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All sourcesNASA NTRSDOE OSTI
NASA NTRS2016

Advancing Small Satellite Electronics Heritage for Microfluidic Biological Experiments

DLR's Eu:CROPIS (Euglena and Combined Regenerative Organic-Food Production in Space) mission, launching in 2017, will carry multiple biological payloads into a sun-synchronous orbit, including NASA Ames' PowerCell experiment. PowerCell will attempt to characterize the viability of synthetic biology at micro-g, Lunar, and Martian gravity levels. PowerCell experiment requirements demand an electronic system similar to previous microfluidic biology payloads, but with an expanded feature set. As such, the system was based on PharmaSat (Diaz-Aguado et al. 2009), a previous successful biology payload from NASA Ames, and improved upon. Newer, more miniaturized electronics allow for greater capability with a lower part count and smaller size. Two identical PowerCell enclosures will fly. Each enclosure contains two separate and identical experiments with a 48-segment optical density measurement system, grow light system, microfluidic system for nutrient delivery and waste flushing, plus thermal control and environmental sensing/housekeeping including temperature, pressure, humidity, and acceleration. Electronics consist of a single Master PCB that interfaces to the spacecraft bus and regulates power and communication, plus LED, Detector, and Valve Manifold PCBs for each experiment. To facilitate ease of reuse on future missions, experiment electronics were designed to be compatible with a standard 3U small sat form factor and power bus, or to interface with a Master power/comm PCB for use in a larger satellite as in the case of PowerCell's flight on Eu:CROPIS.

biology↗
NASA NTRS1987

Measurement of human pilot dynamic characteristics in flight simulation

Fast Fourier Transform (FFT) and Least Square Error (LSE) estimation techniques were applied to the problem of identifying pilot-vehicle dynamic characteristics in flight simulation. A brief investigation of the effects of noise, input bandwidth and system delay upon the FFT and LSE techniques was undertaken using synthetic data. Data from a piloted simulation conducted at NASA Ames Research Center was then analyzed. The simulation was performed in the NASA Ames Research Center Variable Stability CH-47B helicopter operating in fixed-basis simulator mode. The piloting task consisted of maintaining the simulated vehicle over a moving hover pad whose motion was described by a random-appearing sum of sinusoids. The two test subjects used a head-down, color cathode ray tube (CRT) display for guidance and control information. Test configurations differed in the number of axes being controlled by the pilot (longitudinal only versus longitudinal and lateral), and in the presence or absence of an important display indicator called an 'acceleration ball'. A number of different pilot-vehicle transfer functions were measured, and where appropriate, qualitatively compared with theoretical pilot- vehicle models. Some indirect evidence suggesting pursuit behavior on the part of the test subjects is discussed.

Reedy, James T.↗
NASA NTRS2023

Gravity Degree-Depth Relationship Using Point Mass Spherical Harmonics

Relationships between the degree of a spherical harmonic model of the gravitational field of a body and the depth of a source expressed as a density contrast can be used to study the structure of features. Here, we show that the gravitational acceleration per spherical harmonic degree of a constant density source has an extremum that depends on the depth of the source. Using the spherical harmonics expansion for a point mass source, we use this to derive a degree-depth relationship. Our relationship resembles an earlier one derived by Bowin (1983), with substantial differences at the lower degrees. We also find that a recent relationship derived by Deng et al. (2022) over-estimates the source depth. The relationship that we derive relates spherical harmonic degree n to depth d for a planet of radius R according to d = (1 - e -1/n+1 )R, which simplifies to d = R/(n + 1) for high degrees. We support our new relationship with synthetic models of a density contrast in a planet. We also show how the differences between our relationship and that of Bowin (1983) affect band-filtered gravity, for example when inspecting the upper 100 km of the Moon. Using point masses in our modeling results in an approximate relationship where in reality sources can be deeper than estimated, since any source contributes to all spherical harmonic degrees. The use of the contribution per individual degree however provides an intuitive relationship between spherical harmonic degree and depth that can be used to place relative bounds on source depths or to determine the bounds on spherical harmonic expansions when band-filtering gravity field models.

Geopotential theory↗
NASA NTRS1996

Template-Directed Ligation of Peptides to Oligonucleotides

Synthetic oligonucleotides and peptides have enjoyed a wide range of applications in both biology and chemistry. As a consequence, oligonucleotide-peptide conjugates have received considerable attention, most notably in the development of antisense constructs with improved pharmacological properties. In addition, oligonucleotide-peptide conjugates have been used as molecular tags, in the assembly of supramolecular arrays and in the construction of encoded combinatorial libraries. To make these chimeric molecules more accessible for a broad range of investigations, we sought to develop a facile method for joining fully deprotected oligonucleotides and peptides through a stable amide bond linkage. Furthermore, we wished to make this ligation reaction addressable, enabling one to direct the ligation of specific oligonucleotide and peptide components.To confer specificity and accelerate the rate of the reaction, the ligation process was designed to be dependent on the presence of a complementary oligonucleotide template.

Bruick, Richard K.↗
NASA NTRS1996

Active Sonic Boom Control

A theory and simulation code are developed to study nonsteady sources as means to control sonic booms of supersonic aircraft. A key result is that the source of sonic boom pressure is not confined to the length of the aircraft but occupies an extensive segment of flight path. An aircraft in nonsteady flight functions as a synthetic aperture antenna, generating complex acoustic waves with no simple relation to instantaneous volume or lift distributions. The theory applies linear acoustics to slender nonsteady sources but requires no far field approximation. The solution for pressure contains a term not seen in Whitham's theory for sonic booms of distant supersonic aircraft. The term describes a pressure field that decays algebraically behind the Mach cone and, in the case of steady flight, integrates to a ground load equal to the weight of the aircraft. The algebraic term is separate from those that describe the sonic boom. Two nonsteady source phenomena are evaluated: periodic velocity changes (surge), and periodic longitudinal lift redistribution (slosh). Surge can attenuate a sonic boom and convert it into prolonged weak reverberation, but accelerations needed to produce the phenomenon seem too large for practical use. Slosh may be practical and can alter sonic booms but does not, on the average, result in boom attenuation. The conclusion is that active sonic boom abatement is possible in theory but maybe not practical

Crow, Steven C.↗
NASA NTRS2017

Leveraging the Usage of GPUs in SAR Processing for the NISAR Mission

The NASA ISRO Synthetic Aperture Radar (NISAR) mission will redefine the future of earth science in terms of both the quality as well as the quantity of data that will be downlinked daily. The current software architecture used to process this data is the InSAR Scientific Computing Environment (ISCE), a powerful and modular platform that applies a combination of novel and legacy processing modules to many sources of SAR data. Until recently, this architecture could process most images in a reasonable amount of time; however in the case of the NISAR mission (where the daily influx as well as the size of the images themselves are significantly larger) the current architecture can take hours to process even a single image. This paper explores new efforts to use a Graphics Processing Unit (GPU) to accelerate one of the processing modules to achieve unprecedented runtimes with no loss in precision, potentially setting a new standard in radar processing in the world of “Big Data”.

Cohen, Joshua↗
NASA NTRS2000

HST Studies of the Chromospheres, Wind, and Mass-Loss Rates of Cool Giant and Supergiant Stars

UV spectra of K-M giant and supergiant stars and of carbon stars have been acquired with the Goddard High Resolution Spectrograph (GHRS) on the Hubble Space Telescope (HST). These spectra have been used to measure chromospheric flow and turbulent velocities, study the acceleration of their stellar winds, acquire constraints on their outer atmospheric structure, and enable estimates of their mass-loss rates. Results from our observations of the giant stars Gamma Dra (K5 III hybrid), Alpha Tau (K5 III), Gamma Cru (M3.4 III), Mu Gem (M3 IIIab), and 30 Her (MG III), the supergiants Alpha Ori (M2 Iab) and Lambda Vel (K5 Ib), and the carbon stars TX Psc (NO; C6,2) and TW Hor (NO; C7,2) will be summarized and compared. The high resolution and wavelength accuracy of these data have allowed the direct measurement of the acceleration of the stellar winds in the chromospheres of several of these stars (from initial velocities of 3-9 km/s to upper velocities of 15-25 km/s) and of the chromospheric macroturbulence (-25-35 km/s). The high signal-to-noise and large dynamic range of these spectra have allowed the detection and identification of numerous new emission features, including weak C IV emission indicative of hot transition-region plasma in the non-coronal giant Alpha Tau, many new fluorescent lines of Fe II, and the first detection of fluorescent molecular hydrogen emission and of Ca II recombination lines in the UV spectrum of a giant star. The UV spectrum of two carbon stars have been studied with unprecedented resolution and reveal extraordinarily complicated Mg II lines nearly smothered by circumstellar absorptions. Finally, comparison of synthetic UV emission line profiles computed with the Lamers et al. (1987) Sobolev with Exact Integration (SEI) code with observations of chromospheric emission lines overlain with wind absorption features provides estimates of the mass-loss rates for four of these stars.

Carpenter, Kenneth G.↗
NASA NTRS2021

Adaptive Data Screening for Multi-Angle Polarimetric Aerosol and Ocean Color Remote Sensing Accelerated by Automatic Differentiation

Remote sensing measurements from multi-angle polarimeters (MAPs) contain rich aerosol microphysical property information, and these sensors have been used to perform retrievals in optically complex atmosphere and ocean systems. Previous studies have concluded that, generally, five moderately separated viewing angles in each spectral band provide sufficient accuracy for aerosol property retrievals, with performance gradually saturating as angles are added above that threshold. The Hyper-Angular Rainbow Polarimeter (HARP) instruments provide high angular sampling with a total of 90-120 unique angles across four bands, a capability developed mainly for liquid cloud retrievals. In practice, not all view angles are optimal for aerosol retrievals due to impacts of clouds, sun glint, and other impediments. The many viewing angles of HARP can provide resilience to these effects, if the impacted views are screened from the dataset, as the remaining views may be sufficient for successful analysis. In this study, we discuss how the number of available viewing angles impacts aerosol and ocean color retrieval uncertainties, as applied to two versions of the HARP instrument. AirHARP is an airborne prototype that was deployed in the ACEPOL field campaign, while HARP2 is an instrument in development for the upcoming NASA Plankton, Aerosol, Cloud, ocean Ecosystem (PACE) mission. Based on synthetic data, we find that a total of 20-30 angles across all bands (i.e. five to eight viewing angles per band) are sufficient to achieve good retrieval performance. Following from this result, we develop an adaptive multi-angle polarimetric data screening (MAPDS) approach to evaluate data quality by comparing measurements with their best-fitted forward model. The FastMAPOL retrieval algorithm is used to retrieve scene geophysical values, by matching an efficient, deep learning-based, radiative transfer emulator to observations. The data screening method effectively identifies and removes viewing angles affected by thin cirrus clouds and other anomalies, improving retrieval performance. This was tested with AirHARP data, and we found agreement with the High Spectral Resolution Lidar-2 (HSRL-2) aerosol data. The data screening approach can be applied to modern satellite remote sensing missions, such as PACE, where a large amount of multi-angle, hyperspectral, polarimetric measurements will be collected.

multi-angle polarimeter↗
NASA NTRS2005

Recent Advances in Radar Polarimetry and Polarimetric SAR Interferometry

The development of Radar Polarimetry and Radar Interferometry is advancing rapidly, and these novel radar technologies are revamping Synthetic Aperture Radar Imaging decisively. In this exposition the successive advancements are sketched; beginning with the fundamental formulations and high-lighting the salient points of these diverse remote sensing techniques. Whereas with radar polarimetry the textural fine-structure, target-orientation and shape, symmetries and material constituents can be recovered with considerable improvements above that of standard amplitude-only Polarization Radar ; with radar interferometry the spatial (in depth) structure can be explored. In Polarimetric-Interferometric Synthetic Aperture Radar (POL-IN-SAR) Imaging it is possible to recover such co-registered textural plus spatial properties simultaneously. This includes the extraction of Digital Elevation Maps (DEM) from either fully Polarimetric (scattering matrix) or Interferometric (dual antenna) SAR image data takes with the additional benefit of obtaining co-registered three-dimensional POL-IN-DEM information. Extra-Wide-Band POL-IN-SAR Imaging - when applied to Repeat-Pass Image Overlay Interferometry - provides differential background validation and measurement, stress assessment, and environmental stress-change monitoring capabilities with hitherto unattained accuracy, which are essential tools for improved global biomass estimation. More recently, by applying multiple parallel repeat-pass EWB-POL-D(RP)-IN-SAR imaging along stacked (altitudinal) or displaced (horizontal) flight-lines will result in Tomographic (Multi- Interferometric) Polarimetric SAR Stereo-Imaging , including foliage and ground penetrating capabilities. It is shown that the accelerated advancement of these modern EWB-POL-D(RP)-IN-SAR imaging techniques is of direct relevance and of paramount priority to wide-area dynamic homeland security surveillance and local-to-global environmental ground-truth measurement and validation, stress assessment, and stress-change monitoring of the terrestrial and planetary covers. In addition, various closely related topics of (i) acquiring additional and protecting existing spectral windows of the Natural Electromagnetic Spectrum (NES) pertinent to Remote Sensing; (ii) mitigating against common "Radio Frequency Interference (RFI)" and intentional Directive Jamming of Airborne & Space borne POL-IN-SAR Imaging Platforms are appraised.

Boerner, Wolfgang-Martin↗
NASA NTRS1999

Dynamic Deformation of ETNA Volcano Observed by GPS and SAR Interferometry

Synthetic aperture radar (SAR) interferometry and GPS have shown that during the quiescent period from 1993-1995 Mt. Etna volcano, Italy, inflated. Since the initiation of eruptive activity since late 1995 the deformation has been more contentious. We will explore the detailed deformation during the period from 1995-1996 spanning the late stages of inflation and the beginning of eruptive activity. We use SAR interferometry and GPS data to measure the volcano deformation. We invert the observed deformation for both simple point source. le crack elastic sources or if warranted for a spheroidal pressure So In particular, we will examine the evolution of the inflation and the transition to a lesser deflation observed at the end of 1995. We use ERS-1/2 SAR data from both ascending and descending passes to allow for dense temporal 'sampling of the deformation and to allow us to critically assess atmospheric noise. Preliminary results from interferometry suggest that the inflation rate accelerated prior to resumption of activity in 1995, while GPS data suggest a more steady inflation with some fluctuation following the start of activity. This study will compare and contrast the interferometric SAR and GPS results and will address the strengths and weaknesses of each technique towards volcano deformation studies.

Lundgren, P.↗
NASA NTRSDate not supplied

PowerCell aboard the EuCROPIS satellite - Results from the first synthetic biology experiment in space

Synthetic biology is the design and construction of new biological parts and systems not found in nature, a technology that we believe will be a game-changing technology for space exploration. The PowerCell concept is an ecology based on photosynthetic microbes taking advantage of in situ materials and energy to generate, on-demand, useful products (food, fuel, cloths, drugs, etc.) that satisfy specific needs of long-term human presence away from Earth. This first PowerCell experiment is testing this concept as well as several key mechanisms of engineering biology in a 48-well plate microfluidics system. NASA's PowerCell experiment was loaded in the fluidics system at NASA Ames in May 2016, and subsequently integrated on the DLR's compact satellite Eu:CROPIS (Euglena Combined Regenerative Organic food Production In Space), as a secondary payload. Launched into Earth’s orbit from the Vandenberg Air Force Base, California, USA, in December 3, 2019, the Eu:CROPIS platform has provided an artificial gravity through rotational acceleration, simulating gravity ranges compatible to those found on Mars and on the Moon, as well as microgravity in the absence of acceleration. Each set of biological experiments performed at Earth's orbit was compared to ground controls. Over 400 days' worth of mission data showed that all hardware and software worked as planned, and microbial growth was observed in all four gravity regimes, including growth on cyanobacterial cell extract in three out of four gravity regimes. The genetic transformation experiment was successful in microgravity and provided valuable long-term reagent stability data, including antibiotic efficacy. The demonstrated ability of hardy bacterial spores to recover from a long-term stasis period will be fundamental for deep human space missions. Lessons learned from hardware design to experimental operations are leading to improved designs and capabilities for future missions.

Ivan Glaucio Paulino Lima↗
NASA NTRS2020

Detecting Seasonal Ice Dynamics in Satellite Images

Fully understanding how glaciers respond to environmental change will require new methods to help us identify the onset of ice acceleration events and observe how dynamic signals propagate within glaciers. In particular, observations of ice dynamics on seasonal timescales may offer insights into how a glacier interacts with various forcing mechanisms throughout the year. The task of generating continuous ice velocity time series that resolve seasonal variability is made more difficult by a spotty satellite record that contains no optical observations throughout the dark, polar winters. Furthermore, velocities obtained by feature tracking are marked by high noise when image pairs are separated by short time intervals and contain no direct insights into variability that occurs between images separated by long time intervals. In this paper, we describe a method of analyzing optical or SAR-derived feature-tracked velocities to characterize the magnitude and timing of seasonal ice dynamic variability. Our method is agnostic to data gaps and is able to recover climatological average winter velocities regardless of the availability of direct observations during winter. Using characteristic image acquisition times and error distributions from Antarctic image pairs in the ITS_LIVE dataset, we generate synthetic ice velocity time series, then apply our method to recover imposed magnitudes of seasonal variability within ±1.4 m yr−1. We then validate the techniques by comparing our results to GPS data collected on Russell Glacier in Greenland. The methods presented here may be applied to better understand how ice dynamic signals propagate on seasonal timescales, and what mechanisms control the flow of the world’s ice.

Chad A. Greene↗
NASA NTRS1999

Ice Flow in the Northeast Greenland Ice Stream

As the use of satellite data for icesheet research has accelerated, new discoveries have changed the way that we think about ice discharge, and new tools have changed the way that we measure it. We have begun to apply a combination of remote sensing and ice sheet modeling techniques to study ice flow in the recently identified northeast Greenland ice stream. This ice stream shows evidence of organized flow far into the interior and has low-slope areas of rapid flow and regions of enhanced shear that resemble the ice streams of West Antarctica. The onset of rapid flow close to the ice divide and the evolution of its flow pattern, however, make this ice stream unique. Our investigation is aimed at increasing our understanding of this ice stream and its origins and role in the discharge of ice from the ice sheet and the effects that discharge may have on the history and evolution of the ice in northern Greenland. The ice flow data comes from satellite radar interferometry tied to reference points. We have applied this technique to measure the velocity over the entire ice stream, which is more than 700 km in length. The velocity contours reveal distinct, well-developed shear margins, which are coincident with linear features in the Synthetic Aperture Radar (SAR) amplitude imagery. It is surprising to see such defined, enhanced flow so far inland and so close to the ice divide. The velocity data and topography data are being used to feed a modeling effort that allows us to study the dynamics and character rapid flow. Additional information is contained in the original.

Joughin, Ian↗
NASA NTRS2020

Multibody Based Digital Astronaut Dynamics Simulation

BACKGROUND: This study provides the Software, Robotics, & Simulation Division at the NASA Johnson Space Center with a verification tool for multibody dynamics simulation requiring human motion. The motivation stems from current studies of several Vibration Isolation & Stabilization(VIS)system designs that attenuate the moments and forces which would be transmitted to a spacecraft during an exercise. A multibody dynamics model for a proposed VIS was available previously[1], therefore modeling of the VIS was not needed for this work. The interest here is in creating the multibody dynamics model of an astronaut in motion which may be utilized independently or while attached to a mechanism. An existing simulation [2] that utilizes OpenSim [3,4] and an in-house multibody dynamics package (MBDyn) [5] is used in order to verify the astronaut model. The main advantage this model will have over the existing simulation is that everything will be processed in one tool. METHODS AND RESULTS: Creating the simulation required; estimation of Body Segment Inertial Parameters (BSIP),a multibody model of the human-VIS system, joint acceleration profiles, and input files for MBDyn, which is used for this analysis. The scaling factors provided by Dumas et al. [6] are utilized in estimating the BSIP. Anthropometric data are used for estimating these parameters, the Anthropometric Survey of US Army Personnel (ANSUR II) [7] was the source. The astronaut model consists of 15 bodies, 14 joints and 32 degrees of freedom, with the dynamics topology generated using the center of mass locations and anthropometric data. MBDyn has an option for prescribed joint motion (PJM), which requires joint acceleration data as input. The joint angle data is first obtained from a motion capture system and then processed through code that has been created to generate approximate joint acceleration profiles. The topology tree for the astronaut model begins at the right foot up to the pelvis where there is one branch for going down the left leg and another for the torso. The torso branch leads to branches for the arms and a leaf body for the head/neck segment. For attachment to the VIS, the heel of the right foot is connected to the VIS platform through a fixed joint, resembling a foot restraint. The left foot does not attach to the platform in order to prevent a system with a closed loop. Topology and symmetry of the astronaut model were verified through kinematic analysis. Further verification of the forces and moments transmitted to the VIS were verified against the existing simulation. There was a satisfactory level of agreement when testing a simple motion, for example, rocking back and forth. Full exercise motions are to be tested soon. The main outcome has been a novel application of MBDyn for biomechanics modeling that is now available for dynamic simulations involving human motion. The estimation of BSIP was another useful result of this study, requiring only 15 inputs for generating mass properties of a theoretical astronaut model. Expansion on this work is possible by going through an alternative route in obtaining the joint motion data. Instead of high-tech and often expensive motion capture systems, an individual may watch videos with high focus and at a slow motion for each individual segment in order to determine the initial and final time and angle for that specific degree of freedom. Synthetic trajectories may also be created if there is no video reference available.

F N Matari↗
NASA NTRSDate not supplied

Space Flown Rodent Liver RNA Sequencing Data for Machine Learning in Space Biology Research

High-throughput nucleic acid sequencing (DNA-seq, RNA-seq) has become widespread in biomedical research due to the growing availability and affordability of these assays. Data analysis has been accelerated in recent years by the adoption of artificial intelligence (AI) and machine learning (ML) techniques by biomedical researchers. In space biology research, RNAseq datasets from space-flown experimental samples are critical for characterizing the gene expression aberrations associated with exposure to spaceflight stressors. However, space biological experiments tend to be very low sample size, so identifying proper AI/ML algorithms for sequencing data analysis is an ongoing challenge since these algorithms typically require large sample size. The NASA Science Mission Directorate (SMD) has started the “Benchmark Initiative for AI/ML”, focused on creating datasets meant for three main applications: 1) scientific benchmarking, which finds the best algorithm for a specific problem; 2) application benchmarking, which measures algorithm performance against a set of parameters; and 3) system benchmarking, which evaluates performance of hardware and software architecture. These scientific benchmarks consist of an AI-ready dataset and a reference implementation on a specific scientific question. In this work, we focused on generating standardized datasets to allow the scientific community to benchmark AI/ML algorithms in the domain of space biology. We present here a standardized, AI-ready, publicly available benchmark dataset for space biology RNA-seq data as a collaboration between the NASA AI4LS (Artificial Intelligence for Life Sciences) working group. and NASA’s SMD. This dataset consists of space-flown and ground control mouse liver found in the NASA GeneLab omics database. However, to amplify the small sample number (n=112 samples) for ML purposes, we employ Gaussian noise and a generative adversarial network to extend this dataset to 6,000 synthetic samples, matching the original gene expression characteristics.

James Casaletto↗