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Amorphous carbon nanotubes (a‐CNT) with up to four walls and sizes ranging from 200 to 3200 atoms have been simulated, starting from initial random configurations and using the Gaussian Approximation Potential. The important variables (like density, height, and diameter) required to successfully simulate a‐CNTs were predicted with the machine learning random forest technique. The width of the a‐CNT models ranged between 0.55–2 nm with an average inter‐wall spacing of 0.31 nm. The topological defects in a‐CNTs were analyzed and new defect configurations were observed. The electronic density of states and localization in these phases were discussed and delocalized electrons in the π subspace were identified as an important factor for inter‐layer cohesion. Spatial projection of the electronic conductivity favors axial transport along connecting hexagons, while non‐hexagonal parts of the network either hinder or bifurcate the electronic transport. A vibrational density of states was calculated and is potentially an experimentally comparable fingerprint of the material. The appearance of a low‐frequency radial breathing mode was discussed and the thermal conductivity at 300 K was estimated using the Green‐Kubo formula.
Abstract The effect of parametric decay instability (PDI) on the current drive efficiency of 4.6 GHz lower hybrid (LH) waves in EAST is investigated experimentally, showing the PDI channel bifurcation of LH waves for the first time in EAST. First, experiments with three platforms of LH power were performed, achieving the LH power required for the PDI occurrence. Second, PDI bifurcation experiments were further carried out by ramping up the plasma electron density. The loop voltage increases with an increase in density, implying a decrease in the current driven by the LH wave. PDI bifurcation during electron density ramp-up was studied by analyzing the parallel refractive index ( n ∥ ) and the frequency spectrum broadening, which is measured with a radio frequency magnetic probe array recently installed close to the LH antenna. It is observed for the first time that they both first increase with density, then there is not much variation and a clear sideband in the frequency spectrum is also observed when the density is up to 4 × 10 19 m − 3 , suggesting a change in the PDI channel. Calculation of the mode growth rate driven by PDI shows that when the edge electron density is up to 1.9 × 10 18 m − 3 , the growth rate of the ion cyclotron quasi-mode (ICQM) will exceed that of the ion sound quasi-mode (ISQM), quantitively explaining that with an increase in density, the PDI channel partly transits from the ISQM to the ICQM channel. Studies provide a possible way to reduce the power deposition in the edge region and improve drive capability by means of mitigating PDI behavior.
Abstract Last closed drift shell (LCDS) has been identified as a crucial parameter for investigating the magnetopause shadowing loss of radiation belt electrons. However, drift orbit bifurcation (DOB) effects have not been physically incorporated into the LCDS calculation. Here we calculate event‐specific LCDS using different approaches to dealing with the DOB effects, that is, tracing field lines ignoring DOB, tracing test particles rejecting field lines with DOB, and tracing particles including field lines with DOB, and then incorporate them into a radial diffusion model to simulate the fast electron dropout observed by Van Allen Probes in May 2017. The model effectively captures the fast dropout at high L* and exhibits the best agreement with data when LCDS is calculated by tracing test particles with DOB more physically included. This study represents the first quantitative modeling of the DOB effects on radiation belt magnetopause shadowing loss via a more physical specification of LCDS.
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The surface defined by the locus of field minima along field lines for an unterminated Jovian model magnetosphere is found to coincide with the surface of the model current disk which provides a good fit to the data. However, when the model is terminated by means of magnetopause currents, preservation of the fit by modifying the current distribution near the outer edge of the disk causes the minimum absolute magnetic field surface to bifurcate. Energetic electron flux time profiles that are based upon such a minimum absolute magnetic field configuration are found to be qualitatively consistent with the inbound Pioneer 10 data.
Here, bifurcation of the electron temperature perturbation (ΔT e ) in magnetic islands due to electron cyclotron current drive (ECCD) is reported for the first time in toroidal plasmas. In this DIIID experiment ΔT e spontaneously increases by 50% in a growing 2,1 island which in turn rapidly shrinks, consistent with improved stabilization by the ECCD due to the temperature bifurcation. This non-linearity of ΔT e maps out a hysteresis in the island evolution cycle, in qualitative agreement with the theoretically predicted radio frequency current condensation effect. Therefore, this observed bifurcation can be critical for the avoidance of disruptions caused by tearing modes in tokamaks.
ABSTRACT Hydrogenosomes are mitochondria-derived organelles that produce ATP and H 2 to support energy metabolism in anaerobic eukaryotes. H 2 production allows reoxidation of reduced cofactors generated during fermentative metabolism; however, the metabolic mechanisms for H 2 production in anaerobic eukaryotes remains incompletely understood. In particular, it remains unclear whether anaerobic fungi (AF) hydrogenosomes use a ferredoxin-dependent pathway or a distinct mechanism to regenerate NAD(P) + and link electron transfer to H 2 formation. Here, by combining genomic search, proteomic analysis, and enzymology, we reveal the molecular mechanism for H 2 production in the AF strain Caecomyces churrovis . Our enzyme assays on the organelle fraction of C. churrovis revealed the activity of H 2 :NAD + oxidoreductase but not pyruvate:ferredoxin oxidoreductase, which is usually linked to H 2 formation. We identified genes encoding [FeFe] hydrogenase (Hyd) and NADH dehydrogenase subunits E and F (NuoE, NuoF) in C. churrovis , and confirmed their expression in the isolated hydrogenosomal fractions by proteomic analysis. Combining the individually purified enzymes, we found Hyd and NuoEF proteins formed H 2 directly from NADH independently of ferredoxin, functioning as a non-bifurcating NADH-dependent enzyme rather than an electron-bifurcating enzyme. We identified homologs of hydrogenosomal NuoE, NuoF, and Hyd in many other AF, indicating this pathway is commonly shared among the AF. This work demonstrates the existence of a non-bifurcating NADH-dependent enzyme complex in eukaryotes. Moreover, this complex could potentially be exploited as a target for controlling AF H 2 production and altering fungal metabolism. IMPORTANCE H 2 production is a prominent feature of anaerobic energy metabolism, yet our understanding of eukaryotic mechanisms remains limited. Anaerobic fungi (AF) are key decomposers of lignocellulose and contribute to hydrogen flux in anaerobic environments. Although it has been more than 40 years since the H 2 production from AF was first reported, the molecular mechanism for hydrogenosomal H 2 production and redox balance remains unclear. We demonstrate that AF produce H 2 from NADH utilizing a non-bifurcating NADH-dependent enzyme complex rather than an electron-bifurcating, ferredoxin-dependent variant. We show that this enzyme complex is conserved across multiple AF lineages and thus demonstrate the occurrence of a non-bifurcating NADH-dependent enzyme in eukaryotes. This discovery expands our understanding of eukaryotic hydrogenosomal metabolism, reveals a previously unknown strategy for redox balancing, and highlights potential targets for manipulating H 2 production. These insights have broad implications for microbial energy metabolism, anaerobic ecosystems, and bioengineering of H 2 -producing systems.
A kinetic theory for the velocity distribution of solar wind electrons which illustrates the global and local properties of the solar wind expansion is proposed. By means of the Boltzmann equation with the Krook collision operator accounting for Coulomb collisions, it is found that Coulomb collisions determine the population and shape of the electron distribution function in both the thermal and suprathermal energy regimes. For suprathermal electrons, the cumulative effects of Coulomb interactions are shown to take place on the scale of the heliosphere itself, whereas the Coulomb interactions of thermal electrons occur on a local scale near the point of observation (1 AU). The bifurcation of the electron distribution between thermal and suprathermal electrons is localized to the deep solar corona (1 to 10 solar radii).
Biology uses relatively few electron-transfer cofactors, tuning their potentials, electronic couplings, and reorganization energies to carry out the required chemistry. It is remarkable that the potential ordering of two-electron transfer active flavins can be normal (first oxidation at low potential and second oxidation at high potential) or inverted, and the gap between the potentials can be as large as one volt. Analysis based on structural bioinformatics and electrostatics indicates that the ordering of the flavin redox potential is influenced by protein electrostatics. In all 36 flavoproteins examined, the introduction of a negative charge near the flavin in silico increases the extent of potential inversion (by lowering the electrochemical potential of the second electron-transfer step); the introduction of a positive charge near the flavin favors normally ordered potentials. We also find that the addition of positive charges increases the electrochemical potential for the naturally occurring one-electron transition in flavodoxins (between deprotonated hydroquinone and neutral semiquinone) and also increases the second one-electron transition in bifurcating flavins (between anionic semiquinone and fully oxidized flavin). Finally, we find that proximity of a proton acceptor, notably conserved arginine, supports proton-coupled electron transfer because it may act as a proton acceptor, promoting potential inversion. This key arginine residue may enable two-electron transfer chemistry by promoting the proton-coupled electron transfer process over the pure electron transfer process, suggesting how a protein's flavin environment may influence one- or two-electron chemistry in flavoproteins.
We describe a new instrument, the Argonne Auger Radioisotope Microscope (ARM), capable of characterizing the Auger electron (AE) emission of radionuclides, including candidates relevant in nuclear medicine. Our approach relies on event-by-event ion–electron coincidence, time-of-flight, and spatial readout measurement to determine correlated electron multiplicity and energy distributions of Auger decays. We present a proof-of-principle measurement with the ARM using x-ray photoionization of stable krypton beyond the K-edge and identify a bifurcation in the electron multiplicity distribution depending on the emission of K-LX electrons. Extension of the ARM to the characterization of radioactive sources of AE emissions is enabled by the combination of two recent developments: (1) cryogenic buffer gas beam technology to introduce Auger emitters into the detection region with well-defined initial conditions, and (2) large-area micro-channel plate detectors with multi-hit detection capabilities to simultaneously detect multiple electrons emitted in a single decay.
A detailed first principle kinetic theory for electrons which is neither a classical fluid treatment nor an exospheric calculation is presented. This theory illustrates the global and local properties of the solar wind expansion that shape the observed features of the electron distribution function, such as its bifurcation, its skewness and the differential temperatures of the thermal and suprathermal subpopulations. Coulomb collisions are substantial mediators of the interplanetary electron velocity distribution function and they place a zone for a bifurcation of the electron distribution function deep in the corona. The local cause and effect precept which permeates the physics of denser media is modified for electrons in the solar wind. The local form of transport laws and equations of state which apply to collision dominated plasmas are replaced with global relations that explicitly depend on the relative position of the observer to the boundaries of the system.
We study the formation of a very thin current sheet (CS) and associated plasma electrodynamics using three-dimensional (3-D) particle-in-cell simulations with ion to electron mass ratio M/m=1836. The CS is driven by imposed anti-parallel magnetic fields. The noteworthy features of the temporal evolution of the CS are the following: (i) Steepening of the magnetic field profile B,(z) in the central part of the CS, (ii) Generation of three-peak current distribution with the largest peak in the CS center as B,(z) steepens, (iii) Generation of converging electric fields forming a potential well in the CS center in which ions are accelerated. (iv) Electron and ion heating in the central part of the CS by current-driven instabilities (CDI). (v) Re-broadening of the CS due to increased kinetic plasma pressure in the CS center. (vi) Generation of electron temperature anisotropy with temperature perpendicular to the magnetic field being larger than the parallel one. (vii) Current disruption by electron trapping in an explosively growing electrostatic instability (EGEI) and electron tearing instability (ETI). (viii)The onset of EGEI coincides with an increase in the electron temperature above the temperature of the initially hot ions as well as the appearance of new shear in the electron drift velocity. (ix) Bifurcation of the central CS by the current disruption. (x) Magnetic reconnection (MR) beginning near the null in B, and spreading outward. (xi) Generation of highly energized electrons reaching relativistic speeds and having isotropic pitch-angle distribution in the region of reconnected magnetic fields. We compare some of these features of the current sheet with results from laboratory and space experiments.
Abstract Plasma confinement and transport in tokamaks play a crucial role in the development of high poloidal beta steady-state operation scenarios. Therefore, it is very important to study the relevant mechanism of internal transport barriers (ITBs), which can help plasmas to obtain better confinement in order to achieve higher fusion gain. This paper mainly introduces the analysis of the characteristics of electron heat transport of discharges with ITB in high β P operation regime in Experimental Advanced Superconducting Tokamak (EAST). Based on the statistical analysis of stable discharges with β P > 1.5, it is found that there is an obvious bifurcation of the normalised electron temperature gradient (ETG) ( R / L T e ) in the range of β P = 2–2.2. Then the discharges of lower β P ( β P < 2, where the value of β P is below the bifurcation threshold) and of higher β P ( β P > 2.2, where the value of β P is above the threshold) were selected for analysis. The diagnostic data provided by Thomson scattering, x-ray crystal spectrometry and charge exchange recombination spectroscopy are used to provide reliable parameter profiles and then combined with the data of external magnetic probe measurements and the polarisation interferometer diagnosis system to fully reconstruct the balance. A relevant plasma current calculation model is used to calculate and analyse the current density profiles and power deposition, and then the transport analysis is carried out. Interestingly, in the higher β P discharges, it is found that the turbulence intensity provided by the CO 2 laser collective scattering system gradually decreases and the normalised ETG R / L T e gradually increases. It is also found that the electron heat transport coefficient decreases in the discharge with higher β P and the growth rate of the electron-scale turbulence calculated by transport gyro-Landau fluid (TGLF) is significantly reduced. Meanwhile, similar conclusions are also obtained in the discharges when the β P is further increased.
Abstract In this work, we investigate the dynamics of plasma blobs in the edge of magnetic confinement devices using a full-f gyrokinetic particle-in-cell code with X-point geometry. In simulations, the evolution of a seeded blob is followed as it approaches a naturally-forming zonal shear layer near the separatrix, where the blob is stabilized by a large spin induced by the self-consistent adiabatic electron response, and blob bifurcation and trapping are observed during the cross-field propagation of blobs. A new theoretical explanation in both the zonal free and zonal shear layer is constructed, where the dominant E × B spin motion is included. A theoretical condition for a transport barrier induced by the interaction between spinning blobs and the zonal shear layer is obtained, and its scaling is verified with simulations. The new theoretical framework, especially the transport barrier, is applicable to explain and predict various experimental phenomena. In particular, the transport barrier condition calculated with experimental parameters demonstrates that the blob radial transport for H mode is smaller than L mode in experiments.
The main scientific goal of this project was to investigate the interactions between energetic electrons and magnetic islands in magnetized plasmas from lab to space. The proposed plan of addressed the following specific objectives: (1) Determine if energetic electrons are trapped by magnetic islands. Specifically, test the hypothesis that energetic electrons are trapped near island O-points due to stable orbits and de-confined near island X-points due to X-point tangles. (2) Determine how electron transport changes with island width and location. Specifically, test the hypothesis that electrons are accelerated by contracting magnetic islands through a Fermi acceleration process. (3) Assess how electron transport is affected by island dynamics, including island rotation, bifurcation, and/or island overlap. Specifically, test the hypothesis that electrons are deconfined and possibly accelerated during island rotations, bifurcations, and overlap due to stochastization of the magnetic field lines.