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At least 685 records · Page 38

Citizen Science Twitter Data Management for Earth Science Applications

Social media data can provide useful real-time and historical information relating to the natural world, but managing this data poses challenges. Scientists at GES DISC are exploring the potential of Twitter data to augment precipitation data from the Global Precipitation Measurement (GPM) mission. However, the format of Twitter data is unconventional in the context of NASA data centers, resulting in frustration for scientists who need to work with the data. This study investigated procedures and standards needed to properly manage Twitter data to make them compatible with these data centers. After comparing databases, the study found that the MongoDB database was best suited for the storage of raw Twitter data due to its flexibility, ability to be accessed by multiple users, and querying functionality. The study used the Python package Zarr to transform processed Twitter data into a gridded format similar to that of satellite data. Each Tweet was mapped onto a time-space grid; each grid location contained information about Tweet attributes and precipitation. The study developed a pipeline for downloading, storing, and gridding Twitter data and transformed Twitter data into an understandable format for users of NASA satellite data.

Li, Rachel↗

redMaGiC: Selecting luminous red galaxies from the DES Science Verification data

Here, we introduce redMaGiC, an automated algorithm for selecting luminous red galaxies (LRGs). The algorithm was specifically developed to minimize photometric redshift uncertainties in photometric large-scale structure studies. redMaGiC achieves this by self-training the colour cuts necessary to produce a luminosity-thresholded LRG sample of constant comoving density. We demonstrate that redMaGiC photo-zs are very nearly as accurate as the best machine learning-based methods, yet they require minimal spectroscopic training, do not suffer from extrapolation biases, and are very nearly Gaussian. We apply our algorithm to Dark Energy Survey (DES) Science Verification (SV) data to produce a redMaGiC catalogue sampling the redshift range z ϵ [0.2, 0.8]. Our fiducial sample has a comoving space density of 10 –3 (h –1 Mpc) –3 , and a median photo-z bias (zspec – zphoto) and scatter (σz/(1 + z)) of 0.005 and 0.017, respectively. The corresponding 5σ outlier fraction is 1.4 per cent. We also test our algorithm with Sloan Digital Sky Survey Data Release 8 and Stripe 82 data, and discuss how spectroscopic training can be used to control photo-z biases at the 0.1 per cent level.

79 ASTRONOMY AND ASTROPHYSICS↗

NASA Remote Sensing Data in Earth Sciences: Processing, Archiving, Distribution, Applications at the GES DISC

The NASA Goddard Earth Sciences Data and Information Services Center (GES DISC) is one of the major Distributed Active Archive Centers (DAACs) archiving and distributing remote sensing data from the NASA's Earth Observing System. In addition to providing just data, the GES DISC/DAAC has developed various value-adding processing services. A particularly useful service is data processing a t the DISC (i.e., close to the input data) with the users' algorithms. This can take a number of different forms: as a configuration-managed algorithm within the main processing stream; as a stand-alone program next to the on-line data storage; as build-it-yourself code within the Near-Archive Data Mining (NADM) system; or as an on-the-fly analysis with simple algorithms embedded into the web-based tools (to avoid downloading unnecessary all the data). The existing data management infrastructure at the GES DISC supports a wide spectrum of options: from data subsetting data spatially and/or by parameter to sophisticated on-line analysis tools, producing economies of scale and rapid time-to-deploy. Shifting processing and data management burden from users to the GES DISC, allows scientists to concentrate on science, while the GES DISC handles the data management and data processing at a lower cost. Several examples of successful partnerships with scientists in the area of data processing and mining are presented.

Leptoukh, Gregory G.↗

Data systems and computer science space data systems: Onboard memory and storage

The topics are presented in viewgraph form and include the following: technical objectives; technology challenges; state-of-the-art assessment; mass storage comparison; SODR drive and system concepts; program description; vertical Bloch line (VBL) device concept; relationship to external programs; and backup charts for memory and storage.

Shull, Tom↗

NASA Earthdata Forums: An Interactive Venue for Discussions of NASA Data and Earth Science

We demonstrate how students and teachers can register to use the NASA Earthdata Forums. The NASA Earthdata forums provide a venue where registered users can pose questions regarding NASA Earth science data in a moderated forum, and have their questions answered by data experts and scientific subject matter experts connected with NASA Earth science missions and projects. Since the forums are also available for research scientists to pose questions and discuss pertinent topics, the NASA Earthdata Forums provide a unique opportunity for students and teachers to gain insight from expert scientists and enhance their knowledge of the many different ways that NASA Earth observations can be used in research and applications.

user foru↗

Balancing Open Science and Data Privacy in the Water Sciences

Open science practices such as publishing data and code are transforming water science by enabling synthesis and enhancing reproducibility. However, as research increasingly bridges the physical and social science domains (e.g., socio-hydrology), there is the potential for well-meaning researchers to unintentionally violate the privacy and security of individuals or communities by sharing sensitive information. Here we identify the contexts in which privacy violations are most likely to occur, such as working with high-resolution spatial data (e.g., from remote sensing), consumer data (e.g., from smart meters), and/or digital trace data (e.g., from social media). We also suggest practices for identifying and addressing privacy concerns at the individual, institutional, and disciplinary levels. We strongly advocate that the water science community continue moving toward open science and socio-environmental research and that progress toward these goals be rooted in open and ethical data management.

96 KNOWLEDGE MANAGEMENT AND PRESERVATION↗

OBSERVATION AND CONFIRMATION OF SIX STRONG-LENSING SYSTEMS IN THE DARK ENERGY SURVEY SCIENCE VERIFICATION DATA

We report the observation and confirmation of the first group- and cluster-scale strong gravitational lensing systems found in Dark Energy Survey data. Through visual inspection of data from the Science Verification season, we identified 53 candidate systems. We then obtained spectroscopic follow-up of 21 candidates using the Gemini Multi-object Spectrograph at the Gemini South telescope and the Inamori-Magellan Areal Camera and Spectrograph at the Magellan/Baade telescope. With this follow-up, we confirmed six candidates as gravitational lenses: three of the systems are newly discovered, and the remaining three were previously known. Of the 21 observed candidates, the remaining 15 either were not detected in spectroscopic observations, were observed and did not exhibit continuum emission (or spectral features), or were ruled out as lensing systems. The confirmed sample consists of one group-scale and five galaxy-cluster-scale lenses. The lensed sources range in redshift z ∼ 0.80–3.2 and in i -band surface brightness i {sub SB} ∼ 23–25 mag arcsec{sup −2} (2″ aperture). For each of the six systems, we estimate the Einstein radius θ {sub E} and the enclosed mass M {sub enc}, which have ranges θ {sub E} ∼ 5″–9″ and M {sub enc} ∼ 8 × 10{sup 12} to 6 × 10{sup 13} M {sub ⊙}, respectively.

79 ASTRONOMY AND ASTROPHYSICS↗

Weak Lensing Analysis of SPT selected Galaxy Clusters using Dark Energy Survey Science Verification Data

We present weak-lensing (WL) mass constraints for a sample of massive galaxy clusters detected by the South Pole Telescope (SPT) via the Sunyaev-Zel'dovich effect (SZE). We use griz imaging data obtained from the Science Verification (SV) phase of the Dark Energy Survey (DES) to fit the WL shear signal of 33 clusters in the redshift range 0.25 <= z <= 0.8 with NFW profiles and to constrain a four-parameter SPT mass-observable relation. To account for biases in WL masses, we introduce a WL mass to true mass scaling relation described by a mean bias and an intrinsic, lognormal scatter. We allow for correlated scatter within the WL and SZE mass-observable relations and use simulations to constrain priors on nuisance parameters related to bias and scatter from WL. We constrain the normalization of the zeta-M-500 relation, A(SZ) = 12.0(-6.7)(+2.6) when using a prior on the mass slope B-SZ from the latest SPT cluster cosmology analysis. Without this prior, we recover A(SZ) = 10.8(-5.2)(+2.3) and B-SZ = 1.30(-0.44)(+0.22). Results in both cases imply lower cluster masses than measured in previous work with and without WL, although the uncertainties are large. The WL derived value of B-SZ is approximate to 20 per cent lower than the value preferred by the most recent SPT cluster cosmology analysis. The method demonstrated in this work is designed to constrain cluster masses and cosmological parameters simultaneously and will form the basis for subsequent studies that employ the full SPT cluster sample together with the DES data.

cosmology: observations↗

Cross-correlation of gravitational lensing from DES Science Verification data with SPT and Planck lensing

We measure the cross-correlation between weak lensing of galaxy images and of the cosmic microwave background (CMB). The effects of gravitational lensing on different sources will be correlated if the lensing is caused by the same mass fluctuations. We use galaxy shape measurements from 139 deg(2) of the Dark Energy Survey (DES) Science Verification data and overlapping CMB lensing from the South Pole Telescope (SPT) and Planck. The DES source galaxies have a median redshift of z(med) similar to 0.7, while the CMB lensing kernel is broad and peaks at z similar to 2. The resulting cross-correlation is maximally sensitive to mass fluctuations at z similar to 0.44. Assuming the Planck 2015 best-fitting cosmology, the amplitude of the DESxSPT cross-power is found to be A(SPT) = 0.88 +/- 0.30 and that from DESxPlanck to be A(Planck) = 0.86 +/- 0.39, where A = 1 corresponds to the theoretical prediction. These are consistent with the expected signal and correspond to significances of 2.9 sigma and 2.2 sigma, respectively. We demonstrate that our results are robust to a number of important systematic effects including the shear measurement method, estimator choice, photo-z uncertainty and CMB lensing systematics. We calculate a value of A = 1.08 +/- 0.36 for DESxSPT when we correct the observations with a simple intrinsic alignment model. With three measurements of this cross-correlation now existing in the literature, there is not yet reliable evidence for any deviation from the expected LCDM level of cross-correlation. We provide forecasts for the expected signal-to-noise ratio of the combination of the five-year DES survey and SPT-3G.

Kirk, D.↗

Mapping and simulating systematics due to spatially-varying observing conditions in DES science verification data

Spatially-varying depth and characteristics of observing conditions, such as seeing, airmass, or sky background, are major sources of systematic uncertainties in modern galaxy survey analyses, in particular in deep multi-epoch surveys. We present a framework to extract and project these sources of systematics onto the sky, and apply it to the Dark Energy Survey (DES) to map the observing conditions of the Science Verification (SV) data. The resulting distributions and maps of sources of systematics are used in several analyses of DES SV to perform detailed null tests with the data, and also to incorporate systematics in survey simulations. We illustrate the complementarity of these two approaches by comparing the SV data with the BCC-UFig, a synthetic sky catalogue generated by forward-modelling of the DES SV images. We then analyse the BCC-UFig simulation to construct galaxy samples mimicking those used in SV galaxy clustering studies. We show that the spatially-varying survey depth imprinted in the observed galaxy densities and the redshift distributions of the SV data are successfully reproduced by the simulation and well-captured by the maps of observing conditions. The combined use of the maps, the SV data and the BCC-UFig simulation allows us to quantify the impact of spatial systematics on N(z), the redshift distributions inferred using photometric redshifts. We conclude that spatial systematics in the SV data are mainly due to seeing fluctuations and are under control in current clustering and weak lensing analyses. However, they will need to be carefully characterised in upcoming phases of DES in order to avoid biasing the inferred cosmological results. The framework presented is relevant to all multi-epoch surveys, and will be essential for exploiting future surveys such as the Large Synoptic Survey Telescope, which will require detailed null-tests and realistic end-to-end image simulations to correctly interpret the deep, high-cadence observations of the sky.

79 ASTRONOMY AND ASTROPHYSICS↗

Galaxy bias from the Dark Energy Survey Science Verification data: Combining galaxy density maps and weak lensing maps

We measure the redshift evolution of galaxy bias for a magnitude-limited galaxy sample by combining the galaxy density maps and weak lensing shear maps for a ~116 deg 2 area of the Dark Energy Survey (DES) Science Verification (SV) data. This method was first developed in Amara et al. and later re-examined in a companion paper with rigorous simulation tests and analytical treatment of tomographic measurements. In this work we apply this method to the DES SV data and measure the galaxy bias for a i < 22.5 galaxy sample. We find the galaxy bias and 1σ error bars in four photometric redshift bins to be 1.12 ± 0.19 (z = 0.2–0.4), 0.97 ± 0.15 (z = 0.4–0.6), 1.38 ± 0.39 (z = 0.6–0.8), and 1.45 ± 0.56 (z = 0.8–1.0). These measurements are consistent at the 2σ level with measurements on the same data set using galaxy clustering and cross-correlation of galaxies with cosmic microwave background lensing, with most of the redshift bins consistent within the 1σ error bars. In addition, our method provides the only σ8 independent constraint among the three. We forward model the main observational effects using mock galaxy catalogues by including shape noise, photo-z errors, and masking effects. We show that our bias measurement from the data is consistent with that expected from simulations. With the forthcoming full DES data set, we expect this method to provide additional constraints on the galaxy bias measurement from more traditional methods. Moreover, in the process of our measurement, we build up a 3D mass map that allows further exploration of the dark matter distribution and its relation to galaxy evolution.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Data for NB6 HBRR Science Design ORNL/TM-2025/3807

Data for the report (ORNL/TM-2025/3807) that describes the calculations and the Monte Carlo Ray Tracing simulations performed using the McStas package to determine the coatings and geometry for the NB-6 guide. It provides the information to inform the mechanical design, validation tests and verification that it meets the science requirements.

47 OTHER INSTRUMENTATION↗

Data Science-Driven Analysis of Substrate-Permissive Diketopiperazine Reverse Prenyltransferase NotF: Applications in Protein Engineering and Cascade Biocatalytic Synthesis of (-)-Eurotiumin A

Prenyltransfer is an early-stage carbon-hydrogen bond (C-H) functionalization prevalent in the biosynthesis of a diverse array of biologically active bacterial, fungal, plant, and metazoan diketopiperazine (DKP) alkaloids. Toward the development of a unified strategy for biocatalytic construction of prenylated DKP indole alkaloids, we sought to identify and characterize a substrate-permissive C2 reverse prenyltransferase (PT). As the first tailoring event within the biosynthesis of cytotoxic notoamide metabolites, PT NotF catalyzes C2 reverse prenyltransfer of brevianamide F. Solving a crystal structure of NotF (in complex with native substrate and prenyl donor mimic dimethylallyl S-thiolodiphosphate (DMSPP)) revealed a large, solvent-exposed active site, intimating NotF may possess a significantly broad substrate scope. To assess the substrate selectivity of NotF, we synthesized a panel of 30 sterically and electronically differentiated tryptophanyl DKPs, the majority of which were selectively prenylated by NotF in synthetically useful conversions (2 to > 99%). Quantitative representation of this substrate library and development of a descriptive statistical model provided insight into the molecular origins of NotF's substrate promiscuity. This approach enabled the identification of key substrate descriptors (electrophilicity, size, and flexibility) that govern the rate of NotF-catalyzed prenyltransfer, and the development of an "induced fit docking (IFD)-guided" engineering strategy for improved turnover of our largest substrates. We further demonstrated the utility of NotF in tandem with oxidative cyclization using flavin monooxygenase, BvnB. This one-pot, in vitro biocatalytic cascade enabled the first chemoenzymatic synthesis of the marine fungal natural product, (-)-eurotiumin A, in three steps and 60% overall yield.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

SMAP Science and Application Results

Science and application results appearing in peer-reviewed journal papers in 2021 are highlighted in this paper. With over six years of science data acquisition, science data products of the NASA Soil Moisture Active Passive (SMAP)satellite project are now being applied in diverse subdisciplines in Earth System science. In 2021, there were close to two-hundred papers appearing in peer-reviewed disciplinary journals. In this paper we highlight a few of the research and applications findings that were reported in the calendar year.

Dara Entekhabi↗

Health intelligence: how artificial intelligence transforms population and personalized health

Advances in computational and data sciences for data management, integration, mining, classification, filtering, visualization along with engineering innovations in medical devices have prompted demands for more comprehensive and coherent strategies to address the most fundamental questions in health care and medicine. Theory, methods, and models from artificial intelligence (AI) are changing the health care landscape in clinical and community settings and have already shown promising results in multiple applications in healthcare including, integrated health information systems, patient education, geocoding health data, social media analytics, epidemic and syndromic surveillance, predictive modeling and decision support, mobile health, and medical imaging (e.g. radiology and retinal image analyses). Health intelligence uses tools and methods from artificial intelligence and data science to provide better insights, reduce waste and wait time, and increase speed, service efficiencies, level of accuracy, and productivity in health care and medicine.

Shaban-Nejad, Arash↗