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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 703 records · Page 39
All sourcesNASA NTRSDOE OSTI
DOE OSTI2023

Layer-wise Imaging Dataset from Powder Bed Additive Manufacturing Processes for Machine Learning Applications (Peregrine v2021-03)

This dataset contains layer-wise powder bed images from three different powder bed printing technologies – laser powder bed fusion, electron beam powder bed fusion, and binder jetting. This dataset was collected and annotated using the internally-developed Peregrine software tool and is designed primarily to facilitate research into anomaly defect detection using image segmentation or similar techniques. A total of 20 layers are provided for each printing technology, with each layer of data consisting of one or more calibrated images and an annotation file containing pixel-wise ground truth labels. The ground truths were labeled by domain experts, typically printer technicians. Data in this release were collected at Oak Ridge National Laboratory between 2016 and 2020 and were compiled in March 2021.

36 MATERIALS SCIENCE↗
DOE OSTI2015

SBOL Visual: A Graphical Language for Genetic Designs

Synthetic Biology Open Language (SBOL) Visual is a graphical standard for genetic engineering. We report that it consists of symbols representing DNA subsequences, including regulatory elements and DNA assembly features. These symbols can be used to draw illustrations for communication and instruction, and as image assets for computer-aided design. SBOL Visual is a community standard, freely available for personal, academic, and commercial use (Creative Commons CC0 license). We provide prototypical symbol images that have been used in scientific publications and software tools. We encourage users to use and modify them freely, and to join the SBOL Visual community: http://www.sbolstandard.org/visual.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2016

Visualization of metabolic interaction networks in microbial communities using VisANT 5.0

Here, the complexity of metabolic networks in microbial communities poses an unresolved visualization and interpretation challenge. We address this challenge in the newly expanded version of a software tool for the analysis of biological networks, VisANT 5.0. We focus in particular on facilitating the visual exploration of metabolic interaction between microbes in a community, e.g. as predicted by COMETS (Computation of Microbial Ecosystems in Time and Space), a dynamic stoichiometric modeling framework. Using VisANT's unique meta-graph implementation, we show how one can use VisANT 5.0 to explore different time-dependent ecosystem-level metabolic networks. In particular, we analyze the metabolic interaction network between two bacteria previously shown to display an obligate cross-feeding interdependency. In addition, we illustrate how a putative minimal gut microbiome community could be represented in our framework, making it possible to highlight interactions across multiple coexisting species. We envisage that the "symbiotic layout" of VisANT can be employed as a general tool for the analysis of metabolism in complex microbial communities as well as heterogeneous human tissues.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2020

BinaryCIF and CIFTools—Lightweight, efficient and extensible macromolecular data management

3D macromolecular structural data is growing ever more complex and plentiful in the wake of substantive advances in experimental and computational structure determination methods including macromolecular crystallography, cryo-electron microscopy, and integrative methods. Efficient means of working with 3D macromolecular structural data for archiving, analyses, and visualization are central to facilitating interoperability and reusability in compliance with the FAIR Principles. We address two challenges posed by growth in data size and complexity. First, data size is reduced by bespoke compression techniques. Second, complexity is managed through improved software tooling and fully leveraging available data dictionary schemas. To this end, we introduce BinaryCIF, a serialization of Crystallographic Information File (CIF) format files that maintains full compatibility to related data schemas, such as PDBx/mmCIF, while reducing file sizes by more than a factor of two versus gzip compressed CIF files. Moreover, for the largest structures, BinaryCIF provides even better compression—factor ten and four versus CIF files and gzipped CIF files, respectively. Herein, we describe CIFTools, a set of libraries in Java and TypeScript for generic and typed handling of CIF and BinaryCIF files. Together, BinaryCIF and CIFTools enable lightweight, efficient, and extensible handling of 3D macromolecular structural data.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2015

A Robust and Versatile Method of Combinatorial Chemical Synthesis of Gene Libraries via Hierarchical Assembly of Partially Randomized Modules

A major challenge in gene library generation is to guarantee a large functional size and diversity that significantly increases the chances of selecting different functional protein variants. The use of trinucleotides mixtures for controlled randomization results in superior library diversity and offers the ability to specify the type and distribution of the amino acids at each position. Here we describe the generation of a high diversity gene library using tHisF of the hyperthermophile Thermotoga maritima as a scaffold. Combining various rational criteria with contingency, we targeted 26 selected codons of the thisF gene sequence for randomization at a controlled level. We have developed a novel method of creating full-length gene libraries by combinatorial assembly of smaller sub-libraries. Full-length libraries of high diversity can easily be assembled on demand from smaller and much less diverse sublibraries, which circumvent the notoriously troublesome long-term archivation and repeated proliferation of high diversity ensembles of phages or plasmids. We developed a generally applicable software tool for sequence analysis of mutated gene sequences that provides efficient assistance for analysis of library diversity. Finally, practical utility of the library was demonstrated in principle by assessment of the conformational stability of library members and isolating protein variants with HisF activity from it. Our approach integrates a number of features of nucleic acids synthetic chemistry, biochemistry and molecular genetics to a coherent, flexible and robust method of combinatorial gene synthesis.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2020

Systems biology markup language (SBML) level 3 package: multistate, multicomponent and multicompartment species, version 1, release 2

Rule-based modeling is an approach that permits constructing reaction networks based on the specification of rules for molecular interactions and transformations. These rules can encompass details such as the interacting sub-molecular domains and the states and binding status of the involved components. Conceptually, fine-grained spatial information such as locations can also be provided. Through “wildcards” representing component states, entire families of molecule complexes sharing certain properties can be specified as patterns. This can significantly simplify the definition of models involving species with multiple components, multiple states, and multiple compartments. The systems biology markup language (SBML) Level 3 Multi Package Version 1 extends the SBML Level 3 Version 1 core with the “type” concept in the Species and Compartment classes. Therefore, reaction rules may contain species that can be patterns and exist in multiple locations. Multiple software tools such as Simmune and BioNetGen support this standard that thus also becomes a medium for exchanging rule-based models. This document provides the specification for Release 2 of Version 1 of the SBML Level 3 Multi package. No design changes have been made to the description of models between Release 1 and Release 2; changes are restricted to the correction of errata and the addition of clarifications.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2023

Hourly temperature and surface water level at the Ikpikpuk delta from 5/2012 to 11/2012

This data package includes the soil temperature and surface water level observations in 2012 at the Ikpikpuk River delta in northern Alaska. The data file consists of the observation table with both the .xlsx and .csv file formats. The files can be accessed through several software tools, like Microsoft Excel, and text editors. This is raw data from the near-surface ground temperature sensors at 15 cm (active layer) and 100 cm (permafrost) soil depth and a surface water sensor at the Ikpikpuk delta site in Alaska, US. The Ikpikpuk River delta is located on the Arctic Coastal Plain of northern Alaska. The Ikpikpuk River drains a land area of 15,330 km2, emptying into Smith Bay, and the delta is fan-shaped with an aerial extent of 106 km2 (Fuchs et al., 2018). This dataset supports the publication entitled "The thermal response of permafrost to coastal floodplain flooding" submitted to Environmental Research Letters (under review), where the observed water level is used as the upper boundary condition for the model simulations and the observed subsurface temperature is compared with the model simulations to answer the question about how coastal flooding affects permafrost thaw.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2023

Recent streamflow trends across permafrost basins of North America: Datasets

Climate change impacts, including changing temperatures, precipitation, and vegetation, are widely anticipated to cause major shifts to the permafrost with resulting impacts to hydro-ecosystems across the high latitudes of the globe. However, it is challenging to examine streamflow shifts in these regions owing to a paucity of data, discontinuity of records, and other issues related to data consistency and accuracy. We looked at recent changes in streamflow over 1976-2021 in watersheds affected by varying degrees of permafrost coverage to characterize trends and drivers for a range of watersheds across North America. Data sets are described in detail in the paper associated with this data set, Bennett et al. 2023, Front. Water - Water and Critical Zone, DOI: 10.3389/frwa.2023.1099660.These data contain CSV files of the streamflow, climate, and land surface characteristics for several sites located across the high latitude regions of North America. Both observed and reanalysis data products are provided. These files can be opened using Excel or a text editor, or they can be read, and analyzed in software tools such as Python or R. A brief description of the files is below, and more details can be found in the Methods section.rabpro_stats_north_select_74_55m.csv - This file describes the observed gages used in the analysis.GF31_23_metadat.csv - This file describes the 23 permafrost systems. Columns are as described in rabpro_stats_north_select_74_55m.csv above, with rabpro_id, the id used for the timeseries file mapping in GF31_23_time_series.csv.GF31_23_time_series.csv - This file contains the time series data for the stations described in GF31_23_metadat.csv.GF31_random_reaches_1583.csv - This file describes the 1583 randomly selected permafrost-dominant sites for machine learning analysis.era5_GF31_monthly_vars_random_reaches_1583.csv - This file contains the monthly ERA5 land data for the 1583 randomly selected permafrost-dominant sites.observed.zip: USGS and Hydat station data for the 74 gages analyzed in this study. Monthly, seasonal, and annual streamflow observations for minimum streamflow, mean streamflow, and maximum streamflow. Units are m3/sec. 1975-2022.streamflow_daily_GF31_infilled_1979_2022.csv - infilled daily streamflow data (infilled using GloFAS v 3.1) for 55 gages. Units are m3/sec. 1979-2022.glofas_23.zip - Glofas v3.1 file for the 23 permafrost-dominant gages in the study. Monthly, seasonal, and annual streamflow observations for minimum streamflow, mean streamflow, and maximum streamflow. Units are m3/sec. 1979-2021.glofas_1583.zip - Glofas v3.1 file for the 1583 randomly selected permafrost-dominant gages in the study. Monthly, seasonal, and annual streamflow observations for minimum streamflow, mean streamflow, and maximum streamflow. Units are m3/sec. 1979-2021.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2026

Geomatchd

Geomatchd is a software tool to assist non-experts in the rapid conceptual design of geothermal district heating systems. This tool comprises three main parts: user-side heating and cooling demand profiles, district heating and cooling (DHC) network models for sizing and optimal layout selection, and geothermal system models for heat extraction calculation and cost comparison. The architecture of Geomatchd is opensource and is intended to simplify efforts by other coders to improve on existing functions, to add functions and to leverage available existing code and data – to improve the tool for public use. Geomatchd and the material supporting its development may provide a more intuitive window on district heating and the use of local shallow geothermal resources.

AS↗
DOE OSTI2022

Applications of GIS and remote sensing in public participation and stakeholder engagement for watershed management

The use of Geographic Information Systems (GIS) and remote sensing technologies for the development of water quality management programs and for post-implementation assessments has increased dramatically in the past decade. This increase in adoption has been made more accessible through the interfaces of many popular software tools used in the regulation and assessment of water quality. Customized applications of these tools will increase, as ease of access and affordability of directly monitored and remotely sensed datasets improve over time. Concurrently, there is a need for inclusive participatory engagement with stakeholders to achieve solutions to current watershed management challenges. This paper explores the potential of these GIS and remote sensing datasets, tools, models, and immersive engagement technologies from other domains, for improving public participation and stakeholder engagement throughout the watershed planning process. To do so, an initial review is presented about the use of GIS and remote sensing in watershed management and its role in impairment identification, model development, and planning and implementation. Then, ways in which GIS and remote sensing can be integrated with stakeholder engagement through (1) leveraging GIS and remote sensing datasets, and (2) stakeholder engagement approaches including outreach and education, modeler-led development, and stakeholder-led involvement and feedback, are discussed. Finally, future perspectives on the potential for transforming public participation and stakeholder engagement in the watershed management process through applications of GIS and remote sensing are presented.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2017

The Beam-Beam Effect and its Consequences for the Jefferson Lab EIC

In this work we address the effect of beam jitter on emittance growth as caused by the beam-beam effect on the Jefferson Lab Electron Ion Collider (JLEIC). This proposed collider would collide up to 100 GeV proton beams with up to 10 GeV electron beams. Due to the asymmetric rigidities of the beams and their non-linear lensing action on each other during a collision, collective effects can limit beam storage times. Using simulations we determined that one of JLEIC’s synchronization concepts would require a new set of software tools to accurately understand phase space evolution.

Nissen, Edward↗
DOE OSTI2018

New Methods for Dispersion Measurement and Correction for 12GeV CEBAF

This paper discusses methods for dispersion measurement and correction for the Continuous Electron Beam Accelerator Facility (CEBAF) for the 12GeV era. New methods will be compared with methods used during the 6GeV era. New software tools which implement the new methods will be discussed, along with a method for automating dispersion measurement and correction. New dispersion measurement and correction methods and tools are being implemented to provide more deterministic results and to reduce machine setup time.

Turner, Dennis L.↗
DOE OSTI2020

bifacial_radiance: a python package for modeling bifacial solar photovoltaic systems

bifacial_radiance is a national-laboratory-developed, community-supported, open-source toolkit that provides a set of functions and classes for simulating the performance of bifacial photovoltaic (PV) systems. (Bifacial PV modules collect light on the front as well as the rear side.) bifacial_radiance automates calculations of PV system layout and performance to use along with the popular ray-tracing software tool RADIANCE (Ward, 1994). Specific algorithms include design and layout of PV modules, reflective ground surfaces, shading obstructions, and irradiance calculations throughout the system, among others. bifacial_radiance is an important component of a growing ecosystem of open-source tools for solar energy (William F Holmgren et al., 2018).

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2012

Recovery Act: A Measurement -- Management Technology for Improving Energy Efficiency in Data Centers and Telecommunication Facilities (Final Technical Report)

Data center (DC) electricity use is increasing at an annual rate of over 20% and presents a concern for the Information Technology (IT) industry, governments, and the society. A large fraction of the energy use is consumed by the compressor cooling to maintain the recommended operating conditions for IT equipment. The most common way to improve the DC efficiency is achieved by optimally provisioning the cooling power to match the global heat dissipation in the DC. However, at a more granular level, the large range of heat densities of today's IT equipment makes the task of provisioning cooling power optimized to the level of individual computer room air conditioning (CRAC) units much more challenging. Distributed sensing within a DC enables the development of new strategies to improve energy efficiency, such as hot spot elimination through targeted cooling, matching power consumption at rack level with workload schedule, and minimizing power losses. The scope of Measurement and Management Technologies (MMT) is to develop a software tool and the underlying sensing technology to provide critical decision support and control for DC and telecommunication facilities (TF) operations. A key aspect of MMT technology is integration of modeling tools to understand how changes in one operational parameter affect the overall DC response. It is demonstrated that reduced ordered models for DC can generate, in less than 2 seconds computational time, a three dimensional thermal model in a 50 kft 2 DC. This rapid modeling enables real time visualization of the DC conditions and enables "0what if" scenarios simulations to characterize response to "disturbances". One such example is thermal zone modeling that matches the cooling power to the heat generated at a local level by identifying DC zones cooled by a specific CRAC. Turning off a CRAC unit can be simulated to understand how the other CRAC utilization changes and how server temperature responds. Several new sensing technologies were added to the existing MMT platform: (1) air contamination (corrosion) sensors, (2) power monitoring, and (3) a wireless environmental sensing network. All three technologies are built on cost effective sensing solutions that increase the density of sensing points and enable high resolution mapping of DCs. The wireless sensing solution enables Air Conditioning Unit (ACU) control while the corrosion sensor enables air side economization and can quantify the risk of IT equipment failure due to air contamination. Validation data for six test sites demonstrate that leveraging MMT energy efficiency solutions combined with industry best practices results in an average of 20% reduction in cooling energy, without major infrastructure upgrades. As an illustration of the unique MMT capabilities, a data center infrastructure efficiency (DCIE) of 87% (industry best operation) was achieved. The technology is commercialized through IBM System and Technology Lab Services that offers MMT as a solution to improve DC energy efficiency. Estimation indicates that deploying MMT in existing DCs can results in an 8 billion kWh savings and projection indicates that constant adoption of MMT can results in obtainable savings of 44 billion kWh in 2035. Negotiations are under way with business partners to commercialize/license the ACU control technology and the new sensor solutions (corrosion and power sensing) to enable third party vendors and developers to leverage the energy efficiency solutions.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗
DOE OSTI2012

Ocean Thermal Extractable Energy Visualization (Final Technical Report)

The Ocean Thermal Extractable Energy Visualization (OTEEV) project focuses on assessing the Maximum Practicably Extractable Energy (MPEE) from the world's ocean thermal resources. MPEE is defined as being sustainable and technically feasible, given today's state-of-the-art ocean energy technology. Under this project the OTEEV team developed a comprehensive Geospatial Information System (GIS) dataset and software tool, and used the tool to provide a meaningful assessment of MPEE from the global and domestic U.S. ocean thermal resources. The OTEEV project leverages existing NREL renewable energy GIS technologies and integrates extractable energy estimated from quality-controlled data and projected optimal achievable energy conversion rates. Input data are synthesized from a broad range of existing in-situ measurements and ground-truthed numerical models with temporal and spatial resolutions sufficient to reflect the local resource. Energy production rates are calculated for regions based on conversion rates estimated for current technology, local energy density of the resource, and sustainable resource extraction. Plant spacing and maximum production rates are then estimated based on a default plant size and transmission mechanisms. The resulting data are organized, displayed, and accessed using a multi-layered GIS mapping tool, http://maps.nrel.gov/mhk_atlas with a user-friendly graphical user interface.

14 SOLAR ENERGY↗
DOE OSTI2012

The Secret Life of Quarks, Final Report for the University of North Carolina at Chapel Hill

This final report summarizes activities and results at the University of North Carolina as part of the the SciDAC-2 Project The Secret Life of Quarks: National Computational Infrastructure for Lattice Quantum Chromodynamics. The overall objective of the project is to construct the software needed to study quantum chromo- dynamics (QCD), the theory of the strong interactions of subatomic physics, and similar strongly coupled gauge theories anticipated to be of importance in the LHC era. It built upon the successful efforts of the SciDAC-1 project National Computational Infrastructure for Lattice Gauge Theory, in which a QCD Applications Programming Interface (QCD API) was developed that enables lat- tice gauge theorists to make effective use of a wide variety of massively parallel computers. In the SciDAC-2 project, optimized versions of the QCD API were being created for the IBM Blue- Gene/L (BG/L) and BlueGene/P (BG/P), the Cray XT3/XT4 and its successors, and clusters based on multi-core processors and Infiniband communications networks. The QCD API is being used to enhance the performance of the major QCD community codes and to create new applications. Software libraries of physics tools have been expanded to contain sharable building blocks for inclusion in application codes, performance analysis and visualization tools, and software for au- tomation of physics work flow. New software tools were designed for managing the large data sets generated in lattice QCD simulations, and for sharing them through the International Lattice Data Grid consortium. As part of the overall project, researchers at UNC were funded through ASCR to work in three general areas. The main thrust has been performance instrumentation and analysis in support of the SciDAC QCD code base as it evolved and as it moved to new computation platforms. In support of the performance activities, performance data was to be collected in a database for the purpose of broader analysis. Third, the UNC work was done at RENCI (Renaissance Computing Institute), which has extensive expertise and facilities for scientific data visualization, so we acted in an ongoing consulting and support role in that area.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2012

Battery Technology Life Verification Test Manual Revision 1

The purpose of this Technology Life Verification Test (TLVT) Manual is to help guide developers in their effort to successfully commercialize advanced energy storage devices such as battery and ultracapacitor technologies. The experimental design and data analysis discussed herein are focused on automotive applications based on the United States Advanced Battery Consortium (USABC) electric vehicle, hybrid electric vehicle, and plug-in hybrid electric vehicle (EV, HEV, and PHEV, respectively) performance targets. However, the methodology can be equally applied to other applications as well. This manual supersedes the February 2005 version of the TLVT Manual (Reference 1). It includes criteria for statistically-based life test matrix designs as well as requirements for test data analysis and reporting. Calendar life modeling and estimation techniques, including a user’s guide to the corresponding software tool is now provided in the Battery Life Estimator (BLE) Manual (Reference 2).

25 ENERGY STORAGE↗