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At least 649 records · Page 36

Simulations With the Marine Biogeochemistry Library (MARBL)

Abstract The Marine Biogeochemistry Library (MARBL) is a prognostic ocean biogeochemistry model that simulates marine ecosystem dynamics and the coupled cycles of carbon, nitrogen, phosphorus, iron, silicon, and oxygen. MARBL is a component of the Community Earth System Model (CESM); it supports flexible ecosystem configuration of multiple phytoplankton and zooplankton functional types; it is also portable, designed to interface with multiple ocean circulation models. Here, we present scientific documentation of MARBL, describe its configuration in CESM2 experiments included in the Coupled Model Intercomparison Project version 6 (CMIP6), and evaluate its performance against a number of observational data sets. The model simulates present‐day air‐sea CO 2 flux and many aspects of the carbon cycle in good agreement with observations. However, the simulated integrated uptake of anthropogenic CO 2 is weak, which we link to poor thermocline ventilation, a feature evident in simulated chlorofluorocarbon distributions. This also contributes to larger‐than‐observed oxygen minimum zones. Moreover, radiocarbon distributions show that the simulated circulation in the deep North Pacific is extremely sluggish, yielding extensive oxygen depletion and nutrient trapping at depth. Surface macronutrient biases are generally positive at low latitudes and negative at high latitudes. CESM2 simulates globally integrated net primary production (NPP) of 48 Pg C yr −1 and particulate export flux at 100 m of 7.1 Pg C yr −1 . The impacts of climate change include an increase in globally integrated NPP, but substantial declines in the North Atlantic. Particulate export is projected to decline globally, attributable to decreasing export efficiency associated with changes in phytoplankton community composition.

Meteorology & Atmospheric Sciences↗

A Statistical Interpolation Code for Ocean Analysis and Forecasting

Abstract We present a data assimilation package for use with ocean circulation models in analysis, forecasting, and system evaluation applications. The basic functionality of the package is centered on a multivariate linear statistical estimation for a given predicted/background ocean state, observations, and error statistics. Novel features of the package include support for multiple covariance models, and the solution of the least squares normal equations either using the covariance matrix or its inverse—the information matrix. The main focus of this paper, however, is on the solution of the analysis equations using the information matrix, which offers several advantages for solving large problems efficiently. Details of the parameterization of the inverse covariance using Markov random fields are provided and its relationship to finite-difference discretizations of diffusion equations are pointed out. The package can assimilate a variety of observation types from both remote sensing and in situ platforms. The performance of the data assimilation methodology implemented in the package is demonstrated with a yearlong global ocean hindcast with a 1/4° ocean model. The code is implemented in modern Fortran, supports distributed memory, shared memory, multicore architectures, and uses climate and forecasts compliant Network Common Data Form for input/output. The package is freely available with an open source license from www.tendral.com/tsis/ .

Srinivasan, Ashwanth↗

Reducing impacts of artificial ponding in modeling salt marshes using a conductivity-formulated subgrid model

The landforms of salt marsh systems are rather complex, with meandering channel networks cutting through low-lying, extensive marsh platforms. Some small-scale topographic details are critical to flooding and draining processes but cannot be reflected in the Digital Elevation Model (DEM) due to limited measurement resolution and vegetation bias. Numerical models need a grid with high enough resolution to capture the small-scale connectivity to correctly model the small-scale flow processes, making the model computationally unaffordable. Here, in this study, we derived a subgrid model, which couples two flow components, one is the regular subgrid model for simulating the subgrid-resolved flows, and the other is a conductivity-formulated porous flow model for modeling small-scale gut flows unresolved at the subgrid level. The model validation was performed using an idealized case with a narrow slot that was unresolved in the coupled flow model. Model results were compared with a slot-resolved regular subgrid model where only surface flows are solved and suggested that, with a proper model parameterization, the coupled flow model is capable of reproducing flooding and draining processes similar to the slot-resolved subgrid model of surface flow. The model was applied to simulating flooding and draining processes in a meso-tidal salt marsh. The model results demonstrate that the coupled subgrid model can be used to reduce the impacts of artificial ponding that usually occur in numerical simulations of salt marshes with numerous narrow gullies and creeks.

54 ENVIRONMENTAL SCIENCES↗

Non-seasonal Gravitational Effects of Interannual Meteorological Oscillations in Atmosphere and Ocean

Via mass transport, the interannual meteorological oscillations (ENSO, NAO, etc.) produce slight variations in the global gravitational field, which can be observed by satellite laser ranging (SLR) and anticipated space missions such as GRACE. The meteorological oscillation modes are identified using empirical orthogonal function and principal component decomposition using de-seasoned surface fields produced from the 40-years of NCEP reanalysis. This decompositional analysis requires an accounting for issues associated with area-weighting and non-zero mean. The atmospheric contributions to gravitational variation, mode by mode and in combinations, are then computed via regional integration. To address the corresponding oceanic contributions, we examine the output of the numerical POCM ocean circulation model (1992-1998) in two ways: ocean bottom pressure field and ocean surface topography minus steric effect. The resulting lowest-degree Stokes coefficients for both NCEP reanalysis and POCM are then compared with space geodetic SLR observations, to identify the importance of each meteorological oscillations in gravitational variation signals.

Chao, Benjamin F.↗

Near grazing scattering from non-Gaussian ocean surfaces

We investigate the behavior of the scattered electromagnetic waves from non-Gaussian ocean surfaces at near grazing incidence. Even though the scattering mechanisms at moderate incidence angles are relatively well understood, the same is not true for near grazing rough surface scattering. However, from the experimental ocean scattering data, it has been observed that the backscattering cross section of a horizontally polarized wave can be as large as the vertical counterpart at near grazing incidence. In addition, these returns are highly intermittent in time. There have been some suggestions that these unexpected effects may come from shadowing or feature scattering. Using numerical scattering simulations, it can be shown that the horizontal backscattering cannot be larger than the vertical one for the Gaussian surfaces. Our main objective of this study is to gain a clear understanding of scattering mechanisms underlying the near grazing ocean scattering. In order to evaluate the backscattering cross section from ocean surfaces at near grazing incidence, both the hydrodynamic modeling of ocean surfaces and an accurate near grazing scattering theory are required. For the surface modeling, we generate Gaussian surfaces from the ocean surface power spectrum which is derived using several experimental data. Then, weakly nonlinear large scale ocean surfaces are generated following Longuet-Higgins. In addition, the modulation of small waves by large waves is included using the conservation of wave action. For surface scattering, we use MOM (Method of Moments) to calculate the backscattering from scattering patches with the two scale shadowing approximation. The differences between Gaussian and non-Gaussian surface scattering at near grazing incidence are presented.

Kim, Yunjin↗

Lunar Magma Ocean Crystallization: Constraints from Fractional Crystallization Experiments

The currently accepted paradigm of lunar formation is that of accretion from the ejecta of a giant impact, followed by crystallization of a global scale magma ocean. This model accounts for the formation of the anorthosite highlands crust, which is globally distributed and old, and the formation of the younger mare basalts which are derived from a source region that has experienced plagioclase extraction. Several attempts at modelling the crystallization of such a lunar magma ocean (LMO) have been made, but our ever-increasing knowledge of the lunar samples and surface have raised as many questions as these models have answered. Geodynamic models of lunar accretion suggest that shortly following accretion the bulk of the lunar mass was hot, likely at least above the solidus]. Models of LMO crystallization that assume a deep magma ocean are therefore geodynamically favorable, but they have been difficult to reconcile with a thick plagioclase-rich crust. A refractory element enriched bulk composition, a shallow magma ocean, or a combination of the two have been suggested as a way to produce enough plagioclase to account for the assumed thickness of the crust. Recently however, geophysical data from the GRAIL mission have indicated that the lunar anorthositic crust is not as thick as was initially estimated, which allows for both a deeper magma ocean and a bulk composition more similar to the terrestrial upper mantle. We report on experimental simulations of the fractional crystallization of a deep (approximately 100km) LMO with a terrestrial upper mantle-like (LPUM) bulk composition. Our experimental results will help to define the composition of the lunar crust and mantle cumulates, and allow us to consider important questions such as source regions of the mare basalts and Mg-suite, the role of mantle overturn after magma ocean crystallization and the nature of KREEP

Rapp, J. F.↗

Contrasting Indian Ocean SST Variability With and Without ENSO Influence: A Coupled Atmosphere-Ocean GCM Study

In this study, we perform experiments with a coupled atmosphere-ocean general circulation model (CGCM) to examine ENSO's influence on the interannual sea surface temperature (SST) variability of the tropical Indian Ocean. The control experiment includes both the Indian and Pacific Oceans in the ocean model component of the CGCM (the Indo-Pacific Run). The anomaly experiment excludes ENSOs influence by including only the Indian Ocean while prescribing monthly-varying climatological SSTs for the Pacific Ocean (the Indian-Ocean Run). In the Indo-Pacific Run, an oscillatory mode of the Indian Ocean SST variability is identified by a multi-channel singular spectral analysis (MSSA). The oscillatory mode comprises two patterns that can be identified with the Indian Ocean Zonal Mode (IOZM) and a basin-wide warming/cooling mode respectively. In the model, the IOZM peaks about 3-5 months after ENSO reaches its maximum intensity. The basin mode peaks 8 months after the IOZM. The timing and associated SST patterns suggests that the IOZM is related to ENSO, and the basin- wide warming/cooling develops as a result of the decay of the IOZM spreading SST anomalies from western Indian Ocean to the eastern Indian Ocean. In contrast, in the Indian-Ocean Run, no oscillatory modes can be identified by the MSSA, even though the Indian Ocean SST variability is characterized by east-west SST contrast patterns similar to the IOZM. In both control and anomaly runs, IOZM-like SST variability appears to be associated with forcings from fluctuations of the Indian monsoon. Our modeling results suggest that the oscillatory feature of the IOZM is primarily forced by ENSO.

Yu, Jin-Yi↗

Bidirectional reflectance of oceanic waters: A comparison of modeled and measured upward radiance fields

The bidirectional reflectance of oceanic waters is conveniently described in a normalized way by forming the ratio of the upwelling irradiance E(sub u) to any upwelling radiance L(sub u)(theta prime, phi). This ratio, Q (theta prime, theta(sub 0), (phi(sub 0) - phi), where theta prime, phi are the nadir and azimuth angles for the upward radiance and theta(sub 0), phi(sub 0) are the zenith and azimuth angles of the Sun, has been determined from measurements at sea and computed via Monte Carlo simulations using the inherent optical properties measured in the field and appropriate boundary conditions (clear sky, no wind, varying Sun angle). Experimental ad computed Q values are in excellent agreement. This successful comparison confirms the importance of the bidirectional character of ocean reflectance, already pointed out from a purely numerical approach without field validation, and corroborates the extended range of the Q variations. The later point is of importance when interpreting the marine signals detected by an ocean color satellite-borne sensor. The validation is extended by considering the historical data for the radiance distributions in Lake Pend Oreille determined at various depths. The closure issue in ocean optics is examined by solving the direct problem of radiative transfer and through a model-data comparison in terms of radiance field.

Morel, Andre↗

Improvement of TOPEX/POSEIDON and Jason-1 Geophysical Data Record for Global Change Studies and Coastal Applications

The Earth's modem climate change has been characterized by interlinked changes in temperature, CO2, ice sheets and sea level. Global sea level change is a critical indicator for study of contemporary climate change. Sea level rise appears to have accelerated since the ice sheet retreats have stopped some 5000 years ago and it is estimated that the sea level rise has been approx. 15 cm over the last century. Contemporary radar altimeters represent the only technique capable of monitoring global sea level change with accuracy approaching 1 mm/yr and with a temporal scale of days and a spatial scale of 100 km or longer. This report highlights the major accomplishments of the TOPEX/POSEIDON (T/P) Extended Mission and Jason-1 science investigation. The primary objectives of the investigation include the calibration and improvement of T/P and Jason-1 altimeter data for global sea level change and coastal tide and circulation studies. The scientific objectives of the investigation include: (1) the calibration and improvement of T/P and Jason-1 data as a reference measurement system for the accurate cross-linking with other altimeter systems (Seasat, Geosat, ERS-1, ERS-2, GFO-1, and Envisat), (2) the improved determination and the associated uncertainties of the long-term (15-year) global mean sea level change using multiple altimeters, (3) the characterization of the sea level change by analyses of independent data, including tide gauges, sea surface temperature, and (4) the improvement coastal radar altimetry for studies including coastal ocean tide modeling and coastal circulation. Major accomplishments of the investigation include the development of techniques for low-cost radar altimeter absolute calibration (including the associated GPS-buoy technology), coastal ocean tide modeling, and the linking of multiple altimeter systems and the resulting determination of the 15-year (1985-1999) global mean sea level variations. The current rate of 15-year sea level rise observed by multiple satellite altimetry is +2.3 +/- 1.2 mm/yr, which is in general agreement with the analysis of sparsely distributed tide gauge measurements for the same data span, and represents the first such determination of sea level change in its kind.

Shum, C. K.↗

A practical method for modeling temporally-averaged ocean wave frequency-directional spectra for characterizing wave energy climates

Wave energy resource characterization investigations have been hindered because frequency-directional wave spectra are not broadly available for many coastal regions due to the insufficient spatial coverage of buoy observation networks and spectral wave model hindcast outputs. We address this problem by developing and validating a practical method for approximating temporally-averaged frequency-directional wave spectra averaged over periods of months or years from bulk wave parameters, which are available at a much greater coverage and resolution than frequency-directional wave spectra. While the temporally averaged frequency-directional wave spectrum over these periods cannot be used for analyzing a single sea state, it aggregates multiple sea states, identifies dominant wave energy systems representing wave climate, and resolves their spectral characteristics. Therefore, modelling temporally averaged frequency-directional wave spectra is of great value for planning and designing wave energy projects, e.g., resource characterization, site assessment, and conceptual design of wave energy converters. Temporally-averaged frequency-directional wave spectra and related important wave energy parameters approximated using this method are found to be more accurate than commonly used parametric wave spectrum models. This method can be applied to a wide range of wave climates given its universality and high accuracy. Also, the availability of bulk wave parameters from multi-decade high-resolution wave model hindcasts is increasing.

16 TIDAL AND WAVE POWER↗

Ocean Turbulence V: Mesoscale Modeling in Level Coordinates. The Effect of Random Nature of Density

The main result of this paper is the derivation of a new expression for the tracer subgrid term in level coordinates S(l) to be employed in O-GCM. The novel feature is the proper account of the random nature of the density field which strongly affects the transformation from isopycnal to level coordinates of the variables of interest, velocity and tracer fields, their correlation functions and ultimately the subgrid terms. In deriving our result we made use of measured properties of vertical ocean turbulence. The major new results are: 1) the new subgrid expression is different from that of the heuristic GM model, 2) u++(tracer)=1/2u+(thickness), where u++ and u+ are the tracer and thickness bolus velocities. In previous models, u++ = u+, 2) the subgrid for a tracer tau is not the same as that for the density rho even when one accounts for the obvious absence of a diffusion term in the latter. The difference stems from a new treatment of the stochastic nature of the density, 3) the mesoscale diffusivity enters both locally and non-locally, as the integral over all z's from the bottom of the ocean to the level z.

Canuto, V. M.↗

Mechanisms of interannual ocean-atmosphere interactions

Results of an investigation to study the interaction between ocean and atmosphere on the annual to decadal time scale are reported. Separate studies of the ocean response to atmospheric forcing, and of atmospheric response to ocean forcing were also conducted. The main findings are the dynamics of sea surface temperature anomalies, the role of short time scale weather fluctuations in the seasonal cycle of the upper ocean variability, and the planetary wave response to sea surface temperature anomalies. A numerical model of the ocean atmosphere continent system and a two layer quasi-geostropic ocean model is discussed.

Frankignoul, C.↗

Optimization of Ocean Color Algorithms: Application to Satellite Data Merging

The objective of our program is to develop and validate a procedure for ocean color data merging which is one of the major goals of the SIMBIOS project. The need for a merging capability is dictated by the fact that since the launch of MODIS on the Terra platform and over the next decade, several global ocean color missions from various space agencies are or will be operational simultaneously. The apparent redundancy in simultaneous ocean color missions can actually be exploited to various benefits. The most obvious benefit is improved coverage. The patchy and uneven daily coverage from any single sensor can be improved by using a combination of sensors. Beside improved coverage of the global Ocean the merging of Ocean color data should also result in new, improved, more diverse and better data products with lower uncertainties. Ultimately, ocean color data merging should result in the development of a unified, scientific quality, ocean color time series, from SeaWiFS to NPOESS and beyond. Various approaches can be used for ocean color data merging and several have been tested within the frame of the SIMBIOS program. As part of the SIMBIOS Program, we have developed a merging method for ocean color data. Conversely to other methods our approach does not combine end-products like the subsurface chlorophyll concentration (chl) from different sensors to generate a unified product. Instead, our procedure uses the normalized water-leaving radiances (L(sub WN)(lambda)) from single or multiple sensors and uses them in the inversion of a semi-analytical ocean color model that allows the retrieval of several ocean color variables simultaneously. Beside ensuring simultaneity and consistency of the retrievals (all products are derived from a single algorithm), this model-based approach has various benefits over techniques that blend end-products (e.g. chlorophyll): 1) it works with single or multiple data sources regardless of their specific bands, 2) it exploits band redundancies and band differences, 3) it accounts for uncertainties in the (L(sub WN)(lambda)) data and, 4) it provides uncertainty estimates for the retrieved variables.

Maritorena, Stephane↗

Optimization Of Ocean Color Algorithms: Application To Satellite And In Situ Data Merging

The objective of our program is to develop and validate a procedure for ocean color data merging which is one of the major goals of the SIMBIOS project (McClain et al., 1995). The need for a merging capability is dictated by the fact that since the launch of MODIS on the Terra platform and over the next decade, several global ocean color missions from various space agencies are or will be operational simultaneously. The apparent redundancy in simultaneous ocean color missions can actually be exploited to various benefits. The most obvious benefit is improved coverage (Gregg et al., 1998; Gregg & Woodward, 1998). The patchy and uneven daily coverage from any single sensor can be improved by using a combination of sensors. Beside improved coverage of the global ocean the merging of ocean color data should also result in new, improved, more diverse and better data products with lower uncertainties. Ultimately, ocean color data merging should result in the development of a unified, scientific quality, ocean color time series, from SeaWiFS to NPOESS and beyond. Various approaches can be used for ocean color data merging and several have been tested within the frame of the SIMBIOS program (see e.g. Kwiatkowska & Fargion, 2003, Franz et al., 2003). As part of the SIMBIOS Program, we have developed a merging method for ocean color data. Conversely to other methods our approach does not combine end-products like the subsurface chlorophyll concentration (chl) from different sensors to generate a unified product. Instead, our procedure uses the normalized waterleaving radiances (LwN( )) from single or multiple sensors and uses them in the inversion of a semianalytical ocean color model that allows the retrieval of several ocean color variables simultaneously. Beside ensuring simultaneity and consistency of the retrievals (all products are derived from a single algorithm), this model-based approach has various benefits over techniques that blend end-products (e.g. chlorophyll): 1) it works with single or multiple data sources regardless of their specific bands, 2) it exploits band redundancies and band differences, 3) it accounts for uncertainties in the LwN( ) data and, 4) it provides uncertainty estimates for the retrieved variables.

Maritorena, Stephane↗

Optimization of Ocean Color Algorithms: Application to Satellite Data Merging

The objective of the program is to develop and validate a procedure for ocean color data merging, which is one of the major goals of the SIMBIOS project. As part of the SIMBIOS Program, we have developed a merging method for ocean color data. Conversely to other methods our approach does not combine end-products like the subsurface chlorophyll concentration (chl) from different sensors to generate a unified product. Instead, our procedure uses the normalized water-leaving radiances L((sub wN)(lambda)) from single or multiple sensors and uses them in the inversion of a semi-analytical ocean color model that allows the retrieval of several ocean color variables simultaneously. Beside ensuring simultaneity and consistency of the retrievals (all products are derived from a single algorithm), this model-based approach has various benefits over techniques that blend end-products (e.g. chlorophyll): 1) It works with single or multiple data sources regardless of their specific bands; 2) It exploits band redundancies and band differences; 3) It accounts for uncertainties in the L((sub wN)(lambda)) data; 4) It provides uncertainty estimates for the retrieved variables.

Ritorena, Stephane↗

Diurnal and semidiurnal variations in Earth orientation determined from LAGEOS laser ranging

Variations in universal time and polar motion due to ocean tides at nearly diurnal and nearly semidiurnal frequencies are determined from analysis of laser ranging to the LAGEOS satellite over the period from 1987 to 1992. The adjusted diurnal tides were K(sub 1), S(sub 1), P(sub 1), O(sub 1), and Q(sub 1), while the semidiurnal tides were K(sub 2), S(sub 2), M(sub 2), and N(sub 2). A formulation was used that explicitly separated prograde and retrograde terms in the polar motion in order to eliminate aliasing from the singularity of retrograde wobble with long period orbit error and nutation. The results are compared to other experimentally derived observations from very long baseline interferometry (VLBI) and with predictions from an ocean tide model. The results of this study were well with those from the VLBI studies, typically at the 2-3 microsecond level in universal time and 30-50 microarc sec (muas) level in polar motion. The agreement with predictions from the ocean tide model were roughly a factor of 3 worse for UT although better for polar motion, particularly in the diurnal band.

Watkins, Michael M.↗

Ocean-Science Mission Needs: Real-Time AUV Data for Command, Control, and Model Inputs

Predictive models for tides, hydrodynamics, and bio-optical properties affecting the visibility and buoyancy of coastal waters are needed to evaluate the safety of personnel and equipment engaged in maritime operations under potentially hazardous conditions. Predicted currents can be markedly different for two-layer systems affected by terrestrial runoff than for well-mixed conditions because the layering decouples the surface and bottom Ekman layers and rectifies the current response to oscillatory upwelling-and downwelling-favorable winds. Standard ocean models (e.g. Princeton Ocean Model) require initial-and boundary data on the physical and optical properties of the multilayered water column to provide accurate simulations of heat budgets and circulation. Two observational systems are designed to measure vertically structured conditions on the West Florida Shelf (WFS): a tethered buoy network and an autonomous underwater vehicle (AUV) observational system. The AUV system is described with a focus on the observational systems that challenge or limit the communications command and control network for various types of measurement programs. These include vertical oscillatory missions on shelf transects to observe the optical and hydrographic properties of the water column, and bottom-following missions for measuring the bottom albedo. Models of light propagation, absorption, and conversion to heat as well as determination of the buoyancy terms for physical models require these measurements. High data rates associated with video bottom imagery are the most challenging for the real-time, command and control communications system, but they are met through a combination of loss-less and lossy data-compression methods, depending upon the data-rate of the radio links.

Carder, Kendall L.↗