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DOE OSTI2023

Accelerating Markov Chain Monte Carlo sampling with diffusion models

Global fits of physics models require efficient methods for exploring high-dimensional and/or multimodal posterior functions. We introduce a novel method for accelerating Markov Chain Monte Carlo (MCMC) sampling by pairing a Metropolis-Hastings algorithm with a diffusion model that can draw global samples with the aim of approximating the posterior. We briefly review diffusion models in the context of image synthesis before providing a streamlined diffusion model tailored towards low-dimensional data arrays. We then present our adapted Metropolis-Hastings algorithm which combines local proposals with global proposals taken from a diffusion model that is regularly trained on the samples produced during the MCMC run. Our approach leads to a significant reduction in the number of likelihood evaluations required to obtain an accurate representation of the Bayesian posterior across several analytic functions, as well as for a physical example based on a global fit of parton distribution functions. Our method is extensible to other MCMC techniques, and we briefly compare our method to similar approaches based on normalising flows. A code implementation can be found at https://github.com/NickHunt-Smith/MCMC-diffusion.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

NASA NTRS2001

The SHIVA Project: Spaceflight Holography in a Virtual Apparatus

The poster summarizes theoretical and experimental concepts used in the development of the proposed NASA flight experiment SHIVA (Spaceflight Holography in a Virtual Apparatus). SHIVA exploits a unique holography-based, diagnostics tools to understand the behavior of small particles subjected to transient accelerations. Flight experiment protocols and apparatus will test model equations, characterize the acceleration environment and other microgravity phenomena. The primary objective of SHIVA is to enhance the current understanding of complex dynamics of small particles subjected to transient microgravity conditions. Existing theory did not fully describe the movement of particles in fluids in the microgravity environment. Results from recent ground-based experiments and comparison with the model recently developed by Rangel and Coimbra are presented.

Jim Trolinger↗

DOE OSTI2021

A comparison between residential relocation timing of Sydney and Chicago residents: A Bayesian survival analysis

We report that understanding households' behaviour in residential relocation timing is of great importance in the field of transport engineering and economics. This research aims to develop a residential relocation model by considering the potential dynamic impacts of other households' decisions and variables, including economic and demographic attributes, housing features, intra-household decision-making structures, travel mode choice, and other life-course attributes. A multivariate parametric survival model with both fixed and time-varying covariates is developed. To the best of the authors' knowledge, this study is the first paper in the literature of residential relocation timing to propose the use of a Bayesian model in contrast to the widely used classic frequentist approach and have conducted a discussion on its advantages. An emerging residential relocation dataset collected for two cities in Australia and the USA (Sydney and Chicago cities) has been used, which covers residence, vehicle ownership, occupation, education, economic and demographic attributes of respondents. A comprehensive comparison between the results of two cities and a comparison between two Bayesian and frequentist approaches are made. This study confirms the impact of life-course variables, intra-household decision-making behaviours, and sociodemographic attributes on home mobility. According to the model outputs, the accelerating or decelerating impact of explanatory variables on the relocation timing has been almost the same in the two cities. The Bayesian model was confirmed to have some advantages over the frequentist model, including being straightforward to interpret, availability of making inferences on the results, and ease of handling complex models, and optimisation convergence complexities.

99 GENERAL AND MISCELLANEOUS↗

NASA NTRSDate not supplied

Study of Advanced Occupant Models to Quantify Injury Risk for eVTOL Vehicles

Urban transportation is currently evolving from traditional ground-based vehicles (cars, taxis, and buses) to include air-based electric vertical take-off and landing (eVTOL) vehicles which can be utilized for on-demand transportation, cargo transport, and emergency services. These new eVTOL vehicles are designed to be small, lightweight, and able to operate autonomously without user intervention. Safety is a big part of eventual eVTOL adoption, however gaps in the consideration of safety features exist. Anthropomorphic test devices (ATDs) are used in aerospace crashworthiness standards to quantify occupant injury risk and develop improved safety designs for emergency landing situations, but the ATDs currently used in aircraft certification requirements were developed many decades ago. Developments have occurred over the years involving ATD technology, which includes a host of newer and more biofidelic ATDs such as the Test Device for Human Occupant Restraint (THOR). Increased computing power has also allowed for detailed computational human body models (HBMs) to be created, such as the Global Human Body Model Consortium (GHBMC). This study aims to assess the capability of both HBMs and new ATD designs to identify injury mechanisms within eVTOL relevant emergency landing conditions. Finite element (FE) analysis was used to expand upon full-scale and seat level impact testing conducted by researchers at the National Aeronautics and Space Administration (NASA) to look at effects of occupant model configurations on prediction of injury. The GHBMC HBM and THOR ATD models were simulated in the seat level test conditions to characterize differences between these advanced assessment tools and traditional ATDs in the isolated seat loading environment. Results identified key differences in the responses from each of the models utilized and compared their impact response in head, neck, and spinal injury metrics. The THOR model identified potential risks for head injuries due to head impacts on the seat, however it predicted lower spinal loads than the other occupant surrogates. The GHBMC showed distinctly different biomechanical responses compared to the ATD. The GHBMC model is much more deformable than the ATDs and it exhibited higher distribution of forces and increased sensitivity to the duration of acceleration pulses. Both models incorporated into this study identified key mechanisms for injury that should be considered for passenger safety in the development of these novel aircraft. In addition, this study demonstrated the value of FE modeling for running a variety of complex human surrogates to identify potential injury mechanisms for consideration in regulation and development of new aircraft. Continued research in this field to improve validation these models will only lead to safer aircraft and more comprehensive safety measures.

Crashworthiness↗

NASA NTRSDate not supplied

Study of Advanced Occupant Models to Quantify Injury Risk for eVTOL Vehicles

Crashworthiness↗

NASA NTRS2003

International Space Station Microgravity Analytical Model Correlation And Update

The acceleration environment aboard the completed International Space Station (ISS) is a key resource for scientific and technological endeavors. Hardware verification activIties and early measurements indicate that the ISS is well on the way of meeting these "Assembly Complete" "microgravity" provisions, however, the simulation models that compute these accelerations have, to date, lacked the high degree of empirical validation typical of standard aerospace industry practices. Assembly stage, on-orbit measurements are used to address this shortcoming and to develop higher confidence in the simulation models. The Phase I correlation results show the analyses to be consistently conservative, producing higher than measured levels. The 25 to 30% greater quasi-steady computations are deemed acceptable for verification. Updates are made to localized structural dynamic and vibroacoustic parameters that reduce responses in selected one-third octave bands by almost 50%. These models are then used for the Assembly Complete verification analysis which concludes that the ISS vehicle meets the ISS microgravity requirements with minor reservations. Two of the sixteen rack are marginally non-compliant in the quasi-steady regime, and operational constraints are needed on the U. S. Lab and ESA APM vacuum resource vents, and the Russian Resistive Exercise Device in the structural dynamic regime.

DelBasso, Steve↗

DOE OSTI2024

An FPGA-based hardware accelerator supporting sensitive sequence homology filtering with profile hidden Markov models

Abstract Background Sequence alignment lies at the heart of genome sequence annotation. While the BLAST suite of alignment tools has long held an important role in alignment-based sequence database search, greater sensitivity is achieved through the use of profile hidden Markov models (pHMMs). Here, we describe an FPGA hardware accelerator, called HAVAC, that targets a key bottleneck step (SSV) in the analysis pipeline of the popular pHMM alignment tool, HMMER. Results The HAVAC kernel calculates the SSV matrix at 1739 GCUPS on a $$\sim$$ ∼ $3000 Xilinx Alveo U50 FPGA accelerator card, $$\sim$$ ∼ 227× faster than the optimized SSV implementation in nhmmer . Accounting for PCI-e data transfer data processing, HAVAC is 65× faster than nhmmer’s SSV with one thread and 35× faster than nhmmer with four threads, and uses $$\sim$$ ∼ 31% the energy of a traditional high end Intel CPU. Conclusions HAVAC demonstrates the potential offered by FPGA hardware accelerators to produce dramatic speed gains in sequence annotation and related bioinformatics applications. Because these computations are performed on a co-processor, the host CPU remains free to simultaneously compute other aspects of the analysis pipeline.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2024

Application of performance portability solutions for GPUs and many-core CPUs to track reconstruction kernels

Next generation High-Energy Physics (HEP) experiments are presented with significant computational challenges, both in terms of data volume and processing power. Using compute accelerators, such as GPUs, is one of the promising ways to provide the necessary computational power to meet the challenge. The current programming models for compute accelerators often involve using architecture-specific programming languages promoted by the hardware vendors and hence limit the set of platforms that the code can run on. Developing software with platform restrictions is especially unfeasible for HEP communities as it takes significant effort to convert typical HEP algorithms into ones that are efficient for compute accelerators. Multiple performance portability solutions have recently emerged and provide an alternative path for using compute accelerators, which allow the code to be executed on hardware from different vendors. We apply several portability solutions, such as Kokkos, SYCL, C++17 std::execution::par, Alpaka, and OpenMP/OpenACC, on two mini-apps extracted from the mkFit project: p2z and p2r. These apps include basic kernels for a Kalman filter track fit, such as propagation and update of track parameters, for detectors at a fixed z or fixed r position, respectively. The two mini-apps explore different memory layout formats. We report on the development experience with different portability solutions, as well as their performance on GPUs and many-core CPUs, measured as the throughput of the kernels from different GPU and CPU vendors such as NVIDIA, AMD and Intel.

Kwok, Ka Hei Martin↗

DOE OSTI2020

Free-field Ground Motion Induced by Underground Explosions at Aqueduct Mesa with Predictions for Physical Experiment One (PE1)

We fit standard power-law models for ground acceleration and particle velocity using scaled ground motion observations from underground nuclear explosions at Aqueduct Mesa on the Nevada National Security Site. The models are then validated using small-scale high-explosive (HE) test data from nearby Rainier Mesa. The comparison between model predictions and observations is good and can be made more favorable if the assumed yield for the HE tests are doubled. Further validation is made with a numerical experiment that additionally shows a transition in ground motion attenuation to elastic propagation (1 = r). An extended model is provided to incorporate the long-range transition in attenuation, which results in increased ground motions at farther range. We then make predictions for the field experiment, Physical Experiment One (PE1), to take place in P-tunnel on Aqueduct Mesa, and suggest that the models could be used in planning various operations for PE1.

45 MILITARY TECHNOLOGY, WEAPONRY, AND NATIONAL DEF↗

DOE OSTI2025

LAROMance Grade 91 Model Integration in NEML2

New reactor designs are targeting higher operating temperatures for increased thermal efficiency when compared to the current fleet of light water reactors. Designing structural components for these high temperature environments with reliable long-term operations requires material models that can accurately capture the deformation mechanisms active in these environments. The LAROMance surrogate material models are based on a database of mechanistic crystal plasticity simulations for high-temperature conditions. Inputs to the LAROMance models reflect the microstructural pedigree of the material, like dislocation densities and precipitate contents. Based on the evolution of these microstructural features, the LAROMance model provides the engineering scale constitutive model response. The LAROMance model was recently parameterized for Grade 91, a high temperature alloy. In the present work, the Grade 91 LAROMance model is implemented in the New Material Model Library, version 2 (NEML2). NEML2 provides a modular way to build material models from smaller blocks and was developed to vectorize the material update to efficiently run on modern computational architectures with graphics processing unit accelerators. NEML2 constitutive models can be used in simulations based on the multiphysics object-oriented simulation environment (MOOSE). This report provides details on the implementation of the Grade 91 LAROMance model in NEML2 and its verification of engineering scale finite element simulations in MOOSE.

42 - ENGINEERING↗

DOE OSTI2024

Application of performance portability solutions for GPUs and many-core CPUs to track reconstruction kernels

Next generation High-Energy Physics (HEP) experiments are presented with significant computational challenges, both in terms of data volume and processing power. Using compute accelerators, such as GPUs, is one of the promising ways to provide the necessary computational power to meet the challenge. The current programming models for compute accelerators often involve using architecture-specific programming languages promoted by the hardware vendors and hence limit the set of platforms that the code can run on. Developing software with platform restrictions is especially unfeasible for HEP communities as it takes significant effort to convert typical HEP algorithms into ones that are efficient for compute accelerators. Multiple performance portability solutions have recently emerged and provide an alternative path for using compute accelerators, which allow the code to be executed on hardware from different vendors. We apply several portability solutions, such as Kokkos, SYCL, C++17 std::execution::par and Alpaka, on two mini-apps extracted from the mkFit project: p2z and p2r. These apps include basic kernels for a Kalman filter track fit, such as propagation and update of track parameters, for detectors at a fixed z or fixed r position, respectively. The two mini-apps explore different memory layout formats. We report on the development experience with different portability solutions, as well as their performance on GPUs and many-core CPUs, measured as the throughput of the kernels from different GPU and CPU vendors such as NVIDIA, AMD and Intel.

Kwok, Ka Martin↗

DOE OSTI2023

Three-dimensional magnetohydrodynamic modeling of auto-magnetizing liner implosions on the Z accelerator

Auto-magnetizing (AutoMag) liners are cylindrical tubes that employ helical current flow to produce strong internal axial magnetic fields prior to radial implosion on ~100 ns timescales. AutoMag liners have demonstrated strong uncompressed axial magnetic field production (>100 T) and remarkable implosion uniformity during experiments on the 20 MA Z accelerator. However, both axial field production and implosion morphology require further optimization to support the use of AutoMag targets in magnetized liner inertial fusion (MagLIF) experiments. Data from experiments studying the initiation and evolution of dielectric flashover in AutoMag targets on the Mykonos accelerator have enabled the advancement of magnetohydrodynamic (MHD) modeling protocols used to simulate AutoMag liner implosions. Implementing these protocols using ALEGRA has improved the comparison of simulations to radiographic data. Specifically, both the liner in-flight aspect ratio and the observed width of the encapsulant-filled helical gaps during implosion in ALEGRA simulations agree more closely with radiography data compared to previous GORGON simulations. Although simulations fail to precisely reproduce the measured internal axial magnetic field production, improved agreement with radiography data inspired the evaluation of potential design improvements with newly developed modeling protocols. Three-dimensional MHD simulation studies focused on improving AutoMag target designs, specifically seeking to optimize the axial magnetic field production and enhance the cylindrical implosion uniformity for MagLIF. Importantly, by eliminating the driver current prepulse and reducing the initial inter-helix gap widths in AutoMag liners, simulations indicate that the optimal 30–50 T range of precompressed axial magnetic field for MagLIF on Z can be accomplished concurrently with improved cylindrical implosion uniformity.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

DOE OSTI2024

Simulating the CMS High Granularity Calorimeter with ML

Detector simulation is a key component of physics analysis and related activities in CMS. In the upcoming High Luminosity LHC era, simulation will be required to use a smaller fraction of computing in order to satisfy resource constraints. At the same time, CMS will be upgraded with the new High Granularity Calorimeter (HGCal), which requires significantly more resources to simulate than the existing CMS calorimeters. This computing challenge motivates the use of generative machine learning models as surrogates to replace full physics-based simulation. We study the application of state-of-the-art diffusion models to simulate particle showers in the CMS HGCal. We will discuss methods to overcome the challenges posed by the high-dimensional, irregular geometry of the HGCal. The quality of the showers produced by the diffusion model will be assessed by comparison to the full GEANT4-based simulation. The increase in simulation throughput will be quantified and methods to accelerate the diffusion model inference will also be discussed.

Amram, Oz↗

NASA NTRS1980

Phase 2 and 3 wind tunnel tests of the J-97 powered, external augmentor V/STOL model

Modifications were made to the model to improve longitudinal acceleration capability during transition from hovering to wing borne flight. A rearward deflection of the fuselage augmentor thrust vector is shown to be beneficial in this regard. Other agmentor modifications were tested, notably the removal of both endplates, which improved acceleration performance at the higher transition speeds. The model tests again demonstrated minimal interference of the fuselage augmentor on aerodynamic lift. A flapped canard surface also shows negligible influence on the performance of the wing and of the fuselage augmentor.

Garland, D. B.↗

NASA NTRS1985

Long term variability of the cosmic ray intensity

In a previous paper Bhat, et al., assess the evidence for the continuing acceleration of cosmic rays in the Loop I supernova remnant. The enhanced gamma-ray emission is found consistent with the Blandford and Cowie model for particle acceleration at the remnant shock wave. The contributions of other supernovae remnants to the galactic cosmic ray energy density are now considered, paying anisotropy of cosmic rays accelerated by local supernovae ( 100 pc). The results are compared with geophysical data on the fluctuations in the cosmic ray intensity over the previous one billion years.

Bhat, C. L.↗

NASA NTRS1987

Earth anisotropic reflection and the orbit of LAGEOS

Radiation pressure due to sunlight anisotropically reflected from the oceans apparently cannot explain the fluctuations in the anomalous along-track deceleration of the LAGEOS satellite. It fails by about a factor of 2 to account for the major peaks in the acceleration. This result is based on an extreme model: a cloudless earth whose northern hemisphere consists of continent, and whose southern hemisphere consists of ocean. The continent is assumed to reflect sunlight according to Lambert's law, while the ocean reflects anisotropically according to a simple analytical law which mimics Nimbus 7 observations. The inclusion of clouds into the model would reduce the acceleration to perhaps an order of magnitude below those observed. Some other explanation for the fluctuations, which have magnitude about 2 x 10 to the -12th m/sec sq, must be sought.

Rubincam, David Parry↗

DOE OSTI2025

Symplectic machine learning model for fast simulation of space-charge effects

Symplectic simulation of space-charge effects is crucial for the design and operation of high-intensity particle accelerators. Traditional methods for simulating these effects are often computationally expensive, resulting in significant overhead. In this work, we introduce a generative model based on a U-Net architecture within a generative adversarial network framework to efficiently simulate space-charge effects. The model is trained to predict the transverse multiparticle space-charge Hamiltonian, which can be physically computed using a gridless spectral method. The one-step symplectic transverse transfer map for the particles is then obtained by differentiating the predicted Hamiltonian. Benchmarking results demonstrate that this generative model achieves an order of magnitude higher computational efficiency compared to the spectral method, providing a highly efficient alternative for simulating space-charge effects with a large number of particles. By maintaining symplecticity, the model effectively preserves the phase-space structure and mitigates nonphysical errors in long-term simulations. This model has been integrated into jutrack, a novel autodifferentiable accelerator modeling code developed in the julia programming language.

Beam code development & simulation techniques↗

NASA NTRS1998

Direct Acceleration of Pickup Ions at The Solar Wind Termination Shock: The Production of Anomalous Cosmic Rays

We have modeled the injection and acceleration of pickup ions at the solar wind termination shock and investigated the parameters needed to produce the observed Anomalous Cosmic Ray (ACR) fluxes. A non-linear Monte Carlo technique was employed, which in effect solves the Boltzmann equation and is not restricted to near-isotropic particle distribution functions. This technique models the injection of thermal and pickup ions, the acceleration of these ions, and the determination of the shock structure under the influence of the accelerated ions. The essential effects of injection are treated in a mostly self-consistent manner, including effects from shock obliquity, cross- field diffusion, and pitch-angle scattering. Using recent determinations of pickup ion densities, we are able to match the absolute flux of hydrogen in the ACRs by assuming that pickup ion scattering mean free paths, at the termination shock, are much less than an AU and that modestly strong cross-field diffusion occurs. Simultaneously, we match the flux ratios He(+)/H(+) or O(+)/H(+) to within a factor approx. 5. If the conditions of strong scattering apply, no pre-termination-shock injection phase is required and the injection and acceleration of pickup ions at the termination shock is totally analogous to the injection and acceleration of ions at highly oblique interplanetary shocks recently observed by the Ulysses spacecraft. The fact that ACR fluxes can be modeled with standard shock assumptions suggests that the much-discussed "injection problem" for highly oblique shocks stems from incomplete (either mathematical or computer) modeling of these shocks rather than from any actual difficulty shocks may have in injecting and accelerating thermal or quasi-thermal particles.

Ellison, Donald C.↗