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Profiling and Optimization [Slides]
Intended for Simulating Physics using Efficient and Effective code Development (SPEED) program. This is a LANL internal lecture series for computational science application developers.
Los Alamos National Laboratory High Performance Computing Overview [Slides]
We need such big computers because without testing, we don't understand the health of the AGING stockpile. Our big computers store a wealth of test data. We model weapons as they were tested and see if we can match the results to validate models, and we then use validated models along with dismantlement information on aging to certify the stockpile. Sometimes the results of tests can’t be explained well, so even that part requires massive computations, but applying the model to future use is an astonishing amount of computing.
The Viskores User's Guide (V.1.0)
High-performance computing relies on ever finer threading. Advances in processor technology include ever greater numbers of cores, hyperthreading, accelerators with integrated blocks of cores, and special vectorized instructions, all of which require more software parallelism to achieve peak performance. Traditional visualization solutions cannot support this extreme level of concurrency. Extreme scale systems require a new programming model and a fundamental change in how we design algorithms. To address these issues we created Viskores: the visualization toolkit for multi-/many-core architectures. Viskores supports a number of algorithms and the ability to design further algorithms through a top-down design with an emphasis on extreme parallelism. Viskores also provides support for finding and building links across topologies, making it possible to perform operations that determine manifold surfaces, interpolate generated values, and find adjacencies. Although Viskores provides a simplified high-level interface for programming, its template-based code removes the overhead of abstraction.
Performance Measurements of the Different DAOS Interfaces
The performance characteristics of the different DAOS interfaces for POSIX containers are evaluated and reported.
mystic and pathos: the summer project that evolved into a career of research in artificial intelligence, machine learning, and high-performance computing
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Deployment and Evaluation of SciStream on OLCF's Advanced Computing Ecosystem (ACE)
The growing demand for real-time analysis, experimental steering, and decision-making in scientific workflows has created a need for tightly coupled integrations between experimental facilities and high-performance computing (HPC) systems. The Department of Energy’s Integrated Research Infrastructure (IRI) initiative highlights data streaming as a key capability for enabling memory-to-memory data transfers, bypassing the limitations of traditional store-and-forward models. SciStream is a toolkit developed by researchers at Argonne National Laboratory (ANL) to support such streaming by addressing cross-domain security, delegated authentication, and application transparency. We deployed and evaluated SciStream on the Oak Ridge Leadership Computing Facility’s (OLCF) Advanced Computing Ecosystem (ACE) infrastructure, leveraging the Olivine OpenShift cluster and its high-bandwidth Data Streaming Nodes (DSNs) as gateway nodes. Our evaluation included synthetic streaming workloads derived from IRI science workflows, a streaming simulator, and integration with RabbitMQ to handle low-level messaging. This report documents the deployment process, performance evaluation, and challenges encountered, along with opportunities for future improvements.
The Viskores User's Guide, Release 1.1
High-performance computing relies on ever finer threading. Advances in processor technology include ever greater numbers of cores, hyperthreading, accelerators with integrated blocks of cores, and special vectorized instructions, all of which require more software parallelism to achieve peak performance. Traditional visualization solutions cannot support this extreme level of concurrency. Extreme scale systems require a new programming model and a fundamental change in how we design algorithms. To address these issues we created Viskores: the visualization toolkit for multi/many-core architectures. Viskores supports a number of algorithms and the ability to design further algorithms through a top-down design with an emphasis on extreme parallelism. Viskores also provides support for finding and building links across topologies, making it possible to perform operations that determine manifold surfaces, interpolate generated values, and find adjacencies. Although Viskores provides a simplified high-level interface for programming, its template-based code removes the overhead of abstraction.
OLCF’s Advanced Computing Ecosystem (ACE): FY25 Update for Ongoing Efforts
The advent of widespread use of artificial intelligence (AI) and machine learning (ML) models in science, coupled with fast data production rates of scientific instruments strain the traditional batch-oriented high-performance computing (HPC) environment. As scientific exploration continues to require more data and faster processing and analysis, new emerging technologies and capabilities to enable cross-facility and time-sensitive workflows are required for seamless integration of HPC and experimental facilities. The Advanced Computing Ecosystem (ACE) is a strategic initiative within the Oak Ridge Leadership Computing Facility (OLCF) established in 2024 to support the development of cutting-edge technologies to advance computational research and infrastructure at OLCF and across the Department of Energy (DOE). Several DOE initiatives are spearheading the evolution of the scientific landscape by blurring facility boundaries and connecting the user facilities to advance scientific capabilities and ensure energy dominance. The DOE Integrated Research Infrastructure (IRI) program is one example that is laying a foundation to support complex cross-facility workflows. The IRI program aims to integrate diverse computational resources, data infrastructures, and scientific instruments to facilitate collaboration and accelerate scientific discovery. The Interconnected Science Ecosystem (INTERSECT) initiative at Oak Ridge National Laboratory (ORNL) is another example that aims to revolutionize scientific research through AI-driven, interconnected autonomous laboratories and research facilities. Finally, the American Science Cloud (AmSC), recently announced in the “One Big Beautiful Bill”, aims to leverage prior infrastructure efforts of the IRI and automation and AI efforts of INTERSECT (and others) to build a federated, AI-augmented AmSC platform to unify the DOE’s computing, experimental, and data resources to catalyze scientific innovation.
Summary of Responses to the Request for Information (RFI) on Partnerships for Transformational Artificial Intelligence Models
The Department of Energy (DOE) issued a Request for Information (RFI) in December 2025 inviting public comments regarding partnerships for transformational Artificial Intelligence (AI) models for the Genesis Mission Consortium, a public-private partnership platform. This RFI solicited feedback from industry, nonprofit organizations, universities, independent research organizations and other stakeholders. Specifically, the RFI asked three questions on (1) mobilizing DOE National Laboratories to curate the scientific data in a responsible and privacy-preserving manner, (2) the extent to which existing general-purpose AI models can be leveraged and which scientific disciplines are priorities for such model development, and (3) mechanisms by which these AI models can be provided to scientific communities. This document summarizes the input from 194 unique nonproprietary responses from businesses, universities, nonprofit organizations, research institutes and laboratories as well as a variety of other contributors, including individual contributions.
Convexity, Squeezing, and the Elekes-Szabó Theorem
Here, this paper explores the relationship between convexity and sum sets. In particular, we show that elementary number theoretical methods, principally the application of a squeezing principle, can be augmented with the Elekes-Szabó Theorem in order to give new information. Namely, if we let $A \subset \mathbb R$, we prove that there exist $a,a' \in A$ such that\[\left | \frac{(aA+1)^{(2)}(a'A+1)^{(2)}}{(aA+1)^{(2)}(a'A+1)} \right | \gtrsim |A|^{31/12}.\]We are also able to prove that\[\max \{|A+ A-A|, |A^2+A^2-A^2|, |A^3 + A^3 - A^3|\} \gtrsim |A|^{19/12}.\]Both of these bounds are improvements of recent results and takes advantage of computer algebra to tackle some of the computations.
National Virtual Biotechnology Laboratory (NVBL) Symposium - Future S&T Needs: Artificial Intelligence/Machine Learning and Computing
National Virtual Biotechnology Laboratory (NVBL) Symposium - Jim Brase, Deputy Associate Director for Computation, Lawrence Livermore National Laboratory, “Future S&T Needs: Artificial Intelligence/Machine Learning and Computing”
An Orthogonal Recursive Bisection (ORB) Based Time Advancement Algorithm for CFD-DEM Solvers
The time integration of the granular phase in coupled computational fluid dynamics (CFD) – discrete element method (DEM) simulations presents a unique computational challenge brought about by the large variations in particle collisional time scales. Particles in the dilute regions of the computational domain can be advanced with large time steps while dense regions require much smaller time increments. However, the time step size in most solvers is globally set as the limit for accuracy and stability imposed by the collisions and is typically orders of magnitude less than that required away from collisions. This work addresses this precise issue and provides a strategy to avoid the use of a global conservative small time step size for the entire set of particles.A novel time stepping algorithm for CFD-DEM solvers using a partitioning approach using orthogonal recursive bisection (ORB) that allows for variable time steps among particles is described and its computational performance is compared against baseline explicit methods, typically used in several CFD-DEM solvers. ORB has advantages of being relatively quick and easy to update incrementally and has the required heuristic behavior (i.e., it will split the region in half with a cluster on each side) when groups of particles are well separated (clustered). The algorithm presented in this work uses a local time stepping approach to resolve collisional time scales for subsets of particles that are present at the leaves of the ORB, thereby resulting in substantial reduction of computational cost. The parallel implementation of this method where a ``knapsack” algorithm is used in tandem with ORB for effective load-balancing is also presented, where a best possible partitioning is obtained based on number of particles and local time-stepping costs. The algorithm is tested against benchmark problems with varying particle distributions that include fluidized bed and riser flow scenarios. Preliminary results indicate that the approach is 2-3X faster than traditional explicit methods for problems that involve both dense and dilute regions, while maintaining the same level of accuracy.
Exploring Applied Cryptosystems to Formally Verify Security in Cyber-Physical Systems
This project aims to evaluate RSA as a method for public-key encryption for cyber-physical systems (CPS). As technology advances, cyber attacks are increasing, and with them, the need for cybersecurity advances; the average cost for cybercrime in the world was estimated at $6 trillion in 2021. A public-key cryptosystem that has been around since 1977, RSA has recently garnered some critiques for its fragility, computational cost, and lazy implementation. In this project I will review the mathematical derivation of RSA, analyze the practical implications of such mathematical framework for the security of RSA, and propose a formal methods based approach to verify encryption schemes for CPS.
Sandia National Laboratories' Holistic Data Center Design Integrates Energy- and Water-Efficiency, Flexibility, and Resilience
This success story highlights Sandia National Laboratories and their holistic data center approach, which provides resilient energy- and water-efficient cooling for high-performance computing (HPC) systems.
Improvements in Optical Surface Measurement Using Reflected Computer Vision Targets
Since 2021, NREL has been developing a system to measure heliostats by measuring the deflection of printed computer vision targets, called the Reflected Target Non-intrusive Assessment (ReTNA) [6], [7]. While this system will have lower resolution than a fringe deflectometry system, it has several important advantages that make it a complimentary technology: 2D surface slope measurement can be generated from a single image, it can operate in ambient lighting, target points can be directly located in 3D space with photogrammetry allowing for a non-flat target, and it's well suited to using a smaller target, and multiple images to measure larger optical surfaces. ReTNA has undergone several significant changes and improvements, described below. This talk will summarize new system layouts designed for commercial use, new computer vision algorithms used to automate the analysis process and validation campaigns for the ReTNA software.
WAVES: Build Systems for Computational Science and Engineering
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An Adaptive Geometry-Free Thermo-Mechanical Model for Directed Energy Deposition Process Modeling
This presentation describes a novel, geometry-free thermo-mechanical model with adaptive subdomain con- struction to accurately predict the thermal conditions, distortions, and residual stresses throughout the directed energy deposition (DED) process. A novel finite element workflow is designed to con- duct the numerical analysis, based on the multi-app and data transfer capabilities in the open-source Multiphysics Object-Oriented Simulation Environment (MOOSE). Unlike with traditional methods, the part geometry in this model is not predefined. Instead, it is a combined effect of the processing parameters and material properties. At each time step, the model utilizes a subdomain construction paradigm to model the material deposition. A specialized mesh adaptivity scheme is incorporated to provide an accurate prediction while reducing the overall computational cost. The results generated by the proposed model show general agreement with the experimental measurements for the single track scan with varying processing parameters and demonstrate reasonable predictions for higher material buildups.