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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 649 records · Page 36
All sourcesNASA NTRSDOE OSTI
DOE OSTI2022

GENESPACE tracks regions of interest and gene copy number variation across multiple genomes

The development of multiple chromosome-scale reference genome sequences in many taxonomic groups has yielded a high-resolution view of the patterns and processes of molecular evolution. Nonetheless, leveraging information across multiple genomes remains a significant challenge in nearly all eukaryotic systems. These challenges range from studying the evolution of chromosome structure, to finding candidate genes for quantitative trait loci, to testing hypotheses about speciation and adaptation. Here, we present GENESPACE, which addresses these challenges by integrating conserved gene order and orthology to define the expected physical position of all genes across multiple genomes. We demonstrate this utility by dissecting presence–absence, copy-number, and structural variation at three levels of biological organization: spanning 300 million years of vertebrate sex chromosome evolution, across the diversity of the Poaceae (grass) plant family, and among 26 maize cultivars. The methods to build and visualize syntenic orthology in the GENESPACE R package offer a significant addition to existing gene family and synteny programs, especially in polyploid, outbred, and other complex genomes.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2022

Corresponding Standard Reference Material Data used in Partial Least Squares Regression Models for Sugar Composition Estimates in Biomass in: Economic Impact of Yield and Composition Variation in Bioenergy Crops: Populus trichocarpa

Corresponding Standard Reference Material Data used in Partial Least Squares Regression Models for Sugar Composition Estimates in Biomass in: Economic Impact of Yield and Composition Variation in Bioenergy Crops: Populus trichocarpa (for corresponding manuscript: DOI: 10.1002/bbb.2148) PDF Files: Images of 1H NMR spectra for neutralized 2-stage acid hydrolysates of 4 NIST Standard Reference Material biomass samples (Monterey Pine 8493, Sugarcane Bagasse 8491, Wheat Straw 8494, and Eastern Cottonwood/Poplar 8492) and 2 Center for Bioenergy Innovation reference biomass samples (Poplar - Populus trichocarpa and Switchgrass - Panicum Virgatum). Suppression of the water peak was achieved using a NOESY-1D with presaturation, a recycle delay of 5 s, and a total of 64 scans. Spectra were acquired at 298 K and processed with automatic phase correction, baseline correction, and chemical shift referencing to TSP-d4. Images show all 1H data from 10 to 1ppm with inset spectra of region of interest (4.0 to 3.1 ppm). Text Files: Spectra for neutralized 2-stage acid hydrolysates of 4 NIST Standard Reference Material biomass samples (Monterey Pine 8493, Sugarcane Bagasse 8491, Wheat Straw 8494, and Eastern Cottonwood/Poplar 8492) and 2 Center for Bioenergy Innovation reference biomass samples (Poplar - Populus trichocarpa and Switchgrass - Panicum Virgatum) were converted into text files for plotting. Files contain 8192 points of raw spectral data from 12.23 to -2.78 ppm. The text file contains 4 columns of data and includes: Point number, Intensity, Hz, and ppm. Xcel Spreadsheet: HPLC measured monomeric sugar concentrations and bucketed 1H NMR data used to build monomeric sugar composition prediction models. Sugar composition in biomass determined from HPLC analyses are given in mg sugar/mg of biomass. Spectral bucketing was performed using Bruker’s AMIX software. Spectra were divided into 0.005 ppm buckets in the region of 3.10– 4.15 ppm for a total of 210 buckets. Headers for the bucketed data are the chemical shift in ppm of the center of the bucket. Bucketed data was used to build partial least squares models for subsequent predictions in The Unscrambler v. 10.5(CAMO A/S, Trondheim, Norway). The formation of methanol during hydrolysis interferes with the quantitative NMR analysis of sugars, so the methanol peak centered at 3.37 ppm and spanning four buckets (3.2925 – 3.2775 ppm) was set to zero for all spectra.

09 BIOMASS FUELS↗
DOE OSTI2020

Algae cultivation systems and methods adapted for weather variations

Algae cultivation systems and methods account for weather variations that can affect algae cultivation. In one system, an open raceway algae cultivation system includes a channel having a high section and a low liquid collection section. The channel is sloped to allow substantially all of an algae cultivation fluid in the high section to flow downwardly into the low liquid collection section. A barrier is removably positioned in the high section and a drain is positioned in the high section such that, when substantially all of the algae cultivation fluid has collected in the low liquid collection section, any rainwater that falls in the high section flows into the drain, without the rainwater mixing with the algae cultivation fluid in the low liquid collection section.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2020

Achieving balanced execution through runtime detection of performance variation

Systems, apparatuses, and methods for achieving balanced execution in a multi-node cluster through runtime detection of performance variation are described. During a training phase, performance counters and an amount of time spent waiting for synchronization is monitored for a plurality of tasks for each node of the multi-node cluster. These values are utilized to generate a model which correlates the values of the performance counters to the amount of time spent waiting for synchronization. Once the model is built, the values of the performance counters are monitored for a period of time at the start of each task, and these values are input into the model. The model generates a prediction of whether a given node is on the critical path. If the given node is predicted to be on the critical path, the power allocation of the given node is increased.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2020

Stochastic Virtual Battery Modeling of Uncertain Electrical Loads using Variational Autoencoder

Effective utilization of flexible loads for grid services, while satisfying end-user preferences and constraints, requires an accurate estimation of the aggregated predictive flexibility offered by the electrical loads. Recently, there have been efforts to quantify the predictive flexibility of thermostatic loads (e.g. residential air-conditioners, electric water-heaters) using the notion of virtual battery (VB), whose state evolution is governed by a first order dynamics including self-dissipation rate, and power and energy capacities. Identifying the VB model parameters for a collection of thermostatic loads, however, is challenging primarily due to uncertainties and lack of information regarding the end-user behavior, underlying device models and parameters. In this paper, we propose a \textit{variational autoencoder}-based deep learning algorithm to identify the parameters of the VB model. Using available sensors and meters data, the proposed algorithm generates not only point estimates of the VB parameters, but also confidence intervals around those values. Effectiveness of the proposed frameworks is demonstrated on a collection of electric water-heater loads, whose operation is driven by uncertain water usage profiles.

virtual battery, deep learning algorithms↗
DOE OSTI2022

USE OF TWO-PISTON SPLAT QUENCHING TO INVESTIGATE & CHARACTERIZE THE IMPACT OF COMPOSITIONAL VARIATIONS ON RAPID SOLIDIFICATION MICROSTRUCTURES & SUB-MICROSCALE FEATURES IN STAINLESS STEEL ALLOY.

The objective of this dissertation was to use two-piston splat quenching (SQ) to investigate the impact of compositional modifications on the solidification and microstructure of rapidly solidified austenitic stainless steels (SS) and to demonstrate the ability of SQ to quickly and effectively simulate rapid solidification conditions similar to those found in powder bed fusion (PBF) additive techniques. PBF techniques like laser powder bed fusion (LPBF) are being implemented across a breadth of research and industrial applications to create parts with complex geometries and performance capabilities while pushing the current limits of processing conditions and understanding of material systems. In this work, SQ was used to experimentally produce rapid solidification in 20+ unique austenitic SS compositions with systematic variations of the chrome and nickel equivalency ratio (Cr/Nieq) through targeted compositional modifications. From the targeted change of Cr, Ni, and Mo concentrations in rapidly solidified SS alloys, the ferrite solidification mode was found to be the primary solidification mode at significantly lower Cr/Nieq than previously predicted for RS. Also, decreasing concentrations of Fe at a constant Cr/Nieq ratio (i.e., different Fe isopleths), or increased Mo concentrations at a constant Cr/Nieq ratio were found to suppress the ferrite to austenite massive transformation when compared to alloys with lower concentrations at the same Cr/Nieq. Using an established empirical relationship between cell size and cooling rate, the SQ technique was estimated to produce cooling rates between 106 and 108 K/s. Thermal gradients were extracted from 2-D heat transfer simulations of the SQ solidification event and used with these cooling rates to produce solidification rate estimates for SQ which were between 0.4-1.6m/s. The primary solidification mode was observed to be the determining factor in which elements segregated to the cell boundaries during RS, for which Cr and Mo were the main elements to segregate during primary austenite solidification and Ni during primary ferrite solidification. Finally, the solidification rates and conditions produced by SQ experiments resulted in similar microstructures, features, and microsegregation to what was found in LPBF samples of the same feedstock.

Hasenbusch, Zachary↗
DOE OSTI2021

Forecasting Dynamic Line Rating with Spatial Variation Considerations

Dynamic line rating (DLR) is a technology that allows the ampacity of an electrical conductor to be calculated using real-time or forecasted weather conditions. Historically, the ampacity of a conductor has been determined using a static line rating method which assumes conservative weather assumptions. Therefore, not only can DLR give a more accurate measurement of the true ampacity of a conductor, but it can also increase its ampacity during weather conditions with greater thermal mitigations. The two primary cooling factors in the ampacity calculations are wind speed and direction. In complex terrain, wind speed and direction can have large variations over short distances. Therefore, accurately identifying the limiting span of a transmission line requires high spatial resolution of the wind along its path. One solution is to install dense weather stations along their path, though this can become costly over long distances. Therefore, researchers have investigated the use of Computation Fluid Dynamic (CFD) simulations to accurately compute the wind field along the path of a transmission line and use these results to identify the limiting section of the conductor. This work presents a case study that evaluates the coupling of CFD simulations and forecasted weather simulations using the High-Resolution Rapid Refresh (HRRR) model points over a 2-year span within a region in south eastern Idaho. The primary goal of the work is the evaluation of the number of HRRR model points used, i.e., weather stations, along the path of the line and the accuracy of the resulting DLR ampacity. This was done using 4, 10, 17, 26, and 35 HRRR model points along two transmission line paths. The results indicate that as the number of model points are increased, the DLR ampacity of the lines decrease, yet converge as more points are added and demonstrate little change with additional HRRR points. It is expected that these results can help transmission line operators identify the number of weather stations that must be installed when coupled with CFD simulations and DLR ampacity to ensure accurate ratings and safe operations.

17 WIND ENERGY↗
DOE OSTI2021

Forecasting Dynamic Line Rating with Spatial Variation Considerations

Dynamic line rating (DLR) is a technology that allows the ampacity of an electrical conductor to be calculated using real-time or forecasted weather conditions. Historically, the ampacity of a conductor has been determined using a static line rating method which assumes conservative weather assumptions. Therefore, not only can DLR give a more accurate measurement of the true ampacity of a conductor, but it can also increase its ampacity during weather conditions with greater thermal mitigations. The two primary cooling factors in the ampacity calculations are wind speed and direction. In complex terrain, wind speed and direction can have large variations over short distances. Therefore, accurately identifying the limiting span of a transmission line requires high spatial resolution of the wind along its path. One solution is to install dense weather stations along their path, though this can become costly over long distances. Therefore, researchers have investigated the use of Computation Fluid Dynamic (CFD) simulations to accurately compute the wind field along the path of a transmission line and use these results to identify the limiting section of the conductor. This work presents a case study that evaluates the coupling of CFD simulations and forecasted weather simulations using the High-Resolution Rapid Refresh (HRRR) model points over a 2-year span within a region in south eastern Idaho. The primary goal of the work is the evaluation of the number of HRRR model points used, i.e., weather stations, along the path of the line and the accuracy of the resulting ampacity. This was done using 4, 10, 17, 26, and 35 HRRR model points along two transmission line paths. The results indicate that as the number of model points are increased, the DLR ampacity of the lines decrease, yet converge as more points are added and demonstrate little change with additional HRRR points. It is expected that these results can help transmission line operators identify the number of weather stations that must be installed when coupled with CFD simulations and DLR ampacity to ensure accurate ratings and safe operations.

17 WIND ENERGY↗
DOE OSTI2023

Fast Particle-based Anomaly Detection Algorithm with Variational Autoencoder

Model-agnostic anomaly detection is one of the promising approaches in the search for new beyond the standard model physics. In this paper, we present Set-VAE, a particle-based variational autoencoder (VAE) anomaly detection algorithm. We demonstrate a 2x signal efficiency gain compared with traditional subjettiness-based jet selection. Furthermore, with an eye to the future deployment to trigger systems, we propose the CLIP-VAE, which reduces the inference-time cost of anomaly detection by using the KL-divergence loss as the anomaly score, resulting in a 2x acceleration in latency and reducing the caching requirement.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2026

Reweighting Underlying Event and Colour Reconnection parameter variations in Sherpa

We propose and validate a new method to trace the impact of parameter variations in the simulation of multi-parton interactions and colour reconnections in the Sherpa event generator. They are reflected, at an event-by-event basis, through relative weights with respect to the central production parameters that give rise to the generated events and distributions. Our method facilitates the tuning of the Monte Carlo event generator at a dramatically reduced computational cost, alleviates parameter sensitivity studies, and enables robust quantification of parametric uncertainties on-the-fly, one of the missing ingredients for future simulations of high-energy particle collisions. The method can easily be adapted to and implemented in other event generators. To illustrate its potential, we here consider combined tunes of the multi-parton-interaction and colour-reconnection models in Sherpa using LHC proton-proton collision data at $\sqrt{s}=7\,\text{TeV}$. We furthermore calibrate the energy-scaling behaviour of dimensionful model parameters based on $\sqrt{s}=13\,\text{TeV}$ LHC data and Tevatron data taken at $\sqrt{s}=1.96\,\text{TeV}$.

Pabst, Moritz [Gottingen U.]↗
DOE OSTI2022

Variational and phase response analysis for limit cycles with hard boundaries, with applications to neuromechanical control problems

Motor systems show an overall robustness, but because they are highly nonlinear, understanding how they achieve robustness is difficult. In many rhythmic systems, robustness against perturbations involves response of both the shape and the timing of the trajectory. This makes the study of robustness even more challenging. To understand how a motor system produces robust behaviors in a variable environment, we consider a neuromechanical model of motor patterns in the feeding apparatus of the marine mollusk Aplysia californica (Shaw et al. in J Comput Neurosci 38(1):25–51, 2015; Lyttle et al. in Biol Cybern 111(1):25–47, 2017). We established in (Wang et al. in SIAM J Appl Dyn Syst 20(2):701–744, 2021. https://doi.org/10.1137/20M1344974) the tools for studying combined shape and timing responses of limit cycle systems under sustained perturbations and here apply them to study robustness of the neuromechanical model against increased mechanical load during swallowing. Interestingly, we discover that nonlinear biomechanical properties confer resilience by immediately increasing resistance to applied loads. In contrast, the effect of changed sensory feedback signal is significantly delayed by the firing rates’ hard boundary properties. Our analysis suggests that sensory feedback contributes to robustness in swallowing primarily by shifting the timing of neural activation involved in the power stroke of the motor cycle (retraction). This effect enables the system to generate stronger retractor muscle forces to compensate for the increased load, and hence achieve strong robustness. The approaches that we are applying to understanding a neuromechanical model in Aplysia, and the results that we have obtained, are likely to provide insights into the function of other motor systems that encounter changing mechanical loads and hard boundaries, both due to mechanical and neuronal firing properties.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

Chemical degradation of fly ash blended concrete with the seasonal variation of rainwater in a radioactive waste repository: A thermodynamic modeling approach

Highlights: • The thermodynamic model for the cementitious system was successfully developed. • The chemical degradation of concrete was greatly affected by rainwater types. • Inorganic carbon species in rainwater reduced the chemical resistance of concrete. • The durability of concrete to rainwater decreased with increasing fly ash content. This study presents a long-term degradation behavior of fly ash blended concrete in a vault type low- and intermediate-level radioactive waste (LILW) repository by thermodynamic equilibrium calculations using PHREEQC combined with CEMDATA18 database. Since rainwater plays a predominant role as leachate for the concrete waste container in the repository, the effect of chemical properties of seasonal rainwater on the chemical degradation of concrete was analyzed. In addition, the impact of the blending with fly ash on the chemical degradation was evaluated through a gradual replacement of ordinary Portland cement (OPC) by fly ash. Regardless of the replacement level, autumn rainwater showed the greatest influence on the concrete degradation owing to the presence of inorganic carbon species, which induce the carbonation. The resistance of concrete to chemical degradation by rainwater was persistently reduced due to the decreasing formation of portlandite and calcium silicate hydrate (C-S-H) with increasing replacement level.

36 MATERIALS SCIENCE↗
DOE OSTI2021

Mexico and U.S. Power Systems Under Variations in Natural Gas Prices

This study examines the impact of natural gas prices on the power systems of Mexico and the United States. For this, we develop an integrated modeling framework by soft linking three different techno-economic bottom-up models of the power and energy systems, one partial equilibrium model of the natural gas sector, and a partial equilibrium model of the Mexican energy sector. Our results show several interesting results: high natural gas prices raise the use of carbon-intensive technologies in the short-term and boost renewable investments at longer time intervals, increasing emissions in earlier periods and reducing them thereafter. Regarding system costs, because of more capital-intensive green power and lower expenditures in raw energy carriers, capital costs rise and operating costs decrease in the long haul. Furthermore, we see an increase in natural gas demand when its price is low, reducing long-term capital and operating costs through cheaper energy inputs in natural gas facilities and a lower share of capital-intensive renewable facilities in the power system. Concerning emissions, low natural-gas prices decrease coal use in the United States, reducing anthropogenic emissions until the last stages of the optimization period. For Mexico, they show heterogeneous results across models. Policymakers can use this study's results to understand the influence of natural gas prices in the Mexican and United States energy sectors.

45 MILITARY TECHNOLOGY, WEAPONRY, AND NATIONAL DEF↗
DOE OSTI2022

Explicitly antisymmetrized neural network layers for variational Monte Carlo simulation

The combination of neural networks and quantum Monte Carlo methods has arisen as a promising path forward for highly accurate electronic structure calculations. Previous proposals have combined equivariant neural network layers with a final antisymmetric layer in order to satisfy the antisymmetry requirements of the electronic wavefunction. However, to date it is unclear if one can represent antisymmetric functions of physical interest, and it is difficult to precisely measure the expressiveness of the antisymmetric layer. Here, this work attempts to address this problem by introducing explicitly antisymmetrized universal neural network layers. This approach has a computational cost which increases factorially with respect to the system size, but we are nonetheless able to apply it to small systems to better understand how the structure of the antisymmetric layer affects its performance. We first introduce a generic antisymmetric (GA) neural network layer, which we use to replace the entire antisymmetric layer of the highly accurate ansatz known as the FermiNet. We demonstrate that the resulting FermiNet-GA architecture can yield effectively the exact ground state energy for small atoms and molecules. We then consider a factorized antisymmetric (FA) layer which more directly generalizes the FermiNet by replacing the products of determinants with products of antisymmetrized neural networks. We find, interestingly, that the resulting FermiNet-FA architecture does not significantly outperform the FermiNet. This strongly suggests that the sum of products of antisymmetries is a key limiting aspect of the FermiNet architecture. To explore this further, we investigate a slight modification of the FermiNet, called the full determinant mode, which replaces each product of determinants with a single combined determinant. We find that the full single-determinant FermiNet closes a large part of the gap between the standard single-determinant FermiNet and FermiNet-GA on small atomic and molecular problems. Surprisingly, on the nitrogen molecule at a dissociating bond length of 4.0 Bohr, the full single-determinant FermiNet can outperform the largest standard FermiNet calculation with 64 determinants.

97 MATHEMATICS AND COMPUTING↗