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At least 649 records · Page 36

Effects of catalyst droplets on wire growth and the resulting branched structures during VLS growth

Vapor-liquid-solid (VLS) method is vastly employed to grow hierarchical structures with unique properties. However, key questions remain, such as what controls the branched structures and what the roles of catalyst droplet size are during the growth. Here, an in-depth understanding of the kinetics of the nucleation, growth, and subsequent coalescence processes of Bi liquid catalyst droplets is provided by direct observation of PbSe branched wire growth in an environmental transmission electron microscope. This brings a kinetic control of the branch density by varying the parameters, such as temperature. In addition, the dependence of wire growth rate on the catalyst droplet size is revealed, i.e., the smaller the catalyst size the larger the wire growth rate, unlike the wire growth controlled by Gibbs-Thomson effect, possibly due to different mass transport pathways and atomic surface diffusion. These results extend the fundamental understanding of the VLS growth mechanism of branched structures and benefit the structure design of hierarchical materials with tailored properties.

36 MATERIALS SCIENCE↗

A combinatorial droplet microfluidic device integrated with mass spectrometry for enzyme screening

Mass spectrometry (MS) enables detection of different chemical species with a very high specificity; however, it can be limited by its throughput. Integrating MS with microfluidics has a tremendous potential to improve throughput and accelerate biochemical research. In this work, we introduce Drop-NIMS, a combination of a passive droplet loading microfluidic device and a matrix-free MS laser desorption ionization technique called nanostructure-initiator mass spectrometry (NIMS). This platform combines different droplets at random to generate a combinatorial library of enzymatic reactions that are deposited directly on the NIMS surface without requiring additional sample handling. The enzyme reaction products are then detected with MS. Drop-NIMS was used to rapidly screen enzymatic reactions containing low (on the order of nL) volumes of glycoside reactants and glycoside hydrolase enzymes per reaction. MS “barcodes” (small compounds with unique masses) were added to the droplets to identify different combinations of substrates and enzymes created by the device. We assigned xylanase activities to several putative glycoside hydrolases, making them relevant to food and biofuel industrial applications. Overall, Drop-NIMS is simple to fabricate, assemble, and operate and it has potential to be used with many other small molecule metabolites.

47 OTHER INSTRUMENTATION↗

Mean force on a finite-sized rigid particle, droplet, or bubble in a viscous compressible medium

In this paper, a force formulation to compute the axial acoustic mean second-order force on finite-sized compressible and rigid particles is presented. The flow inside and outside the spherical inclusion is considered viscous and compressible. Other than for volumetric pulsations of the bubble/droplet, the sphericity of the inclusion is maintained (taken to be unity). A far-field derivation approach has been used to compute the force due to standing and traveling waves; and the force is expressed as a multipole expansion (infinite series). In case of a bubble and a rigid particle, there exist three length scales that govern the mean second-order force: mean radius of the spherical inclusion (R 0 ), wavelength of the incoming acoustics (λ), and the momentum diffusion thickness of the ambient fluid (δ o ). While R 0 and λ are arbitrary, we assume the viscous length scale is negligibly small compared to the acoustic wavelength. In case of a droplet, however, the following additional parameters (inside to outside fluid ratios) also play a role: density ratio ($\sim\atop{p}$), viscosity ratio ($\sim\atop{μ}$, and speed of sound ratio ($\sim\atop{c}$). The force expression yields the correct behavior in several limiting cases considered: (i) inviscid bubble and droplets with R 0 /λ « 1, (ii) inviscid bubbles with finite R 0 /λ, and (iii) finite size rigid immovable particles. In general, while the monopole alone is sufficient to capture the force for small bubbles, higher-order terms are found to be important when R 0 /λ ≥ 0.02. In addition to reporting similar behavior for droplets, we study the effect arising from $\sim\atop{p}$, $\sim\atop{μ}$, $\sim\atop{c}$, and δ o /R 0 on the mean second-order force.

42 ENGINEERING↗

A purely kinetic description of the evaporation of water droplets

The process of water evaporation, although deeply studied, does not enjoy a kinetic description that captures known physics and can be integrated with other detailed processes such as drying of catalytic membranes embedded in vapor-fed devices and chemical reactions in aerosol whose volumes are changing dynamically. In this work, we present a simple, three-step kinetic model for water evaporation that is based on theory and validated by using well-established thermodynamic models of droplet size as a function of time, temperature, and relative humidity as well as data from time-resolved measurements of evaporating droplet size. Additionally, the kinetic mechanism for evaporation is a combination of two limiting processes occurring in the highly dynamic liquid-vapor interfacial region: direct first order desorption of a single water molecule and desorption resulting from a local fluctuation, described using third order kinetics. The model reproduces data over a range of relative humidities and temperatures only if the interface that separates bulk water from gas phase water has a finite width, consistent with previous experimental and theoretical studies. The influence of droplet cooling during rapid evaporation on the kinetics is discussed; discrepancies between the various models point to the need for additional experimental data to identify their origin.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Robotic automation of droplet microfluidics

Droplet microfluidics enables powerful analytic capabilities but often requires workflows involving macro- and microfluidic processing steps that are cumbersome to perform manually. Here, we demonstrate the automation of droplet microfluidics with commercial fluid-handling robotics. The workflows incorporate common microfluidic devices including droplet generators, mergers, and sorters and utilize the robot's native capabilities for thermal control, incubation, and plate scanning. The ability to automate microfluidic devices using commercial fluid handling will speed up the integration of these methods into biological workflows.

59 BASIC BIOLOGICAL SCIENCES↗

Enzymatic degradation of liquid droplets of DNA is modulated near the phase boundary

Significance Biomolecules, such as proteins or nucleic acids, can condense into liquid droplets whose biological or technological function depends on interactions with other solutes. We explore such interactions using a system of self-assembled DNA particles that forms liquid droplets which are degraded by an active solute, a restriction enzyme. We find that enzymes are able to penetrate the droplets when the liquid is poised near the phase boundary, enhancing the degradation rate and, in certain cases, causing internal bubbling. These results point to a complex interplay of phase stability and solute transport in liquid–liquid phase-separating macromolecular systems.

59 BASIC BIOLOGICAL SCIENCES↗

Extended families of critical and stationary droplets for nonequilibrium phase transitions in spatially discrete bistable systems

Bistable nonequilibrium systems are realized in catalytic reaction-diffusion processes, biological transport and regulation, spatial epidemics, etc. Behavior in spatially continuous formulations, described at the mean-field level by reaction-diffusion type equations (RDEs), often mimics that of classic equilibrium van der Waals type systems. When accounting for noise, similarities include a discontinuous phase transition at some value, p eq , of a control parameter, p , with metastability and hysteresis around p eq . For each p , there is a unique critical droplet of the more stable phase embedded in the less stable or metastable phase which is stationary (neither shrinking nor growing), and with size diverging as p → p eq . Spatially discrete analogs of these mean-field formulations, described by lattice differential equations (LDEs), are more appropriate for some applications, but have received less attention. It is recognized that LDEs can exhibit richer behavior than RDEs, specifically propagation failure for planar interphases separating distinct phases. Herein, we show that this feature, together with an orientation dependence of planar interface propagation also deriving from spatial discreteness, results in the occurrence of entire families of stationary droplets. The extent of these families increases approaching the transition and can be infinite if propagation failure is realized. In addition, there can exist a regime of generic two-phase coexistence where arbitrarily large droplets of either phase always shrink. Such rich behavior is qualitatively distinct from that for classic nucleation in equilibrium and spatially continuous nonequilibrium systems.

97 MATHEMATICS AND COMPUTING↗

Arabidopsis SEIPIN Proteins Modulate Triacylglycerol Accumulation and Influence Lipid Droplet Proliferation

The lipodystrophy protein SEIPIN is important for lipid droplet (LD) biogenesis in human and yeast cells. In contrast with the single SEIPIN genes in humans and yeast, there are three SEIPIN homologs in Arabidopsis thaliana, designated SEIPIN1, SEIPIN2, and SEIPIN3. Essentially nothing is known about the functions of SEIPIN homologs in plants. Here, a yeast (Saccharomyces cerevisiae) SEIPIN deletion mutant strain and a plant (Nicotiana benthamiana) transient expression system were used to test the ability of Arabidopsis SEIPINs to influence LD morphology. In both species, expression of SEIPIN1 promoted accumulation of large-sized lipid droplets, while expression of SEIPIN2 and especially SEIPIN3 promoted small LDs. Arabidopsis SEIPINs increased triacylglycerol levels and altered composition. In tobacco, endoplasmic reticulum (ER)-localized SEIPINs reorganized the normal, reticulated ER structure into discrete ER domains that colocalized with LDs. N-terminal deletions and swapping experiments of SEIPIN1 and 3 revealed that this region of SEIPIN determines LD size. Ectopic overexpression of SEIPIN1 in Arabidopsis resulted in increased numbers of large LDs in leaves, as well as in seeds, and increased seed oil content by up to 10% over wild-type seeds. By contrast, RNAi suppression of SEIPIN1 resulted in smaller seeds and, as a consequence, a reduction in the amount of oil per seed compared with the wild type. Finally, overall, our results indicate that Arabidopsis SEIPINs are part of a conserved LD biogenesis machinery in eukaryotes and that in plants these proteins may have evolved specialized roles in the storage of neutral lipids by differentially modulating the number and sizes of lipid droplets.

59 BASIC BIOLOGICAL SCIENCES↗

Experimental evaluation of respiratory droplet spread to rooms connected by a central ventilation system

This article presents results from an experimental study to ascertain the transmissibility of the SARS-CoV-2 virus between rooms in a building that are connected by a central ventilation system. Respiratory droplet surrogates made of mucus and virus mimics were released in one room in a test building and measurements of concentration levels were made in other rooms connected via the ventilation system. The paper presents experimental results for different ventilation system configurations, including ventilation rate, filtration level (up to MERV-13), and fractional outdoor air intake. The most important finding is that respiratory droplets can and do transit through central ventilation systems, suggesting a mechanism for viral transmission (and COVID-19 specifically) within the built environment in reasonable agreement with well-mixed models. We also find the deposition of these droplets on room walls to be negligibly small. Furthermore, the energy use impact of the different configuration settings is also quantified to help inform intelligent building operation that can simultaneously address energy use and occupant health.

60 APPLIED LIFE SCIENCES↗

Quasi-Steady Simulation of Glaze Ice Accretion and Heat Transfer in the Supercooled Large Droplet Regime in Atmospheric Turbulent Air Flow

Abstract To avoid the use of a computationally intensive full unsteady simulation while providing an accurate solution, a quasi-steady simulation has been performed to study glaze and mixed ice accretion in the supercooled large droplet (SLD) regime in turbulent flow of atmospheric air. We have attempted to find the minimum time-step necessary to adequately simulate the icing process on an airfoil surface. Based on node displacement, a mesh morphing scheme has been adopted in the computations to account for the moving boundaries that are caused by the continuous ice buildup. We have modeled ice accretion on an airfoil surface for a time period of 232 s using several time steps. At each time-step we solved the steady-state conservation equations for the air and droplet phases and then used the results as initial conditions for the next time position. The magnitude of the time-step ranged from a least accurate two-shot simulation (where the time-step is 116 s) to a most accurate 2320-shot simulation (where the time-step is 0.1 s). In-between these two extreme time steps, we have performed a three-shot simulation (where the time-step is 77.33 s), a four-shot simulation (where the time-step is 58 s), a six-shot simulation (where the time-step is 38.67 s), a 46-shot simulation (where the time-step is 5 s), and a 232-shot simulation (where the time-step is 1 s). We have done so to find out the degree of accuracy (or inaccuracy) of the multishot simulation approach and to find out the appropriate time-step needed for a successful and valid quasi-steady simulation. A valid quasi-steady simulation needs to use a time-step that is small enough to reproduce the full time-dependent solution within a very small error band. We have found that both the 1 s and the 0.1 s time steps produce virtually identical results. This is the primary litmus test that proves the validity of the quasi-steady-state assumption. The results adopted in this paper are thus all based on the more conservative 0.1 s time-step. In the process of performing the simulations, remeshing was required in order to maintain the grid density in zones of high curvature to be able to capture the full physics in those zones. After successfully modeling glaze ice accretion over the airfoil surface using the 0.1 s quasi-steady simulation approach, the effects of supercooled large droplets (SLDs) impacting the surface have been examined and presented in terms of the variation of the local collection efficiency, the water film thickness, and the heat transfer rate. Examination of the variation of the angle that the ice horn makes with the airfoil chord line demonstrated a 20% improvement in angle prediction when the time-step is reduced from 116 s to 0.1 s. The analysis also reveals a 12% or 8.5% increase in the maximum collection efficiency, βmax, depending on whether the value of the liquid water content (LWC) has been doubled from 0.5 g/m3 to 1 g/m3, or the value of the freestream velocity has been doubled from 75 m/s to 150 m/s, respectively. Because of the need to monitor the local collection efficiency and convective heat fluxes at each shot (regardless of the number of shots employed), the approach adopted here was found to be effective in successively and successfully reproducing the curvature of the glaze ice horn.

Engineering↗

Neuromorphic ionic computing in droplet interface synapses

Ionic devices with memory capabilities can emulate neural functionality, enabling neuromorphic computing and biomedical applications. In this study, we report an ionic spiking synapse based on aqueous droplet interface bilayer assembly. Under stepwise triangular voltages, the device displays coupled memcapacitive-memristive behavior, showing noncrossing pinched hysteretic I-V loops. This hysteretic ion dynamics can be regulated by modifying bilayer components, reconstituting protein channels, or adjusting droplet assembly configuration. Droplet interface synapses (DIS) exhibit fundamental neuromorphic behaviors such as paired-pulse facilitation/depression, spike rate–dependent plasticity, Hebbian learning, and short-term associative learning under classical conditioning. We also used reservoir computing with DIS to implement two learning algorithms: a classification algorithm that recognizes handwritten digits and a reinforcement learning algorithm that learns to play a board game of tic-tac-toe.

Li, Zhongwu [Lawrence Livermore National Laborator↗

Locally narrow droplet size distributions are ubiquitous in stratocumulus clouds

Marine stratocumulus clouds are the “global reflectors,” sharply contrasting with the underlying dark ocean surface and exerting a net cooling on Earth’s climate. The magnitude of this cooling remains uncertain in part owing to the averaged representation of microphysical processes, such as the droplet-to-drizzle transition in global climate models (GCMs). Current GCMs parameterize cloud droplet size distributions as broad, cloud-averaged gammas. Here, using digital holographic measurements of discrete stratocumulus cloud volumes, we found cloud droplet size distributions to be narrower at the centimeter scale, never resembling the cloud average. These local distributions tended to form pockets of similar-looking cloud regions, each characterized by a size distribution shape that is diluted to varying degrees. These observations open the way for new modeling representations of microphysical processes.

54 ENVIRONMENTAL SCIENCES↗

A Technique for Estimating Liquid Droplet Diameter and Liquid Water Content in Stratocumulus Clouds Using Radar and Lidar Measurements

This paper describes a technique for estimating the liquid water content (LWC) and a characteristic particle diameter in stratocumulus clouds using radar and lidar observations. The uncertainty in LWC estimate from radar and lidar measurements is significantly reduced once the characteristic particle diameter is known. The technique is independent of the drop size distribution. It is applicable for a broad range of W-band reflectivity Z between -30 and 0 dBZ and all values of lidar backscatter β observations. No partitioning of cloud or drizzle is required on the basis of an arbitrary threshold of Z as in prior studies. A method for estimating droplet diameter and LWC was derived from the electromagnetic simulations of radar and lidar observations. In situ stratocumulus cloud and drizzle probe spectra were input to the electromagnetic simulation. The retrieved droplet diameter and LWC were validated using in situ measurements from the southeastern Pacific Ocean. The retrieval method was applied to radar and lidar measurements from the northeastern Pacific. Uncertainty in the retrieved droplet diameter and LWC that are due to the measurement errors in radar and lidar backscatter measurements are 7% and 14%, respectively. The retrieved LWC was validated using the concurrent G-band radiometer estimates of the liquid water path.

54 ENVIRONMENTAL SCIENCES↗

Digital droplet multiple displacement amplification (ddMDA) for whole genome sequencing of limited DNA samples

Here, multiple displacement amplification (MDA) is a widely used technique for amplification of DNA from samples containing limited amounts of DNA (e.g., uncultivable microbes or clinical samples) before whole genome sequencing. Despite its advantages of high yield and fidelity, it suffers from high amplification bias and non-specific amplification when amplifying sub-nanogram of template DNA. Here, we present a microfluidic digital droplet MDA (ddMDA) technique where partitioning of the template DNA into thousands of sub-nanoliter droplets, each containing a small number of DNA fragments, greatly reduces the competition among DNA fragments for primers and polymerase thereby greatly reducing amplification bias. Consequently, the ddMDA approach enabled a more uniform coverage of amplification over the entire length of the genome, with significantly lower bias and non-specific amplification than conventional MDA. For a sample containing 0.1 pg/μL of E. coli DNA (equivalent of ~3/1000 of an E. coli genome per droplet), ddMDA achieves a 65-fold increase in coverage in de novo assembly, and more than 20-fold increase in specificity (percentage of reads mapping to E. coli) compared to the conventional tube MDA. ddMDA offers a powerful method useful for many applications including medical diagnostics, forensics, and environmental microbiology.

59 BASIC BIOLOGICAL SCIENCES↗

Surface Tension Estimates for Droplet Formation in Slurries with Low Concentrations of Hydrophobic Particles, Polymer Flocculants or Surface-Active Contaminants

In support of the K-Basin project, Pacific Northwest National Laboratory (PNNL) was requested to evaluate the appropriate surface tension value to use in models predicting the formation of droplets from spray leaks of K-Basin slurries. The specific issue was whether it was more appropriate to use the surface tension of pure water in model predictions for all plausible spray leaks or to use a lower value. The surface tension of K-Basin slurries is potentially affected not only by particles but by low concentrations of nonionic polyacrylamide flocculant and perhaps by contaminants with surfactant properties, which could decrease the surface tension below that of water. A lower surface tension value typically results in smaller droplets being formed with a larger fraction of droplets in the respirable size range, so using the higher surface tension value of pure water is not conservative and thus needs a strong technical basis.

36 MATERIALS SCIENCE↗

Computational Fluid Dynamics of rising droplets

The main goal of this study is to perform simulations of droplet dynamics using Truchas, a LANL-developed computational fluid dynamics (CFD) software, and compare them to a computational study of Hysing et al.[IJNMF, 2009, 60:1259]. Understanding droplet dynamics is of fundamental importance in liquid-liquid extraction, a process used in the nuclear fuel cycle to separate various components. Simulations of a single droplet rising by buoyancy are conducted in two-dimensions. Multiple parametric studies are carried out to ensure the problem set-up is optimized.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Validation of CTF Droplet Entrainment and Annular/Mist Closure Models using Riso Steam/Water Experiments

This report summarizes the work done to validate the droplet entrainment and de-entrainment models as well as two-phase closure models in the CTF code by comparison with experimental data obtained at Riso National Laboratory. The Riso data included a series of over 250 steam/water experiments that were performed in both tube and annulus geometries over a range of various pressures and outlet qualities. Experimental conditions were set so that the majority of cases were in the annular/mist ow regime. Measurements included liquid lm ow rate, droplet ow rate, lm thickness, and two-phase pressure drop. CTF was used to model 180 of the tubular geometry cases, matching experimental geometry, outlet pressure, and outlet ow quality to experimental values. CTF results were compared to the experimental data at the outlet of the test section in terms of vapor and entrained liquid ow fractions, pressure drop per unit length, and liquid lm thickness. The entire process of generating CTF input decks, running cases, extracting data, and generating comparison plots was scripted using Python and Matplotlib for a completely automated validation process. All test cases and scripting tools have been committed to the COBRA-TF master repository and selected cases have been added to the continuous testing system to serve as regression tests. The dierences between the CTF- and experimentally-calculated ow fraction values were con- sistent with previous calculations by Wurtz, who applied the same entrainment correlation to the same data. It has been found that CTF's entrainment/de-entrainment predictive capability in the annular/mist ow regime for this particular facility is comparable to the licensed industry code, COBRAG. While lm and droplet predictions are generally good, it has been found that accuracy is diminished at lower ow qualities. This nding is consistent with the noted deciencies in the Wurtz entrainment model employed by CTF. The CTF predicted two-phase pressure drop in the annular/mist ow regime has been found to be highly inaccurate, exhibiting a clear bias with respect to the experimental data. This inaccuracy led to an investigation that revealed deciencies in the implementation of the annular/mist interfacial friction model, which should be investigated further in the future. Looking to published COBRAG results for this same facility reveal it exhibits no bias with regard to experimental pressure drop results. In addition to the problems with pressure drop prediction, the lm thickness was also signicantly under-predicted by CTF compared to both experimental data and Wurtz's analytical calculations. Film thickness is calculated using a simple geometric relationship and lm void fraction in CTF, which is dependent on slip ratio and interfacial friction. It is possible that the issues aecting the pressure drop and lm void prediction are related.

97 MATHEMATICS AND COMPUTING↗

Immersion freezing of water and aqueous ammonium sulfate droplets initiated by humic-like substances as a function of water activity

Immersion freezing of water and aqueous (NH 4 ) 2 SO 4 droplets containing leonardite (LEO) and Pahokee peat (PP) serving as surrogates for humic-like substances (HULIS) has been investigated. Organic aerosol containing HULIS are ubiquitous in the atmosphere; however, their potential for ice cloud formation is uncertain. Immersion freezing has been studied for temperatures as low as 215K and solution water activity, a w , from 0.85 to 1.0. The freezing temperatures of water and aqueous solution droplets containing LEO and PP are 5–15 K warmer than homogeneous ice nucleation temperatures. Heterogeneous freezing temperatures can be represented by a horizontal shift of the ice melting curve as a function of solution aw by Δ a w = 0.2703 and 0.2466, respectively. Corresponding heterogeneous ice nucleation rate coefficients, Jhet, are (9.6 ± 2.5) × 10 4 and (5.4 ± 1.4) × 10 4 cm -2 s -1 for LEO and PP containing droplets, respectively, and remain constant along freezing curves characterized by Δ a w . Consequently predictions of freezing temperatures and kinetics can be made without knowledge of the solute type when relative humidity and ice nuclei (IN) surface areas are known. The acquired ice nucleation data are applied to evaluate different approaches to fit and reproduce experimentally derived frozen fractions. In addition, we apply a basic formulation of classical nucleation theory (α( T )-model) to calculate contact angles and frozen fractions. Contact angles calculated for each ice nucleus as a function of temperature, α( T )-model, reproduce exactly experimentally derived frozen fractions without involving free-fit parameters. However, assigning the IN a single contact angle for the entire population (single-α model) is not suited to represent the frozen fractions. Application of α-PDF, active sites, and deterministic model approaches to measured frozen fractions yield similar good representations. Furthermore, when using a single parameterization of α-PDF or active sites distribution to fit all individual a w immersion freezing data simultaneously, frozen fraction curves are not reproduced. This implies that these fitting formulations cannot be applied to immersion freezing of aqueous solutions, and suggests that derived fit parameters do not represent independent particle properties. Thus, from fitting frozen fractions only, the underlying ice nucleation mechanism and nature of the ice nucleating sites cannot be inferred. In contrast to using fitted functions obtained to represent experimental conditions only, we suggest to use experimentally derived J het as a function of temperature and a w that can be applied to conditions outside of those probed in laboratory. Finally, this is because J het (T) is independent of time and IN surface areas in contrast to the fit parameters obtained by representation of experimentally derived frozen fractions.

54 ENVIRONMENTAL SCIENCES↗