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NASA NTRS2019

Size and Structure of the Sequence Space of Repeat Proteins

The coding space of protein sequences is shaped by evolutionary constraints set by requirements of function and stability. We show that the coding space of a given protein family— the total number of sequences in that family—can be estimated using models of maximum entropy trained on multiple sequence alignments of naturally occurring amino acid sequences. We analyzed and calculated the size of three abundant repeat proteins families, whose members are large proteins made of many repetitions of conserved portions of *30 amino acids. While amino acid conservation at each position of the alignment explains most of the reduction of diversity relative to completely random sequences, we found that correlations between amino acid usage at different positions significantly impact that diversity. We quantified the impact of different types of correlations, functional and evolutionary, on sequence diversity. Analysis of the detailed structure of the coding space of the families revealed a rugged landscape, with many local energy minima of varying sizes with a hierarchical structure, reminiscent of frustrated energy landscapes of spin glass in physics. This clustered structure indicates a multiplicity of subtypes within each family and suggests new strategies for protein design.

Jacopo Marchi↗

DOE OSTI2026

Conservation laws and effective hadronization models

Hadronization models based on local string-breaking dynamics are typically Markovian by construction, yet the physical ensemble of final states is shaped by global constraints that couple the entire fragmentation trajectory. Recasting hadronization as a conditioned stochastic diffusion process provides a precise mathematical resolution to this tension. In particular, this language reveals explicitly that constraints stemming from conservation laws induce non-Markovian correlations between otherwise independent fragmentation steps, and that these correlations can be absorbed exactly into a renormalization of the local dynamics through a Doob $h$-transform. We develop this formalism for a $q\bar{q}$ string in the chiral limit, where the longitudinal-transverse factorization of the Lund kernel becomes exact, enabling systematic power counting and clean ultraviolet (UV)/infrared (IR) separation. The dynamics organize naturally into a tower of effective theories distinguished by the remaining string mass, spanning a UV fixed point with scale-invariant transport coefficients, an intermediate regime where transverse phase space induces controlled running, and an IR boundary layer where non-local effects enter at leading order. The tower exhibits genuine Wilsonian structure, including $β$-functions, anomalous dimensions, and systematic matching conditions. The resulting framework achieves a clean factorization of universal microscopic fragmentation dynamics from infrared constraint effects, and opens new directions for both the theoretical analysis and practical simulation of hadronization.

Menzo, Tony [Alabama U.; Fermilab] (ORCID:00000002↗

DOE OSTI2026

Cosmological constraints from a joint DESI DR1 Full-Shape and DR2 BAO

We present a cosmological analysis combining full-shape (FS) clustering measurements from the Dark Energy Spectroscopic Instrument (DESI) DR1 with baryon acoustic oscillation (BAO) measurements from DESI DR2. To achieve a robust combination that accounts for the correlation between the two data releases, we employ the ShapeFit compression method and estimate the joint covariance using EZmocks. This compressed approach inherently mitigates the prior volume effects that have previously dominated Bayesian constraints from DESI data with minimal external priors. Consequently, we obtain — for the first time within a Bayesian framework — reliable DESI-only constraints on extensions to ΛCDM using only a Big Bang Nucleosynthesis prior on the baryon density and a wide prior on the spectral index. In flat ΛCDM, we find Ω m = 0.3035 ± 0.0085, h = 0.6876 ± 0.0059, and σ 8 = 0.822 ± 0.034. For the w 0 w a CDM dynamical dark energy model, we measure w 0 = -0.49 ± 0.25 and w a = -1.52 ± 0.77, improving constraints by ∼ 30% relative to the analogous DR1 measurement and reducing the discrepancy with ΛCDM to 1.4σ when compared to BAO only analyses. We also report competitive limits on the sum of neutrino masses and spatial curvature. This work demonstrates that the ShapeFit compression provides a prior-robust and computationally efficient pathway to constrain beyond-ΛCDM physics with large-scale structure.

baryon acoustic oscillations↗

DOE OSTI2025

Constraints on neutrino physics from DESI DR2 BAO and DR1 full shape

The Dark Energy Spectroscopic Instrument (DESI) Collaboration has obtained robust measurements of baryon acoustic oscillations in the redshift range 0.1 < 𝑧 < 4.2, based on the Lyman-𝛼 forest and galaxies from data release 2. We combine these measurements with cosmic microwave background (CMB) data from Planck and the Atacama Cosmology Telescope to place our tightest constraints yet on the sum of neutrino masses. Assuming the cosmological Λ⁢ CDM model and three degenerate neutrino states, we find ∑𝑚 𝜈 < 0.0642 eV (95%) with a marginalized error of 𝜎⁡(∑𝑚 𝜈 ) = 0.020 eV. We also constrain the effective number of neutrino species, finding 𝑁 eff = 3.2⁢3$^{+0.35}_{−0.34}$ (95%), in line with the Standard Model prediction. When accounting for neutrino oscillation constraints, we find a preference for the normal mass ordering and an upper limit on the lightest neutrino mass of 𝑚 𝑙 < 0.023 eV (95%). However, we determine using frequentist and Bayesian methods that our constraints are in tension with the lower limits derived from neutrino oscillations. Correcting for the physical boundary at zero mass, we report a 95% Feldman-Cousins upper limit of ∑𝑚 𝜈 < 0.053 eV, breaching the lower limit from neutrino oscillations. Considering a more general Bayesian analysis with an effective cosmological neutrino mass parameter, ∑𝑚 𝜈,eff , that allows for negative energy densities and removes unsatisfactory prior weight effects, we derive constraints that are in 3⁢𝜎 tension with the same oscillation limit, while the error rises to 𝜎⁡(∑𝑚 𝜈,eff ) = 0.053 eV. In the absence of unknown systematics, this finding could be interpreted as a hint of new physics not necessarily related to neutrinos. The preference of DESI and CMB data for an evolving dark energy model offers one possible solution. In the 𝑤 0 ⁢𝑤 𝑎 ⁢CDM model, we find ∑𝑚 𝜈 < 0.163 eV (95%), relaxing the neutrino tension. These constraints all rely on the effects of neutrinos on the cosmic expansion history. Using full-shape power spectrum measurements of data release 1 galaxies, we place complementary constraints that rely on neutrino free streaming. Our strongest such limit in Λ ⁢CDM, using selected CMB priors, is ∑𝑚 𝜈 < 0.193 eV (95%).

79 ASTRONOMY AND ASTROPHYSICS↗

NASA NTRS2017

Rotational Spectral Unmixing of Exoplanets: Degeneracies Between Surface Colors and Geography

Unmixing the disk-integrated spectra of exoplanets provides hints about heterogeneous surfaces that we cannot directly resolve in the foreseeable future. It is particularly important for terrestrial planets with diverse surface compositions like Earth. Although previous work on unmixing the spectra of Earth from disk-integrated multi-band light curves appeared successful, we point out a mathematical degeneracy between the surface colors and their spatial distributions. Nevertheless, useful constraints on the spectral shape of individual surface types may be obtained from the premise that albedo is everywhere between 0 and 1. We demonstrate the degeneracy and the possible constraints using both mock data based on a toy model of Earth, as well as real observations of Earth. Despite the severe degeneracy, we are still able to recover an approximate albedo spectrum for an ocean. In general, we find that surfaces are easier to identify when they cover a large fraction of the planet and when their spectra approach zero or unity in certain bands.

Fujii, Yuka↗

DOE OSTI2025

A Computational Tool Compatible with NEAMS Code Packages for Optimizing the Shape of Nuclear Reactor Components and of Whole Core Performance

We designed and implemented a shape optimization tool that functions with NEAMS codes, and that nuclear scientists and engineers can employ to optimize the shape of individual components and the whole core under the applicable single- or multi-physics model comprising the employed code(s). The shape-optimization tool enables varying the geometric shape itself as well as its dimensions to yield, potentially, new component designs that are not limited by the designer’s intuition and previous experience. In cases where the optimal-shape object is an individual component, we provide the capability for additional verification that the whole-core performance using the optimized component performs better, under the prescribed optimization criteria, than the initial design. Our shape-optimization tool couples to NEAMS codes via a flexible input- composer interface and enables the user to constrain the shape’s evolution to ensure the component’s manufacturability. Finally, we demonstrate our shape-optimization tool with single- and multi-physics NEAMS codes. This objective is motivated by the recent advances in manufacturing technology that, combined with rising interest in novel reactor concepts, are creating new opportunities for innovation in the design of individual components that affect the performance of the full reactor system. In particular, Additive Manufacturing (AM) enables mass production of highly precise, intricate and complex component shapes that are not feasible with traditional manufacturing techniques. To accomplish this goal we developed and implemented in MOOSE: (1) discrete shape optimization capability based on a state-space search that uses Artificial Intelligence strategies to find the optimal state/shape; (2) smooth shape optimization tool that employs PETSc’s toolkit for advanced optimization (TAO) to optimize node-displacement of the components’ model sidesets; (3) hierarchical core optimization workflow that recognizes the repeating patterns typical in a nuclear reactor and performs the optimization one level at a time with increasing length scale. Each of these tools is equipped with user-specified constraints to avoid optimal shapes that are not manufacturable. The developed shape optimization tool is verified and demonstrated on various nuclear reactor core components and models. The optimization process accounts for tightly coupled physics that govern the behavior of these target reactors, and exercises several NEAMS codes in a coupled multiphysics fashion. The impact of the delivered shape optimization tool will materialize in the optimal design, from the outset, of advanced reactors currently contemplated to regain the US’s leadership in nuclear energy R&D. Novel reactor concepts, e.g. Molten Salt Reactors, and sizes/capacities, e.g. micro- reactors, provide a unique opportunity to optimize performance from the early stages of development, before the investment in components’ production lines, validation experiments, and licensing regimes make future improvements in performance prohibitively expensive and force sub-optimal performance on the affected reactor concept in perpetuity. This benefit will be realized by the delivered shape optimization tool regardless of the applicable manufacturing process whether traditional or AM, thereby broadening the impact of this project on current and future reactor concepts and technologies

11 - NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

NASA NTRS1993

A method to determine asteroid poles

The determination of spin axis and shape is well known to be of fundamental importance for studies about the rotational and physical properties of asteroids. In particular, knowledge that the pole coordinate distribution is random or not could indicate the probable non-Maxwellian distribution of asteroid spin axes, while the distribution in terms of size and shape could place important constraints on the theories about the collisional history of some individual asteroids, of asteroid families, and of the asteroid population as a whole. Many kinds of methods have been developed to determine pole coordinates. An EA method is presented, from which it is possible to obtain the solution with no trial poles, but with a simultaneous least square fit on both the E and A part. Results for rotational and shape parameters were obtained for 18 asteroids: the values of the obtained parameters are generally in close agreement with those of others.

Deangelis, G.↗

DOE OSTI2025

Gamma Decay of the 154 Sm Isovector Giant Dipole Resonance: Smekal-Raman Scattering as a Novel Probe of Nuclear Ground-State Deformation

𝛾 decays of the isovector giant dipole resonance (IVGDR) of the deformed nucleus 154 Sm were measured using 2$^{+}_{1}$-Smekal-Raman and elastic scattering of linearly polarized, quasimonochromatic photon beams. The two scattering processes were disentangled through their distinct angular distributions. Their branching ratio and cross sections were determined at six excitation energies covering the 154 Sm IVGDR. Both agree with the predictions of the geometrical model for the IVGDR and confirm 𝛾 decay as an observable sensitive to the structure of the resonance. Consequently, the data place strong constraints on the nuclear shape, including the degree of triaxiality. The derived 154 Sm shape parameters 𝛽 = 0.2925⁢(25) and 𝛾 = 5.0⁢(15)° agree well with other measurements and recent Monte Carlo shell-model calculations.

150 ≤ A ≤ 189↗

NASA NTRS1976

Optimization and design of three-dimensional aerodynamic configurations of arbitrary shape by a vortex lattice method

A new method based on vortex lattice theory has been developed which can be applied to the combined analysis, induced drag optimization, and aerodynamic design of three-dimensional configurations of arbitrary shape. Geometric and aerodynamic constraints can be imposed on both the optimization and the design process. The method is compared with several known analytical solutions and is applied to several different design and optimization problems, including formation flight and wingtip fins for the Boeing KC-135 tanker airplane. Good agreement has been observed between the theoretical predictions and the wind tunnel test results for the KC-135 modification.

Feifel, W. M.↗

NASA NTRS1982

Pyrolysis of Precambrian kerogens - Constraints and capabilities

Precambrian kerogens are currently considered to be the primary candidates for the search of biochemical fossils. Degradation of kerogens by relatively 'mild' pyrolysis techniques, such as under high vacuum, can liberate indicative structural moieties which were incorporated in, and perhaps shielded by, these solid and highly condensed, basically aromatic substances. It is necessary to observe analytical constraints (sample size and shape, temperature, pressure, time, etc.) in order to prevent an overabundant yield of secondary pyrolyzates (inter- and intramolecular rearrangements) which can prevent kerogen characterization. Potential biochemical fossils have been found in Precambrian kerogens. Demonstratable syngenetic biochemical fossils are expected after kerogen diagenesis and catagenesis is understood in sufficient detail, and when pyrolysis is augmented by multiple, improved analytical techniques.

Nagy, B.↗

NASA NTRS1993

A ROSAT Wide Field Camera search for XUV bursts

We have searched the ROSAT Wide Field Camera all-sky survey for shorttime-scale (less than 50 s) XUV bursts down to a limiting count of 5 x 10 exp -3 count/sq arcmin, corresponding to an incident flux of about 3 x 10 exp -10 erg/sq cm. In a total observation period of 171 d covering the entire sky, we found no evidence for such events. The present results are used to place limits on the log N-log S relation for gamma-ray bursts and constraints on the spectral shape of the previously reported ultrasoft X-ray transients.

Owens, Alan↗

NASA NTRS1994

Optimized design of a hypersonic nozzle

Conventional procedures for designing nozzles involve the design of an inviscid contour (using the method of characteristics) that is corrected with a displacement thickness calculated from boundary-layer theory. However, nozzles designed using this classical procedure have been shown to exhibit poor flow quality at Mach numbers characteristic of hypersonic applications. The nozzle to be designed will be a part of the NASA HYPULSE facility which is being used for hypervelocity flight research. Thus, the flow quality of the nozzle is a critical question that needs to be addressed. Design of nozzles for hypersonic applications requires a proper assessment of the effects of the thick boundary layer on the inviscid flowfield. Since the flow field is largely supersonic, the parabolized form of the Navier-Stokes (PNS) equations can be used. The requirement of a uniform flow at the exit plane of the nozzle can be used to define an objective function as part of an optimization procedure. The design procedure used in this study involves the coupling of a nonlinear (least-squares) optimization algorithm with an efficient, explicit PNS solver. The thick boundary layers growing on the walls of the nozzle limit the extent of the usable core region (region with uniform flow) for testing models (especially rectangular). In order to maximize the region of uniform flow, it was decided to have the exit plane of this nozzle to be (nearly) rectangular. Thus, an additional constraint on the nozzle shape resulted, namely the nozzle will have a shape transitioning from a circular one at the inlet to that of a rectangle at the exit. In order to provide for a smooth shape transition, the cross sectional contour of the nozzle is defined by a superellipse. The nozzle is taken to be a meter in length. The axial variations of the major and minor radii of the superellipse are governed by cubic splines. The design parameters are the coefficients of the splines associated with the local nozzle wall slopes. Extensive calculations have been made (with a three-dimensional Euler code) to understand the effects of various parameters such as location of the knot points of the spline function, different ways of characterizing the uniformity of the flow in the exit plane, as well as the effect of constraining the area of the nozzle to be invariant. Turbulent flow (measurements indicate that the flow at the nozzle inlet is turbulent) calculations are now being performed (with the inviscidly designed nozzle contours) to assess the flow quality.

Krishnamurthy, Ramesh↗

NASA NTRS1995

High frequency flow-structural interaction in dense subsonic fluids

Prediction of the detailed dynamic behavior in rocket propellant feed systems and engines and other such high-energy fluid systems requires precise analysis to assure structural performance. Designs sometimes require placement of bluff bodies in a flow passage. Additionally, there are flexibilities in ducts, liners, and piping systems. A design handbook and interactive data base have been developed for assessing flow/structural interactions to be used as a tool in design and development, to evaluate applicable geometries before problems develop, or to eliminate or minimize problems with existing hardware. This is a compilation of analytical/empirical data and techniques to evaluate detailed dynamic characteristics of both the fluid and structures. These techniques have direct applicability to rocket engine internal flow passages, hot gas drive systems, and vehicle propellant feed systems. Organization of the handbook is by basic geometries for estimating Strouhal numbers, added mass effects, mode shapes for various end constraints, critical onset flow conditions, and possible structural response amplitudes. Emphasis is on dense fluids and high structural loading potential for fatigue at low subsonic flow speeds where high-frequency excitations are possible. Avoidance and corrective measure illustrations are presented together with analytical curve fits for predictions compiled from a comprehensive data base.

Liu, Baw-Lin↗

NASA NTRS1994

Collisional records in LL-chondrites

One third of all the LL-chondrites have exposure ages of approx. 15 Ma and were exposed to cosmic rays following a collisional break-up. The probability that the 15-Ma peak represents a random signal is calculated to be less than 2%. Considerably lower probabilities are obtained if only LL5s or subgroups of high Ar-40 retention are used. Furthermore, we show that the peak shape agrees with statistical constraints obtained from multiple analyses of samples from the St. Severin LL6-chondrites. The frequency in and out of the 15-Ma peak varies significantly for different petrographic LL-types. The radiogenic Ar-40 retention systematics (most LL-chondrites retained Ar-40(sub rad) shows that no substantial heat pulse resulted in the 15-Ma collisional event. Interestingly, smaller exposure age clusters at approx. 28 Ma and approx. 40 Ma match up well with clusters in the histogram of L-chondrites. The distribution of LL-exposure ages is not consistent with that expected for a quasi-continuous injection of LL material into a resonance zone of the asteroid belt. The near absence of exposure ages shorter than 8 Ma either indicates a lack of recent collisional events or considerably longer transfer times than inferred from dynamical considerations.

Graf, Thomas↗

NASA NTRS2001

Trajectory Design for the Microwave Anisotropy Probe (MAP)

The Microwave Anisotropy, Probe (MAP) is a Medium Class Explorers (MIDEX) Mission produced in partnership between Goddard Space Flight Center (GSFC) and Princeton University. The goal of the MAP mission is to produce an accurate fill-sky, map of the cosmic microwave background temperature fluctuations (anisotropy). The mission orbit is a Lissajous orbit about the L(sub 2) Sun-Earth Lagrange point. The trajectory design for MAP is complex, having many requirements that must be met including shadow avoidance, sun angle constraints, Lissqjous size and shape characteristics, and limited Delta-V budget. In order to find a trajectory that met the design requirements for the entire 4-year mission lifetime goal, GSFC Flight Dynamics engineers performed many analyses, the results of which are presented herein. The paper discusses the preliminary trade-offs to establish a baseline trajectory, analysis to establish the nominal daily trajectory, and the launch window determination to widen the opportunity from instantaneous to several minutes for each launch date.

Newman, Lauri Kraft↗

NASA NTRS2008

Desert Dust Air Mass Mapping in the Western Sahara, using Particle Properties Derived from Space-based Multi-angle Imaging

Coincident observations made over the Moroccan desert during the SAhara Mineral dUst experiMent (SAMUM) 2006 field campaign are used both to validate aerosol amount and type retrieved from Multi-angle Imaging SpectroRadiometer (MISR) observations, and to place the sub-orbital aerosol measurements into the satellite's larger regional context. On three moderately dusty days for which coincident observations were made, MISR mid-visible aerosol optical thickness (AOT) agrees with field measurements point-by-point to within 0.05 to 0.1. This is about as well as can be expected given spatial sampling differences; the space-based observations capture AOT trends and variability over an extended region. The field data also validate MISR's ability to distinguish and to map aerosol air masses, from the combination of retrieved constraints on particle size, shape, and single-scattering albedo. For the three study days, the satellite observations (a) highlight regional gradients in the mix of dust and background spherical particles, (b) identify a dust plume most likely part of a density flow, and (c) show an air mass containing a higher proportion of small, spherical particles than the surroundings, that appears to be aerosol pollution transported from several thousand kilometers away.

Kahn, Ralph↗

NASA NTRS2010

NASA's Evolution to K(sub a)- Band Space Communications for Near-Earth Spacecraft

Over the next several years, NASA plans to launch multiple earth-science missions which will send data from low-Earth orbits to ground stations at 1-3 Gbps, to achieve data throughputs of 5-40 terabits per day. These transmission rates exceed the capabilities of S-band and X-band frequency allocations used for science probe downlinks in the past. Accordingly, NASA is exploring enhancements to its space communication capabilities to provide the Agency's first Ka-band architecture solution for next generation missions in the near-earth regime. This paper describes the proposed Ka-band solution's drivers and concept, constraints and analyses which shaped that concept, and expansibility for future needs

McCarthy, Kevin P.↗

NASA NTRS2008

Desert Dust Aerosol Air Mass Mapping in the Western Sahara, Using Particle Properties Derived from Space-Based Multi-Angle Imaging

Coincident observations made over the Moroccan desert during the Sahara mineral dust experiment (SAMUM) 2006 field campaign are used both to validate aerosol amount and type retrieved from multi-angle imaging spectroradiometer (MISR) observations, and to place the suborbital aerosol measurements into the satellite s larger regional context. On three moderately dusty days during which coincident observations were made, MISR mid-visible aerosol optical thickness (AOT) agrees with field measurements point-by-point to within 0.05 0.1. This is about as well as can be expected given spatial sampling differences; the space-based observations capture AOT trends and variability over an extended region. The field data also validate MISR s ability to distinguish and to map aerosol air masses, from the combination of retrieved constraints on particle size, shape and single-scattering albedo. For the three study days, the satellite observations (1) highlight regional gradients in the mix of dust and background spherical particles, (2) identify a dust plume most likely part of a density flow and (3) show an aerosol air mass containing a higher proportion of small, spherical particles than the surroundings, that appears to be aerosol pollution transported from several thousand kilometres away.

Kahn, Ralph↗