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At least 649 records · Page 36

Comparing variability in diagnosis of upper respiratory tract infections in patients using syndromic, next generation sequencing, and PCR-based methods

Early and accurate diagnosis of respiratory pathogens and associated outbreaks can allow for the control of spread, epidemiological modeling, targeted treatment, and decision making–as is evident with the current COVID-19 pandemic. Many respiratory infections share common symptoms, making them difficult to diagnose using only syndromic presentation. Yet, with delays in getting reference laboratory tests and limited availability and poor sensitivity of point-of-care tests, syndromic diagnosis is the most-relied upon method in clinical practice today. Here, we examine the variability in diagnostic identification of respiratory infections during the annual infection cycle in northern New Mexico, by comparing syndromic diagnostics with polymerase chain reaction (PCR) and sequencing-based methods, with the goal of assessing gaps in our current ability to identify respiratory pathogens. Of 97 individuals that presented with symptoms of respiratory infection, only 23 were positive for at least one RNA virus, as confirmed by sequencing. Whereas influenza virus (n = 7) was expected during this infection cycle, we also observed coronavirus (n = 7), respiratory syncytial virus (n = 8), parainfluenza virus (n = 4), and human metapneumovirus (n = 1) in individuals with respiratory infection symptoms. Four patients were coinfected with two viruses. In 21 individuals that tested positive using PCR, RNA sequencing completely matched in only 12 (57%) of these individuals. Few individuals (37.1%) were diagnosed to have an upper respiratory tract infection or viral syndrome by syndromic diagnostics, and the type of virus could only be distinguished in one patient. Thus, current syndromic diagnostic approaches fail to accurately identify respiratory pathogens associated with infection and are not suited to capture emerging threats in an accurate fashion. We conclude there is a critical and urgent need for layered agnostic diagnostics to track known and unknown pathogens at the point of care to control future outbreaks.

60 APPLIED LIFE SCIENCES↗

Geophysical Methods for Stratigraphic Identification

The goal of this work is to identify geophysical methods that can be used to delineate (in 3D) a large-scale paleochannel that has been inferred to exist between the 200 West and 200 East Areas of the Hanford Site’s Central Plateau . This paleochannel is of particular importance because it will significantly impact flow and contaminant transport from 200 West to 200 East. Its high permeability can both accelerate contaminant transport and lower contaminant concentrations through spreading. Information about the spatial extent and structure of such features is needed to inform subsurface flow and contaminant transport models that support remedy decisions at Hanford.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Conceptual Design of Pulverized Coal Electricity Generating Units for Flexible Operation

This National Energy Technology Laboratory (NETL) study addresses the conceptual design of greenfield pulverized coal (PC) plants intended for flexible rather than high capacity factor baseload operation. The United States has plentiful, low-cost natural gas resources - studies of aggressive decarbonization scenarios of the US energy sector suggest that the variability of carbon-free power can be economically addressed using dispatchable natural gas-fueled generation. Globally, natural gas resources are not as plentiful or low cost; consequently, some regions of the world are anticipated to continue to rely upon coal generation, even as they pursue decarbonization efforts. To support the increased utilization of variable renewable generation in these coal-dependent regions, plant designs must target low-capacity factor coal plants with increased emphasis on flexibility attributes such as start-up times, ramp rates, minimum load, and part-load heat rates. While much work has been performed on the improvement of the flexibility for existing coal plants originally designed for baseload service, little public literature exists on clean sheet design for flexible operation. This conceptual design study aims to define the features, performance characteristics, and costs for greenfield coal plants intended for flexible operation. Quantifying these characteristics provides critical information required by utility owners, grid planners, energy market modelers, and energy policy decision makers in coal-dependent regions of the world to better understand how coal-fired power plants can support a transition to low carbon generation.

20 FOSSIL-FUELED POWER PLANTS↗

Rock Valley Dense Gravity Acquisition

Characterizing the shallow structure of the Rock Valley region of the Nevada National Security Site is a critical component of the Rock Valley Direct Comparison project. Geophysical data of the region is needed for operational decisions, to constrain geologic models used for simulation, and to facilitate the analysis of future explosive source data. Local measurements of gravity are a key piece of geophysical information that helps to resolve the underlying geologic composition, fault structure, and density characteristics, yet, in the Rock Valley region these measurements are sparse on the scale of the testbed. In this report, we present the details of a recent gravity data acquisition survey designed to collect a dense dataset in the region of interest that complements the existing gravity work but greatly enhances our resolution. This dataset will be integrated with a complementary Los Alamos National Laboratory gravity collection and combined with the existing seismic data in a joint inversion. These measurements were conducted over two weeks with a portable gravimeter and high-resolution GPS and include repeat measurements at a USGS base station as well as reoccupation of gravity sites in the regional dataset. This collection of over 100 new dense gravity measurements will facilitate refinement of the existing Geologic Framework Model and directly complement newly acquired dense seismic data, ultimately improving the project’s ability to investigate the direct comparison of shallow earthquake and explosive sources.

58 GEOSCIENCES↗

Joint modeling of water and energy for resilience and flexibility

This white paper addresses the intersection of energy and water resources for potable water, considering energy-for-water through joint systems modeling. Specifically, we focus on the opportunities to promote joint resilience in water and power systems through coupled modeling to inform decision-makers.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗

Flexible and Accessible 4D Subsurface Visualization Using a Web-Based Platform

4D subsurface visualization using a web platform can provide improved communication, education and outreach to non-experts and stakeholders. It allows for the improved understanding of complex relationships and interactions that occur in inaccessible locations of which many experimental testbeds exist in. The use of a web-based visualization tool lessens the cognitive impact further by reducing the need of specialized software. Users can define their own exploration of a 3D or 4D scene, adding and removing data as needed and are able to make informed decisions based on accurate model visualizations, while providing a collaborative tool that can be accessed on any platform using a browser window. The tool is also able to point to real time streams to display up-to-the-second data as an experiment is ongoing. This level of latency can also provide operators with essential information that can direct an experiment’s progress. Additionally, this tool can leverage augmented and virtual reality (AR, VR) capabilities of certain mobile devices and head-mounted displays, providing further engaging visualization possibilities.

Pratt, Martin J.↗

Design representation and consistency maintenance needs

Two major issues of data base support for large-scale engineering design are considered. The first deals with the need to support multidisciplinary, hierarchical and interactive design without imposing a priori constraints on the sequence of design decisions. An abstract logical model of the data base capable of such support is outlined. The second issue deals with the role the data base must play in maintaining integrity and consistency among the data representing the emerging design. A tentative model implementing a number of consistency management functions is presented.

Eastman, C. M.↗

Composite model of a 3-D image

This paper presents a composite model of a moving (3-D) image especially useful for the sequential image processing and encoding. A non-linear predictor based on the composite model is described. The performance of this predictor is used as a measure of the validity of the model for a real image source. The minimization of a total mean square prediction error provides an inequality which determines a condition for the profitable use of the composite model and can serve as a decision device for the selection of the number of subsources within the model. The paper also describes statistical properties of the prediction error and contains results of computer simulation of two non-linear predictors in the case of perfect classification between subsources.

Dukhovich, I. J.↗

Development of a comprehensive analysis for rotorcraft. I - Rotor model and wake analysis

The development of a comprehensive analytical model of rotorcraft aerodynamics and dynamics is described. Particular emphasis is given to describing the reasons behind the choices and decisions involved in constructing the model. The analysis is designed to calculate rotor performance, loads and noise; helicopter vibration and gust response; flight dynamics and handling qualities; and system aeroelastic stability. It is intended for use in the design, testing and evaluation of a wide class of rotors and rotorcraft, and to be the basis for further development of rotary wing theories. The general characteristics of the geometric, structural, inertial, and aerodynamic models used for the rotorcraft components are described, including the assumptions introduced by the chosen models and the resulting capabilities and limitations. Finally, some examples from recent applications of the analysis are given.

Johnson, W.↗

Development of a comprehensive analysis for rotorcraft. II - Aircraft model, solution procedure and applications

The development of a comprehensive analytical model of rotorcraft aerodynamics and dynamics is described. Particular emphasis is given to describing the reasons behind the choices and decisions involved in constructing the model. The analysis is designed to calculate rotor performance, loads and noise; helicopter vibration and gust response; flight dynamics and handling qualities; and system aeroelastic stability. It is intended for use in the design, testing and evaluation of a wide class of rotors and rotorcraft and to be the basis for further development of rotary wing theories. The general characteristics of the geometric, structural, inertial and aerodynamic models used for the rotorcraft components are described, including the assumptions introduced by the chosen models and the resulting capabilities and limitations. Finally, some examples from recent applications of the analysis are given.

Johnson, W.↗

Steady-state evoked potentials possibilities for mental-state estimation

The use of the human steady-state evoked potential (SSEP) as a possible measure of mental-state estimation is explored. A method for evoking a visual response to a sum-of-ten sine waves is presented. This approach provides simultaneous multiple frequency measurements of the human EEG to the evoking stimulus in terms of describing functions (gain and phase) and remnant spectra. Ways in which these quantities vary with the addition of performance tasks (manual tracking, grammatical reasoning, and decision making) are presented. Models of the describing function measures can be formulated using systems engineering technology. Relationships between model parameters and performance scores during manual tracking are discussed. Problems of unresponsiveness and lack of repeatability of subject responses are addressed in terms of a need for loop closure of the SSEP. A technique to achieve loop closure using a lock-in amplifier approach is presented. Results of a study designed to test the effectiveness of using feedback to consciously connect humans to their evoked response are presented. Findings indicate that conscious control of EEG is possible. Implications of these results in terms of secondary tasks for mental-state estimation and brain actuated control are addressed.

Junker, Andrew M.↗

An application of fuzzy sets in real time filtering problems

The human decision-making task is modeled with fuzzy sets and the Kalman filter updates to the state vector are weighted using fuzzy functions. Results of the study show that the use of fuzzy set models gives results comparable to those requiring human assistance, e.g. lock on to false targets, and better results when the problem is caused by noise and/or bias, or unexpected errors in the state vector at initial acquisition.

Lea, Robert N.↗

Lunar exploration for resource utilization

The strategy for developing resources on the Moon depends on the stage of space industrialization. A case is made for first developing the resources needed to provide simple materials required in large quantities for space operations. Propellants, shielding, and structural materials fall into this category. As the enterprise grows, it will be feasible to develop additional sources - those more difficult to obtain or required in smaller quantities. Thus, the first materials processing on the Moon will probably take the abundant lunar regolith, extract from it major mineral or glass species, and do relatively simple chemical processing. We need to conduct a lunar remote sensing mission to determine the global distribution of features, geophysical properties, and composition of the Moon, information which will serve as the basis for detailed models of and engineering decisions about a lunar mine.

Duke, Michael B.↗

Technologies for automating rotorcraft nap-of-the-earth flight

This paper discusses the technologies required for automating rotorcraft nap-of-the-earth flight, where the use of natural obstacles for masking from the enemy is intentional and the danger of undesirable obstacles such as enemy traps is real. Specifically, the automatic guidance structure is modeled by three decision-making levels: the far-field mission planning and the mid-field terrain-masking trajectory shaping are both driven by prestored terrain data, whereas the nearfield obstacle detection/avoidance is driven by real-time on-board sensor data. This paper summarizes the far-field and mid-field accomplishments, and reports on the status of the more-recent efforts in obstacle detection and avoidance development. Obstacle detection is based primarily on passive imaging sensors for the desirable properties of covertness and wide field of view, although active sensors are included in the structure to provide the much needed high resolution for thin-wire detection.

Cheng, Victor H. L.↗

A Cost and Performance System (CAPS) in a Federal agency

Cost and Performance System (CAPS) is an automated system used from the planning phase through implementation to analysis and documentation. Data is retrievable or available for analysis of cost versus performance anomalies. CAPS provides a uniform system across intra- and international elements. A common system is recommended throughout an entire cost or profit center. Data can be easily accumulated and aggregated into higher levels of tracking and reporting of cost and performance.The level and quality of performance or productivity is indicated in the CAPS model and its process. The CAPS model provides the necessary decision information and insight to the principal investigator/project engineer for a successful project management experience. CAPS provides all levels of management with the appropriate detailed level of data.

Huseonia, W. F.↗

Research Initiatives and Preliminary Results In Automation Design In Airspace Management in Free Flight

The NASA and the FAA have entered into a joint venture to explore, define, design and implement a new airspace management operating concept. The fundamental premise of that concept is that technologies and procedures need to be developed for flight deck and ground operations to improve the efficiency, the predictability, the flexibility and the safety of airspace management and operations. To that end NASA Ames has undertaken an initial development and exploration of "key concepts" in the free flight airspace management technology development. Human Factors issues in automation aiding design, coupled aiding systems between air and ground, communication protocols in distributed decision making, and analytic techniques for definition of concepts of airspace density and operator cognitive load have been undertaken. This paper reports the progress of these efforts, which are not intended to definitively solve the many evolving issues of design for future ATM systems, but to provide preliminary results to chart the parameters of performance and the topology of the analytic effort required. The preliminary research in provision of cockpit display of traffic information, dynamic density definition, distributed decision making, situation awareness models and human performance models is discussed as they focus on the theme of "design requirements".

Corker, Kevin↗

Robust Combining of Disparate Classifiers Through Order Statistics

Integrating the outputs of multiple classifiers via combiners or meta-learners has led to substantial improvements in several difficult pattern recognition problems. In this article we investigate a family of combiners based on order statistics, for robust handling of situations where there are large discrepancies in performance of individual classifiers. Based on a mathematical modeling of how the decision boundaries are affected by order statistic combiners, we derive expressions for the reductions in error expected when simple output combination methods based on the the median, the maximum and in general, the ith order statistic, are used. Furthermore, we analyze the trim and spread combiners, both based on linear combinations of the ordered classifier outputs, and show that in the presence of uneven classifier performance, they often provide substantial gains over both linear and simple order statistics combiners. Experimental results on both real world data and standard public domain data sets corroborate these findings.

Tumer, Kagan↗