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At least 667 records · Page 37

FCP: A Fast and Scalable Data Copy Tool for High Performance Parallel File Systems

The design of HPC file and storage systems has largely been driven by the requirements on capability, reliability, and capacity. However, the convergence of large-scale simulations with big data analytics have put the data, its usability, and management back on the front and center position. One of the most common and time consuming data management tasks is the transfer of very large datasets within and across file systems.In this paper, we are introducing the FCP tool, a file system agnostic copy tool designed at the OLCF for scalable and high-performance data transfers between two file system endpoints. It provides an array of interesting features such as adaptive chunking, checksumming on the fly, checkpoint and resume capabilities to handle failures, and preserving stripe information for Lustre file system among others. It is currently available on the Titan supercomputer at the OLCF. Initial tests have shown that FCP has much better and scalable performance than traditional data copy tools and it was capable of transferring petabyte-scale datasets between two Lustre file systems.

Wang, Feiyi↗

Towards an Open (Data) Science Analytics-Hub for Reproducible Multi-Model Climate Analysis at Scale

Open Science is key to future scientific research and promotes a deep transformation in the whole scientific research process encouraging the adoption of transparent and collaborative scientific approaches aimed at knowledge sharing. Open Science is increasingly gaining attention in the current and future research agenda worldwide. To effectively address Open Science goals, besides Open Access to results and data, it is also paramount to provide tools or environments to support the whole research process, in particular the design, execution and sharing of transparent and reproducible experiments, including data provenance (or lineage) tracking. This work introduces the Climate Analytics-Hub, a new component on top of the Earth System Grid Federation (ESGF), which joins big data approaches and parallel computing paradigms to provide an Open Science environment for reproducible multi-model climate change data analytics experiments at scale. An operational implementation has been set up at the SuperComputing Centre of the Euro- Mediterranean Center on Climate Change, with the main goal of becoming a reference Open Science hub in the climate community regarding the multi-model analysis based on the Coupled Model Intercomparison Project (CMIP).

analytics-hub↗

Data-driven computational prediction and experimental realization of exotic perovskite-related polar magnets

Rational design of technologically important exotic perovskites is hampered by the insufficient geometrical descriptors and costly and extremely high-pressure synthesis, while the big-data driven compositional identification and precise prediction entangles full understanding of the possible polymorphs and complicated multidimensional calculations of the chemical and thermodynamic parameter space. Here we present a rapid systematic data-mining-driven approach to design exotic perovskites in a high-throughput and discovery speed of the A 2 BB ’O 6 family as exemplified in A 3 TeO 6 . The magnetoelectric polar magnet Co 3 TeO 6 , which is theoretically recognized and experimentally realized at 5 GPa from the six possible polymorphs, undergoes two magnetic transitions at 24 and 58 K and exhibits helical spin structure accompanied by magnetoelastic and magnetoelectric coupling. We expect the applied approach will accelerate the systematic and rapid discovery of new exotic perovskites in a high-throughput manner and can be extended to arbitrary applications in other families.

36 MATERIALS SCIENCE↗

Scalable subsurface inverse modeling of huge data sets with an application to tracer concentration breakthrough data from magnetic resonance imaging

When characterizing subsurface properties is crucial for reliable and cost-effective groundwater supply management and contaminant remediation. With recent advances in sensor technology, large volumes of hydro-geophysical and geochemical data can be obtained to achieve high-resolution images of subsurface properties. However, characterization with such a large amount of information requires prohibitive computational costs associated with “big data” processing and numerous large-scale numerical simulations. To tackle such difficulties, the Principal Component Geostatistical Approach (PCGA) has been proposed as a “Jacobian-free” inversion method that requires much smaller forward simulation runs for each iteration than the number of unknown parameters and measurements needed in the traditional inversion methods. PCGA can be conveniently linked to any multi-physics simulation software with independent parallel executions. In our paper, we extend PCGA to handle a large number of measurements (e.g. 106 or more) by constructing a fast preconditioner whose computational cost scales linearly with the data size. For illustration, we characterize the heterogeneous hydraulic conductivity (K) distribution in a laboratory-scale 3-D sand box using about 6 million transient tracer concentration measurements obtained using magnetic resonance imaging. Since each individual observation has little information on the K distribution, the data was compressed by the zero-th temporal moment of breakthrough curves, which is equivalent to the mean travel time under the experimental setting. Moreover, only about 2,000 forward simulations in total were required to obtain the best estimate with corresponding estimation uncertainty, and the estimated K field captured key patterns of the original packing design, showing the efficiency and effectiveness of the proposed method. This article is protected by copyright. All rights reserved.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

The 2024 “Hacking Limnology” Workshop Series and Virtual Summit: Increasing Inclusion, Participation, and Representation in the Aquatic Sciences

The 4th Aquatic Ecosystem MOdeling Network—Junior (AEMON-J) Hacking Limnology Workshop and 5th Virtual Summit: Incorporating Data Science and Open Science in the Aquatic Sciences (DSOS) convened 15–19 July 2024. During the week, these joint communities engaged in activities at the intersection of big data, open science, modeling, remote sensing, and the aquatic sciences. The weeklong event, with over 100 aquatic science practitioners and enthusiasts, followed a similar structure to previous years, comprising three days of workshops followed by two days of the virtual summit.

54 ENVIRONMENTAL SCIENCES↗

Machine learning and ligand binding predictions: A review of data, methods, and obstacles

We report that computational predictions of ligand binding is a difficult problem, with more accurate methods being extremely computationally expensive. The use of machine learning for drug binding predictions could possibly leverage the use of biomedical big data in exchange for time-intensive simulations. This paper reviews current trends in the use of machine learning for drug binding predictions, data sources to develop machine learning algorithms, and potential problems that may lead to overfitting and ungeneralizable models. A few popular datasets that can be used to develop virtual high-throughput screening models are characterized using spatial statistics to quantify potential biases. We can see from evaluating some common benchmarks that good performance correlates with models with high-predicted bias scores and models with low bias scores do not have much predictive power. A better understanding of the limits of available data sources and how to fix them will lead to more generalizable models that will lead to novel drug discovery.

59 BASIC BIOLOGICAL SCIENCES↗

Apache Calcite: A Foundational Framework for Optimized Query Processing Over Heterogeneous Data Sources

Apache Calcite is a foundational software framework that provides query processing, optimization, and query language support to many popular open-source data processing systems such as Apache Hive, Apache Storm, Apache Flink, Druid, and MapD. The goal of this paper is to formally introduce Calcite to the broader research community, brie y present its history, and describe its architecture, features, functionality, and patterns for adoption. Calcite's architecture consists of a modular and extensible query optimizer with hundreds of built-in optimization rules, a query processor capable of processing a variety of query languages, an adapter architecture designed for extensibility, and support for heterogeneous data models and stores (relational, semi-structured, streaming, and geospatial). This exible, embeddable, and extensible architecture is what makes Calcite an attractive choice for adoption in big-data frameworks. It is an active project that continues to introduce support for the new types of data sources, query languages, and approaches to query processing and optimization.

Begoli, Edmon↗

Azure Data Tools (FKA: OEDI (Open Energy Data Initiative) Data Access Tools) [SWR-23-92]

The Open Energy Data Initiative (OEDI) provides a number of tools to enable the use of the open data published through this initiative. The source is largely written in Python, including Jupyter notebooks. The Open Energy Data Initiative (OEDI) is a partnership between the National Renewable Energy Laboratory (NREL), the U.S. Department of Energy (DOE), Amazon, Microsoft, and Google to provide universal access to big data in the cloud. At the heart of OEDI is a centralized repository of high-value energy research datasets aggregated from DOE Program Offices, National Laboratories and other collaborators.

Jonathan, Weers↗

Framework for an adaptive integrated observation system using a hierarchy of machine learning approaches

Focal Area(s): 1. Data acquisition enabled by machine learning, AI, and advanced methods including experimental/network design/optimization, and hardware-related efforts involving AI. 2. Insight gleaned from complex measurements using AI, big data analytics, and other advanced methods, including explainable AI and physics- or knowledge-guided AI Science Challenge and Rationale: Atmospheric processes are stochastic, occur at scales from the micrometer to many kilometers, and are constantly changing over time. Characterizing these interactions and associated environmental conditions using traditional measurement techniques is difficult and can take years to build statistics on atmospheric phenomena that occurs episodically. Developing new innovative approaches to modify sampling strategies in real-time would enable the routine collection of targeted measurements focused on a specific set of science questions.

54 ENVIRONMENTAL SCIENCES↗

Reducing Data Center Peak Cooling Demand and Energy Costs with Underground Thermal Energy Storage (UTES)

By recent estimates, data center energy demands are projected to consume between 6.7% and 12% of U.S. annual electricity generation by the year 2028, driven primarily by expanded demands from cloud services, big data analytics, and Artificial Intelligence (AI) (Shehabi et al., 2024). As much as 40% of data center total energy consumption are loads associated with the site infrastructure cooling systems, and these are often highly water consumptive (Aljbour et al., 2024). For energy system planners, this presents significant challenges to meeting and managing the anticipated loads, and especially the peak loads of projected data center deployments. Geothermal technologies offer two unique solutions to these challenges: 1) by serving loads through the deployment of new conventional and/or next-generation geothermal power technologies such as EGS and 2) through an often-overlooked opportunity to reduce data center peak cooling loads. The latter is the focus of this paper which explores Cold Underground Thermal Energy Storage ("Cold UTES") as an emerging industrial-scale geothermal cooling solution. This cooling solution is energy efficient, non-water-consumptive, and utilizes long duration energy storage (LDES) on both diurnal and seasonal time scales. Cold UTES has the potential to also function as a virtual power plant (VPP). The US Department of Energy's Geothermal Technologies Office is supporting R&D to understand the grid and system-wide value, costs, and impacts of deploying this emergent cooling solution at scale.

AI↗

Materials informatics: From the atomic-level to the continuum

We report that in recent years materials informatics, which is the application of data science to problems in materials science and engineering, has emerged as a powerful tool for materials discovery and design. This relatively new field is already having a significant impact on the interpretation of data for a variety of materials systems, including those used in thermoelectrics, ferroelectrics, battery anodes and cathodes, hydrogen storage materials, polymer dielectrics, etc. Its practitioners employ the methods of multivariate statistics and machine learning in conjunction with standard computational tools (e.g., density-functional theory) to, for example, visualize and dimensionally reduce large data sets, identify patterns in hyperspectral data, parse microstructural images of polycrystals, characterize vortex structures in ferroelectrics, design batteries and, in general, establish correlations to extract important physics and infer structure-property-processing relationships. In this Overview, we critically examine the role of informatics in several important materials subfields, highlighting significant contributions to date and identifying known shortcomings. We specifically focus attention on the difference between the correlative approach of classical data science and the causative approach of physical sciences. From this perspective, we also outline some potential opportunities and challenges for informatics in the materials realm in this era of big data.

36 MATERIALS SCIENCE↗

Application of a Machine Learning Algorithm in Generating an Evapotranspiration Data Product From Coupled Thermal Infrared and Microwave Satellite Observations

Land surface evapotranspiration (ET) is one of the main energy sources for atmospheric dynamics and a critical component of the local, regional, and global water cycles. Consequently, accurate measurement or estimation of ET is one of the most active topics in hydro-climatology research. With massive and spatially distributed observational data sets of land surface properties and environmental conditions being collected from the ground, airborne or space-borne platforms daily over the past few decades, many research teams have started to use big data science to advance the ET estimation methods. The Geostationary satellite Evapotranspiration and Drought (GET-D) product system was developed at the National Oceanic and Atmospheric Administration (NOAA) in 2016 to generate daily ET and drought maps operationally. The primary inputs of the current GET-D system are the thermal infrared (TIR) observations from NOAA GOES satellite series. Because of the cloud contamination to the TIR observations, the spatial coverage of the daily GET-D ET product has been severely impacted. Based on the most recent advances, we have tested a machine learning algorithm to estimate all-weather land surface temperature (LST) from TIR and microwave (MW) combined satellite observations. With the regression tree machine learning approach, we can combine the high accuracy and high spatial resolution of GOES TIR data with the better spatial coverage of passive microwave observations and LST simulations from a land surface model (LSM). The regression tree model combines the three LST data sources for both clear and cloudy days, which enables the GET-D system to derive an all-weather ET product. This paper reports how the all-weather LST and ET are generated in the upgraded GET-D system and provides an evaluation of these LST and ET estimates with ground measurements. The results demonstrate that the regression tree machine learning method is feasible and effective for generating daily ET under all weather conditions with satisfactory accuracy from the big volume of satellite observations.

54 ENVIRONMENTAL SCIENCES↗

110th Anniversary: Bridging the Time and Length Scales of Process Systems with Data

Here we report on the role of data as a "bridge" connecting the different time/length scales of chemical processes in mathematical modeling and multi-scale, integrated decision making. We argue that this is a fitting role of "big data" in the chemical industry, an area that comprises complicated yet deterministic physical systems. Such systems can be described using physical and chemical laws that are generally well-understood. Accordingly, data and data analysis are less likely to provide the unexpected and/or surprising insights that they have generated in other sectors (e.g., the transactional economy, social sciences). Nevertheless, historical operating data (which are often plentiful and available at little cost) can be converted to very useful information for multi-scale mathematical modeling of chemical processes. Several examples of integration are provided, mapped on the continuum of time and length scales of process systems. Current research challenges and potential directions for future work are discussed.

42 ENGINEERING↗

Imaging nanoscale lattice variations by machine learning of x-ray diffraction microscopy data

In this paper, we present a novel methodology based on machine learning to extract lattice variations in crystalline materials, at the nanoscale, from an x-ray Bragg diffraction-based imaging technique. By employing a full-field microscopy setup, we capture real space images of materials, with imaging contrast determined solely by the x-ray diffracted signal. The data sets that emanate from this imaging technique are a hybrid of real space information (image spatial support) and reciprocal lattice space information (image contrast), and are intrinsically multidimensional (5D). By a judicious application of established unsupervised machine learning techniques and multivariate analysis to this multidimensional data cube, we show how to extract features that can be ascribed physical interpretations in terms of common structural distortions, such as lattice tilts and dislocation arrays. Finally, we demonstrate this 'big data' approach to x-ray diffraction microscopy by identifying structural defects present in an epitaxial ferroelectric thin-film of lead zirconate titanate.

36 MATERIALS SCIENCE↗

UPS: Unified PMU-Data Storage System to Enhance T+D PMU Data Usability

The emerging distribution-level phasor measurement unit (D-PMU) is expected to play an important role in enhancing distribution system observability and situational-awareness. It is a demanding yet challenging task to develop advanced D-PMU data management and analytics tools to improve D-PMU data usability and further promote D-PMU projects deployment. This paper focuses on D-PMU data processing and storage. It presents a brief review of existing D-PMU data storage systems and points out their limitations on high-performance, flexibility, and scalability. To overcome the limitations, a unified PMU-data storage system (UPS) is proposed. Specifically, a unified I/O interface between storage servers and computing jobs is developed to effectively reduce the overhead of managing various computing jobs and data analytics over multiple storage infrastructures; and PMUCache with PMUCache partitioning and PMUCache replacement algorithms are designed to support in-situ data processing and shared distributed data storage and further serve the computing jobs/queries with different Quality of Service (QoS) requirements. Through a series of experiments, it is demonstrated that UPS achieves high performance on fast and big data processing and storage, and efficiently increases the flexibility and scalability of PMU data management systems.

42 ENGINEERING↗

Battery Health Quantification for TDRS Spacecraft by Using Signature Discriminability Measurement

The NASA/GSFC Space Network Project Office (SN) currently operates a constellation of ten geosynchronous TDRS spacecraft launched over the past 30 years. The SN project collects up to 16.5 Gigabytes of telemetry every month. Generally, the spacecraft health and functionality are obtained by the use of real-time telemetry data for the multiple spacecraft subsystems, which are transmitted to the main ground station at the White Sands Complex in Las Cruces, NM. Recently, the SN has instituted a program of Big Data to analyze the large amounts of data using a variety of tools including Machine Learning, Artificial Intelligence, development of training sets, and a variety of mathematical modeling tools. The goal is to improve spacecraft management and obtain a more accurate prediction of the spacecraft end of life. The combination of these efforts with those of the Aerospace Corporation, which has a contract with the SN to produce yearly reliability estimates for the TDRS fleet, will be performed. This paper presents a new concept called telemetry quality quantification (TQQ) and discusses the progress that has been made in battery performance estimation for the second-generation TDRS spacecraft using a signature discriminability measures (SDM) algorithm combined with the Aerospace Corp. battery life estimation models. This activity is important because many of the TDRS fleet of spacecraft have exceeded their on-orbit design lifetime and, therefore, NASA must carefully manage the spacecraft to continue operations while avoiding an end-of-mission scenario that leaves a non-functioning spacecraft in geosynchronous orbit.

Ma, Kenneth Y.↗

Classification of machine learning frameworks for data-driven thermal fluid models

Thermal fluid processes are inherently multi-physics and multi-scale, involving mass-momentum-energy transport phenomena at multiple scales. Thermal fluid simulation (TFS) is based on solving conservative equations, for which – except for “first-principles” direct numerical simulation – closure relations (CRs) are required to provide microscopic interactions or so-called sub-grid-scale physics. In practice, TFS is realized through reduced-order modeling, and its CRs as low-fidelity models can be informed by observations and data from relevant and adequately evaluated experiments and high-fidelity simulations. This paper is focused on data-driven TFS models, specifically on their development using machine learning (ML). Five ML frameworks are introduced including physics-separated ML (PSML or Type I ML), physics-evaluated ML (PEML or Type II ML), physics-integrated ML (PIML or Type III ML), physics-recovered (PRML or Type IV ML), and physics-discovered ML (PDML or Type V ML). The frameworks vary in their performance for different applications depending on the level of knowledge of governing physics, source, type, amount and quality of available data for training. Notably, outlined for the first time in this paper, Type III models present stringent requirements on modeling, substantial computing resources for training, and high potential in extracting value from “big data” in thermal fluid research. Here the current paper demonstrates and investigates ML frameworks in three examples. First, we utilize the heat diffusion equation with a nonlinear conductivity model formulated by convolutional neural networks (CNNs) and feedforward neural networks (FNNs) to illustrate the applications of Type I, Type II, Type III, and Type V ML. The results indicate a preference for Type II ML under deficient data support. Type III ML can effectively utilize field data, potentially generating more robust predictions than Type I and Type II ML. CNN-based closures exhibit more predictability than FNN-based closures, but CNN-based closures require more training data to obtain accurate predictions. Second, we illustrate how to employ Type I ML and Type II ML frameworks for data-driven turbulence modeling using reference works. Third, we demonstrate Type I ML by building a deep FNN-based slip closure for two-phase flow modeling. The results show that deep FNN-based closures exhibit a bounded error in the prediction domain.

42 ENGINEERING↗

XRootD popularity on hadoop clusters

Performance data and metadata of the computing operations at the CMS experiment are collected through a distributed monitoring infrastructure, currently relying on a traditional Oracle database system. This paper shows how to harness Big Data architectures in order to improve the throughput and the efficiency of such monitoring. A large set of operational data - user activities, job submissions, resources, file transfers, site efficiencies, software releases, network traffic, machine logs - is being injected into a readily available Hadoop cluster, via several data streamers. The collected metadata is further organized running fast arbitrary queries; this offers the ability to test several Map&Reduce-based frameworks and measure the system speed-up when compared to the original database infrastructure. By leveraging a quality Hadoop data store and enabling an analytics framework on top, it is possible to design a mining platform to predict dataset popularity and discover patterns and correlations.

97 MATHEMATICS AND COMPUTING↗