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At least 73 records · Page 4

Situational Lightning Climatologies for Central Florida: Phase III

This report describes work done by the Applied Meteorology Unit (AMU) to add composite soundings to the Advanced Weather Interactive Processing System (AWIPS). This allows National Weather Service (NWS) forecasters to compare the current atmospheric state with climatology. In a previous phase, the AMU created composite soundings for four rawinsonde observation stations in Florida, for each of eight flow regimes. The composite soundings were delivered to the NWS Melbourne (MLB) office for display using the NSHARP software program. NWS MLB requested that the AMU make the composite soundings available for display in AWIPS. The AMU first created a procedure to customize AWIPS so composite soundings could be displayed. A unique four-character identifier was created for each of the 32 composite soundings. The AMU wrote a Tool Command Language/Tool Kit (TcVTk) software program to convert the composite soundings from NSHARP to Network Common Data Form (NetCDF) format. The NetCDF files were then displayable by AWIPS.

Barrett, Joe H., III↗

Displaying Composite and Archived Soundings in the Advanced Weather Interactive Processing System

This presentation describes work done by the Applied Meteorology Unit (AMU) to add composite soundings to the Advanced Weather Interactive Processing System (AWIPS). This allows National Weather Service (NWS) forecasters to compare the current atmospheric state with climatology. In a previous task, the AMU created composite soundings for four rawinsonde observation stations in Florida, for each of eight flow regimes. The composite soundings were delivered to the NWS Melbourne (MLB) office for display using the NSHARP software program. NWS MLB requested that the AMU make the composite soundings available for display in AWIPS. The AMU first created a procedure to customize AWIPS so composite soundings could be displayed. A unique four-character identifier was created for each of the 32 composite soundings. The AMIU wrote a Tool Command Language/Tool Kit (TclITk) software program to convert the composite soundings from NSHARP to Network Common Data Form (NetCDF) format. The NetCDF files were then displayable by AWIPS.

Barrett, Joe H., III↗

Improving the Accessibility and Use of NASA Earth Science Data

Many of the NASA Langley Atmospheric Science Data Center (ASDC) Distributed Active Archive Center (DAAC) multidimensional tropospheric and atmospheric chemistry data products are stored in HDF4, HDF5 or NetCDF format, which traditionally have been difficult to analyze and visualize with geospatial tools. With the rising demand from the diverse end‐user communities for geospatial tools to handle multidimensional products, several applications, such as ArcGIS, have refined their software. Many geospatial applications now have new functionalities that enable the end user to: Store, serve, and perform analysis on each individual variable, its time dimension, and vertical dimension. Use NetCDF, GRIB, and HDF raster data formats across applications directly. Publish output within REST image services or WMS for time and space enabled web application development. During this webinar, participants will learn how to leverage geospatial applications such as ArcGIS, OPeNDAP and ncWMS in the production of Earth science information, and in increasing data accessibility and usability.

Tisdale, Matthew↗

SatCORPS Global Cloud Composite (GCC): the Design and Delivery of A High Quality, High Resolution, Global Cloud Product Available in Near-Real Time

The NASA Satellite ClOud and Radiation Property retrieval System (SatCORPS) supports the development of an analysis ready and cloud-optimized data transformation pipeline and geospatial service enablement of a global cloud composite (GCC) product derived from global geostationary satellite imagery. This geospatial service will be available at high temporal and spatial resolution via the SatCORPS web mapping application for visualization and analysis as well as direct ingestion to common geospatial software and custom programming. The resulting global cloud composite products from the processing pipeline can then be geospatially-service enabled as ArcGIS Image Services and Open Geospatial Consortium (OGC) Web Mapping/Coverage Services for visualization and analysis via a web mapping application and common geospatial software. Near real time global observations are created through the composition of five geostationary satellites that provides modelling and forecasting communities with the capability to provide high quality and timely information to start the projection process. The Global Cloud Composite product combines information from geostationary satellites, GOES-16, GOES-17, Himawari-8, Meteosat-11 and Meteosat-9 to create a single global composite netcdf file and images using the different products within the netcdf file. The SatCORPS team, though our Global Cloud Composite (GCC) product and web-based visualization tools including Geographical Information System (GIS) services provide near real time global cloud product information to both automated processes and traditional web users that is timely and high quality derived from geostationary satellites. The Global Cloud Composite product takes advantage of the scalable processing resources provided by the AWS batch service to provide new composites every thirty minutes. Because information from each of the low earth orbiting satellites is available on schedules tuned to the specific satellite, the processing algorithm temporally composites the final dataset as each satellite’s information becomes available. The SatCORPS team has leveraged our experience using Amazon Web Services (AWS) to build a low latency high availability tool that allows end users both human and automated to acquire high quality and high-resolution Geostationary Earth Orbiting (GEO) information at zero cost to the end user. This presentation will describe how we architected and implemented the service as well as lessons learned based on our experiences both developing and operating the system. The lessons learned include how we integrated multiple services including Amazon Batch, Amazon S3 and Amazon Lambda service to create a low cost but high-performance processing system that is capable of identifying and processing the most appropriate satellite overpass information into global cloud composites. We will also describe our web-based tools including our Geographic Information System that can be used for visualization and analysis. The products from the processing can be geospatially-service enabled as ArcGIS Image Services and Open Geospatial Consortium (OGC) Web Mapping/Coverage Services for visualization and analysis via a web mapping application and common geospatial software. The SatCORPS Global Composite Cloud product provides sophisticated global composited cloud research products with very low latency that we see that as filling a rapidly growing need in the research and modelling community with no up-front nor ongoing costs associated with downloading or using the information.

AWS AMCE SMCE GCC SATCORPS GLOBAL CLOUD COMPOSITE ↗

Interoperability and Other Aspects of Guiding Data Producers for the Benefit of End Users

The purpose of this paper is to discuss how the Climate and Forecast (CF) Metadata Conventions and netCDF standard have influenced the recommendations and guidance provided to producers of data products based on NASA’s Earth observations. It has been long-recognized that interoperable datasets and use of standards and conventions are beneficial to the users of these datasets, especially those who make use of multiple datasets for their research and applications. The Dataset Interoperability Working Group (DIWG), one of NASA’s Earth Science Data System Working Groups (ESDSWGs), was established in 2013, and has developed and published many recommendations. The Data Product Development Guide (DPDG) Working Group, established in 2018 as another of the ESDSWGs, has published a DPDG for Data Producers and a Quick Start Guide, incorporating guidance from many sources, including the recommendations from the DIWG. The DPDG includes recommendations regarding data formats (prominently netCDF-4) and metadata based primarily on the CF Metadata Conventions and the Attribute Convention for Data Discovery (ACDD). In early 2023, it was decided that the Resource Center for Data Producers (RCDP) Working Group be established as another ESDSWG, with the goals of providing all the information relevant and helpful for data producers via an easily accessible website, and of recommending how the DPDG and QSG could be maintained as living documents, given the rapidly changing technologies, and the need for incorporating the experience and feedback from the users of these documents.

Data product development↗

Making NASA GES DISC Level 2 Data GIS Analysis Ready

There are many valuable data hosted by NASA Goddard Earth Sciences Data and Information Services Center (GES DISC) for GIS applications in the areas of extreme weather events, climatic anomaly, and public health. However, using NASA Earth Science Data poses some challenges for GIS users. Many of these users are not experts in Earth Observation and have little knowledge about NASA's Earth science data. In the GIS community, GeoTiff is the most widely used raster format, whereas NASA's data is primarily in complex multidimensional netCDF and HDF formats. This complexity makes it difficult for GIS users, especially those who are unfamiliar with these formats. Although GIS software like ArcGIS has made progress in processing multidimensional netCDF data, certain issues still remain, particularly with level 2 data. In this study, we use TROPSpheric Monitoring instrument (TROPOMI) level 2 data as an example to demonstrate how to make such data GIS analysis ready. The process involves: 1. Creating a feature layer from the TROPOMI level 2 data. 2. Converting the feature layer to a gridded raster dataset. 3. Mosaicking gridded raster datasets into a raster dataset covering the entire desired extent. 4. Generating a symbology with a GIBS-specific style that aligns with the visual standards and requirements of GIBS. 5. Publishing image services. By performing these preprocessing and transformation steps, NASA level 2 data can be made compatible and ready for use within GIS software for various spatial analysis and visualization tasks.

Geographic Information System↗

Stride Search v. 1.0

Stride Search provides a flexible tool for detecting storms or other extreme climate events in high-resolution climate data sets saved on uniform latitude-longitude grids in standard NetCDF format. Users provide the software a quantitative description of a meteorological event they are interested in; the software searches a data set for locations in space and time that meet the user’s description. In its first stage, Stride Search performs a spatial search of the data set at each timestep by dividing a search domain into circular sectors of constant geodesic radius. Data from a netCDF file is read into memory for each circular search sector. If the data meet or exceed a set of storm identification criteria (defined by the user), a storm is recorded to a linked list. Finally, the linked list is examined and duplicate detections of the same storm are removed and the results are written to an output file. The first stage’s output file is read by a second program that builds storm. Additional identification criteria may be applied at this stage to further classify storms. Storm tracks are the software’s ultimate output and routines are provided for formatting that output for various external software libraries for plotting and tabulating data.

Bosler, Peter↗

Accelerated Climate Model for Energy (Final Report)

The E3SM (formerly ACME) project utilizes the netCDF Operator (NCO) toolkit to generate, regrid, and split climate datasets for pre- and post-processing analysis. NCO tools are themselves embedded in the E3SM-unified, E3SM-diags, A-Prime, MPAS-Analysis, Processflow, and LIVVkit diagnostic suites, and so improve and leverage the analysis and diagnostics capabilities of the E3SM Science and Infrastructure teams. In this project, the UCI team extended and customized NCO features used standalone and by the diagnostic suites to accelerate and ease analysis and distribution of E3SM experiments. With supplementary funding, the UCI team also contributed physical improvements to the treatment of snow in the E3SM land, land-ice, and sea-ice model components.

54 ENVIRONMENTAL SCIENCES↗

Parallel membership queries on very large scientific data sets using bitmap indexes

© 2019 John Wiley & Sons, Ltd. Many scientific applications produce very large amounts of data as advances in hardware fuel computing and experimental facilities. Managing and analyzing massive quantities of scientific data is challenging as data are often stored in specific formatted files, such as HDF5 and NetCDF, which do not offer appropriate search capabilities. In this research, we investigated a special class of search capability, called membership query, to identify whether queried elements of a set are members of an attribute. Attributes that naturally have classification values appear frequently in scientific domains such as category and object type as well as in daily life such as zip code and occupation. Because classification attribute values are discrete and require random data access, performing a membership query on a large scientific data set creates challenges. We applied bitmap indexing and parallelization to membership queries to overcome these challenges. Bitmap indexing provides high performance not only for low cardinality attributes but also for high cardinality attributes, such as floating-point variables, electric charge, or momentum in a particle physics data set, due to compression algorithms such as Word-Aligned Hybrid. We conducted experiments, in a highly parallelized environment, on data obtained from a particle accelerator model and a synthetic data set.

Yildiz, Beytullah↗

Domain-Specific Type-Safe APIs for Hierarchical Scientific Data with Modern C++

General-purpose library application programming interfaces (APIs) for self-describing hierarchical scientific data storage, such as the HDF5 and NetCDF libraries, are traditionally of runtime nature. Runtime errors for entry existence and data types are typically caught later in the development process of higher-level application-specific APIs. In this paper, we propose exploiting modern C++ metaprogramming features to add compile-time type-safety to improve the interaction with a well-defined metadata-rich scientific schema in domain-specific hierarchical datasets. We tackle two aspects of common use: (i) direct data access, (ii) flexible “in-memory” index models for efficient search and data processing. The proposed APIs use C++17’s template type auto deduction features, C++11’s enum class for type-safety and C-style preprocessor macros for generative templated code. We showcase the pros and cons of our initial work on the standard NeXus schema used for annotating and storing experimental neutron scattering data at several facilities around the world on top of HDF5. Extendable compile-time type-safe APIs are a desirable feature that could be indexed by any modern integrated development environment (IDE). Hence, such APIs can help ease the learning curve for domain scientists using a less error-prone software interaction to enhance the findability of their data without resorting to a domain-specific language (DSL).

Godoy, William↗

Enhancing Discoverability and Management of Atmospheric Data at Scale: Solutions from the ARM Data Center

The Atmospheric Radiation Measurement (ARM) is a multi-laboratory and multi-institutional U.S. Department of Energy (DOE) Office of Science National User Facility. The ARM Data Center (ADC), located at Oak Ridge National Laboratory, collects, archives, and shares vast atmospheric data crucial for climate research. The ADC manages over 7 PB of data from 460 instruments worldwide, processing it into more than 11,000 diverse data products using the Network Common Data Form (NetCDF) for machine-independent accessibility. The primary challenge addressed in this paper is the efficient management and distribution of vast and diverse datasets essential for the climate research community, enhancing accessibility through advanced tools like Data Discovery. The ADC has developed advanced infrastructure and software architecture to handle the continuous influx of heterogeneous data to enhance data discoverability, resulting in increased scientific collaboration. In 2023, users from over 34 countries downloaded and utilized ARM data, resulting in 1,455 publications. The ADC’s efforts have significantly improved the discoverability and usability of atmospheric data, fostering extensive scientific research and collaboration. This paper details the solutions implemented by the ADC team for efficient data discovery and distribution, and it demonstrates ARM’s capability of staging processed data for scientific analysis.

Shah, Chirag [ORNL] (ORCID:0000000203145737)↗

DaYu: Optimizing Distributed Scientific Workflows by Decoding Dataflow Semantics and Dynamics

The combination of ever-growing scientific datasets and distributed workflow complexity creates I/O performance bottlenecks due to data volume, velocity, and variety. Although the increasing use of descriptive data formats (e.g., HDF5, netCDF) helps organize these datasets, it also creates obscure bottlenecks due to the need to translate high level operations into file addresses and then into low-level I/O operations. To address this challenge, we introduce DaYu, a method and toolset for analyzing (a) semantic relationships between logical datasets and file addresses, (b) how dataset operations translate into I/O, and (c) the combination across entire workflows. DaYu's analysis and visualization enables identification of critical bottlenecks and reasoning about remediation. We describe our methodology and propose optimization guidelines. Evaluation on scientific workflows demonstrates up to 3.7x performance improvements in I/O time for obscure bottlenecks. The time and storage overhead for DaYu's time-ordered data is typically under 0.2% of runtime and 0.25% of data volume, respectively.

Tang, Meng↗

Quick n Dirty

QnD is a pure Python package for working with binary files. It has built-in support for HDF5, NetCDF3, and PDB formats. It provides a Pythonic, dict-like interface, and allows easy movement among time-like "records". Both reading and writing are enabled. The HDF and NetCDF capabilities rely on external libraries, while the PDB support is part of QnD itself and entirely in Python. QnD works under Python 2 and 3. For interactive use, much less typing is involved than for some other packages.

MUNRO, DavidH.↗

Adapt: A Weather Radar Data Analysis and Nowcasting Platform for Informed Adaptive Scanning

SF-26-021 Adapt is a data processing platform for real-time data analysis, short term prediction of targets convective cells and tracking for archived data. It provides tools for downloading, processing, segmenting, projecting, analyzing, and visualizing storm cell data from weather radar. The pipeline includes cell detection, motion estimation using optical flow, cell property extraction, and persistence to NetCDF and SQLite/Parquet for guiding adaptive scanning.

Raut, Bhupendra Ashokrao [Argonne National Laborat↗

Scientific Core Library Stack (SCLS) v2026

SCLS (Scientific Core Library Stack) is an opinionated build and packaging system for scientific computing libraries developed at Lawrence Berkeley National Laboratory. It produces a coherent, reproducible stack of numerical libraries — including BLAS/LAPACK, MPI, sparse direct and iterative solvers, graph partitioners, and parallel I/O libraries (e.g., PETSc, SLEPc, HDF5, NetCDF, MUMPS, OpenBLAS) — that work together without manual repair by downstream scientific software. From a single recipe-and-flavor model, SCLS produces native RPM packages for RHEL-family Linux, DEB packages for Debian/Ubuntu, direct Unix-style prefix installs for HPC and locked-down environments, and native macOS builds. Multiple build "flavors" (e.g., GCC+OpenBLAS, GCC+MKL, Intel+MKL, debug) coexist in distinct prefixes on the same host. Compared to general-purpose meta-build frameworks, SCLS is deliberately curated rather than infinitely configurable. It enforces deterministic, audit-friendly behavior: explicit build dependencies, no silent feature autodetection, a clear open-source license policy, and rpath-based runtime linkage so installs integrate cleanly with standard package-manager workflows.

Messe, Christian [Lawrence Berkeley National Labor↗

Simulated Land Allocation, Nitrogen Use, and Nitrogen Loss in the Mississippi Atchafalaya River Basin for Various RFS2 (Renewable Fuel Standard) Policy Scenarios

Total nitrogen leaching rates were calculated over the Mississippi Atchafalaya River Basin (MARB) using an integrated economic-biophysical modeling approach. Land allocation for corn production and total nitrogen application rates were calculated for crop reporting districts using the Biofuel and Environmental Policy Analysis Model (BEPAM) for 5 RFS2 policy scenarios. These were used as input in the Integrated BIosphere Simulator-Agricultural Version (Agro-IBIS) and the Terrestrial Hydrologic Model with Biogeochemistry (THMB) to calculate the nitrogen loss. Land allocation and total nitrogen application simulations were simulated for the period 2016-2030 for 303 crop reporting districts (https://www.nass.usda.gov/Data_and_Statistics/County_Data_Files/Frequently_Asked_Questions/county_list.txt). The final 2030 values are reported here. Both are stored in csv files. Units for land allocation are million ha and nitrogen application are million kg. The nitrogen leaching rates were modeled with a spatial resolution of 5' x 5' using the North American Datum of 1983 projection and stored in NetCDF files. The 30-year average is calculated over the last 30 years of the 45 years being simulated. Leaching rates are calculated in kg-N/ha.

bioenergy crops↗

Data for The impact of aerosol mixing state on immersion freezing: Insights from classical nucleation theory and particle-resolved simulations

This dataset contains the values directly shown in the figures of the article "The impact of aerosol mixing state on immersion freezing: Insights from classical nucleation theory and particle-resolved simulations". This article is in preparation for submission to the journal Atmospheric Chemistry and Physics. The dataset consists of 12 NetCDF files processed from the raw output of the PartMC model. It does not include the theoretical values of frozen fraction, which can be computed using the equations provided in the paper. *New in V2: adding data for a newly included figure (INP_spectrum.nc), removing files that are no longer used in the revised manuscript figures (e.g., UNC_A_ratio=0.9_Dp=0.1.nc, UNC_A_ratio=0.9_Dp=10.0.nc, UNC_A_ratio=0.1_Dp=0.1.nc, and UNC_A_ratio=0.1_Dp=10.0.nc), and updating README.pdf accordingly.

Aerosol mixing state↗