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All sourcesNASA NTRSDOE OSTI
DOE OSTI2022

Identifying Transient Candidates in the Dark Energy Survey Using Convolutional Neural Networks

The ability to discover new transient candidates via image differencing without direct human intervention is an important task in observational astronomy. For these kind of image classification problems, machine learning techniques such as Convolutional Neural Networks (CNNs) have shown remarkable success. In this work, we present the results of an automated transient candidate identification on images with CNNs for an extant data set from the Dark Energy Survey Supernova program, whose main focus was on using Type Ia supernovae for cosmology. By performing an architecture search of CNNs, we identify networks that efficiently select non-artifacts (e.g., supernovae, variable stars, AGN, etc.) from artifacts (image defects, mis-subtractions, etc.), achieving the efficiency of previous work performed with random Forests, without the need to expend any effort in feature identification. The CNNs also help us identify a subset of mislabeled images. Performing a relabeling of the images in this subset, the resulting classification with CNNs is significantly better than previous results, lowering the false positive rate by 27% at a fixed missed detection rate of 0.05.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2023

Astronomical image time series classification using CONVolutional attENTION (ConvEntion)

Aims: The treatment of astronomical image time series has won increasing attention in recent years. Indeed, numerous surveys following up on transient objects are in progress or under construction, such as the Vera C. Rubin Observatory Legacy Survey for Space and Time (LSST), which is poised to produce huge amounts of these time series. The associated scientific topics are extensive, ranging from the study of objects in our galaxy to the observation of the most distant supernovae for measuring the expansion of the universe. With such a large amount of data available, the need for robust automatic tools to detect and classify celestial objects is growing steadily. Methods: This study is based on the assumption that astronomical images contain more information than light curves. In this paper, we propose a novel approach based on deep learning for classifying different types of space objects directly using images. We named our approach ConvEntion, which stands for CONVolutional attENTION. It is based on convolutions and transformers, which are new approaches for the treatment of astronomical image time series. Our solution integrates spatio-temporal features and can be applied to various types of image datasets with any number of bands. Results: In this work, we solved various problems the datasets tend to suffer from and we present new results for classifications using astronomical image time series with an increase in accuracy of 13%, compared to state-of-the-art approaches that use image time series, and a 12% increase, compared to approaches that use light curves.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2024

Hybrid Quantum Vision Transformers for Event Classification in High Energy Physics

Models based on vision transformer architectures are considered state-of-the-art when it comes to image classification tasks. However, they require extensive computational resources both for training and deployment. The problem is exacerbated as the amount and complexity of the data increases. Quantum-based vision transformer models could potentially alleviate this issue by reducing the training and operating time while maintaining the same predictive power. Although current quantum computers are not yet able to perform high-dimensional tasks, they do offer one of the most efficient solutions for the future. In this work, we construct several variations of a quantum hybrid vision transformer for a classification problem in high-energy physics (distinguishing photons and electrons in the electromagnetic calorimeter). We test them against classical vision transformer architectures. Our findings indicate that the hybrid models can achieve comparable performance to their classical analogs with a similar number of parameters.

Unlu, Eyup B. (ORCID:0000000266836463)↗
DOE OSTI2024

DECIDER

This software offers methods and functions for building failure detectors for deep image classification models with the aid of vision-language models and LLMs. It includes functionalities for training baseline image classifiers, debiasing classifiers using vision-language models and LLMs, evaluating failure between models along with baselines. Developed using PyTorch, this software is compatible with standard neural network architectures used for imaging data. Additionally, it provides capabilities to compute evaluation metrics for assessing the performance and quality of the detectors.

Narayanaswamy, Vivek Sivaraman↗
DOE OSTI2022

A deep learning approach to real-time HIV outbreak detection using genetic data

Pathogen genomic sequence data are increasingly made available for epidemiological monitoring. A main interest is to identify and assess the potential of infectious disease outbreaks. While popular methods to analyze sequence data often involve phylogenetic tree inference, they are vulnerable to errors from recombination and impose a high computational cost, making it difficult to obtain real-time results when the number of sequences is in or above the thousands. Here, we propose an alternative strategy to outbreak detection using genomic data based on deep learning methods developed for image classification. The key idea is to use a pairwise genetic distance matrix calculated from viral sequences as an image, and develop convolutional neutral network (CNN) models to classify areas of the images that show signatures of active outbreak, leading to identification of subsets of sequences taken from an active outbreak. We showed that our method is efficient in finding HIV-1 outbreaks with R0 ≥ 2.5, and overall a specificity exceeding 98% and sensitivity better than 92%. We validated our approach using data from HIV-1 CRF01 in Europe, containing both endemic sequences and a well-known dual outbreak in intravenous drug users. Our model accurately identified known outbreak sequences in the background of slower spreading HIV. Importantly, we detected both outbreaks early on, before they were over, implying that had this method been applied in real-time as data became available, one would have been able to intervene and possibly prevent the extent of these outbreaks. This approach is scalable to processing hundreds of thousands of sequences, making it useful for current and future real-time epidemiological investigations, including public health monitoring using large databases and especially for rapid outbreak identification.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

Convolutional Neural Networks Based Remote Sensing Scene Classification under Clear and Cloudy Environments

Remote sensing (RS) scene classification has wide applications in the environmental monitoring and geological survey. In the real-world applications, the RS scene images taken by the satellite might have two scenarios: clear and cloudy environments. However, most of existing methods did not consider these two environments simultaneously. In this paper, we assume that the global and local features are iscriminative in either clear or cloudy environments. Many existing Convolution Neural Networks (CNN) based models have made excellent achievements in the image classification, however they somewhat ignored the global and local features in their network structure. In this paper, we propose a new CNN based network (named GLNet) with the Global Encoder and Local Encoder to extract the discriminative global and local features for the RS scene classification, where the constraints for inter-class dispersion and intra-class compactness are embedded in the GLNet training. The experimental results on two publicized RS scene classification datasets show that the proposed GLNet could achieve better performance based on many existing CNN backbones under both clear and cloudy environments.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2023

Experimental Observations of the Topology of Convolutional Neural Network Activations

Topological data analysis (TDA) is a branch of computational mathematics, bridging algebraic topology and data science, that provides compact, noise-robust representations of complex structures. Deep neural networks (DNNs) learn millions of parameters associated with a series of transformations defined by the model architecture resulting in high-dimensional, difficult to interpret internal representations of input data. As DNNs become more ubiquitous across multiple sectors of our society, there is increasing recognition that mathematical methods are needed to aid analysts, researchers, and practitioners in understanding and interpreting how these models' internal representations relate to the final classification. In this paper we apply cutting edge techniques from TDA with the goal of gaining insight towards interpretability of convolutional neural networks used for image classification. We use two common TDA approaches to explore several methods for modeling hidden layer activations as high-dimensional point clouds, and provide experimental evidence that these point clouds capture valuable structural information about the model's process. First, we demonstrate that a distance metric based on persistent homology can be used to quantify meaningful differences between layers and discuss these distances in the broader context of existing representational similarity metrics for neural network interpretability. Second, we show that a mapper graph can provide semantic insight as to how these models organize hierarchical class knowledge at each layer. These observations demonstrate that TDA is a useful tool to help deep learning practitioners unlock the hidden structures of their models.

topological data analysis, deep learning↗
DOE OSTI2021

Rotational Equivariance for Object Classification Using xView

With the recent addition of large, curated and labeled data sets to the remote sensing discipline, deep learning models have largely surpassed the performance of classical techniques. These deep models, typically Convolutional Neural Networks, are invariant to translation through the use of successive convolution layers which are themselves equivariant to translation. Further, the combination of multiple convolution and pooling layers means that in practice, the model is also approximately invariant to translation. However, until recently these models could only approach rotational invariance through data augmentation. Here we propose using a new model formulation which achieves rotational equaivariance without data augmentation for overhead imagery classification. We utilize the popular xView data set to compare the rotational equivariance formalization against a regular CNN and CNN with rotational data augmentation for the task of image classification.

Bynum, Lucius EJ↗
DOE OSTI2020

Interactive Visual Study of Multiple Attributes Learning Model of X-Ray Scattering Images

Existing interactive visualization tools for deep learning are mostly applied to the training, debugging, and refinement of neural network models working on natural images. However, visual analytics tools are lacking for the specific application of x-ray image classification with multiple structural attributes. In this paper, we present an interactive system for domain scientists to visually study the multiple attributes learning models applied to x-ray scattering images. It allows domain scientists to interactively explore this important type of scientific images in embedded spaces that are defined on the model prediction output, the actual labels, and the discovered feature space of neural networks. Users are allowed to flexibly select instance images, their clusters, and compare them regarding the specified visual representation of attributes. The exploration is guided by the manifestation of model performance related to mutual relationships among attributes, which often affect the learning accuracy and effectiveness. The system thus supports domain scientists to improve the training dataset and model, find questionable attributes labels, and identify outlier images or spurious data clusters. Case studies and scientists feedback demonstrate its functionalities and usefulness.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2023

Know Your Space: Inlier and Outlier Construction for Calibrating Medical OOD Detectors

This software offers methods and functions for training calibrated out-of-distribution detectors for medical image classification tasks. It includes functionalities for training, synthesizing data augmentations, calibration, and out-of-distribution detection. Developed using PyTorch, this software is compatible with standard neural network architectures used for imaging data. Additionally, it provides capabilities to compute evaluation metrics for assessing the performance and quality of the detectors.

Narayanaswamy, VivekSivaraman↗
DOE OSTI2024

On the nature of apparent transient sources on the National Geographic Society–Palomar Observatory Sky Survey glass copy plates

Abstract We examine critically recent claims for the presence of above-atmosphere optical transients in publicly available digitized scans of Schmidt telescope photographic plate material derived from the National Geographic Society–Palomar Observatory Sky Survey. We employ the publicly available SuperCOSMOS Sky Survey catalogues to examine statistically the morphology of the sources. We develop a simple, objective, and automated image classification scheme based on a random forest decision tree classifier. We find that the putative transients are likely to be spurious artefacts of the photographic emulsion. We suggest a possible cause of the appearance of these images as resulting from the copying procedure employed to disseminate glass copy survey atlas sets in the era before large-scale digitization programmes.

Hambly, N. C. (ORCID:0000000299019064)↗
DOE OSTI2020

How Low Can You Go? Using Synthetic 3D Imagery to Drastically Reduce Real-World Training Data for Object Detection

Deep convolutional neural networks (DCNNs) currently provide state-of-the-art performance on image classification and object detection tasks, and there are many global security mission areas where such models could be extremely useful. Crucially, the success of these models is driven in large part by the widespread availability of high-quality open source data sets such as Image Net, Common Objects in Context (COCO), and KITTI, which contain millions of images with thousands of unique labels. However, global security relevant objects-of-interest can be difficult to obtain: relevant events are low frequency and high consequence; the content of relevant images is sensitive; and adversaries and proliferators seek to obscure their activities. For these cases where exemplar data is hard to come-by, even fine-tuning an existing model with available data can be effectively impossible. Recent work demonstrated that models can be trained using a combination of real-world and synthetic images generated from 3D representations; that such models can exceed the performance of models trained using real-world data alone; and that the generated images need not be perfectly realistic (Tremblay, et al., 2018). However, this approach still required hundreds to thousands of real-world images for training and fine tuning, which for sparse, global security-relevant datasets can be an unrealistic hurdle. In this research, we validate the performance and behavior of DCNN models as we drive the number of real-world images used for training object detection tasks down to a minimal set. We perform multiple experiments to identify the best approach to train DCNNs from an extremely small set of real-world images. In doing so, we: Develop state-of-the-art, parameterized 3D models based on real-world images and sample from their parameters to increase the variance in synthetic image training data; Use machine learning explainability techniques to highlight and correct through targeted training the biases that result from training using completely synthetic images; and Validate our results by comparing the performance of the models trained on synthetic data to one another, and to a control model created by fine-tuning an existing ImageNet-trained model with a limited number (hundreds) of real-world images.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2025

Towards AI Based Data Classification for Decision Making During Testing

During the development of high-consequence items, test systems should be capable of differentiating between test failures resulting from narrowly missing requirements versus those indicating potentially catastrophic faults. In many instances, classifying the data corresponds to simply identifying whether measured waveforms have approximately the anticipated shape. Cast in this light, the problem reduces to converting raw data into a form optimal for use with neural network classifiers. This manuscript investigates different means of representing raw data for image classification. Raw data plots and Short Time Fourier Transform (STFT) spectrograms are classified by both custom built, small-scale, Convolution Neural Networks (CNN) and open-source, multi-million parameter, pre-trained deep CNNs. In the case of time varying frequency content, the STFTs provide images with greater detail and can be accurately classified with simpler networks. This requires less memory and runs faster than classifying the raw data using the more sophisticated options—making STFTs optimal for applications with memory constraints. STFTs are not a panacea. In some cases the time-domain signal contains useful information that should not be discarded. Rather than using raw data or STFTs, the images can be constructed from both by using red and green channels of an RGB image to visualize the real and imaginary components of the transform, with the raw data occupying the blue channel.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2022

Image feature extraction and galaxy classification: a novel and efficient approach with automated machine learning

ABSTRACT In this work, we explore the possibility of applying machine learning methods designed for 1D problems to the task of galaxy image classification. The algorithms used for image classification typically rely on multiple costly steps, such as the point spread function deconvolution and the training and application of complex Convolutional Neural Networks of thousands or even millions of parameters. In our approach, we extract features from the galaxy images by analysing the elliptical isophotes in their light distribution and collect the information in a sequence. The sequences obtained with this method present definite features allowing a direct distinction between galaxy types. Then, we train and classify the sequences with machine learning algorithms, designed through the platform Modulos AutoML. As a demonstration of this method, we use the second public release of the Dark Energy Survey (DES DR2). We show that we are able to successfully distinguish between early-type and late-type galaxies, for images with signal-to-noise ratio greater than 300. This yields an accuracy of $86{{\ \rm per\ cent}}$ for the early-type galaxies and $93{{\ \rm per\ cent}}$ for the late-type galaxies, which is on par with most contemporary automated image classification approaches. The data dimensionality reduction of our novel method implies a significant lowering in computational cost of classification. In the perspective of future data sets obtained with e.g. Euclid and the Vera Rubin Observatory, this work represents a path towards using a well-tested and widely used platform from industry in efficiently tackling galaxy classification problems at the peta-byte scale.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2025

Quantum Transfer Learning to Boost Dementia Detection

Dementia is a devastating condition with profound implications for individuals, families, and healthcare systems. Early and accurate detection of dementia is critical for timely intervention and improved patient outcomes. While classical machine learning and deep learning approaches have been explored extensively for dementia prediction, these solutions often struggle with high-dimensional biomedical data and large-scale datasets, quickly reaching computational and performance limitations. To address this challenge, quantum machine learning (QML) has emerged as a promising paradigm, offering faster training and advanced pattern recognition capabilities. This work aims to demonstrate the potential of quantum transfer learning (QTL) to enhance the performance of a weak classical deep learning model applied to a binary classification task for dementia detection. Besides, we show the effect of noise on the QTL-based approach, investigating the reliability and robustness of this method. Using the OASIS 2 dataset, we show how quantum techniques can transform a suboptimal classical model into a more effective solution for biomedical image classification, highlighting their potential impact on advancing healthcare technology.

Bhowmik, Sounak [University of Tennessee, Knoxvill↗
DOE OSTI2024

Anchoring

This software provides methods and functions for training deep image classification models based on the principle of anchoring. It features a user-friendly PyTorch wrapper that facilitates the easy conversion of any model into an anchored model. The software supports various standard datasets and includes scripts for conducting evaluations. Developed with PyTorch, it is compatible with common neural network architectures used for image data. Additionally, it offers tools for computing evaluation metrics to assess model performance.

Narayanaswamy, Vivek Sivaraman↗
DOE OSTI2024

Quantifying leaf symptoms of sorghum charcoal rot in images of field‐grown plants using deep neural networks

Abstract Charcoal rot of sorghum (CRS) is a significant disease affecting sorghum crops, with limited genetic resistance available. The causative agent, Macrophomina phaseolina (Tassi) Goid, is a highly destructive fungal pathogen that targets over 500 plant species globally, including essential staple crops. Utilizing field image data for precise detection and quantification of CRS could greatly assist in the prompt identification and management of affected fields and thereby reduce yield losses. The objective of this work was to implement various machine learning algorithms to evaluate their ability to accurately detect and quantify CRS in red‐green‐blue images of sorghum plants exhibiting symptoms of infection. EfficientNet‐B3 and a fully convolutional network emerged as the top‐performing models for image classification and segmentation tasks, respectively. Among the classification models evaluated, EfficientNet‐B3 demonstrated superior performance, achieving an accuracy of 86.97%, a recall rate of 0.71, and an F1 score of 0.73. Of the segmentation models tested, FCN proved to be the most effective, exhibiting a validation accuracy of 97.76%, a recall rate of 0.68, and an F1 score of 0.66. As the size of the image patches increased, both models’ validation scores increased linearly, and their inference time decreased exponentially. This trend could be attributed to larger patches containing more information, improving model performance, and fewer patches reducing the computational load, thus decreasing inference time. The models, in addition to being immediately useful for breeders and growers of sorghum, advance the domain of automated plant phenotyping and may serve as a foundation for drone‐based or other automated field phenotyping efforts. Additionally, the models presented herein can be accessed through a web‐based application where users can easily analyze their own images.

Gonzalez, Emmanuel M.↗
DOE OSTI2026

VoroClust: Scalable Clustering for Remote Sensing

Although supervised machine learning provides a powerful framework for image classification and segmentation, it requires comprehensive consistent datasets, which are not available for many remote-sensing applications. Remote-sensing datasets are expensive to collect, and each is acquired under different environmental conditions or with significant variations in system operating parameters. Unsupervised clustering algorithms analyze the structure of each dataset independently, rather than drawing on similarities with existing “training” examples, and are thus well suited for practical remote-sensing applications. We introduce VoroClust, a fast density-based unsupervised clustering algorithm applicable to high-resolution and high-dimensional data. VoroClust runs as fast as distance-based clustering methods, while capturing complex regional geometries at least as well as current-density-based methods. It uses a data-centered sphere cover to reduce computational demands, while still capturing data topology. It then propagates clusters outward from local peaks in density. We show that VoroClust provides fast state-of-the-art clustering for both high-resolution polarimetric synthetic aperture radar and high-dimensional hyperspectral imaging datasets.

42 ENGINEERING↗