Thermodynamic limits of the depolymerization of poly(olefin)s using mechanochemistry
Feasibility of mechanochemical depolymerization of commodity poly(olefin)s in a ball mill reactor is assessed using thermodynamic data.
Chang, Yuchen↗
SEARCH · Engineering Papers
Results for “data change”
Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.
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polishCLR: A Nextflow Workflow for Polishing PacBio CLR Genome Assemblies
Long-read sequencing has revolutionized genome assembly, yielding highly contiguous, chromosome-level contigs. However, assemblies from some third generation long read technologies, such as Pacific Biosciences (PacBio) continuous long reads (CLR), have a high error rate. Such errors can be corrected with short reads through a process called polishing. Although best practices for polishing non-model de novo genome assemblies were recently described by the Vertebrate Genome Project (VGP) Assembly community, there is a need for a publicly available, reproducible workflow that can be easily implemented and run on a conventional high performance computing environment. Here, we describe polishCLR (https://github.com/isugifNF/polishCLR), a reproducible Nextflow workflow that implements best practices for polishing assemblies made from CLR data. PolishCLR can be initiated from several input options that extend best practices to suboptimal cases. It also provides re-entry points throughout several key processes, including identifying duplicate haplotypes in purge_dups, allowing a break for scaffolding if data are available, and throughout multiple rounds of polishing and evaluation with Arrow and FreeBayes. PolishCLR is containerized and publicly available for the greater assembly community as a tool to complete assemblies from existing, error-prone long-read data.
59 BASIC BIOLOGICAL SCIENCES↗
Make the Most Out of Genome Announcements with KBase
Genomics is a dynamic field driven by new technology, massive growth in data, and changes in how scientists share knowledge. This brings new challenges for researchers looking to maximize the impact of their science and ensure the longevity of their data. These changes are especially relevant for the practice of publishing genome announcements. Genome announcements are meant to share and promote newly sequenced organisms with the larger scientific community. A few decades ago, genome announcements were highly anticipated hallmarks of novel science. But, what was once a publishing coup is now an every day event. It is harder and harder to keep abreast of all the genomes that have been sequenced and promote your own new genomes to get the attention and recognition of your research community. Fortunately, KBase can help construct genomes from your sequencing data, generate reports for your announcement, and promote your data to your research community.
59 BASIC BIOLOGICAL SCIENCES↗
Bayesian analysis for estimating statistical parameter distributions of elasto-viscoplastic material models
High temperature design methods rely on constitutive models for inelastic deformation and failure typically calibrated against the mean of experimental data without considering the associated scatter. Variability may arise from the experimental data acquisition process, from heat-to-heat material property variations, or both and need to be accurately captured to predict parameter bounds leading to efficient component design. Applying the Bayesian Markov Chain Monte Carlo (MCMC) method to produce statistical models capturing the underlying uncertainty in the experimental data is an area of ongoing research interest. This work varies aspects of the Bayesian MCMC method and explores their effect on the posterior parameter distributions for a uniaxial elasto-viscoplastic damage model using synthetically generated reference data. From our analysis with the uniaxial inelastic model we determine that an informed prior distribution including different types of test conditions results in more accurate posterior parameter distributions. The parameter posterior distributions, however, do not improve when increasing the number of similar experimental data. Additionally, changing the amount of scatter in the data affects the quality of the posterior distributions, especially for the less sensitive model parameters. Moreover, we perform a sensitivity study of the model parameters against the likelihood function prior to the Bayesian analysis. The results of the sensitivity analysis help to determine the reliability of the posterior distributions and reduce the dimensionality of the problem by fixing the insensitive parameters. The comprehensive study described in this work demonstrates how to efficiently apply the Bayesian MCMC methodology to capture parameter uncertainties in high temperature inelastic material models. Quantifying these uncertainties in inelastic models will improve high temperature engineering design practices and lead to safer, more effective component designs.
42 ENGINEERING↗
Data Report on Post-Irradiation Dimensional Change of AGC-1 Samples
This report documents the measured post irradiation dimensional change in the AGC-1 samples. The AGC-1 capsule is the first in six planned irradiation capsules comprising the Advanced Graphite Creep (AGC) test series. AGC-1 irradiation began September 5, 2009 in the Advanced Test Reactor (ATR) and was completed on January 8, 2011. The capsule was cooled for 3 months in the ATR Canal, and then shipped to MFC in April 2011 for disassembly and sample extraction. After extraction the samples were shipped to the INL Research Center (IRC) for initial post-irradiation examination (PIE) and storage in the irradiated graphite vault. The AGC-1 capsule design contained “matched pair” samples to ascertain the irradiation-induced dimensional changes and levels of creep experienced in different graphite types. The irradiation-induced dimensional changes and creep levels are determined by comparing the total dimensional change for stressed and unstressed samples of the same type of graphite exposed to the same dose levels and at similar temperatures. Under irradiation creep (i.e. permanent strain due to irradiation, stress, and temperature) the stressed samples should demonstrate more dimensional change than the unstressed samples. This additional dimensional change in the stressed samples is designated as “irradiation-induced creep” in graphite. The data are further presented using the parameters influencing dimensional change in graphite; levels of induced stress, temperature, graphite type, and dose. However, the AGC-1 post-irradiation examination is a significant endeavor and this data report serves to provide irradiation-induced dimensional change data for AGC capsule design refinement as well as a status on the progress of the PIE activities. The dimensional changes of both the samples and graphite body are very important to the design of the future AGC capsules (AGC-3 through AGC-6) and are provided as soon as the data are available in order to determine whether design changes to the next capsule are required. A complete evaluation of the irradiation-induced dimensional change data will be performed for a final AGC-1 PIE report that will include full analysis of pre- and post-irradiation data, with verified AGC-1 irradiation conditions of temperature and dose.
11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗
Deep-learning-based domain adaptation for cavity fault prediction at Jefferson Laboratory
Superconducting radio-frequency (SRF) cavities are the core components of the Continuous Electron Beam Accelerator Facility (CEBAF) at Jefferson Lab, providing high-power electron beams for nuclear physics experiments. The facility comprises 418 SRF cavities, and any fault in these cavities can lead to interruptions in the electron beam supply. Cavity faults are the leading cause of beam trips in CEBAF. Predicting and mitigating those faults before onset can help maintain normal operation. Existing models face challenges in distinguishing between normal and fault signals when changes occur in the underlying time-series data, from changes in control software, operational parameters, or the environment. This work proposes a deep learning domain adaptation model that leverages transfer learning to address fault prediction challenges by improving accuracy. The model is trained and fine-tuned using a dataset collected for faulty and normal operation using a data acquisition system in CEBAF. Our deep learning-based domain adaptation model achieves a prediction accuracy of 89.61% of the fault and normal signals. The developed model effectively predicts normal running signals compared to the baseline approach without domain adaptation. This capacity is essential for the fault prediction task in the CEBAF because of heavily imbalanced data containing vast amounts of normal signals. The model performs well for predicting faults several hundred milliseconds before the fault onset compared to other models where no adaptation is applied. Incorporating deep learning-based domain adaptation techniques will significantly improve the fault prediction performance.
Rahman, Md Monibor [Old Dominion Univ., Norfolk, V↗
Warming of the lower Columbia River , 1853 to 2018
Abstract Water temperature is a critical ecological indicator; however, few studies have statistically modeled century‐scale trends in riverine or estuarine water temperature, or their cause. Here, we recover, digitize, and analyze archival temperature measurements from the 1850s onward to investigate how and why water temperatures in the lower Columbia River are changing. To infill data gaps and explore changes, we develop regression models of daily historical Columbia River water temperature using time‐lagged river flow and air temperature as the independent variables. Models were developed for three time periods (mid‐19th, mid‐20th, and early 21st century), using archival and modern measurements (1854–1876; 1938–present). Daily and monthly averaged root‐mean‐square errors overall are 0.89°C and 0.77°C, respectively for the 1938–2018 period. Results suggest that annual averaged water temperature increased by 2.2°C ± 0.2°C since the 1850s, a rate of 1.3°C ± 0.1°C/century. Increased water temperatures are seasonally dependent. An increase of approximately 2.0°C ± 0.2°C/century occurs in the July–Dec time‐frame, while springtime trends are statistically insignificant. Rising temperatures change the probability of exceeding ecologically important thresholds; since the 1850s, the number of days with water temperatures over 20°C increased from ~5 to 60 per year, while the number below 2°C decreased from ~10 to 0 days/per year. Overall, the modern system is warmer, but exhibits less temperature variability. The reservoir system reduces sensitivity to short‐term atmospheric forcing. Statistical experiments within our modeling framework suggest that increased water temperature is driven by warming air temperatures (~29%), altered river flow (~14%), and water resources management (~57%).
54 ENVIRONMENTAL SCIENCES↗
Predicting Stress in Cemented Doublets Undergoing Temperature Change: Theory, Practice, and Data
Cemented doublet, adhesive, optical engineering
42 ENGINEERING↗
Data from: Soil carbon change in intensive agriculture after 25 years of conservation management
Changes in soil organic carbon (SOC) and nitrogen (SON) are strongly affected by land management, but few long-term comparative studies have surveyed changes throughout the whole soil profile. We quantified 25-year SOC and SON changes to 1 m in 10 replicate ecosystems at an Upper Midwest, USA site. We compared four annual cropping systems in maize ( Zea mays )-soybean ( Glycine max)-winter wheat ( Triticum aestivum ) rotations, each managed differently (Conventional, No-till, Reduced input, and Biologically based); in three managed perennial systems (hybrid Poplar ( Populus × euramericana ), Alfalfa ( Medicago sativa ), and Conifer ( Pinus spp.); and in three successional systems (Early, Mid- and Late succession undergoing a gradual change in species composition and structure over time).
agricultural sciences↗
Impact of Changes in ENDF/B-VII.1 and ENDF/B-VIII.0 235U Nuclear Data Indicated by NDSE Studies on LLNL Pulsed Sphere Simulations
A recent journal article by J.A. Gomez et al. measured gamma-ray die-off curves of three subcritical static highly-enriched uranium (HEU) assemblies driven by an external neutron source with a new detector system. This new detector system was developed for being used in dynamically driven subcritical assemblies as part of the Neutron Diagnosed Subcritical Experiments (NDSE) program. Simulations of these die-off curves with various nuclear data and comparison to experimental data indicated that a decrease of the ENDF/B-VII.1 235 U(n,inl) cross section by a factor 0.8 and 0.85 for ENDF/B-VIII.0 would lead to better predictions of experimental data. Here, we test the proposed changes with another type of measurement response, namely neutron-leakage spectra emitted in LLNL pulsed sphere measurements. These spheres were pulsed by 14-MeV neutrons produced via the D+T reaction in their center. The proposed changes in nuclear data have a distinctly smaller impact on predicting pulsed-sphere neutron-leakage spectra than for the die-off curves; they lead to a worsened prediction of the inelastic valley of LLNL pulsed-sphere neutron spectra indicating that the proposed change could constitute a compensating error. Changes in the inelastic angular distributions along with the cross section might be worthwhile to study
73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
Global Carbon Budget 2022
Abstract. Accurate assessment of anthropogenic carbon dioxide (CO2) emissions and their redistribution among the atmosphere, ocean, and terrestrial biosphere in a changing climate is critical to better understand the global carbon cycle, support the development of climate policies, and project future climate change. Here we describe and synthesize data sets and methodologies to quantify the five major components of the global carbon budget and their uncertainties. Fossil CO2 emissions (EFOS) are based on energy statistics and cement production data, while emissions from land-use change (ELUC), mainly deforestation, are based on land use and land-use change data and bookkeeping models. Atmospheric CO2 concentration is measured directly, and its growth rate (GATM) is computed from the annual changes in concentration. The ocean CO2 sink (SOCEAN) is estimated with global ocean biogeochemistry models and observation-based data products. The terrestrial CO2 sink (SLAND) is estimated with dynamic global vegetation models. The resulting carbon budget imbalance (BIM), the difference between the estimated total emissions and the estimated changes in the atmosphere, ocean, and terrestrial biosphere, is a measure of imperfect data and understanding of the contemporary carbon cycle. All uncertainties are reported as ±1σ. For the year 2021, EFOS increased by 5.1 % relative to 2020, with fossil emissions at 10.1 ± 0.5 GtC yr−1 (9.9 ± 0.5 GtC yr−1 when the cement carbonation sink is included), and ELUC was 1.1 ± 0.7 GtC yr−1, for a total anthropogenic CO2 emission (including the cement carbonation sink) of 10.9 ± 0.8 GtC yr−1 (40.0 ± 2.9 GtCO2). Also, for 2021, GATM was 5.2 ± 0.2 GtC yr−1 (2.5 ± 0.1 ppm yr−1), SOCEAN was 2.9 ± 0.4 GtC yr−1, and SLAND was 3.5 ± 0.9 GtC yr−1, with a BIM of −0.6 GtC yr−1 (i.e. the total estimated sources were too low or sinks were too high). The global atmospheric CO2 concentration averaged over 2021 reached 414.71 ± 0.1 ppm. Preliminary data for 2022 suggest an increase in EFOS relative to 2021 of +1.0 % (0.1 % to 1.9 %) globally and atmospheric CO2 concentration reaching 417.2 ppm, more than 50 % above pre-industrial levels (around 278 ppm). Overall, the mean and trend in the components of the global carbon budget are consistently estimated over the period 1959–2021, but discrepancies of up to 1 GtC yr−1 persist for the representation of annual to semi-decadal variability in CO2 fluxes. Comparison of estimates from multiple approaches and observations shows (1) a persistent large uncertainty in the estimate of land-use change emissions, (2) a low agreement between the different methods on the magnitude of the land CO2 flux in the northern extratropics, and (3) a discrepancy between the different methods on the strength of the ocean sink over the last decade. This living data update documents changes in the methods and data sets used in this new global carbon budget and the progress in understanding of the global carbon cycle compared with previous publications of this data set. The data presented in this work are available at https://doi.org/10.18160/GCP-2022 (Friedlingstein et al., 2022b).
54 ENVIRONMENTAL SCIENCES↗
Deep learning models map rapid plant species changes from citizen science and remote sensing data
Anthropogenic habitat destruction and climate change are reshaping the geographic distribution of plants worldwide. However, we are still unable to map species shifts at high spatial, temporal, and taxonomic resolution. Here, we develop a deep learning model trained using remote sensing images from California paired with half a million citizen science observations that can map the distribution of over 2,000 plant species. Our model— Deepbiosphere— not only outperforms many common species distribution modeling approaches (AUC 0.95 vs. 0.88) but can map species at up to a few meters resolution and finely delineate plant communities with high accuracy, including the pristine and clear-cut forests of Redwood National Park. These fine-scale predictions can further be used to map the intensity of habitat fragmentation and sharp ecosystem transitions across human-altered landscapes. In addition, from frequent collections of remote sensing data, Deepbiosphere can detect the rapid effects of severe wildfire on plant community composition across a 2-y time period. These findings demonstrate that integrating public earth observations and citizen science with deep learning can pave the way toward automated systems for monitoring biodiversity change in real-time worldwide.
Gillespie, Lauren E.↗
Verification and Validation of the Stakeholder Tool for Assessing Radioactive Transportation (START) – 22323
The U.S. Department of Energy (DOE) Office of Integrated Waste Management is planning for the eventual transportation, storage, and disposal of spent nuclear fuel (SNF) and high-level radioactive waste (HLW) from nuclear power plant and DOE sites. The Stakeholder Tool for Assessing Radioactive Transportation (START) is a web-based, geospatial decision-support tool developed for evaluating routing options and other aspects of transporting SNF and HLW, covering rail, truck, barge, and intermodal infrastructure and operations in the continental United States. The verification and validation (V&V) process is intended to independently assess START to provide confidence in the ability of START to accurately provide intended results. The V&V process checks the START tool using a variety of methods, ranging from independent hand calculations to comparison of START performance and results to those of other codes. The V&V activity was conducted independently from the START development team with opportunities to provide feedback and collaborate throughout the process. The V&V analyzed attributes of transportation routes produced by START, including route distance and both population and population density captured within buffer zones around routes. Population in the buffer zone, population density in the buffer zone, and route distance were all identified as crucial outputs of the START code and were subject to V&V tasks. Some of the improvements identified through the V&V process were standardizing the underlying population data in START, changing the projection of the population raster data, and changes to the methodology used for population density to improve its applicability for expected users. This collaboration also led to suggested improvements to some of the underlying shape file segments within START. A formal series of test routes went through the V&V process from START version 3.2.1 following the implementation of the recommended improvements to START. The V&V of the buffer zone population and distance reported in START were achieved by utilizing a custom workflow developed in QGIS. This platform was chosen because it is fully independent of START. The buffer zone population and route distances in START showed excellent agreement to independent V&V test results. Over 200 route test cases were run; in all cases, the percent difference in the population within the buffer zone was less than +/- 5%, and the majority of cases were below +/- 1%. These cases were also duplicated in ArcMap, which is Environmental Systems Research Institute’s (ESRI) GIS desktop application. The ArcMap results also show good agreement; however, they cannot be considered independent of START because START also uses ESRI software. The V&V tasks are currently addressing population density and estimated radiation dose in START as well as implementing further automation of the V&V process to allow larger suites of test routes to be run more easily and quickly by less experienced GIS users. These improvements to the V&V process will make it a valuable tool for the development team and the stakeholders so that each new iteration of START can easily be checked for quality and consistency. This paper and presentation will describe the V&V process, findings and implications, and ongoing V&V activities.
START, DOE, Transporation, dose, GIS↗
PV_ICE: PV in the Circular Economy, Dynamic Energy and Materials Tool (PV ICE)
This open-source tool implements Circular Economy metrics for photovoltaic (PV) materials. It can be used to quantify and assign a value framework to efforts on re-design, reduction, replacement, reuse, recycling, and lifetime and reliability increases in the PV value chain. The PV_ICE is leveraging published data from different sources on PV manufacturing and predicted technological changes. Input data is being compiled here This tool will help implement circularity metrics, quantify and assign a value framework to efforts on re-design, reduction, replacement, reusage, recycling, and lifetime and reliability increases on PV.
Ovaitt, nee Ayala Pelaez, Silvana↗
Quantum oscillations and transport properties of layered single-crystal SrCu 4 As 2
Here, we report a systematic investigation of the physical properties and Fermi-surface topology of layered single-crystal SrCu 4 As 2 using electrical transport, magnetotransport, and quantum-oscillation experiments plus band-structure calculations. The temperature-dependent electrical resistivity reveals a hysteretic phase transition at 𝑇 𝑃 =59 K, most likely associated with a structural change. Hall resistivity data suggest a marked change in the average hole density resulting from the latter phase transition near 𝑇 𝑃 . A large, linear, and nonsaturating magnetoresistance is observed at low temperatures in SrCu 4 As 2 , likely attributable to the multipocket Fermi surface. Quantum-oscillation data measured in magnetic fields of up to 60 T show several oscillation frequencies exhibiting low effective masses, indicating the presence of Dirac-like band dispersion in SrCu 4 As 2 , as suggested by the band structure calculations.
36 MATERIALS SCIENCE↗
Nuclear Data Management and Analysis System Plan
The United States Department of Energy Advanced Reactor Technologies Program was formed in Fiscal Year 2015 and encompasses the Next Generation Nuclear Plant Project and Very High Temperature Reactor (VHTR) Program as they were known previously. The VHTR Program was created to support design and licensing of the first VHTR nuclear plant. Data created for and used by the program must be qualified for use, stored in a readily accessible electronic form, categorized to assure the correct data are used, and controlled to prevent data corruption or inadvertent changes. The Nuclear Data Management and Analysis System was designed to support the data needs of the VHTR Program, at the time and now the Advanced Reactor Technologies Program. Since its inception, use of the Nuclear Data Management and Analysis System has expanded to support additional projects and programs with similar requirements for control, analysis, and availability of large data sets.
99 GENERAL AND MISCELLANEOUS↗
Soil Temperature and Moisture, Teller Road Mile Marker 27, Seward Peninsula, Alaska, 2016-2023
Daily averages of soil temperature and moisture measured once every hour at different heights located at Intensive Monitoring Stations at Teller Road Mile Marker 27 site. Data are retrieved annually from 2016-2023. This is the final update to this dataset: no changes to previous data files with the addition of 2022-2023 data files. Data files have header rows, NaN fields indicate invalid or missing data, and negative vertical offsets are above ground. UPDATED 2025-07: Seven new data files collected in 2022-2023 were added and no previously archived data were changed. This represents the final collection of data and text in the title was changed to reflect the defined timespan. Other files that were added: file-level metadata, a data dictionary, a site location map, and a data file inventory by year. The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a research effort to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research. The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska. Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).
54 ENVIRONMENTAL SCIENCES↗