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At least 703 records · Page 39

“Interpenetration Isomerism” of Triptycene-Based Hydrogen-Bonded Organic Frameworks

In this work, we describe an example of “interpenetration isomerism” in three-dimensional (3D) hydrogen-bonded organic frameworks (HOFs). By exploiting the crystallization conditions for a peripherally extended triptycene H6PET, we can modulate the interpenetration of the assembled frameworks, yielding a two-fold interpenetrated structure PETHOF-1 (acs-2c topology) and a five-fold interpenetrated structure PETHOF-2 (acs-5c topology) as “interpenetration isomers”. In PETHOF-1, two individual nets are related by inversion symmetry and form an interwoven topology with a strikingly large guest-accessible volume of about 80%. In PETHOF-2, five individual nets are related by translational symmetry and are stacked in an alternating fashion. Additionally, the activated materials show permanent porosity with high Brunauer–Emmett–Teller (BET) areas exceeding 1100 m2•g-1. Finally, we believe that synthetic control over the framework interpenetration can serve as a new design strategy to construct diverse and complex supramolecular architectures from simple organic building blocks.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

In Situ Synthesized Homochiral Spiroborate Ester Metal–Organic Framework with Mono–, Di–, and Trivalent Cations

Here we report here a one–step method for synthesizing multi–component and in–situ–formed homochiral spiroborate–ester–based metal–organic framework CPM–B1. This unique material successfully integrates COF fragment spiroborate ester within the MOF and simultaneously incorporate homochirality and helicity. In addition, CPM–B1 is a rare example of framework materials that results from the cooperative assembly of three charge–complementary cations: +1 (lithium), +2 (cobalt), and +3 (boron). The sophistication of the co–assembly is further highlighted by the three structural roles of lithium ions. This unique structure contributes to its multi–functional properties such as ionic conductivity and catalytic activity for oxygen reduction reaction (by CPM–B1 carbonized material) and provides a new path to develop MOF materials with complex secondary building units and multi–functional applications.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Competitive Energy and Electron Transfer in β-Functionalized Free-Base Porphyrin-Zinc Porphyrin Dimer Axially Coordinated to C 60 : Synthesis, Supramolecular Formation and Excited-State Processes

Simultaneous occurrence of energy and electron transfer events involving different acceptor sites in a newly assembled supramolecular triad comprised of covalently linked free-base porphyrin–zinc porphyrin dyad, H 2 P-ZnP axially coordinated to electron acceptor fullerene, has been successfully demonstrated. The dyad was connected through the β-pyrrole positions of the porphyrin macrocycle instead of the traditionally used meso-positions for better electronic communication. Interestingly, the β-pyrrole functionalization modulated the optical properties to such an extent that it was possible to almost exclusively excite the zinc porphyrin entity in the supramolecular triad. The measured binding constant for the complex with 1:1 molecular stoichiometry was in the order of 10 4 m -1 revealing moderately stable complex formation. An energy level diagram constructed using optical, electrochemical and computational results suggested that both the anticipated energy and electron events are thermodynamically feasible in the triad. Consequently, it was possible to demonstrate occurrence of excited state energy transfer to the covalently linked H 2 P, and electron transfer to the coordinated ImC 60 from studies involving steady-state and time-resolved emission, and femto- and nanosecond transient absorption studies. The estimated energy transfer was around 67 % in the dyad with a rate constant of 1.1×10 9 s -1 . In the supramolecular triad, the charge separated state was rather long-lived although it was difficult to arrive the exact lifetime of charge separated state from nanosecond transient spectral studies due to overlap of strong triplet excited signals of porphyrin in the monitoring wavelength window. Nevertheless, simultaneous occurrence of energy and electron transfer in the appropriately positioned energy and electron acceptor entities in a supramolecular triad was possible to demonstrate in the present study, a step forward to unraveling the complex photochemical events occurring in natural photosynthesis and its implications in building light energy harvesting devices.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Effects of water on the kinetics of acetone hydrogenation over Pt and Ru catalysts

We employed an approach combining reaction kinetics measurements at steady state conditions, electronic structure calculations employing density functional theory, and microkinetic modeling for acetone hydrogenation to provide insights into the effects of water on metal catalyst surfaces for the hydrogenation of oxygenates over a wide range of reaction conditions. Elucidation of the repulsive interactions due to adsorbed water molecules at various reaction conditions provides a basis to formulate rate expressions for heterogeneous catalytic processes of biomass oxygenates. Reaction kinetics experiments were carried out at partial pressures of H 2 , acetone, water and helium in the range of 0.51-0.79, 0.02-0.13, 0.08-0.23, 0-0.28 atm, respectively. We show that the addition of water enhances the hydrogenation rate at 353 K and 1 atm on oxophilic metal catalysts such as Ru/C, whereas the same promotional effect of water is not observed for Pt-based catalysts. Microkinetic model predictions for the hydrogenation of acetone on Ru in the absence and presence of water, using enthalpies and entropies obtained from DFT calculations, were in agreement with the experimentally observed reaction orders and activation barriers. The model shows that a water-assisted hydroxypropyl path is expected to be the favored path on Ru with a rate-determining step of H-OH-mediated hydrogenation of C 3 H 6 OH (i.e., the hydroxypropyl intermediate formed by H 2 O-mediated initial hydrogenation of acetone) to produce isopropyl alcohol (IPA). Furthermore, hydrogen, acetone, hydroxypropyl intermediate and hydroxyl species were predicted to be abundant on the Ru surface with a high coverage of nearly 85%. Lastly, the combined studies of computational and experimental catalysis on hydrogenation reactions help to elucidate the mechanistic role of water on metal catalyzed reactions for producing chemical building blocks from biomass-derived oxygenates.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Leveraging visible and near-infrared spectroelectrochemistry to calibrate a robust model for Vanadium(IV/V) in varying nitric acid and temperature levels

Spectroelectrochemistry and optimal design of experiments can be used to rapidly build accurate models for species quantification and enable a greater level of process awareness. Optical spectroscopy can provide vital elemental and molecular information, but several hurdles must be overcome before it can become a widely adopted analytical method for remote analysis in the nuclear field. Analytes with varying oxidation state, acid concentration, and fluctuating temperature must be efficiently accounted for to minimize time and resources in restrictive hot cell environments. The classic one-factor-at-a-time approach is not suitable for frequent calibration/maintenance operations in this setting. Therefore, a novel alternative was developed to characterize a system containing vanadium(IV/V) (0.01–0.1 M), nitric acid (0.1–4 M), and varying temperatures (20–45 °C). Here, spectroelectrochemistry methods were used to acquire a sample set selected by optimal design of experiments. This new approach allows for the accurate analysis of vanadium and HNO 3 concentration by leveraging UV–Vis–NIR absorption spectroscopy with robust and accurate chemometric models. The top model's root mean squared error of prediction percent values were 3.47%, 4.06%, 3.40%, and 10.9% for V(IV), V(V), HNO 3 , and temperature, respectively. These models, efficiently developed using the designed approach, exhibited strong predictive accuracy for vanadium and acid with varying oxidation states and temperature using only spectrophotometry, which advances current technology for real-world hot cell applications. Additionally, Nernstian analysis of the V(IV/V) standard potential was performed using traditional absorbance methods and multivariate curve resolution (MCR). The successful tests demonstrated that MCR Nernst tests may be valuable in highly convoluted spectral systems to better understand the redox processes' behavior.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Development and Evaluation of Occupancy-Aware Model Predictive Control for Residential Building Energy Efficiency and Occupant Comfort

The residential sector accounts for 25% of global primary energy consumption. Two methods have previously been proposed to reduce residential energy use associated with the provision of occupant thermal comfort: 1. Occupancy-based HVAC control, operating systems only during confirmed occupancy, and 2. model predictive control (MPC), harnessing a mathematical model and forecasts to find optimal operating strategies. Previous studies estimate the average energy savings of the two methods individually in the range of 21% and 16%, respectively. The research presented herein was carried out to evaluate the energy savings potential in residential buildings by combining both approaches across different climates, house vintages, and occupancy patterns. Occupancy and eight different physical modalities (e.g. CO2 and VOC) data were collected from five homes for time periods of 4–9 weeks. Collected data sets were used to train occupancy prediction models suggested by an extensive literature survey of occupancy model types. The trained prediction models were combined with MPC and detailed EnergyPlus building simulation models to evaluate residential building performance in terms of annual energy savings and thermal comfort, along with discomfort exceedance metrics. Multiple home types and regions were analyzed to understand regional and climate-dependent potential. Based on actual field data, the occupancy models had a prediction inaccuracy between 8% and 35% across the investigated homes. Average occupancy for the collected data ranged from 56% to 86%, a typical range reported in the literature. Building simulations were conducted for three control scenarios: conventional thermostatic control, occupancy-based, and occupancy-based MPC. The results indicate that all advanced strategies improve upon the conventional control, with some scenarios cutting energy use in half with only occasional incurrence of discomfort. The findings indicate that occupancy-aware model predictive residential building control has the potential to drastically reduce energy use and associated emissions while maintaining occupant comfort for both new and existing buildings.

ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATION↗

Extraction of CP Properties of the H(125) Boson Discovered in Proton-Proton Collisions at√s = 7 and 8 TeV with the CMS Detector at the LHC

In this thesis we build a novel analysis framework to perform the direct extraction ofall possible effective Higgs boson couplings to the neutral electroweak gauge bosonsin the H → ZZ (*) → 4 channel also referred to as the golden channel. We use analytic expressions of the full decay differential cross sections for the H → V V → 4process, and the dominant irreducible standard model q q → 4 background where¯4 = 2e2µ, 4e, 4µ. Detector effects are included through an explicit convolution ofthese analytic expressions with transfer functions that model the detector responsesas well as acceptance and efficiency effects. Using the full set of decay observables, weconstruct an unbinned 8-dimensional detector level likelihood function which is continuous in the effective couplings, and includes systematics. All potential anomalouscouplings of HV V where V = Z, γ are considered, allowing for general CP even/oddadmixtures and any possible phases. We measure the CP -odd mixing between thetree-level HZZ coupling and higher order CP -odd couplings to be compatible withzero, and in the range [-0.40, 0.43], and the mixing between HZZ tree-level couplingand higher order CP -even coupling to be in the ranges [-0.66, -0.57] U [-0.15, 1.00];namely compatible with a standard model Higgs. We discuss the expected precisionin determining the various HV V couplings in future LHC runs. A powerful and at first glance surprising prediction of the analysis is that with 100-400 fb -1 , the goldenchannel will be able to start probing the couplings of the Higgs boson to diphotons inthe 4 channel. We discuss the implications and further optimization of the methodsfor the next LHC runs.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Final Technical Report DE-FG02-02ER45999

Over the course of this period of funding, the PI published 62 papers and graduated 15 Ph.D. students supported by the grant. In addition 17 undergraduate students, 10 postdocs and 16 Visiting Scholars were also involved in this research. Over 150 talks at national and international conferences on the topic were given by the PI and her research group. Research topics included the following: geometrical and electronic control of anisotropy in mononuclear complexes, incorporation of titanium ions into magnetic materials, trans-dicyanide building blocks for chains, cyanometallate chemistry of highly anisotropic metal ions, and compounds with dianionic organocyanide ligands.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Electrically Driven Ion Separations in Permeable Membranes

Membranes are attractive for a wide range of separations due to their low energy costs and continuous operation. To achieve practical fluxes, most membranes consist of a thin, selective skin on a highly permeable substrate that provides mechanical strength. Thus, this project focused on creating new methods for forming highly selective ultrathin skins as well as modeling transport through these coatings to better understand their unprecedented selectivities. The research explored both gas and ion separations, and the latter included transport due to concentration, pressure and electrical potential gradients. This report describes a series of highlights of the research and then provides a complete list of publications supported by the grant. These publications have been cited more than 4000 times. Perhaps the most stunning finding is the recent discovery of monovalent/divalent cation and anion selectivities around 1000 when modifying cation- and anion-exchange membranes with polyelectrolyte multilayers (PEMs). This discovery builds on many years of exciting research. (Citation numbers refer to the journal articles in the bibliography.)

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

New approaches for metabolomics by mass spectrometry

Small molecules constitute a large part of the world around us, including fossil and some renewable energy sources. Solar energy harvested by plants and bacteria is converted into energy rich small molecules on a massive scale. Some of the worst contaminants of the environment and compounds of interest for national security also fall in the category of small molecules. The development of large scale metabolomic analysis methods lags behind the state of the art established for genomics and proteomics. This is commonly attributed to the diversity of molecular classes included in a metabolome. Unlike nucleic acids and proteins, metabolites do not have standard building blocks, and, as a result, their molecular properties exhibit a wide spectrum. This impedes the development of dedicated separation and spectroscopic methods. Mass spectrometry (MS) is a strong contender in the quest for a quantitative analytical tool with extensive metabolite coverage. Although various MS-based techniques are emerging for metabolomics, many of these approaches include extensive sample preparation that make large scale studies resource intensive and slow. New ionization methods are redefining the range of analytical problems that can be solved using MS. This project developed new approaches for the direct analysis of small molecules in unprocessed samples, as well as pushed the limits of ultratrace analysis in volume limited complex samples. The projects resulted in techniques that enabled metabolomics investigations with enhanced molecular coverage, as well as the study of cellular response to stimuli on a single cell level. Effectively individual cells became reaction vessels, where we followed the response of a complex biological system to external perturbation. We established two new analytical platforms for the direct study of metabolic changes in cells and tissues following external perturbation. For this purpose we developed a novel technique, laser ablation electrospray ionization (LAESI), for metabolite profiling of functioning cells and tissues. The technique was based on microscopic sampling of biological specimens by mid-infrared laser ablation followed by electrospray ionization of the plume and MS analysis. The two main shortcomings of this technique had been limited specificity due to the lack of a separation step, and limited molecular coverage, especially for nonpolar chemical species. To improve specificity and the coverage of the metabolome, we implemented the LAESI ion source on a mass spectrometer with ion mobility separation (IMS). In this system, the gas phase ions produced by the LAESI source were first sorted according to their collisional cross sections in a mobility cell. These separated ion packets were then subjected to MS analysis. By combining the atmospheric pressure ionization with IMS, we improved the metabolite coverage. Further enhancement of the non-polar metabolite coverage resulted from the combination of laser ablation with vacuum UV irradiation of the ablation plume. Our results indicated that this new ionization modality provided improved detection for neutral and non-polar compounds. Based on rapid progress in photonics, we had introduced another novel ion source that utilized the interaction of a laser pulse with silicon nanopost arrays (NAPA). In these nanophotonic ion sources, the structural features were commensurate with the wavelength of the laser light. The enhanced interaction resulted in high ion yields. This ultrasensitive analytical platform enabled the MS analysis of single yeast cells. We extended these NAPA studies from yeast to other microorganisms, including green algae (Chlamydomonas reinhardtii) that captured energy from sunlight on a massive scale. Combining cellular perturbations, e.g., through environmental changes, with the newly developed single cell analysis methods enabled us to follow dynamic changes induced in the cells. In effect, we were able to use individual cells as a “laboratory,” and approached the long-standing goal of establishing a “lab-in-a-cell.” Model systems for these studies included cells of cyanobacteria (Anabaena), yeast (Saccharomyces cerevisiae), green algae (C. reinhardtii) and Arabidopsis thaliana.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Targeted Mineral Carbonation to Enhance Wellbore Integrity [Final Report]

This project evaluated the potential to deploy targeted carbonation reactions to the leading edge of leaking CO 2 ganglion as a strategy for mitigating leakage from deep CO 2 injection sites. Tasks that were performed for this objective included (i) Maintaining and revising the project management and planning; (ii) Developing novel stimuli-responsive materials that release mineral silicates only below a target temperature; (iii) Imaging of subsamples from targeted carbonation demonstration experiments in porous media and fractured wellborn-zone environments; and (iv) Building models to best fit the experiment results and confirm the hypothesis driving this work.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Large space structures controls research and development at Marshall Space Flight Center: Status and future plans

Work performed in Large Space Structures Controls research and development program at Marshall Space Flight Center is described. Studies to develop a multilevel control approach which supports a modular or building block approach to the buildup of space platforms are discussed. A concept has been developed and tested in three-axis computer simulation utilizing a five-body model of a basic space platform module. Analytical efforts have continued to focus on extension of the basic theory and subsequent application. Consideration is also given to specifications to evaluate several algorithms for controlling the shape of Large Space Structures.

Buchanan, H. J.↗

Collective I/O Tuning Using Analytical and Machine-Learning Models

The ever larger demand of scientific applications for computation and data is currently driving a continuous increase in scale of parallel computers. The inherent complexity of scaling up a computing systems in terms of both hardware and software stack exposes an increasing number of factors impacting the performance and complicating the process of optimization. In particular, the optimization of parallel I/O has become increasingly challenging due to increasing storage hierarchy and well known performance variability of shared storage systems. This paper focuses on model-based autotuning of the two-phase collective I/O algorithm from a popular MPI distribution on the Blue Gene/Q architecture. We propose a novel hybrid model, constructed as a composition of analytical models for communication and storage operations and black-box models for the performance of the individual operations. We perform an in-depth study of the complexity involved in performance modeling including architecture, software stack and noise. In particular we address this challenges of modeling the performance of shared storage systems by building a benchmark that helps synthesizing factors such as topology, file caching, and noise. The experimental results show that the hybrid approach produces significantly better results than state-of-the-art machine learning approaches and shows a higher robustness to noise, at the cost of a higher modeling complexity

I/O performance modeling↗

Analyzing Data for Systems Biology: Working at the Intersection of Thermodynamics and Data Analytics

Many challenges in systems biology have to do with analyzing data within the framework of molecular phenomena and cellular pathways. How does this relate to thermodynamics that we know govern the behavior of molecules? Making progress in relating data analysis to thermodynamics is essential in systems biology if we are to build predictive models that enable the field of synthetic biology. This report discusses work at the crossroads of thermodynamics and data analysis, and demonstrates that statistical mechanical free energy is a multinomial log likelihood. Applications to systems biology are presented.

Environmental Molecular Sciences Laboratory↗

Real‐time quantification and supplementation of bioreactor amino acids to prolong culture time and maintain antibody product quality

Abstract Real‐time monitoring of cell cultures in bioreactors can enable expedited responses necessary to correct potential batch failure perturbations which may normally go undiscovered until the completion of the batch and result in failure. Currently, analytical technologies are dedicated to real‐time monitoring of bioreactor parameters such as pH, dissolved oxygen, and temperature, nutrients such as glucose and glutamine, or metabolites such as lactate. Despite the importance of amino acids as the building blocks of therapeutic protein products, other than glutamine their concentrations are not commonly measured. Here, we present a study into amino acid monitoring, supplementation strategies, and how these techniques may impact the cell growth profiles and product quality. We used preliminary bioreactor runs to establish baselines by determining initial amino acid consumption patterns, the results of which were used to select a pool of amino acids which gets depleted in the bioreactor. These amino acids were combined into blends which were supplemented into bioreactors during a subsequent run, the concentrations of which were monitored using a mass spectrometry based at‐line method we developed to quickly assess amino acid concentrations from crude bioreactor media. We found that these blends could prolong culture life, reversing a viable cell density decrease that was leading to batch death. Additionally, we assessed how these strategies might impact protein product quality, such as the glycan profile. The amino acid consumption data were aligned with the final glycan profiles in principal component analysis to identify which amino acids are most closely associated with glycan outcomes.

Powers, David N.↗

Geometry-Induced Spatial Variation of Microstructure Evolution During Selective Electron Beam Melting of Rene-N5

High gamma prime (γ') nickel-based alloys produced by selective electron beam melting are of interest to the turbine industry which requires control of microstructure in relation to loading conditions within complex component geometry. Welding literature predicts cracking and microstructure evolution as a function of alloy composition and process parameters in this class of alloys. In addition, Additive manufacturing causes variations in the above conditions due to the interaction of geometry on processing and heat transfer. The influence of geometry on processing conditions was explored for alloy Rene N5 by characterizing the solidification grain microstructure and solid-state precipitation. A Semi-Analytical Heat Transfer Model was employed to explain the resulting variation in solidification grain morphology that occurred due to the part geometry. Finally, the as-built precipitation structure was found to vary as a function of build height and had no correlation to the solidification grain structure or the layer geometry.

36 MATERIALS SCIENCE↗

Solving the Grad–Shafranov equation using spectral elements for tokamak equilibrium with toroidal rotation

The Grad–Shafranov equation is solved using spectral elements for tokamak equilibrium with toroidal rotation. The Grad–Shafranov solver builds upon and extends the NIMEQ code (Howell and Sovinec, 2014) previously developed for static tokamak equilibria. Both geometric and algebraic convergence are achieved as the polynomial degree of the spectral-element basis increases. A new analytical solution to the Grad–Shafranov equation is obtained for Solov’ev equilibrium in presence of rigid toroidal rotation, in addition to a previously obtained analytical solution for a different set of equilibrium and rotation profiles. The numerical solutions from the extended NIMEQ are benchmarked with the analytical solutions, with good agreements. Besides, the extended NIMEQ code is benchmarked with the FLOW code (Guazzotto et al., 2004). The modification of pressure profile induced by toroidal flow is investigated. The relative change of pressure profile is found significant around the edge.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗