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At least 685 records · Page 38

State-based network similarity visualization

We introduce an approach for the interactive visual analysis of weighted, dynamic networks. These networks arise in areas such as computational neuroscience, sociology, and biology. Network analysis remains challenging due to complex time-varying network behavior. For example, edges disappear/reappear, communities grow/vanish, or overall network topology changes. Our technique, TimeSum, detects the important topological changes in graph data to abstract the dynamic network and visualize one summary representation for each temporal phase, a state. We define a network state as a graph with similar topology over a specific time interval. To enable a holistic comparison of networks, we use a difference network to depict edge and community changes. Here, we present case studies to demonstrate that our methods are effective and useful for extracting and exploring complex dynamic behavior of networks.

96 KNOWLEDGE MANAGEMENT AND PRESERVATION↗

Application of Frequency of Detection Methods in Design and Optimization of the INL Site Ambient Air Monitoring Network

This report presents an evaluation of a hypothetical INL Site monitoring network and the existing INL air monitoring network using frequency of detection methods. The hypothetical network was designed to address the requirement in 40 CFR Part 61, Subpart H (2006) that “emissions of radionuclides to ambient air from U.S. DOE facilities shall not exceed those amounts that would cause any member of the public to receive in any year an effective dose equivalent exceeding 10 mrem/year.” To meet the requirement for monitoring only, “radionuclide releases that would result in an effective dose of 10% of the standard shall be readily detectable and distinguishable from background.” Thus, the hypothetical network consists of air samplers placed at residence locations that surround INL and at other locations where onsite livestock grazing takes place. Two exposure scenarios were used in this evaluation: a resident scenario and a shepherd/rancher scenario. The resident was assumed to be continuously present at their residence while the shepherd/rancher was assumed to be present 24-hours at a fixed location on the grazing allotment. Important radionuclides were identified from annual INL radionuclide National Emission Standards for Hazardous Pollutants reports. Important radionuclides were defined as those that potentially contribute 1% or greater to the annual total dose at the radionuclide National Emission Standards for Hazardous Pollutants maximally exposed individual location and include H-3, Am-241, Pu-238, Pu 239, Cs-137, Sr-90, and I-131. For this evaluation, the network performance objective was set at achieving a frequency of detection greater than or equal to 95%. Results indicated that the hypothetical network for the resident scenario met all performance objectives for H-3 and I-131 and most performance objectives for Cs-137 and Sr-90. However, all actinides failed to meet the performance objectives for most sources. The shepherd/rancher scenario showed that air samplers placed around the facilities every 22.5 degrees were very effective in detecting releases, but this arrangement is not practical or cost effective. However, it was shown that a few air samplers placed in the prevailing wind direction around each facility could achieve the performance objective of a frequency of detection greater than or equal to 95% for the shepherd/rancher scenario. The results also indicate some of the current sampler locations have little or no impact on the network frequency of detection and could be removed from the network with no appreciable deterioration of performance. Results show that with some slight modifications to the existing network (i.e., additional samplers added north and south of the Materials and Fuels Complex and ineffective samplers removed), the network would achieve performance objectives for all sources for both the resident and shepherd/rancher scenario.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Identifying the Critical Links in Road Transportation Networks: Centrality-based approach utilizing structural properties

Surface transportation road networks share structural properties similar to other complex networks (e.g., social networks, information networks, biological networks, and so on). This research investigates the structural properties of road networks for any possible correlation with the traffic characteristics such as link flows those determined independently. Additionally, we define a criticality index for the links of the road network that identifies the relative importance in the network. We tested our hypotheses with two sample road networks. Results show that, correlation exists between the link flows and centrality measures of a link of the road (dual graph approach is followed) and the criticality index is found to be effective for one test network to identify the vulnerable nodes.

99 GENERAL AND MISCELLANEOUS↗

Converging voice and data over mission-critical networks

The U.S. National Aeronautics and Space Administration (NASA) Deep Space Network ?? DSN - is an international network of antennas that supports interplanetary spacecraft missions and radio and radar astronomy observations for the exploration of the solar system and the universe. The network also supports selected Earth-orbiting missions. This paper describes the ground communications network of the DSN and ways network infrastructure costs are being reduced by the introduction of new technology. Fundamentally, the DSN ground network architecture is a star network, and the hub is at JPL in Pasadena, California. Communications to customer sites are designed to minimize NASA costs and may be either shared IP backbone networks or dedicated circuits. One of the primary features of the network is its ability to support real-time data, voice, and video communications among antenna stations, an automated multi-mission operations systems facility at JPL (AMMOS), and mission operations centers (MOCs) at NASA and non-NASA facilities. Funding for advanced engineering to reduce ground network infrastructure costs was provided by the NASA Office of Space Science.

ground communications networks Internet voice VOIP↗

Wireless Mesh Networks for Small Satellites Subsystems

Wireless mesh networks are a network topology where all the nodes of a system are able to communicate with every other node in the network. This enables an adaptable network that is scalable and has the capability to self-repair and self-configure. The Modular Rapidly Manufactured Small Sat (MRMSS) Project is a small satellite project where we are developing a modular CubeSat architecture. One of the goals of the project is to develop a system that is quick and simple to integrate with a minimal amount of wiring involved. Wireless mesh networks are well suited for this configuration because of the self- configuring and self-repairing aspects of the network. This enables a satellite developer to add subsystem nodes to the network without the need for much hardware re-design. This paper will detail the background of wireless mesh networks, the advantages and limitations of using wireless mesh networks for space applications, and the technical progress of the wireless mesh network development of the MRMSS project.

CubeSats↗

Software defined network inference with evolutionary optimal observation matrices

A key requirement for network management is the accurate and reliable monitoring of relevant network characteristics. In today's large-scale networks, this is a challenging task due to the scarcity of network measurement resources and the hard constraints that this imposes. Here, this paper proposes a new framework, called SNIPER, which leverages the flexibility provided by Software-Defined Networking (SDN) to design the optimal observation or measurement matrix that can lead to the best achievable estimation accuracy using Matrix Completion (MC) techniques. To cope with the complexity of designing large-scale optimal observation matrices, we use the Evolutionary Optimization Algorithms (EOA) which directly target the ultimate estimation accuracy as the optimization objective function. We evaluate the performance of SNIPER using both synthetic and real network measurement traces from different network topologies and by considering two main applications for per-flow size and delay estimations. Our results show that SNIPER can be applied to a variety of network performance measurements under hard resource constraints. For example, by measuring only 8.8% of all per-flow path delays in Harvard network [1], congested paths can be detected with probability of 0.94. Finally, to demonstrate the feasibility of our framework, we also have implemented a prototype of SNIPER in Mininet.

97 MATHEMATICS AND COMPUTING↗

Limits of multifunctionality in tunable networks

Nature is rife with networks that are functionally optimized to propagate inputs to perform specific tasks. Whether via genetic evolution or dynamic adaptation, many networks create functionality by locally tuning interactions between nodes. Here we explore this behavior in two contexts: strain propagation in mechanical networks and pressure redistribution in flow networks. By adding and removing links, we are able to optimize both types of networks to perform specific functions. We define a single function as a tuned response of a single “target” link when another, predetermined part of the network is activated. Using network structures generated via such optimization, we investigate how many simultaneous functions such networks can be programed to fulfill. We find that both flow and mechanical networks display qualitatively similar phase transitions in the number of targets that can be tuned, along with the same robust finite-size scaling behavior. We discuss how these properties can be understood in the context of constraint–satisfaction problems.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

WSBP/NWBP small-world neural network and its performance for wind power forecasting

A small-world neural network has stronger generalization ability with high transfer efficiency than that of the regular neural networks. This paper presents two novel small-world neural networks, the Watts-Strogatz small-world based on a BP neural network (WSBP) and a Newman-Watts small-world neural network based on a BP neural network (NWBP), related to previous research of complex networks. The algorithms are developed separately by adopting WS and NW small-world networks as their topological structures, and their derivation and convergence criterion are progressively discussed. After that, the proposed models are subsequently tested by two typical nonlinear functions which confirm their significant improvement over the regular BP networks and other algorithms. Finally, a wind power prediction system is advanced to verify their generalization abilities, and show that the models are practically feasible and effective with improved accuracy and acceptable forecasting errors caused by wind fluctuation and randomness with a time scale up to 24 h.

17 WIND ENERGY↗

The Strategic Environment Assessment bibliographic network: A quantitative literature review analysis

Academic literature has been continuously growing at such a pace that it can be difficult to follow the progression of scientific achievements; hence, the need to dispose of quantitative knowledge support systems to analyze the literature of a subject. In this article we utilize network analysis tools to build a literature review of scientific documents published in the multidisciplinary field of Strategic Environment Assessment (SEA). The proposed approach helps researchers to build unbiased and comprehensive literature reviews. We collect information on 7662 SEA publications and build the SEA Bibliographic Network (SEABN) employing the basic idea that two publications are interconnected if one cites the other. We apply network analysis at macroscopic (network architecture), mesoscopic (sub graph) and microscopic levels (node) in order to i) verify what network structure characterizes the SEA literature, ii) identify the authors, disciplines and journals that are contributing to the international discussion on SEA, and iii) scrutinize the most cited and important publications in the field. Results show that the SEA is a multidisciplinary subject; the SEABN belongs to the class of real small world networks with a dominance of publications in Environmental studies over a total of 12 scientific sectors. Christopher Wood, Olivia Bina, Matthew Cashmore, and Andrew Jordan are found to be the leading authors while Environmental Impact Assessment Review is by far the scientific journal with the highest number of publications in SEA studies. - Highlights: • We utilize network analysis to analyze scientific documents in the SEA field. • We build the SEA Bibliographic Network (SEABN) of 7662 publications. • We apply network analysis at macroscopic, mesoscopic and microscopic network levels. • We identify SEABN architecture, relevant publications, authors, subjects and journals.

54 ENVIRONMENTAL SCIENCES↗

Forecasting Solar-Thermal Systems Performance under Transient Operation Using a Data-Driven Machine Learning Approach Based on the Deep Operator Network Architecture

Modeling and prediction of the dynamic behavior of thermal systems operating under intermittent energy input and variable load requirements represent one of the greatest challenges in the development of efficient and reliable renewable-based power generation technologies. In this work, a data-driven machine learning modeling framework was developed based on a modified version of the Deep Operator Network architecture where the time coordinate in the trunk net is replaced with historical data of the predicting quantity. The modeling framework can be used to accurately predict the performance of renewable-based energy conversion technologies including wind- and solar-based power plants. This novel framework was applied on a solar-thermal system that consists of a solar collection loop using a flat plate collector, a power generation loop comprising an Organic Rankine Cycle, and a thermal energy storage tank connecting both loops. Variable solar irradiance, air temperature, and power load profiles were used by the Deep Operator Network to predict the State-of-Charge and the efficiency of the thermal system for several days. The results were compared with the State-of-Charge and efficiency functions calculated using a physics-based model. For a simple operation scenario, characterized by a clear sky solar irradiance profile and constant load, the standard deviation in the State-of-Charge prediction by Deep Operator Network is below 0.9% during a seven-day prediction time horizon. For the most realistic operation scenario that considers real solar irradiance and a rough load profile, the maximum standard deviation in the predictions for the State-of-Charge and efficiency are below 6.8% and 2.5%, respectively. A comparison between Deep Operator Network and Long Short Term Memory network was also performed. In general, both networks predict very well the State-of-Charge for different data density conditions; however, a higher accuracy, with a standard deviation below 2.0%, is obtained by the Deep Operator Network during three and half days using sparser training data of 20-minute points. The same accuracy for the State-of-Charge prediction with the Long Short Term Memory network is achieved only for 14 h. Average standard deviations for the State-of-Charge prediction of 1.1% with the Deep Operator Network and 1.5% with the Long Short Term Memory network are obtained for a four-day prediction time using a denser training data of 5-minute points.

DeepONet↗

Digital image analysis to quantify carbide networks in ultrahigh carbon steels

A method has been developed and demonstrated to quantify the degree of carbide network connectivity in ultrahigh carbon steels through digital image processing and analysis of experimental micrographs. It was shown that the network connectivity and carbon content can be correlated to toughness for various ultrahigh carbon steel specimens. The image analysis approach first involved segmenting the carbide network and pearlite matrix into binary contrast representations via a grayscale intensity thresholding operation. Next, the carbide network pixels were skeletonized and parceled into braches and nodes, allowing the determination of a connectivity index for the carbide network. Intermediate image processing steps to remove noise and fill voids in the network are also detailed. The connectivity indexes of scanning electron micrographs were consistent in both secondary and backscattered electron imaging modes, as well as across two different (50 × and 100 ×) magnifications. Results from ultrahigh carbon steels reported here along with other results from the literature generally showed lower connectivity indexes correlated with higher Charpy impact energy (toughness). A deviation from this trend was observed at higher connectivity indexes, consistent with a percolation threshold for crack propagation across the carbide network. - Highlights: • A method for carbide network analysis in steels is proposed and demonstrated. • ImageJ method extracts a network connectivity index from micrographs. • Connectivity index consistent in different imaging conditions and magnifications. • Impact energy may plateau when a critical network connectivity is exceeded.

36 MATERIALS SCIENCE↗

On the synthesis and structure of resorcinol-formaldehyde polymeric networks – Precursors to 3D-carbon macroassemblies

With the new impetus towards the development of hierarchical graphene and CNT macro-assemblies for application in fields such as advanced energy storage, catalysis and electronics; there is much renewed interest in organic carbon-based sol–gel processes as a synthetically convenient and versatile means of forming three dimensional, covalently bonded organic/inorganic networks. Such matrices can act as highly effective precursors, scaffolds or molecular ‘glues’ for the assembly of a wide variety of functional carbon macro-assemblies. However, despite the utility and broad use of organic sol–gel processes – such as the ubiquitous resorcinol-formaldehyde (RF) reaction, there are details of the reaction chemistries of these important sol–gel processes that remain poorly understood at present. It is therefore both timely and necessary to examine these reactions in more detail using modern analytical techniques in order to gain a more rigorous understanding of the mechanisms by which these organic networks form. The goal of such studies is to obtain improved and rational control over the organic network structure, in order to better direct and tailor the architecture of the final inorganic carbon matrix. In this study we have investigated in detail, the mechanism of the organic sol–gel network forming reaction of resorcinol and formaldehyde from a structural and kinetic standpoint, by using a combination of real-time high field solution state nuclear magnetic resonance (NMR), low field NMR relaxometry and differential scanning calorimetry (DSC). These investigations have allowed us to track the network formation processes in real-time, gain both detailed structural information on the mechanisms of the RF sol–gel process and a quantitative assessment of the kinetics of the global network formation process. Here, it has been shown that the mechanism, by which the RF organic network forms, proceeds via an initial exothermic step correlated to the formation of a free aromatic aldehyde. The network growth reaction then proceeds in a statistical manner following a first order Arrhenius type kinetic relationship – characteristic of a typical thermoset network poly-condensation process. Finally, despite the relative complexity and ill-defined nature of the formaldehyde staring material, the final network structure is to a large extent, governed by the substitution pattern of the resorcinol molecule.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Deep material network via a quilting strategy: visualization for explainability and recursive training for improved accuracy

Recent developments integrating micromechanics and neural networks offer promising paths for rapid predictions of the response of heterogeneous materials with similar accuracy as direct numerical simulations. The deep material network is one such approaches, featuring a multi-layer network and micromechanics building blocks trained on anisotropic linear elastic properties. Once trained, the network acts as a reduced-order model, which can extrapolate the material’s behavior to more general constitutive laws, including nonlinear behaviors, without the need to be retrained. However, current training methods initialize network parameters randomly, incurring inevitable training and calibration errors. Here, we introduce a way to visualize the network parameters as an analogous unit cell and use this visualization to “quilt” patches of shallower networks to initialize deeper networks for a recursive training strategy. The result is an improvement in the accuracy and calibration performance of the network and an intuitive visual representation of the network for better explainability.

97 MATHEMATICS AND COMPUTING↗

Tissue-specific extracellular matrix accelerates the formation of neural networks and communities in a neuron-glia co-culture on a multi-electrode array

Abstract The brain’s extracellular matrix (ECM) is a macromolecular network composed of glycosaminoglycans, proteoglycans, glycoproteins, and fibrous proteins. In vitro studies often use purified ECM proteins for cell culture coatings, however these may not represent the molecular complexity and heterogeneity of the brain’s ECM. To address this, we compared neural network activity (over 30 days in vitro ) from primary neurons co-cultured with glia grown on ECM coatings from decellularized brain tissue (bECM) or MaxGel, a non-tissue-specific ECM. Cells were grown on a multi-electrode array (MEA) to enable noninvasive long-term interrogation of neuronal networks. In general, the presence of ECM accelerated the formation of networks without affecting the inherent network properties. However, specific features of network activity were dependent on the type of ECM: bECM enhanced network activity over a greater region of the MEA whereas MaxGel increased network burst rate associated with robust synaptophysin expression. These differences in network activity were not attributable to cellular composition, glial proliferation, or astrocyte phenotypes, which remained constant across experimental conditions. Collectively, the addition of ECM to neuronal cultures represents a reliable method to accelerate the development of mature neuronal networks, providing a means to enhance throughput for routine evaluation of neurotoxins and novel therapeutics.

59 BASIC BIOLOGICAL SCIENCES↗

Pan- and core- network analysis of co-expression genes in a model plant

Genome-wide gene expression experiments have been performed using the model plant Arabidopsis during the last decade. Some studies involved construction of coexpression networks, a popular technique used to identify groups of co-regulated genes, to infer unknown gene functions. One approach is to construct a single coexpression network by combining multiple expression datasets generated in different labs. We advocate a complementary approach in which we construct a large collection of 134 coexpression networks based on expression datasets reported in individual publications. To this end we reanalyzed public expression data. To describe this collection of networks we introduced concepts of ‘pan-network’ and ‘core-network’ representing union and intersection between a sizeable fractions of individual networks, respectively. Here, we showed that these two types of networks are different both in terms of their topology and biological function of interacting genes. For example, the modules of the pan-network are enriched in regulatory and signaling functions, while the modules of the core-network tend to include components of large macromolecular complexes such as ribosomes and photosynthetic machinery. Our analysis is aimed to help the plant research community to better explore the information contained within the existing vast collection of gene expression data in Arabidopsis.

60 APPLIED LIFE SCIENCES↗

Cross-linked structure of network evolution

We study the temporal co-variation of network co-evolution via the cross-link structure of networks, for which we take advantage of the formalism of hypergraphs to map cross-link structures back to network nodes. We investigate two sets of temporal network data in detail. In a network of coupled nonlinear oscillators, hyperedges that consist of network edges with temporally co-varying weights uncover the driving co-evolution patterns of edge weight dynamics both within and between oscillator communities. In the human brain, networks that represent temporal changes in brain activity during learning exhibit early co-evolution that then settles down with practice. Subsequent decreases in hyperedge size are consistent with emergence of an autonomous subgraph whose dynamics no longer depends on other parts of the network. Our results on real and synthetic networks give a poignant demonstration of the ability of cross-link structure to uncover unexpected co-evolution attributes in both real and synthetic dynamical systems. This, in turn, illustrates the utility of analyzing cross-links for investigating the structure of temporal networks.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

A Gaussian graphical model approach to climate networks

Distinguishing between direct and indirect connections is essential when interpreting network structures in terms of dynamical interactions and stability. When constructing networks from climate data the nodes are usually defined on a spatial grid. The edges are usually derived from a bivariate dependency measure, such as Pearson correlation coefficients or mutual information. Thus, the edges indistinguishably represent direct and indirect dependencies. Interpreting climate data fields as realizations of Gaussian Random Fields (GRFs), we have constructed networks according to the Gaussian Graphical Model (GGM) approach. In contrast to the widely used method, the edges of GGM networks are based on partial correlations denoting direct dependencies. Furthermore, GRFs can be represented not only on points in space, but also by expansion coefficients of orthogonal basis functions, such as spherical harmonics. This leads to a modified definition of network nodes and edges in spectral space, which is motivated from an atmospheric dynamics perspective. We construct and analyze networks from climate data in grid point space as well as in spectral space, and derive the edges from both Pearson and partial correlations. Network characteristics, such as mean degree, average shortest path length, and clustering coefficient, reveal that the networks posses an ordered and strongly locally interconnected structure rather than small-world properties. Despite this, the network structures differ strongly depending on the construction method. Straightforward approaches to infer networks from climate data while not regarding any physical processes may contain too strong simplifications to describe the dynamics of the climate system appropriately.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

The behaviour of basic autocatalytic signalling modules in isolation and embedded in networks

In this paper, we examine the behaviour of basic autocatalytic feedback modules involving a species catalyzing its own production, either directly or indirectly. We first perform a systematic study of the autocatalytic feedback module in isolation, examining the effect of different factors, showing how this module is capable of exhibiting monostable threshold and bistable switch-like behaviour. We then study the behaviour of this module embedded in different kinds of basic networks including (essentially) irreversible cycles, open and closed reversible chains, and networks with additional feedback. We study the behaviour of the networks deterministically and also stochastically, using simulations, analytical work, and bifurcation analysis. We find that (i) there are significant differences between the behaviour of this module in isolation and in a network: thresholds may be altered or destroyed and bistability may be destroyed or even induced, even when the ambient network is simple. The global characteristics and topology of this network and the position of the module in the ambient network can play important and unexpected roles. (ii) There can be important differences between the deterministic and stochastic dynamics of the module embedded in networks, which may be accentuated by the ambient network. This provides new insights into the functioning of such enzymatic modules individually and as part of networks, with relevance to other enzymatic signalling modules as well.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗