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At least 703 records · Page 39
All sourcesNASA NTRSDOE OSTI
DOE OSTI2023

Deep learning integrates histopathology and proteogenomics at a pan-cancer level

We introduce a pioneering approach that integrates pathology imaging with transcriptomics and proteomics to identify predictive histology features associated with critical clinical outcomes in cancer. We utilize 2,755 H&E-stained histopathological slides from 657 patients across 6 cancer types from CPTAC. Our models effectively recapitulate distinctions readily made by human pathologists: tumor vs. normal (AUROC = 0.995) and tissue-of-origin (AUROC = 0.979). We further investigate predictive power on tasks not normally performed from H&E alone, including TP53 prediction and pathologic stage. Importantly, we describe predictive morphologies not previously utilized in a clinical setting. The incorporation of transcriptomics and proteomics identifies pathway-level signatures and cellular processes driving predictive histology features. Model generalizability and interpretability is confirmed using TCGA. We propose a classification system for these tasks, and suggest potential clinical applications for this integrated human and machine learning approach. A publicly available web-based platform implements these models.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2023

1-D Convolutional Graph Convolutional Networks for Fault Detection in Distributed Energy Systems

This paper presents a 1-D convolutional and graph convolutional networks for fault detection in microgrids. The combination of 1-D convolutional neural networks (1D-CNN) and graph convolutional networks (GCN) helps extract both spatial-temporal correlations from the voltage measurements in microgrids. The fault detection scheme includes fault event detection, fault type and phase classification, and fault location. There are five neural network model training to handle these tasks. Transfer learning and fine-tuning are applied to reduce training efforts. The combined 1-D convolutional and graph convolutional networks (1D-CGCN) is compared with the traditional ANN structure on the Potsdam 13-bus microgrid dataset. The accuracy of 99.5%, 98.4%, 99.2%, and 95.5% are achieved in fault event detection, fault type classification, fault phase identification, and fault location respectively. The detailed confusion matrices of fault type and fault phase classification are provided for validation.

deep neural network↗
DOE OSTI2025

Predicting Large‐Scale Systematic Missing Pipe Attributes in Water Distribution Networks

Water distribution network (WDN) models are an essential tool used by water utilities for hydraulic analysis. Unfortunately, missing data and insufficient resources often make creating and maintaining these models unfeasible. Existing methods to address missing pipe properties, like sequential imputation for missing values and reconstruction using graph metrics, are designed to accommodate random patterns of missing information and require a significant percentage of the system's attributes to be known. However, these data completeness assumptions do not always align with real‐world scenarios where large sections of the WDN model have missing data. To address this challenge, this study proposes a data‐driven approach for estimating pipe diameter when considering different spatial patterns and degrees of data completeness (i.e., 0%–90%). Using data from 16 WDNs in Kentucky, this study compares the use of machine learning (ML) using topological and geospatial features against an existing deterministic approach. Results demonstrate that WDN models with pipe diameters predicted by the proposed ML method had comparable hydraulic performance to the ground truth models. Moreover, results showed that ML method performance varies between WDNs of differing topological classification. Insights from this study help advance the ability to leverage partial data to create and maintain WDN models amid uncertainty and inadequate resources.

Poff, Jason W. [Oregon State Univ., Corvallis, OR ↗
NASA NTRS2020

A Machine Learning-Based Cloud Detection and Thermodynamic Phase Classification Algorithm using Passive Spectral Observations

We trained two Random Forest (RF) machine-learning models for cloud mask and cloud thermodynamic phase detection using spectral observations from VIIRS on Suomi NPP (SNPP). Observations from CALIOP were carefully selected to provide reference labels. The two RF models were trained for all-day and daytime-only conditions using a 4-year collocated VIIRS/CALIOP dataset from 2013 to 2016. Due to the orbit difference, the collocated CALIOP and SNPP VIIRS training samples cover a broad viewing zenith angle range, which is a great benefit to overall model performance. The all-day model uses 3 VIIRS infrared (IR) bands (8.6,11, and 12 μm) and the daytime model uses 5 Near-IR (NIR) and Shortwave-IR (SWIR) bands (0.86, 1.24, 1.38, 1.64 and 2.25 μm) together with the 3 IR bands to detect clear, liquid water, and ice cloud pixels. Up to 7 surface types, namely, ocean/water, forest, cropland, grassland, snow/ice, barren/desert, and shrubland, were considered separately to enhance performance for both models. Detection of cloudy pixels and thermodynamic phase with the two RF models were compared against collocated CALIOP products from 2017. It is shown that, with a conservative screening process that excludes the most challenging cloudy pixels for passive remote sensing, the two RF models have high accuracy rates in comparison with the CALIOP reference for both cloud detection and thermodynamic phase. Other existing SNPP VIIRS and Aqua MODIS cloud mask and phase products are also evaluated, with results showing that the two RF models and the MODIS MYD06 optical property phase product are the top 3 algorithms with respect to lidar observations during the daytime. During the nighttime, the RF all-day model works best for both cloud detection and phase, in particular for pixels over snow/ice surfaces. The present RF models can be extended to other similar passive instruments if training samples can be collected from CALIOP or other lidars. However, the quality of reference labels and potential sampling issues that may impact model performance would need further attention.

cloud detection↗
DOE OSTI2021

A novel construct for scaling groundwater–river interactions based on machine-guided hydromorphic classification

Hydrologic exchange between river channels and adjacent subsurface environments is a key process that influences water quality and ecosystem function in river corridors. Predictive numerical models are needed to understand responses of river corridors to environmental change and to support sustainable watershed management. We posit that systematic hydromorphic classification provides a scaling construct that facilitates extrapolation of outputs from local-scale mechanistic models to reduced-order models applicable at reach and watershed scales. This in turn offers the potential to improve large-scale predictions of river corridor hydrobiogeochemical processes. Here we present a new machine-guided hydromorphic classification methodology that addresses the key requirements of this objective, and we demonstrate its application to a segment of the Columbia River in the northwestern United States. The resulting hydromorphic classes form spatially coherent and physically interpretable hydromorphic units that exhibit distinct behaviors in terms of distributions of subsurface residence times (a primary control on critical biogeochemical reactions). This approach forms the basis of ongoing research that is evaluating the formulation of reduced-order models and transferability of results to other river reaches and larger scales.

54 ENVIRONMENTAL SCIENCES↗
NASA NTRS1984

IUE observations of the clusters of the Magellanic Clouds

IUE observations of 17 clusters in the Large Magellanic Cloud are presented. The derived ultraviolet colors become progressively redder as the cluster's classification in the scheme of Searle, Wilkinson, and Bagnuolo increases. With the aid of theoretical models of the integrated light of coeval clusters of varying ages, it is shown that the SWB classification is one of increasing age accompanied by decreasing metallicity toward later SWB classes. The behavior of the UV absorption line features in the integrated light of the LMC clusters supports the contention.

Cohen, J. G.↗
DOE OSTI2022

Group-Invariant Quantum Machine Learning

Quantum machine learning (QML) models are aimed at learning from data encoded in quantum states. Recently, it has been shown that models with little to no inductive biases (i.e., with no assumptions about the problem embedded in the model) are likely to have trainability and generalization issues, especially for large problem sizes. As such, it is fundamental to develop schemes that encode as much information as available about the problem at hand. In this work we present a simple, yet powerful, framework where the underlying invariances in the data are used to build QML models that, by construction, respect those symmetries. These so-called group-invariant models produce outputs that remain invariant under the action of any element of the symmetry group $\mathfrak{G}$ associated with the dataset. We present theoretical results underpinning the design of $\mathfrak{G}$-invariant models, and exemplify their application through several paradigmatic QML classification tasks, including cases when $\mathfrak{G}$ is a continuous Lie group and also when it is a discrete symmetry group. Notably, our framework allows us to recover, in an elegant way, several well-known algorithms for the literature, as well as to discover new ones. Taken together, we expect that our results will help pave the way towards a more geometric and group-theoretic approach to QML model design.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2023

Graph Neural Network for Object Reconstruction in Liquid Argon Time Projection Chambers

The Exa.TrkX project presents a graph neural network (GNN) technique for low-level reconstruction of neutrino interactions in a Liquid Argon Time Projection Chamber (LArTPC). GNNs are still a relatively novel technique, and have shown great promise for similar reconstruction tasks in the Large Hadron Collider (LHC). Graphs describing particle interactions are formed by treating each detector hit as a node, with edges describing the relationships between hits. We utilise a multi-head attention message passing network which performs graph convolutions in order to label each node with a particle type.We present an updated variant of our GNN architecture, with several improvements. After testing the model on more realistic simulation with regions of unresponsive wires, the target was modified from edge classification to node classification in order to increase robustness. Removing edges as a classification target opens up a broader possibility space for edge-forming techniques; we explore the model’s performance across a variety of approaches, such as Delaunay triangulation, kNN, and radius-based methods. We also extend this model to the 3D context, sharing information between detector views. By using reconstructed 3D spacepoints to map detector hits from each wire plane, the model naively constructs 2D representations that are independent yet fully consistent.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗
DOE OSTI2025

popclass: A Python Package for Classifying Microlensing Events

popclass is a Python package that provides a flexible, probabilistic framework for classifying the lens of a gravitational microlensing event. Gravitational microlensing occurs when a massive foreground object (e.g., a star, white dwarf or black hole) passes in front of and lenses the light from a distant background source. This causes an apparent brightening, and shift in position, of the background source. In most cases, characteristics of the microlensing signal do not contain enough information to definitively identify the lens type. Different lens types lie in different but overlapping regions of the characteristics of the microlensing signal. For example, black holes tend to be more massive than stars and therefore cause microlensing signals that are longer. Current Galactic simulations enable us to predict where different lens types lie in the observational space and can therefore be used to classify events (e.g., Lam et al., 2020). popclass allows the user to match the characteristics of a microlensing signal with a simulation of the Galaxy to calculate lens type probabilities for the event (see Figure 1). Constraints on any microlensing signal properties and any Galactic model can be used. popclass comes with an interface to ArviZ (Kumar et al., 2019) and PyMultiNest (Buchner et al., 2014) for microlensing signal constraints, as well as pre-loaded Galactic models, plotting functionality, and methods to quantify the classification uncertainty. The probabilistic framework for popclass was developed in Perkins et al. (2024), used in Fardeen et al. (2024) and has been applied to classifying events in Kaczmarek et al. (2025).

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2026

Mass dependence of overshooting beneath convective envelopes

State of the art stellar evolution codes [Paxton et al., 2010, Demarque et al., 2004, Weiss and Schlattl, 2008, Siess et al., 2013, Christensen-Dalsgaard, 2008] evoke a diffusive process to model convective overshooting. The diffusion coefficient [Freytag et al., 1996, Pratt et al., 2017] used in the model can be set to change with the classification of the convective zone as non-burning, H-burning, He-burning, or metal-burning. It can also be set to change at defined evolutionary points, such as the bottom of the asymptotic giant branch, or during the third dredge up [Herwig, 2000, Lugaro et al., 2003]. Aside from these abrupt changes, the diffusion coefficient is typically locked to a percentage of the pressure scale height measured at the convective boundary. However, there is no theoretical reason for convective overshooting, or indeed other convective properties, to change in the same way that the pressure scale height changes as a star evolves.

79 ASTRONOMY AND ASTROPHYSICS↗
NASA NTRS1982

Evaluation of land cover change detection techniques using Landsat MSS data

Four techniques for detecting land cover change with Landsat MSS data were evaluated for a test site in east central Louisiana where forestland is being converted to cropland and pasture. The four techniques were: (1) post-classification differencing, (2) composite classification, (3) radiance value shift, and (4) regression modeling. Three of the techniques gave acceptable accuracies. The main differences were the amount of computer time and the level of complexity.

Burns, G. S.↗
NASA NTRS1989

The evaluative imaging of mental models - Visual representations of complexity

The paper deals with some design issues involved in building a system that could visually represent the semantic structures of training materials and their underlying mental models. In particular, hypermedia-based semantic networks that instantiate classification problem solving strategies are thought to be a useful formalism for such representations; the complexity of these web structures can be best managed through visual depictions. It is also noted that a useful approach to implement in these hypermedia models would be some metrics of conceptual distance.

Dede, Christopher↗
NASA NTRS1990

Studies in knowledge-based diagnosis of failures in robotic assembly

The telerobot diagnostic system (TDS) is a knowledge-based system that is being developed for identification and diagnosis of failures in the space robotic domain. The system is able to isolate the symptoms of the failure, generate failure hypotheses based on these symptoms, and test their validity at various levels by interpreting or simulating the effects of the hypotheses on results of plan execution. The implementation of the TDS is outlined. The classification of failures and the types of system models used by the TDS are discussed. A detailed example of the TDS approach to failure diagnosis is provided.

Lam, Raymond K.↗
DOE OSTI2020

Figure Descriptive Text Extraction Using Ontological Representation

Abstract Experimental research publications provide figure form resources including graphs, charts, and any type of images to effectively support and convey methods and results. To describe figures, authors add captions, which are often incomplete, and more descriptions reside in body text. This work presents a method to extract figure descriptive text from the body of scientific articles. We adopted ontological semantics to aid concept recognition of figure-related information, which generates human- and machine-readable knowledge representations from sentences. Our results show that conceptual models bring an improvement in figure descriptive sentence classification over word-based approaches.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2024

Machine Learning for DUNE Supernova Trigger

One of the major scientific goals of the Deep Underground Neutrino Experiment (DUNE) is to detect and measure the neutrino flux originating from galactic core-collapse supernovae. These neutrinos provide an opportunity to study the end of life evolution of massive stars, and reveal information about the structure of core-collapse that is not visible in observations of the electromagnetic spectrum. Because of the rarity of these events, it is crucial that DUNE is able to detect supernova neutrino interactions when they occur. However, this will require sifting through a large quantity of data, motivating the development of a trigger algorithm to identify significant events and discard irrelevant data. Machine learning provides a potential approach to building this trigger. This project generates ADC and ground truth images of simulated neutrino interactions in a LArTPC detector to be used for machine learning, and uses them to train a sparse Convolutional Neural Network (C NN). The performance of this model when applied to the task of pixel classification based on interaction type is examined. This project found that the sparse CNN approach has the potential to have high accuracy in pixel classification, meaning it may be highly relevant to the development of a supernova neutrino trigger for the DUNE far detector.

Damish, S.↗
DOE OSTI2026

How efficiently can AI recognize Wireless Devices?

This poster presents a hardware benchmarking methodology for a 3-layer CNN waveform classifier deployed using ONNX Runtime on an NVIDIA Jetson AGX Orin. The dataset consist of 9 signal types, -30 to +30 dB SNR with 5dB increments. Benchmarking on the Jetson AGX Orin gave an accuracy of 91.9% and GPU throughput of 107,120 predictions/sec (23× faster than CPU). The Jetson GPU reached approximately 27M samples/sec with stable performance but fell below the 40 MHz rate needed for real-time radio feeds. Sustained testing of 5 minutes confirmed stable performance with no memory leaks, establishing a reproducible benchmarking baseline for future edge-deployment optimization.

99 - GENERAL AND MISCELLANEOUS↗