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At least 667 records · Page 37
All sourcesNASA NTRSDOE OSTI
DOE OSTI2014

Methane production from protozoan endosymbionts following stimulation of microbial metabolism within subsurface sediments

Previous studies have suggested that protozoa prey on Fe(III)- and sulfate-reducing bacteria that are enriched when acetate is added to uranium contaminated subsurface sediments to stimulate U(VI) reduction. In order to determine whether protozoa continue to impact subsurface biogeochemistry after these acetate amendments have stopped, 18S rRNA and ß-tubulin sequences from this phase of an in situ uranium bioremediation field experiment were analyzed. Sequences most similar to Metopus species predominated, with the majority of sequences most closely related to M. palaeformis, a cilitated protozoan known to harbor methanogenic symbionts. Quantification of mcrA mRNA transcripts in the groundwater suggested that methanogens closely related to Metopus endosymbionts were metabolically active at this time. There was a strong correlation between the number of mcrA transcripts from the putative endosymbiotic methanogen and Metopus ß-tubulin mRNA transcripts during the course of the field experiment, suggesting that the activity of the methanogens was dependent upon the activity of the Metopus species. Addition of the eukaryotic inhibitors cyclohexamide and colchicine to laboratory incubations of acetate-amended subsurface sediments significantly inhibited methane production and there was a direct correlation between methane concentration and Metopus ß-tubulin and putative symbiont mcrA gene copies. These results suggest that, following the stimulation of subsurface microbial growth with acetate, protozoa harboring methanogenic endosymbionts become important members of the microbial community, feeding on moribund biomass and producing methane.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2020

Arsenolipids in Cultured Picocystis Strain ML and Their Occurrence in Biota and Sediment from Mono Lake, California

Primary production in Mono Lake, a hypersaline soda lake rich in dissolved inorganic arsenic, is dominated by Picocystis strain ML. We set out to determine if this photoautotrophic picoplankter could metabolize inorganic arsenic and in doing so form unusual arsenolipids (e.g., arsenic bound to 2-O-methyl ribosides) as reported in other saline ecosystems and by halophilic algae. We cultivated Picocystis strain ML on a seawater-based medium with either low (37 µM) or high (1000 µM) phosphate in the presence of arsenite (400 µM), arsenate (800 µM), or without arsenic additions (ca 0.025 µM). Cultivars formed a variety of organoarsenic compounds, including a phytyl 2-O-methyl arsenosugar, depending upon the cultivation conditions and arsenic exposure. When the cells were grown at low P, the organoarsenicals they produced when exposed to both arsenite and arsenate were primarily arsenolipids (~88%) with only a modest content of water-soluble organoarsenic compounds (e.g., arsenosugars). When grown at high P, sequestration shifted to primarily water-soluble, simple methylated arsenicals such as dimethylarsinate; arsenolipids still constituted ~32% of organoarsenic incorporated into cells exposed to arsenate but < 1% when exposed to arsenite. Curiously, Picocystis strain ML grown at low P and exposed to arsenate sequestered huge amounts of arsenic into the cells accounting for 13.3% of the dry biomass; cells grown at low P and arsenite exposure sequestered much lower amounts, equivalent to 0.35% of dry biomass. Extraction of a resistant phase with trifluoroacetate recovered most of the sequestered arsenic in the form of arsenate. Uptake of arsenate into low P-cultivated cells was confirmed by X-ray fluorescence, while XANES/EXAFS spectra indicated the sequestered arsenic was retained as an inorganic iron precipitate, similar to scorodite, rather than as an As-containing macromolecule. Samples from Mono Lake demonstrated the presence of a wide variety of organoarsenic compounds, including arsenosugar phospholipids, most prevalent in zooplankton (Artemia) and phytoplankton samples, with much lower amounts detected in the bottom sediments. These observations suggest a trophic transfer of organoarsenicals from the phytoplankton (Picocystis) to the zooplankton (Artemia) community, with efficient bacterial mineralization of any lysis-released organoarsenicals back to inorganic oxyanions before they sink to the sediments.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2019

Governing Constraints of Chromium(VI) Formation from Chromium(III)-Bearing Minerals in Soils and Sediments

The potential for geogenic Cr(VI) contamination is vast, yet it is difficult to predict susceptible environments as groundwater Cr(VI) concentrations vary significantly, even within a given aquifer, due to physical and hydrologic heterogeneity. The physical structure of soils and sediments exerts a dominant control on Cr(VI) production by dictating the separation distance of reactive phases, the diffusion distance from Cr(VI) generation sites to advecting groundwater, and by influencing infiltration rates and porewater velocity. Here, we used a dual-pore domain model to investigate the relative control of these parameters on Cr(VI) production. The reaction distance between Cr(III)-bearing minerals and Mn oxides predominantly controls Cr(VI) export to advecting groundwater, while changes in diffusion distance between sites of Cr(VI) generation and advective flow channels generally have little impact on steady-state Cr(VI) concentrations. Changes in Cr(VI) diffusion distance can, however, increase the time required for groundwater Cr(VI) concentrations to reach a steady-state; thus, under fluctuating hydrologic and biogeochemical conditions, long diffusion distances still have the potential to suppress Cr(VI) supply to advecting water. Furthermore, we show that high porewater flow velocities effectively dilute Cr(VI) diffusing from soil/sediment aggregates, thus minimizing Cr(VI) concentrations relative to lower porewater velocities. The strong control that the physical/hydrologic parameters exert on Cr(VI) production appears to overwhelm the impact of Cr(III)-mineral solubility within soils and sediments.

Hausladen, Debra (ORCID:0000000342356294)↗
DOE OSTI2021

Sensitivity of Riparian Buffer Designs to Climate Change—Nutrient and Sediment Loading to Streams: A Case Study in the Albemarle-Pamlico River Basins (USA) Using HAWQS

Riparian buffer zones (RBZs) provide multiple benefits to watershed ecosystems. We aimed to conduct an extensive sensitivity analysis of the RBZ designs to climate change nutrient and sediment loadings to streams. We designed 135 simulation scenarios starting with the six baselines RBZs (grass, urban, two-zone forest, three-zone forest, wildlife, and naturalized) in three 12-digit Hydrologic Unit Code watersheds within the Albemarle-Pamlico river basin (USA). Using the hydrologic and water quality system (HAWQS), we assessed the sensitivity of the designs to five water quality indicator (WQI) parameters: dissolved oxygen (DO), total phosphorous (TP), total nitrogen (TN), sediment (SD), and biochemical oxygen demand (BD). To understand the climate mitigation potential of RBZs, we identified a subset of future climate change projection models of air temperature and precipitation using EPA’s Locating and Selecting Scenarios Online tool. Analyses revealed optimal RBZ designs for the three watersheds. In terms of watershed ecosystem services sustainability, the optimal Urban RBZ in contemporary climate (1983–2018) reduced SD from 61–96%, TN from 34–55%, TP from 9–48%, and BD from 53–99%, and raised DO from 4–10% with respect to No-RBZ in the three watersheds. The late century’s (2070–2099) extreme mean annual climate changes significantly increased the projected SD and BD; however, the addition of urban RBZs was projected to offset the climate change reducing SD from 28–94% and BD from 69–93% in the watersheds. All other types of RBZs are also projected to fully mitigate the climate change impacts on WQI parameters except three-zone RBZ.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2014

Genome sequence of the Wenxinia marina type strain (DSM 24838 T ), a representative of the Roseobacter group isolated from oilfield sediments

Wenxinia marina Ying et al. 2007 is the type species of the genus Wenxinia, a representative of the Roseobacter group within the alphaproteobacterial family Rhodobacteraceae, isolated from oilfield sediments of the South China Sea. This family was shown to harbor the most abundant bacteria especially from coastal and polar waters, but was also found in microbial mats, sediments and attached to different kind of surfaces. Here we describe the features of W. marina strain HY34 T together with the genome sequence and annotation of strain DSM 24838 T and novel aspects of its phenotype. The 4,181,754 bp containing genome sequence encodes 4,047 protein-coding genes and 59 RNA genes. The genome of W. marina DSM 24838 T was sequenced as part of the activities of the Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG) project funded by the DoE and the Transregional Collaborative Research Centre 51 (TRR51) funded by the German Research Foundation (DFG).

59 BASIC BIOLOGICAL SCIENCES↗
NASA NTRS1973

Dynamics of suspended sediment in Lake Ontario

The author has identified the following significant results. The suspended sediment plumes generated by the Welland Canal and the Genesee River are identifiable in most band 5 frames received from ERTS-1. In descending order of value for plume detection in Lake Ontario are bands 4, 6, and 7. Little or no information content relative to plume detection is available in band 7. The Oswego River plume was not visible during low flow periods; however, it was identifiable immediately following storms. Increased suspended sediment loading emanating from storm runoff increases turbidity levels to the point where the plume becomes visible in the ERTS-1 imagery. Despite the fact that it is detectable from high altitude (60,000 feet) photography, the Niagara River plume was not visible in any of the ERTS-1 frames. Numerous examples of shoreline erosion were evident in the December 7, 1972, imagery of western Lake Ontario. Near shore lake circulation patterns are usually apparent whenever turbidity plumes are sensed by the satellite.

Pluhowski, E. J.↗
NASA NTRS1972

Remote sensing study of land use and sedimentation in the Ross Barnett Reservoir, Jackson, Mississippi area

This multi-year study is aimed at focusing on the recognition of sediment and other affluents in a selected area of the Ross Barnett Reservoir. The principle objectives are the determination of land use types, effect of land use on erosion, and the correlation of sediment with land use in the area. The I2S multi-band imagery was employed in conjunction with ground truth data for both water and land use studies. The selected test site contains approximately forty square miles including forest, open land, and water in addition to residential and recreational areas.

Mealor, W. T., Jr.↗
NASA NTRS1973

Studies of the inner shelf and coastal sedimentation environment of the Beaufort Sea from ERTS-1

The author has identified the following significant results. Northward flowing rivers of Alaska inundate extensive areas of sea ice during spring breakup. This process has been studied under the ERTS-1 program. Drainage of large volumes of fresh water through the ice at holes and cracks (strudel) causes scour depressions, over 4 m deep, and up to 20 m across in the sea floor below. Strudel scours occur within 30 km of river mouths, generally in areas where ERTS-1 imagery shows less potential for drifting ice to scour the bottom than elsewhere. The shapes and distribution patterns of strudel scours correspond with those of strudel seen in the ice canopy. Densities of scours are highest in the inner areas of overlfow. But strudel scours also occur outside of overflow areas mapped during the last several years. These must be very old. One strudel scour investigated by diving is surrounded by a rim, has vertical walls exposing a tundra horizon, and terminates at a gravel layer 4 m below the lagoon floor. Another terminates at a semi-consolidated layer of silty clay. The gravel and silty clay are pre-Holocene deposits. Mixing of Holocene marine with older sediments by vertical strudel flow causes great variability in sediment types over small areas. These observations complicate interpretation of shallow water deposits of cold climates.

Reimnitz, E.↗
NASA NTRS1973

Digital analysis of Potomac River Basin ERTS imagery: Sedimentation levels at the Potomac-Anacostia confluence and strip mining in Allegheny County, Maryland

Two simple algorithms for classification of sedimentation levels in water and for delineation of active strip mines are in use as part of the development of a more general resource management information system. ERTS MSS CCT's are processed so that each pixel in each channel is geographically referenced and can be accessed individually during whole frame, multi-channel analysis or partial frame analysis. The sedimentation analysis clearly separates classes representing the turbid Anacostia water, the less disturbed Potomac (really), and mud flats resulting from effluent of a major sewage treatment plant. Mud flats of organic or mineral origin are easily distinguished.

Schubert, J. S.↗
NASA NTRS1973

Suspended sediment observations from ERTS-1.

Satellite imagery from four successful ERTS-1 passes over Delaware Bay during different portions of the tidal cycle are interpreted with special emphasis on visibility of suspended sediment and its use as a natural tracer for gross circulation patterns. The MSS red band (band 5) appears to give the best contrast, although the sediment patterns are represented by only a few neighboring shades of grey. Color density slicing improves the differentiation of turbidity levels. However, color additive enhancements are of limited value since most of the information is in a single color band. The ability of ERTS-1 to present a synoptic view of the surface circulation over the entire bay is shown to be a valuable and unique contribution of ERTS-1 to coastal oceanography.

Klemas, V.↗
NASA NTRS1973

Nature and changes in organic matter in organic sediments

A series of isoprenoid compounds were isolated from a heat treated marine sediment (from Tanner Basin) which were not present in the original sediment. Among the compounds identified were: phytol, dihydrophytol, C-18-isoprenoid ketone, phytanic and pristanic acids, C-19- and C-10-monoolefines, and the alkanes pristane and phytane. The significance and possible routes leading to these compounds is discussed.

Kaplan, I. R.↗
NASA NTRS1974

Dynamic behaviour of coastal sedimentation in the Lions Gulf

The author has identified the following significant results. A number of ERTS-1 images covering this geographical zone were studied and compared with cartographic maps, air photographs, and thermal-IR images. Old and recent sediments leave traces in the landscape which are decoded by interpreting the shapes of the clear zones forming a network against the black background representing water and humid zones. Current sedimentation and its mechanism were investigated. It had been hoped that a regular sequence of images would make it possible to follow the dynamics of the Rhone and the coastal rivers in relation to meteorological conditions. In any event only a small number of images spread over a wide period of time were obtained, and a complete study was therefore impossible. However, in comparing some of the ERTS-1 images certain thermal-IR images and information on the flow of the Rhone provided some clarification of mechanisms associated with river dynamics.

Guy, M.↗
NASA NTRS1974

Sediment concentration mapping in tidal estuaries

An analytical procedure has been developed that considers the ERTS-1 multispectral scanner as a reflectance spectrophotometer. ADP techniques requiring only very limited computer capability are utilized to search the data defining the spectral reflectance characteristics of a scene on a pixel-by-pixel basis, identify each pixel whose spectral reflectance matches a reference spectrum, and generate maps that identify pixel locations where spectrum matches occur and identify the spectrum that was matched. If the reference spectra are known to represent a specific condition on the ground, a map of the distribution of that condition can be output as a dimensionally accurate overlay to maps of any selected scale. Two applications are described: (1) mapping the distribution of water masses exhibiting specific suspended sediment concentrations; and (2) determining the location and delineation of surface water bodies in the southeastern U. S. The techniques described are being successfully used to map the land area inundated by the 1973 spring flood in the Lower Mississippi River Valley, map sediment distributions in Lake Pontchartrain (in Louisiana) as a result of opening the Bonnet Carre Floodway during the spring flood, and inventory lakes and reservoirs.

Williamson, A. N.↗
NASA NTRS1974

Thermal alteration of organic matter in recent marine sediments. 2: Isoprenoids

A series of isoprenoid compounds were isolated from a heat treated marine sediment (from Tanner Basin) which were not present in the original sediment. Among the compounds identified were: phytol, dihydrophytol, c-18-isoprenoid ketone, phytanic and pristanic acids, c-19 and c-20-monoolefines, and the alkanes pristane and phytane. The significance and possible routes leading to these compounds is discussed.

Ikan, R.↗
NASA NTRS1974

Dynamics of suspended sediment plumes in Lake Ontario

The absence of turbidity plumes during the winter was well documented in an ususually successful sequence of images obtained February 10 - 12, 1974. Useful imagery of the south shore of Lake Ontario was obtained on 3 successive days at a time when sky cover over the area normally approaches complete coverage. Imagery of the Oswego, Genesee, and Niagara rivers failed to detect any plumes, however faint. Despite strong northwest winds on February 11 there was no indication of shoreline erosion generated by wave action. Frozen ground, snow cover, shoreline icing and minimal construction and farm activity without doubt reduces the probability of sediment movement in winter. Thunderstorm activity over the study area is very rare during the cold season so that the erosive energy of rainfall is greatly reduced. Moreover, a fairly high percentage of the winter precipitation is in the form of snow or sleet further reducing the impact of rainfall energy on sediment transport.

Pluhowski, E. J.↗
NASA NTRS1975

Analysis of organic matter in sediments and meteorites and paleochemical studies of extinct and contemporary life forms

The insoluble organic materials present in the algal mats at Laguna Mormona, Baja California were studied. A series of six identical sediments collected from Mono lake which were stored under different conditions was investigated to see if any changes are observed in the lipid distribution patterns as a result of differences in sample storage conditions. Bacteria strains from Mono Lake sediments were cultured in bulk quantities and the sterol fractions from them were isolated and analyzed. Results add further support to the utility of the sterols as a chemotaxonomical tool in distinguishing and classifying these bacteria.

Calvin, M.↗
NASA NTRS1975

Quantitative sediment mapping from remotely sensed multispectral data

Multiple regression techniques were used to correlate ERTS-1 data with measured values of suspended sediment. The resultant equation was applied to a different ERTS scene using a deepwater area for atmospheric calibration. This approach provides greater accuracy than previously reported methods. Suspended sediment contours are plotted for the Potomac River, Virginia, using Chesapeake Bay deep water for atmospheric calibration.

Johnson, R. W.↗
NASA NTRS1975

Evaluation of the dual differential radiometer for remote sensing of sediment and chlorophyll in turbid waters

The dual differential radiometer (DDR) was tested to determine its capability for measuring suspended sediment and chlorophyll in turbid waters. Measurements were obtained from a boat dock and from a helicopter with combinations of sample and reference filters with peak transmissions at various wavelengths. Water samples were taken concurrently and were analyzed for light scattering, particle count, and total chlorophyll. Least-squares estimates of the linear relationship between DDR output and the water parameters yielded correlation coefficients of less than 0.7. Under the turbid water conditions of the present tests, the DDR did not accurately measure either suspended sediment or chlorophyll. A precise knowledge of the spectral signatures of various pollutants might enable appropriate filters to be selected for tuning the DDR to monitor a particular pollutant.

Witte, W. G.↗