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At least 703 records · Page 39

Multi‐season analysis reveals hundreds of drought‐responsive genes in sorghum

Persistent drought affects global crop production and is becoming more severe in many parts of the world in recent decades. Deciphering how plants respond to drought will facilitate the development of flexible mitigation strategies. Sorghum bicolor L. Moench (sorghum), a major cereal crop and an emerging bioenergy crop, exhibits remarkable resilience to drought. To better understand the molecular traits that underlie sorghum's remarkable drought tolerance, we undertook a large-scale sorghum gene expression profiling effort, totaling nearly 1500 transcriptome profiles, across a 3-year field study with replicated plots in California's Central Valley. This study included time-resolved gene expression data from roots and leaves of two sorghum genotypes, BTx642 and RTx430, with different pre-flowering and post-flowering drought-tolerance adaptations under control and drought conditions. Quantification of genotype-specific drought tolerance effects was enabled by de novo sequencing, assembly, and annotation of both BTx642 and RTx430 genomes. These reference-quality genomes were used to construct a pangene set for characterizing conserved and genotype-specific expression. By integrating time-resolved transcriptomic responses to drought in the field across three consecutive years, we identified a set of 726 drought-responsive genes that responded similarly in all 3 years of our field study. Functional enrichment analysis identified abiotic stress, secondary cell wall-related processes and metabolism as particularly affected under both types of drought stress. We also found that some glyoxylate cycle pathway genes, including malate synthase and isocitrate lyase, are differentially regulated particularly during post-flowering drought stress, implicating this pathway as potentially important for drought responsiveness. This expansive dataset represents a unique resource for sorghum and drought research communities and provides a methodological framework for the integration of multi-faceted time-resolved transcriptomic datasets.

Cole, Benjamin [USDOE Joint Genome Institute (JGI)↗

BioSiting Tool (BioSiting) v2

The BioSiting Tool provides a geospatial interface for analyzing bioeconomy resources and infrastructure across the continental U.S. The tool integrates empirical and modeled data from a broad range of sources. Bioeconomy resources mapped in the tool include agricultural residues, forest residues, municipal solid waste streams, food waste, manure, fats, oils and greases and potential yields of energy crops. Infrastructure mapped in the tool includes biorefineries, material recovery facilities, anaerobic digesters, wastewater treatment plants, combustion plants, district energy systems, crude oil pipelines, petroleum pipelines, natural gas pipelines, railways and freight terminals. Additional data layers include environmental justice indicators at the census tract level and carbon dioxide geologic storage potential. Users can select a location on the map, define a buffer radius in kilometers and generate an inventory of all bioecomony resources within the buffer zone. Data from the tool can be downloaded from individual buffer zones, or at the state or national level.

Huntington, Tyler↗

Climate smart agriculture and global food-crop production

Most business-as-usual scenarios for farming under changing climate regimes project that the agriculture sector will be significantly impacted from increased temperatures and shifting precipitation patterns. Perhaps ironically, agricultural production contributes substantially to the problem with yearly greenhouse gas (GHG) emissions of about 11% of total anthropogenic GHG emissions, not including land use change. It is partly because of this tension that Climate Smart Agriculture (CSA) has attracted interest given its promise to increase agricultural productivity under a changing climate while reducing emissions. Considerable resources have been mobilized to promote CSA globally even though the potential effects of its widespread adoption have not yet been studied. Here we show that a subset of agronomic practices that are often included under the rubric of CSA can contribute to increasing agricultural production under unfavorable climate regimes while contributing to the reduction of GHG. However, for CSA to make a significant impact important investments and coordination are required and its principles must be implemented widely across the entire sector.

54 ENVIRONMENTAL SCIENCES↗

NNSA/CEA Workflow (Workshop Report)

This report, prepared by the NNSA/CEA Workflows Working Group, briefly summarizes the presentations in the areas of domain specific workflows, end user environments, data management, job and resource management, and infrastructure, and then identifies six broad areas for potential collaboration. A key finding is that users could benefit from greater interoperability, compatibility, and composability of the workflow technologies under development and that point-to-point collaboration opportunities should be identified to explore these aspects.

96 KNOWLEDGE MANAGEMENT AND PRESERVATION↗

NNSA/CEA Workflow Workshop Report 2021

Researchers from three NNSA labs plus CEA recently met for a half-day workshop on scientific and engineering workflows in March of 2021. Tools, projects and use cases from each institution were described. A wide range of unique capabilities and requirements were represented. The workshop highlights the fact that the CEA/NNSA workflows space mirrors the broader open science workflows community, with multiple technologies under development in a number of science domains and under a number of funding streams, with differing capabilities and focuses. Despite the number of tools, presentations and discussions have shown that these tools cover specific mission spaces at the four labs, each with distinctive capabilities that do not completely overlap with each other. We believe there is a strong interest in the short term for sharing lessons learned and collaborating on benchmarks and site evaluation of projects. This report, prepared by the NNSA/CEA Workflows Working Group, briefly summarizes the presentations in the areas of domain specific workflows, end user environments, data management, job and resource management, and infrastructure, and then identifies six broad areas for potential collaboration. A key finding is that users could benefit from greater interoperability, compatibility, and composability of the workflow technologies under development and that point-to-point collaboration opportunities should be identified to explore these aspects.

97 MATHEMATICS AND COMPUTING↗

Basic Research Needs in Quantum Computing and Networking

Employing quantum mechanical resources in computing, information processing, and networking opens the door to potential exponential advantages over classical counterparts. However, quantifying and realizing such advantages poses extensive scientific and engineering challenges. Department of Energy (DOE) investments have driven steady progress in addressing such challenges. Recently developed quantum algorithms offer asymptotic exponential advantages in speed or accuracy for fundamental scientific problems. These problems include simulating physical systems, solving systems of linear equations, differential equations, and optimization problems. Empirical demonstrations on nascent quantum hardware suggest better performance on contrived computational tasks than classical analogs. However, the requirements for a quantum computer or network to demonstrate an end-to-end rigorously quantifiable performance improvement over classical analogs remains a grand challenge, especially for problems of practical value. In particular, what will be required for quantum technology to ultimately exhibit scalable, rigorous, and transformative performance advantages for practical applications? In July 2023, DOE’s Advanced Scientific Computing Research program in the Office of Science convened the Workshop on Basic Research Needs in Quantum Computing and Networking, where major opportunities and grand challenges were identified. The following five priority research directions (PRDs) were identified as a result of the workshop.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Los Angeles Air Force Base Vehicle-to-Grid Demonstration (Final Project Report)

Electrification of non-tactical vehicle fleets represents a key efficiency and energy security objective for the United States Department of Defense. To achieve electrification, the department targeted vehicle-to-grid services as a way to decrease the overall cost of operating the vehicle fleet and achieve rough parity with traditional internal combustion engine vehicle fleets. This report describes efforts to aggregate a fleet of bi-directional electric vehicles and charging stations to provide regulation up and regulation down in the California Independent System Operator ancillary services market. A 29-vehicle electric vehicle demonstration fleet, consisting of mixed purpose and duty vehicles such as sedans, pickups, vans, and medium-duty trucks, was deployed at the Los Angeles Air Force base. The fleet provided frequency regulation to the California Independent System Operator’s wholesale electricity market to determine the capability of recouping some of the additional costs of procuring electric vehicles and their supporting infrastructure. Lawrence Berkeley National Laboratory, with its partner Kisensum, LLC, developed the fleet scheduling, optimization, and control software to allow the vehicle fleet at the air force base to participate in the ancillary services markets. This report focuses on the control software and market interactions, the significant challenges faced and solutions devised to address them, and examines the potential of using the electric vehicle fleet as an energy storage resource for the base buildings, an application known as vehicle-tobuilding, in providing demand response and emergency backup power. The report discusses key findings related to providing frequency regulation to the California Independent System Operator market, electric vehicle fleet performance, compatibility of varying resource parameters of vehicle fleet aggregation, the need for automated methods for communicating hour-ahead energy bidding, challenges related to battery capacity and charge/discharge rates, and monthly settlement revenue.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Supply Chain Management in Cyber Grid Guard Framework

Grid modernization has impeded innovative power grid applications and energy resources that are increasingly distributed. Blockchain/distributed ledger technology (DLT) has the potential to enhance the resilience of the electric infrastructure, particularly in a decentralized and distributed environment. The benefits of blockchain are to ensure asset information and lifecycle events are secure and traceable and identify potential malicious modification of data. Oak Ridge National Laboratory (ORNL) has developed a framework, Cyber Grid Guard (CGG), incorporating blockchain. The system implements a low-energy, fast, and robust enhancement to system trustworthiness within and across electric grid systems, including substations, control centers, and metering infrastructures. Currently, one of the major concerns is supply chain attacks. There have been several recent attacks that have significantly impacted critical infrastructures and organizations around the world. This document focuses on how CGG can be used to address the supply chain issue.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Generative AI for Power Grid Operations

Generative artificial intelligence (AI) has captured into the mainstream, demonstrating capabilities that once belonged solely to the realm of human cognition. From defeating world champions in complex games to generating human-quality text and images, Generative AI has proven its potential to revolutionize countless industries. The electric power grid is no exception. Generative AI's ability to process vast amounts of data rapidly, assist decision support and identify patterns could significantly enhance power grid operations. For example, Generative AI could improve state estimation where measurements are not available or integrate renewable energy sources more efficiently with probabilistic forecasting. The key contributions of this whitepaper are outlined below: (1) Comprehensive overview of Generative AI's applications in power grid operations: It highlights the opportunities in areas such as forecasting, state estimation, and demonstrating the potential for enhancing efficiency, reliability, and resilience. (2) Expanding Generative AI's impact through synergies with emerging technologies: The paper introduce NREL developed eGridGPT and explores how AI orchestration, multi-agent systems, and Digital Twins can collaborate to optimize grid operations, addressing the complexities of a decarbonized and electrified future. (3) In-depth analysis of challenges in implementing Generative AI: This includes considerations like data availability and quality, model validation, certification, and ethical concerns, ensuring responsible AI deployment. (4) Emphasizing human-AI collaboration: The whitepaper underscores the importance of trustworthy, transparency, and explainability in AI systems to promote seamless interaction between human operators and AI, ultimately improving decision-making. (5) Exploring future research and development: It identifies critical areas for further advancement to fully realize Generative AI's potential in power grid operations. This whitepaper serves as a valuable resource for researchers, practitioners, and policymakers looking to harness Generative AI for a more reliable, stable, and cost-effective power grid.

24 POWER TRANSMISSION AND DISTRIBUTION↗

A Systematic Review and Integrated Approach to Modeling of Aging Utility Scale PV Systems

The growing deployment of utility-scale photovoltaic (PV) systems has increased the importance of techno-economic modeling operational photovoltaic (PV) systems for predicting energy yield, optimizing asset management, and informing financial decisions. Through a systematic review of literature and current industry practices, we review the different common modeling practices of a system's configuration and age, performance and degradation, operation and maintenance (O&M), while also focusing on specific considerations for repowering, revamping, and decommissioning. Building on the synthesis, we develop a structured framework for techno-economic modeling of operating PV systems that integrate performance and degradation analysis, a decommissioning and repowering cost model that estimates the system's end-of-life costs to reduce uncertainty quantifications and improve consistency across the sector. This research contributes to improved modeling methodologies and potentially to reduced financial performance requirements by providing practitioners with input resources and practical approaches to estimate performance, degradation, and costs associated with continued operation, revamping, repowering, or decommissioning decisions.

14 SOLAR ENERGY↗

Ecological Trait-Based Digital Categorization of Microbial Genomes for Denitrification Potential

Microorganisms encode proteins that function in the transformations of useful and harmful nitrogenous compounds in the global nitrogen cycle. The major transformations in the nitrogen cycle are nitrogen fixation, nitrification, denitrification, anaerobic ammonium oxidation, and ammonification. The focus of this report is the complex biogeochemical process of denitrification, which, in the complete form, consists of a series of four enzyme-catalyzed reduction reactions that transforms nitrate to nitrogen gas. Denitrification is a microbial strain-level ecological trait (characteristic), and denitrification potential (functional performance) can be inferred from trait rules that rely on the presence or absence of genes for denitrifying enzymes in microbial genomes. Despite the global significance of denitrification and associated large-scale genomic and scholarly data sources, there is lack of datasets and interactive computational tools for investigating microbial genomes according to denitrification trait rules. Therefore, our goal is to categorize archaeal and bacterial genomes by denitrification potential based on denitrification traits defined by rules of enzyme involvement in the denitrification reduction steps. We report the integration of datasets on genome, taxonomic lineage, ecosystem, and denitrifying enzymes to provide data investigations context for the denitrification potential of microbial strains. We constructed an ecosystem and taxonomic annotated denitrification potential dataset of 62,624 microbial genomes (866 archaea and 61,758 bacteria) that encode at least one of the twelve denitrifying enzymes in the four-step canonical denitrification pathway. Our four-digit binary-coding scheme categorized the microbial genomes to one of sixteen denitrification traits including complete denitrification traits assigned to 3280 genomes from 260 bacteria genera. The bacterial strains with complete denitrification potential pattern included Arcobacteraceae strains isolated or detected in diverse ecosystems including aquatic, human, plant, and Mollusca (shellfish). The dataset on microbial denitrification potential and associated interactive data investigations tools can serve as research resources for understanding the biochemical, molecular, and physiological aspects of microbial denitrification, among others. The microbial denitrification data resources produced in our research can also be useful for identifying microbial strains for synthetic denitrifying communities.

59 BASIC BIOLOGICAL SCIENCES↗

Effects of Production of Woody Pellets in the Southeastern United States on the Sustainable Development Goals

Wood-based pellets are produced in the southeastern United States (SE US) and shipped to Europe for the generation of heat and power. Effects of pellet production on selected Sustainability Development Goals (SDGs) are evaluated using industry information, available energy consumption data, and published research findings. Challenges associated with identifying relevant SDG goals and targets for this particular bioenergy supply chain and potential deleterious impacts are also discussed. We find that production of woody pellets in the SE US and shipments to displace coal for energy in Europe generate positive effects on affordable and clean energy (SDG 7), decent work and economic growth (SDG 8), industry innovation and infrastructure (SDG 9), responsible consumption and production (SDG 12), and life on land (SDG 15). Primary strengths of the pellet supply chain in the SE US are the provisioning of employment in depressed rural areas and the displacement of fossil fuels. Weaknesses are associated with potential impacts on air, water, and biodiversity that arise if the resource base and harvest activities are improperly managed. The SE US pellet supply chain provides an opportunity for transition to low-carbon industries and innovations while incentivizing better resource management.

09 BIOMASS FUELS↗

Beyond Leakage: Non-Revenue Water Loss and Economic Sustainability

Water loss in urban supply systems poses significant challenges for water utility companies worldwide, affecting both sustainable access to clean water and the financial viability of utility operations. This study analyzes the evolution of water losses in high-level supply systems from 2017 to 2021 in Portugal, focusing on its implications for the profitability of water utility companies across NUTs II regions. Drawing on data from various sources, including the National Information System for Water Resources, PORDATA, ERSAR, and ORBIS, this analysis identifies trends, patterns, and potential factors influencing water loss dynamics. Key components of the analysis include calculating average annual losses, examining unbilled water percentages, and conducting regression analysis to quantify the impact of water loss on profit margins. The findings contribute to the literature on water loss management and financial performance in the water utility sector, offering insights for policymakers, water utility managers, and stakeholders to enhance financial sustainability and reduce water losses.

Santos, Eleonora (ORCID:0000000346930804)↗

Wabash CarbonSAFE Subtask 4.1 - Application of Policy Frameworks for Improved Carbon Capture and Storage Social Site Characterization & Stakeholder Engagement

Anthropogenic climate change threatens environmental and human health globally. Limiting these threats requires large-scale and innovative greenhouse gas mitigation responses across carbon-intensive energy and industrial sectors. Carbon capture and storage (CCS) technologies present potential opportunities for mitigating climate change while maintaining a diverse energy resource portfolio. Successful development of CCS physical sites requires effective and efficient project management solutions that elicit and incorporate the concerns and perspectives of diverse stakeholders. Due to the urgency of climate change mitigation technology implementation and the costs of CCS development, CCS project developers cannot risk setbacks by poor stakeholder assessment that concern management processes. Thus, this report presents four prominent policy frameworks and associated case studies as opportunities to improve CCS social site characterization and stakeholder engagement. After comparing the relative effectiveness and efficiencies of each framework with regard to CCS, this report concludes that the Advocacy Coalition Framework, Narrative Policy Framework, and Policy Conflict Framework can improve the CCS social site characterization process, while the Collaborative Governance Framework paired with the Q-Methodology provides an ideal framework for direct stakeholder engagement. Overall, this report finds that the Narrative Policy Framework and the Collaborative Governance Framework are most ideally suited for the purposes of CCS social site characterization and stakeholder engagement.

01 COAL, LIGNITE, AND PEAT↗

Open-Source Contributions to Arbiter2

Login nodes at High-Performance Computing (HPC) sites are shared resources used by a multitude of users to compile, test and submit jobs to the batch system. Because these nodes are shared by multiple users at any time, if a minority of users are using a significant proportion of the resources of the node (CPU, memory, etc.), other users' tasks may be negatively impacted. Arbiter2 is an open-source project developed by the University of Utah that aims to prevent these occurrences by dynamically limiting the resources of users depending on whether they are excessively using resources. INL has sought to adapt and develop Arbiter2 for a potential deployment at INL and plans on upstreaming the changes and improvements so that other HPC sites running Arbiter2 can benefit from their work.

97 MATHEMATICS AND COMPUTING↗

Improving the Cyber Resiliency and Security Posture of Public Power (Final Report)

The key objective of Improving the Cyber Resiliency and Security Posture of Public Power (Project) was to develop a culture of cyber resiliency and security within the public power community. The relative smaller size and unique structure of community-owned electric utilities can sometimes present challenges in immediate recognition of threats and the escalation of potential incidents. The Project offered targeted education, coordination, capability building, and resources to help the public power community better understand, install, and implement cyber and physical resiliency and security systems. The American Public Power Association (APPA) accelerated efforts to develop resources for and with the public power community to understand and implement resiliency, cybersecurity and cyber-physical solutions, including refining and improving the adoption of advanced control concepts. The Project consisted of four major multi-pronged tasks which included: 1) Advance cyber resiliency and security assessments; 2) Conduct, evaluate, and use the results of onsite vulnerability assessments; 3) Research, evaluate, deploy, and integrate both commercial and pre-commercial security technologies; and 4) Research, evaluate, and implement information sharing mechanisms.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Leaky Buddies: Cross-Component Covert Channels on Integrated CPU-GPU Systems

Graphics Processing Units (GPUs) are ubiquitous components used across the range of today’s computing plat- forms, from phones and tablets, through personal computers, to high-end server class platforms. With the increasing importance of graphics and video workloads, recent processors are shipped with GPU devices that are integrated on the same chip. Integrated GPUs share some resources with the CPU and as a result, there is a potential for microarchitectural attacks from the GPU to the CPU or vice versa. We consider the potential for covert channel attacks that arise either from shared microarchitectural components (such as caches) or through shared contention domains (e.g., shared buses). We illustrate these two types of channels by developing two reliable covert channel attacks. The first covert channel uses the shared LLC cache in Intel’s integrated GPU architectures. The second is a contention based channel targeting the ring bus connecting the CPU and GPU to the LLC. This is the first demonstrated microarchitectural attack crossing the component boundary (GPU to CPU or vice versa). Cross-component channels introduce a number of new challenges that we had to overcome since they occur across heterogeneous components that use different computation models and are interconnected using asymmetric memory hierarchies. We also exploit GPU parallelism to increase the bandwidth of the communication, even without relying on a common clock. The LLC based channel achieves a bandwidth of 120 kbps with a low error rate of 2%, while the contention based channel delivers up to 400 kbps with a 0.8% error rate. We also demonstrate a proof- of-concept prime-and-probe side channel attack that probes the full LLC from the GPU.

Cyber secruity, high performance comptuing, Hetero↗

Evaluating Future US Hydropower Opportunities

Uncertainties, and a lack of confidence regarding issues, such as water availability/storage capacities and operational constraints, can be major obstacles in assessing the range of future opportunities for existing dams, which are certainly substantial. The authors discuss specific challenges facing current infrastructure and water resource data analysis that can inhibit large-scale evaluation of potential hydro development at existing dams. Recent advances in data and tools that may address these challenges are introduced.

13 HYDRO ENERGY↗