and are discussed for all the scenes.

Zanoni, Vicki↗

AOTF Polarimetric Hyperspectral Imaging for Mine Detection.

This paper reports an analysis of polarimetric hyperspectral imagery of an outdoor scene containing a number of inactive mines. The imagery was taken with a visible/near-infrared acousto-optic tunable filter prototype system. The result has illustrated that the characteristics of mine smooth surfaces can create high signals in polarization difference images and consequently provide a quick and reliable approach for detection.

['Mine↗

Superpixel-Augmented Endmember Detection for Hyperspectral Images

Superpixels are homogeneous image regions comprised of several contiguous pixels. They are produced by shattering the image into contiguous, homogeneous regions that each cover between 20 and 100 image pixels. The segmentation aims for a many-to-one mapping from superpixels to image features; each image feature could contain several superpixels, but each superpixel occupies no more than one image feature. This conservative segmentation is relatively easy to automate in a robust fashion. Superpixel processing is related to the more general idea of improving hyperspectral analysis through spatial constraints, which can recognize subtle features at or below the level of noise by exploiting the fact that their spectral signatures are found in neighboring pixels. Recent work has explored spatial constraints for endmember extraction, showing significant advantages over techniques that ignore pixels relative positions. Methods such as AMEE (automated morphological endmember extraction) express spatial influence using fixed isometric relationships a local square window or Euclidean distance in pixel coordinates. In other words, two pixels covariances are based on their spatial proximity, but are independent of their absolute location in the scene. These isometric spatial constraints are most appropriate when spectral variation is smooth and constant over the image. Superpixels are simple to implement, efficient to compute, and are empirically effective. They can be used as a preprocessing step with any desired endmember extraction technique. Superpixels also have a solid theoretical basis in the hyperspectral linear mixing model, making them a principled approach for improving endmember extraction. Unlike existing approaches, superpixels can accommodate non-isometric covariance between image pixels (characteristic of discrete image features separated by step discontinuities). These kinds of image features are common in natural scenes. Analysts can substitute superpixels for image pixels during endmember analysis that leverages the spatial contiguity of scene features to enhance subtle spectral features. Superpixels define populations of image pixels that are independent samples from each image feature, permitting robust estimation of spectral properties, and reducing measurement noise in proportion to the area of the superpixel. This permits improved endmember extraction, and enables automated search for novel and constituent minerals in very noisy, hyperspatial images. This innovation begins with a graph-based segmentation based on the work of Felzenszwalb et al., but then expands their approach to the hyperspectral image domain with a Euclidean distance metric. Then, the mean spectrum of each segment is computed, and the resulting data cloud is used as input into sequential maximum angle convex cone (SMACC) endmember extraction.

Thompson, David R.↗

Combined hyperspatial and hyperspectral imaging spectrometer concept

There is a user need for increasing spatial and spectral resolution in Earth Observation (EO) optical instrumentation. Higher spectral resolution will be achieved by the introduction of spaceborne imaging spectrometers. Higher spatial resolutions of 1 - 3m will be achieved also, but at the expense of sensor redesign, higher communications bandwidth, high data processing volumes, and therefore, at the risk of time delays due to large volume data-handling bottlenecks. This paper discusses a design concept whereby the hyperspectral properties of a spaceborne imaging spectrometer can be used to increase the image spatial resolution, without such adverse cost impact.

Burke, Ian↗

The New CCSDS Standard for Low-Complexity Lossless and Near-Lossless Multispectral and Hyperspectral Image Compression

This paper describes the emerging Issue 2 of the CCSDS-123.0-B standard for low-complexity compression of multispectral and hyperspectral imagery, focusing on its new features and capabilities. Most significantly, this new issue incorporates a closed-loop quantization scheme to provide near-lossless compression capability while still supporting lossless compression, and introduces a new entropy coding option that provides better compression of low-entropy data.

Kiely, Aaron B.↗

Initial Results from the MRO Crism Hyperspectral Imaging Spectrometer for the Columbia Hills in Gusev Crater on Mars

Initial results from the Mars Reconnaissance Orbiter (MRO) Compact Reconnaissance Imaging Spectrometer for Mars (CRISM) instrument are reported for the Columbia Hills region in Gusev Crater, Mars. The imaged region (data product FRT00003192_07) includes the surface traversed by the Mars Exploration Rover (MER) Spirit. CRISM hyperspectral data (approx. 0.4 to 2.6 micrometers) are compared with multispectral data (approx. 0.4 to 1.0 micrometers) obtained by Spirit's Panoramic Camera (Pancam) instrument.

Morris, R. V.↗

Design of a Multi-Color Plenoptic Camera for Snapshot Hyperspectral Imaging

The design of a custom camera lens including: a two-lens optical system, filter array, and iris has been developed enabling a greyscale plenoptic camera to acquire full field-of-view, 2D, instantaneous hyperspectral measurements. This work focuses on the use of 7 discrete color filters and their effect on the image quality. It was determined that the placement of the filters inside the aperture plane of the camera was paramount to mitigating image artifacts. In addition, design rules were developed such that the optimal optical parameters (image distance, working distance, and focal length) can be easily determined from a few charts.

Fahringer, Timothy W., Jr.↗

Hyperspectral Image Turbulence Measurements of the Atmosphere

A Forward Looking Interferometer (FLI) sensor has the potential to be used as a means of detecting aviation hazards in flight. One of these hazards is mountain wave turbulence. The results from a data acquisition activity at the University of Colorado s Mountain Research Station will be presented here. Hyperspectral datacubes from a Telops Hyper-Cam are being studied to determine if evidence of a turbulent event can be identified in the data. These data are then being compared with D&P TurboFT data, which are collected at a much higher time resolution and broader spectrum.

Lane, Sarah E.↗