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All sourcesNASA NTRSDOE OSTI
DOE OSTI2017

Clean Energy Innovation Ecosystems Discovery - Measuring Innovation Through Data Analytics (MIDAS)

As part of the Mission Innovation rollout at the Paris COP 21, 20 countries announced to double their R&D budgets over 5 years to accelerate lab-to-market clean energy innovations. These innovations must address technical urgency and navigate complex institutional, social and financial environments. To inform budget and program development, policymakers need to understand existing clean energy innovation ecosystems (IE) and their characteristics at the local, state, and regional levels within the US. Researchers at ORNL have implemented a ground-breaking application of natural language processing, link analysis, and other computational techniques to transform text and numerical data into metrics on clean energy innovation activity and geography. The 'Measuring Innovation through Data Analytics' (MIDAS) application uses data to determine where clean energy innovation ecosystems exist and the underlying scoring algorithm "ranks" the strength of the ecosystem for several clean energy technologies. The selection of the data sources is driven by the fact that a clean energy IE can be identified as an intersection of nascent clean technology efforts and financing mechanisms and related large companies located in a geographically concentrated area with an enabling environment to encourage commercialization and networking assets to facilitate communication. MIDAS is a machine-assisted methodology that provides the user with a replicable method to rapidly identify, quantify and characterize clean energy innovation ecosystems. This software application and the underlying datasets have the potential to address many important policy questions. The initial broad list of U.S. clean energy ecosystems, with geographic area, technology focus, and list and types of involved organizations can help describe regional tech activities and capabilities. Other potential applications include understanding the effect of private sector investments on ecosystem activity, and trends analysis.

Chinthavali, Supriya↗
DOE OSTI2016

Evaluating Age Effects on HEPA Filter Performance

Nuclear grade high efficiency particulate air (HEPA) filters are routinely employed as the final control element in confinement ventilation systems. The traditional HEPA filter utilizes a pleated filter medium of fibrous glass that has been produced in a manner analogous to manufacturing paper. These filters are the physically weakest element in a containment ventilation system. Containment ventilation systems are designed to condition the air-stream (temperature, relative humidity, moisture, particle size distribution of aerosols, and aerosol concentration) to levels/conditions that fibrous glass HEPA filters can handle. Approximately 6000 nuclear grade HEPA filters are purchased each year for use in the DOE/NNSA complex. Additional filters are purchased for use in commercial nuclear power generation and ventilation systems of other nuclear applications. These filters are designed and tested in accordance with the American Society of Mechanical Engineers (ASME) AG-1 Code Nuclear Air and Gas Treatment. This code establishes design requirements and qualification procedures. Qualification testing of axial flow filters is described in paragraphs 5000 and following of AG-1. The series of qualification tests are intended to describe the operating envelope of HEPA filters and verify the reliability of a filter design. AG-1 qualification also confirms the pedigree of components used in manufacture for that filter design. The collective set of qualification tests establishes the assumed operating envelope for AG-1 filters. The effects of age on HEPA filter performance have been a concern for at least two decades. A combination of physical evaluation of aged filter media and a review of filter failure records resulted in Appendix C of the Nuclear Air Cleaning Handbook (NACH), Determination of HEPA Filter Life. This states that HEPA filters are not to be used beyond 10 years from the date of manufacture. Additionally, filters put into service in locations where they may become wet are to be taken out of service five years from date of manufacture. Filters that have become wet are to be taken out of service immediately. Finally, it should also be pointed out that filters held in Level B storage are subject to the same 10-year service life. Very limited bench-scale testing in the 1990's raised concern that aging HEPA filters do not have the strength to withstand an accident scenario. In May of 1999, the DNFSB released a Technical Report 23 entitled HEPA Filters Used in the Department of Energy's Hazardous Facilities. This report expressed concerns for the potential vulnerability of HEPA filters in vital safety systems. Concerns and uncertainty associated with degradation of HEPA filter performance over time led the DOE sites to limit HEPA filter service life to 10 years from the date of manufacture or five years in cases where filters may become wet. Establishment of a conservative service life needs to be based on data from a structured series of tests comparing the performance envelope of new and aged full-scale filters. A service life that is insufficiently conservative endangers workers and the public. One that is excessively conservative costs can cause hundreds of otherwise unnecessary filter changes. This increases exposure of employees, disrupts facility operations, and increase disposal costs by millions of dollars annually. Conclusive data are needed to resolve uncertainty associated with the damaging effects of aging on durability of HEPA filters. Therefore, this study needs to provide a sufficient body of evidence to allow DOE and site professionals to make prudent decisions. An updated version of ASME AG-1 Section FC included a non-mandatory appendix that would include the DOE guidance for service life of HEPA filters. Balloting of this revision generated significant resistance to inclusion of any kind of service life language citing the lack of supporting experimental data. Efforts to resolve negative votes failed and resistance to acceptance of the language increased. The result has been to not include service language in Section FC and requests to remove it from sections that already include such language. The recent activity of the ASME AG-1 Committee on Nuclear Air and Gas Treatment effectively de-emphasizes following DoE's service life guidelines. The DOE Office of Nuclear Safety under its NSR and D program provided the Mississippi State University Institute for Clean Energy Technology (ICET) finding to initiate a study to determine the effects of aging on AG-1 axial flow filters just prior to actions taken within the AG-1 committee regarding service life. The NSR and D funding facilitated timely development of a national technical working group comprised of members from the regulatory community, DOE complex, and commercial power to resolve uncertainty associated with effects of aging. The Department of Energy Office of Environmental Management (DOE-EM) has been funding the ICET to evaluate the performance envelope for AG-1 HEPA filters. ICET is one of DOE-EM's qualified suppliers. Synergy has been achieved by associating the NSR and D aged filter activities to testing activities evaluating the performance envelopes of separator and separator-less AG-1 HEPA filters funded by DOE-EM. The DOE-EM funded activities establish baseline data for the aged filter study and future EM funding will provide long term support for testing additional aged filters. EM funding of new filters includes analytical evaluation of media tensile strength by thermal analysis to establish baseline values and determine mass loss of moisture resistance and acrylic binders due to use. All of these values can be used for comparison of test results for aged filters. (authors)

07 ISOTOPE AND RADIATION SOURCES↗
DOE OSTI2025

Mojo: MLIR-based Performance-Portable HPC Science Kernels on GPUs for the Python Ecosystem

We explore the performance and portability of the novel Mojo language for scientific computing workloads on GPUs. As the first language based on the LLVM’s Multi-Level Intermediate Representation (MLIR) compiler infrastructure, Mojo aims to close performance and productivity gaps by combining Python’s interoperability and CUDA-like syntax for compile-time portable GPU programming. We target four scientific workloads: a seven-point stencil (memory-bound), BabelStream (memory-bound), miniBUDE (compute-bound), and Hartree–Fock (compute-bound with atomic operations); and compare their performance against vendor baselines on NVIDIA H100 and AMD MI300A GPUs. We show that Mojo’s performance is competitive with CUDA and HIP for memory-bound kernels, whereas gaps exist on AMD GPUs for atomic operations and for fast-math compute-bound kernels on both AMD and NVIDIA GPUs. Although the learning curve and programming requirements are still fairly low-level, Mojo can close significant gaps in the fragmented Python ecosystem in the convergence of scientific computing and AI.

Godoy, William [ORNL] (ORCID:0000000225905178)↗
DOE OSTI2024

KLOKKOS: Automated test generation for performance-portable programs

SAND2024-13830O The KLOKKOS project provides a suite of test generation and validation tools to increase maintainability and portability of Kokkos programs. KLOKKOS, a portmanteau of Klee and Kokkos, is developing an automated test generation for performance-portable programs using Clang/low-level virtual machine (LLVM) and formal methods. KLOKKOS is based on several topics in computer science: the development of symbolic and concolic analysis of LLVM and C++ codes, formal semantics and type theory, C++ templates and language features, LLVM compiler infrastructure, and data parallel primitives. Sandia National Laboratories is a multimission laboratory managed and operated by National Technology & Engineering Solutions of Sandia, LLC, a wholly owned subsidiary of Honeywell International Inc., for the U.S. Department of Energy’s National Nuclear Security Administration under contract DE-NA0003525

SciDAC↗
DOE OSTI2017

Domain Specific Language Support for Exascale. Final Project Report

The project developed a domain specific translator enable legacy MPI source code to tolerate communication delays, which are increasing over time due to technological factors. The translator performs source-to-source translation that incorporates semantic information into the translation process. The output of the translator is a C program runs as a data driven program, and uses an existing run time to overlap communication automatically

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2023

TenSQL v.2023.01.20

SAND2024-02520O Tensor SQL Database performs certain relational database management system/structured query language (RDBMS/SQL) queries faster than is possible using existing state-of-the-art databases. Tensor SQL is optimized for sparse linear algebra problems and other whole-table queries. Currently, the database is being used only for research and program development. Sandia National Laboratories is a multimission laboratory managed and operated by National Technology & Engineering Solutions of Sandia, LLC, a wholly owned subsidiary of Honeywell International Inc., for the U.S. Department of Energy’s National Nuclear Security Administration under contract DE-NA0003525.

Roose, Jonathan↗
DOE OSTI2013

Hanford River Protection Project Life cycle Cost Modeling Tool to Enhance Mission Planning - 13396

The Life cycle Cost Model (LCM) Tool is an overall systems model that incorporates budget, and schedule impacts for the entire life cycle of the River Protection Project (RPP) mission, and is replacing the Hanford Tank Waste Operations Simulator (HTWOS) model as the foundation of the RPP system planning process. Currently, the DOE frequently requests HTWOS simulations of alternative technical and programmatic strategies for completing the RPP mission. Analysis of technical and programmatic changes can be performed with HTWOS; however, life cycle costs and schedules were previously generated by manual transfer of time-based data from HTWOS to Primavera P6. The LCM Tool automates the preparation of life cycle costs and schedules and is needed to provide timely turnaround capability for RPP mission alternative analyses. LCM is the simulation component of the LCM Tool. The simulation component is a replacement of the HTWOS model with new capability to support life cycle cost modeling. It is currently deployed in G22, but has been designed to work in any full object-oriented language with an extensive feature set focused on networking and cross-platform compatibility. The LCM retains existing HTWOS functionality needed to support system planning and alternatives studies going forward. In addition, it incorporates new functionality, coding improvements that streamline programming and model maintenance, and capability to input/export data to/from the LCM using the LCM Database (LCMDB). The LCM Cost/Schedule (LCMCS) contains cost and schedule data and logic. The LCMCS is used to generate life cycle costs and schedules for waste retrieval and processing scenarios. It uses time-based output data from the LCM to produce the logic ties in Primavera P6 necessary for shifting activities. The LCM Tool is evolving to address the needs of decision makers who want to understand the broad spectrum of risks facing complex organizations like DOE-RPP to understand how near-term programmatic decisions affect life cycle costs and commitments. (authors)

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2013

Power/energy use cases for high performance computing

Power and Energy have been identified as a first order challenge for future extreme scale high performance computing (HPC) systems. In practice the breakthroughs will need to be provided by the hardware vendors. But to make the best use of the solutions in an HPC environment, it will likely require periodic tuning by facility operators and software components. This document describes the actions and interactions needed to maximize power resources. It strives to cover the entire operational space in which an HPC system occupies. The descriptions are presented as formal use cases, as documented in the Unified Modeling Language Specification [1]. The document is intended to provide a common understanding to the HPC community of the necessary management and control capabilities. Assuming a common understanding can be achieved, the next step will be to develop a set of Application Programing Interfaces (APIs) to which hardware vendors and software developers could utilize to steer power consumption.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2021

Using Verified Lifting to Optimize Legacy Stencil Codes (Final Project Report)

This project investigated new techniques for compiling stencil and stencil-like computations. Stencils computations are commonly found in applications such as image processing, physical simulations, image processing, and machine learning. In recent years, many high-performance domain-specific languages (DSLs) have been proposed to optimize stencil computations. To leverage such DSLs, however, existing codes often need to be rewritten. Such rewriting is manual, labor intensive, and error-prone. To alleviate such issues, this project investigated the application of program synthesis and artificial learning techniques to enable stencil computations to automatically leverage new high-performance DSLs. Rather than constructing syntax driven rules, verified lifting uses program synthesis to search for a target code fragment to compile the given input code into. In addition, it also searches for a proof that validates how the found target code fragment preserves the semantics of the original input. Thus, the target code fragment is guaranteed to be semantically equivalent to the input.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2016

Language games: Advanced R & R packages: Book Review

Readers who wrangle answers from data by extended refinement of available computational tools have many options and resources available. Inevitably, they will develop their own methods tailored to the problem at hand.Two new books have recently been published, each of which is useful addition to the library for a scientist who programs with data. The two books reviewed are both written by H. Wickham. The titles are ''Advanced R'' and ''R Packages'', both published in 2015.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2017

MR-2016 US-Japan Workshop on Magentic Reconnection Travel Support

The US-Japan workshop on Magnetic Reconnection (MR2016), was held in Napa California from March 7th through 11th, 2016. Details about the program, including invited speakers can be found here: (http://www.magneticreconnection.org/mr2016). Background: The MR Workshop is an international meeting that began in 2000 with its original focus on magnetic reconnection serving as a link between the research groups in US and Japan. Since then, the meeting has grown and is now recognized as one of the primary international workshops on magnetic reconnection. In its format, researchers from both the laboratory community and from the space research community have held 12 workshops bringing together the diverse researchers from the space and laboratory experimental fields. Plasma physics is the common language that ties together all scientists who study the waves, particle acceleration and heating, magnetic reconnection, dynamos, global and micro-stability of plasmas, magnetic turbulence and plasma’s transport problems. The meeting received $9,575 from the U.S. Dept. of Energy funding. This support was used to cover the registration fees ($575 per person) and accommodations for ten junior colleagues (graduate students and postdocs). Applications were solicited and then reviewed by the program committee based on recommendations from the applicants’ advisers.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2015

Andra's Memory Program - Linguistics and Semiology - 15587

In the framework of its Memory Program, Andra has launched various studies related to semiotics, for the medium and long term. Part of this work, dealing with linguistics and semiotics, is performed at the Centre de Recherches Semiotiques (CeReS) of the University of Limoges. Preliminary results highlight the fact that language durability may be reasonably considered for the medium term, but cannot be expected beyond a few thousands of years, and that languages cannot guarantee message appropriation. The role of Man and of the disposal site itself in message transmission is emphasized. In this context, art may play an important role in this transmission, by transmitting the meaning without necessarily using language. By the way, Andra has been exploring for several years the role of art for memory transmission, by supporting the work of artists interested in this field. In future research, Andra will promote more cross fertilization of artistic and academic reflections. (authors)

99 GENERAL AND MISCELLANEOUS↗
DOE OSTI2020

Plant science decadal vision 2020–2030: Reimagining the potential of plants for a healthy and sustainable future

Abstract Plants, and the biological systems around them, are key to the future health of the planet and its inhabitants. The Plant Science Decadal Vision 2020–2030 frames our ability to perform vital and far‐reaching research in plant systems sciences, essential to how we value participants and apply emerging technologies. We outline a comprehensive vision for addressing some of our most pressing global problems through discovery, practical applications, and education. The Decadal Vision was developed by the participants at the Plant Summit 2019, a community event organized by the Plant Science Research Network. The Decadal Vision describes a holistic vision for the next decade of plant science that blends recommendations for research, people, and technology. Going beyond discoveries and applications, we, the plant science community, must implement bold, innovative changes to research cultures and training paradigms in this era of automation, virtualization, and the looming shadow of climate change. Our vision and hopes for the next decade are encapsulated in the phrase reimagining the potential of plants for a healthy and sustainable future. The Decadal Vision recognizes the vital intersection of human and scientific elements and demands an integrated implementation of strategies for research (Goals 1–4), people (Goals 5 and 6), and technology (Goals 7 and 8). This report is intended to help inspire and guide the research community, scientific societies, federal funding agencies, private philanthropies, corporations, educators, entrepreneurs, and early career researchers over the next 10 years. The research encompass experimental and computational approaches to understanding and predicting ecosystem behavior; novel production systems for food, feed, and fiber with greater crop diversity, efficiency, productivity, and resilience that improve ecosystem health; approaches to realize the potential for advances in nutrition, discovery and engineering of plant‐based medicines, and "green infrastructure." Launching the Transparent Plant will use experimental and computational approaches to break down the phytobiome into a "parts store" that supports tinkering and supports query, prediction, and rapid‐response problem solving. Equity, diversity, and inclusion are indispensable cornerstones of realizing our vision. We make recommendations around funding and systems that support customized professional development. Plant systems are frequently taken for granted therefore we make recommendations to improve plant awareness and community science programs to increase understanding of scientific research. We prioritize emerging technologies, focusing on non‐invasive imaging, sensors, and plug‐and‐play portable lab technologies, coupled with enabling computational advances. Plant systems science will benefit from data management and future advances in automation, machine learning, natural language processing, and artificial intelligence‐assisted data integration, pattern identification, and decision making. Implementation of this vision will transform plant systems science and ripple outwards through society and across the globe. Beyond deepening our biological understanding, we envision entirely new applications. We further anticipate a wave of diversification of plant systems practitioners while stimulating community engagement, underpinning increasing entrepreneurship. This surge of engagement and knowledge will help satisfy and stoke people's natural curiosity about the future, and their desire to prepare for it, as they seek fuller information about food, health, climate and ecological systems.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2025

A change language for ontologies and knowledge graphs

Ontologies and knowledge graphs (KGs) are general-purpose computable representations of some domain, such as human anatomy, and are frequently a crucial part of modern information systems. Most of these structures change over time, incorporating new knowledge or information that was previously missing. Managing these changes is a challenge, both in terms of communicating changes to users and providing mechanisms to make it easier for multiple stakeholders to contribute. To fill that need, we have created KGCL, the Knowledge Graph Change Language (https://github.com/INCATools/kgcl), a standard data model for describing changes to KGs and ontologies at a high level, and an accompanying human-readable Controlled Natural Language (CNL). This language serves two purposes: a curator can use it to request desired changes, and it can also be used to describe changes that have already happened, corresponding to the concepts of “apply patch” and “diff” commonly used for managing changes in text documents and computer programs. Another key feature of KGCL is that descriptions are at a high enough level to be useful and understood by a variety of stakeholders—e.g. ontology edits can be specified by commands like “add synonym ‘arm’ to ‘forelimb’” or “move ‘Parkinson disease’ under ‘neurodegenerative disease’.” We have also built a suite of tools for managing ontology changes. These include an automated agent that integrates with and monitors GitHub ontology repositories and applies any requested changes and a new component in the BioPortal ontology resource that allows users to make change requests directly from within the BioPortal user interface. Overall, the KGCL data model, its CNL, and associated tooling allow for easier management and processing of changes associated with the development of ontologies and KGs.

96 KNOWLEDGE MANAGEMENT AND PRESERVATION↗
DOE OSTI2022

MAUD Interface Tool Kit (MILK)

Materials Analysis Using Diffraction (MAUD) is an open source Rietveld refinement program which fits diffraction models to diffraction spectra allowing quantitative diffraction analysis. The scripting interface developed here using python facilitates the choice of parameters to refine during the Rietveld fitting process and provides a simple MPI framework for running MAUD instances in parallel. The scripting language facilitates batch, custom, and reproducible Rietveld refinements of large datasets.

Savage, Daniel↗
DOE OSTI2017

pyomo.dae: a modeling and automatic discretization framework for optimization with differential and algebraic equations

We describe pyomo.dae, an open source Python-based modeling framework that enables high-level abstract specification of optimization problems with differential and algebraic equations. The pyomo.dae framework is integrated with the Pyomo open source algebraic modeling language, and is available at http://www.pyomo.org. One key feature of pyomo.dae is that it does not restrict users to standard, predefined forms of differential equations, providing a high degree of modeling flexibility and the ability to express constraints that cannot be easily specified in other modeling frameworks. Other key features of pyomo.dae are the ability to specify optimization problems with high-order differential equations and partial differential equations, defined on restricted domain types, and the ability to automatically transform high-level abstract models into finite-dimensional algebraic problems that can be solved with off-the-shelf solvers. Moreover, pyomo.dae users can leverage existing capabilities of Pyomo to embed differential equation models within stochastic and integer programming models and mathematical programs with equilibrium constraint formulations. Collectively, these features enable the exploration of new modeling concepts, discretization schemes, and the benchmarking of state-of-the-art optimization solvers.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2018

Nuclear, Land marker for a Waste Isolation Site: International Architecture Competition - 18240

The design and construction of a nuclear waste marker must include many architectural considerations. Very little research has been conducted by architects to address this issue to date. Historically, the task of designating a nuclear waste site has been a discussion predominantly contained within the scientific and engineering communities. In an effort to engage architects within this dialogue, arch out loud hosted the NUCLEAR competition as an international, architectural investigation into the design of a nuclear waste site marker. The NUCLEAR competition asks participants to design a marker to designate the site of the Waste Isolation Pilot Plant (WIPP) located near Carlsbad, New Mexico. The marker will be meant to be a means of passive institutional controls (PICs) to deter inadvertent human intrusion upon the site and should last 10,000 years. The NUCLEAR competition defined the purpose of the nuclear waste site marker as a means to communicate the danger of inadvertent intrusion from future generations. The competition requires that entries must be both legible in communication and durable in their construction. The competition brief challenged participants to consider how customs and languages will evolve over time and to predict what motivations future generations might have for digging at the site. Other background information was provided about the site such as how waste was stored and how the unique geology of the site seals the waste. The 1993 Sandia National Laboratories report titled Expert Judgment on Markers to Deter Inadvertent Human Intrusion into the Waste Isolation Pilot Plant [1] was referenced along with the 1992 WIPP Land Withdrawal Act [2], interviews with WIPP scientists [3] involved with the WIPP PICs program and the Nuclear Energy Agency Records Knowledge and Memory working group. Competition participants were given digital 3-D Computer-Aided Design models for reference that included the underground storage portion of the site, existing buildings and the 16-square-mile site boundary identified in the 1992 WIPP Land Withdrawal Act [2]. This paper will: - Provide a detailed description of the submitted proposals including graphic analysis of the visualizations, diagrams, technical drawings, jury comments and statements. - Catalogue and identify the consistent themes within all submissions with possible categories including: 1) overall architectural form and language, 2) integration of written language and symbols within architecture, 3) use of technology and robotics, 4) construction methods and materials. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗
DOE OSTI2014

OpenSoC Fabric

Recent advancements in technology scaling have shown a trend towards greater integration with large-scale chips containing thousands of processors connected to memories and other I/O devices using non-trivial network topologies. Software simulation proves insufficient to study the tradeoffs in such complex systems due to slow execution time, whereas hardware RTL development is too time-consuming. We present OpenSoC Fabric, an on-chip network generation infrastructure which aims to provide a parameterizable and powerful on-chip network generator for evaluating future high performance computing architectures based on SoC technology. OpenSoC Fabric leverages a new hardware DSL, Chisel, which contains powerful abstractions provided by its base language, Scala, and generates both software (C++) and hardware (Verilog) models from a single code base. The OpenSoC Fabric2 infrastructure is modeled after existing state-of-the-art simulators, offers large and powerful collections of configuration options, and follows object-oriented design and functional programming to make functionality extension as easy as possible.

Source record↗