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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 631 records · Page 35
All sourcesNASA NTRSDOE OSTI
DOE OSTI2024

PPI DataHub Project Data Package: S. elongatus PCC 7942 Circadian Control Bioproduction Transcriptomics (PB-DP3)

The purpose of this experiment was to evaluate how circadian clock regulation impacts carbon partitioning between storage, growth, and product synthesis in Synechococcus elongatus PCC 7942 in providing insights to strategies for enhanced bioproduction. Sample data was acquired using a Illumina HiSeq sequencer system and processed for RNA sequencing (RNA-Seq) expression analysis. Transcriptomic differential expression analysis revealed coordinated circadian clock-driven adjustment of the cell cycle and rewiring of energy and carbon metabolism. Processed RNA-Seq datasets are openly accessible from the PNNL DataHub project dataset download page and contain secondary processed RNA-seq results files and supporting metadata materials linked to relevant source code information supporting data transparency and reuse.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2024

Human Host Cellular Response to HCoV-229E Infection Proteomics (ACS-JM-DP2)

The purpose of this experiment was to evaluate the human host cellular response to wild-type Human coronavirus strain 229E (HCoV-229E) infection. Sample data was obtained for mock and infected immortalized human lung epithelial cells (A549) (MOI 5) nuclear extracts, immortalized human lung fibroblasts cells (MRC5) (MOI5) nuclear extracts, and primary human airway epithelial (HAE) (MOI 3) cells from lung tissue and processed for proteome analysis. Processed datasets are openly accessible from the download button and contain secondary processed proteomic results files and supporting metadata materials. Experimental proteomics samples were prepared using Limited Proteolysis (LiP) methods for Label-free quantification (LFQ) and global proteomic evaluation. Sample data was acquired using a Q-Exactive HF-X mass spectrometer and was processed and compiled using MaxQuant software (v.1.6.17.0). Processed proteomic data downloads include a sample naming key, processed MaxQuant results/parameters, and protein annotated relative abundance files. See corresponding primary data accessions below and Viral Experiment LiP Analysis source code supporting data transparency and reuse. Experimental transcriptomics samples were collected in parallel and processed for RNA sequencing (RNA-Seq) as summarized under ACS-DP1 (https://data.pnnl.gov/group/nodes/dataset/34069).

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2025

Monthly Quality-filtered Aggregation of NOAA Climate Data Record (CDR) of AVHRR Leaf Area Index (LAI) and Fraction of Absorbed Photosynthetically Active Radiation (FAPAR), Version 5

This dataset contains gridded monthly Leaf Area Index (LAI) derived from the daily NOAA Climate Data Record (CDR) of AVHRR Leaf Area Index (LAI) and Fraction of Absorbed Photosynthetically Active Radiation (FAPAR), Version 5. This data record spans from 1981 to 2018 using data from eight NOAA polar orbiting satellites: NOAA-7, -9, -11, -14, -16, -17, -18 and -19. The data are projected on a 0.05 degree x 0.05 degree global grid, as in the original CDR. The original CDR is one of the Land Surface CDR Version 5 products produced by the NASA Goddard Space Flight Center (GSFC) and the University of Maryland (UMD), which is accompanied by algorithm documentation, data flow diagram and source code for the NOAA CDR Program. This dataset is in the netCDF-4 file format following ACDD and CF Conventions. This dataset has applied quality assurance information to only include "OK" data from the original CDR in the monthly aggregation.

Vermote, Eric [NASA Goddard Space Flight Center (G↗
DOE OSTI2026

Monthly Quality-filtered Aggregation of NOAA Climate Data Record (CDR) of AVHRR (Version 5) and VIIRS (Version 1) Leaf Area Index (LAI) and Fraction of Absorbed Photosynthetically Active Radiation (FAPAR)

This dataset contains gridded monthly Leaf Area Index (LAI) derived from the daily NOAA Climate Data Record (CDR) of AVHRR (Version 5) and VIIRS (Version 1) Leaf Area Index (LAI) and Fraction of Absorbed Photosynthetically Active Radiation (FAPAR). This data record spans from 1981 to 2024 using data from NOAA polar orbiting satellites: NOAA-7, -9, -11, -14, -16, -17, -18, -19 and S-NPP. The data are projected on a 0.05 degree x 0.05 degree global grid, as in the original CDR. The original CDR is one of the Land Surface CDR products produced by the NASA Goddard Space Flight Center (GSFC) and the University of Maryland (UMD), which is accompanied by algorithm documentation, data flow diagram and source code for the NOAA CDR Program. This dataset is in the netCDF-4 file format following ACDD and CF Conventions. This dataset has applied quality assurance information to only include "OK" data from the original CDR in the monthly aggregation.

Vermote, Eric [NASA Goddard Space Flight Center (G↗
DOE OSTI2023

ResStock: Annual Baseline Results with Component Loads

The ResStock Analysis Tool was developed by NREL with support from the U.S. Department of Energy to provide a new approach to large-scale residential analysis by combining large public and private data sources, statistical sampling, detailed sub hourly building simulations, and high-performance computing. This combination achieves unprecedented granularity and accuracy in modeling the diversity of the housing stock and the distributional impacts of building technologies in different communities. The annual baseline energy results from a national-scale ResStock run use typical meteorological year 3 (TMY3) files for energy simulations. Results include heating and cooling loads for individual components of each building. Component loads describe the heating/cooling load that can be attributed to specific elements of a home, such as heat transfer through walls or internal gains. Additionally, these results include the standard ResStock outputs for housing characteristics and numerous energy outputs by end-use and fuel. A snapshot of the ResStock version used to produce this data, including a configuration file for the run can be found using the Source Code resource link.

Array↗
DOE OSTI2020

Computational Optimization of A 3D Printed Collimator

This contribution describes the computational methodology behind an optimization procedure for a scattered beam collimator. The workflow includes producing a file that can be manufactured via additive methods. A conical collimator, optimized for neutron diffraction experiments in a high pressure clamp cell, is presented as an example. In such a case the scattering from the sample is much smaller than that of the pressure cell. Monte Carlo Ray tracing in MCViNE was used to model scattering from a Si powder sample and the cell. A collimator was inserted into the simulation and the number and size of channels were optimized to maximize the rejection of the parasitic signal coming from the complex sample environment. Constraints, provided by the additive manufacturing process as well as a specific neutron diffractometer, were also included in the optimization. The source code and the tutorials are available in c3dp (Islam (2019)).

74 ATOMIC AND MOLECULAR PHYSICS↗
DOE OSTI2025

The Blending ToolKit: A simulation framework for evaluation of galaxy detection and deblending

We present an open source Python library for simulating overlapping (i.e., blended) images of galaxies and performing self-consistent comparisons of detection and deblending algorithms based on a suite of metrics. The package, named Blending Toolkit (BTK), serves as a modular, flexible, easy-to-install, and simple-to-use interface for exploring and analyzing systematic effects related to blended galaxies in cosmological surveys such as the Vera Rubin Observatory Legacy Survey of Space and Time (LSST). BTK has three main components: (1) a set of modules that perform fast image simulations of blended galaxies, using the open source image simulation package GalSim; (2) a module that standardizes the inputs and outputs of existing deblending algorithms; (3) a library of deblending metrics commonly defined in the galaxy deblending literature. In combination, these modules allow researchers to explore the impacts of galaxy blending in cosmological surveys. Additionally, BTK provides researchers who are developing a new deblending algorithm a framework to evaluate algorithm performance and make principled comparisons with existing deblenders. BTK includes a suite of tutorials and comprehensive documentation. The source code is publicly available on GitHub at https://github.com/LSSTDESC/BlendingToolKit.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2017

SPRUCE Data-constrained Projections of Methane Fluxes in a Northern Minnesota Peatland in Response to Elevated CO2 and Warming: Modeling Archive

This modeling archive dataset contains results from a study developed a data-informed process-based model using methane chamber measurement data from the Spruce and Peatland Responses Under Changing Environments (SPRUCE) experimental site within the Marcell Experimental Forest in northern Minnesota, USA. The study used existing manual CH4 flux measurements collected from the ambient environment from 2011-2014 and developed a data-informed process-based methane module. The module was incorporated into the Terrestrial ECOsystem (TECO) model before its parameters were constrained with multiple years of methane flux data for forecasting CH4 emission under five warming and two elevated CO2 experimental treatments at SPRUCE. This effort modeled wetland methane (CH4) fluxes with process modeling to better understand uncertainties and the effects of increased temperature and carbon dioxide (CO2) on methane fluxes. Ma et al. (2017) contains results from this modeling effort. This dataset contains 6 files: (1) a user guide in PDF (*.pdf) format, (2) a readme in PDF (*.pdf) format, (3) the posterior distribution of parameters values in comma-separate values (*.csv) format, (4) a compressed (*.zip) folder containing model simulated results of methane emission for different pathways under different environmental conditions, (5) source code of the TECO model used in the study in Fortran 90 (*.f90) format, and (6) a file-level metadata file in comma-separate values (*.csv). In the August 2026 update to this dataset, the associated Fortran 90 code script, TECO_SPRUCE_ME.f90, and a user guide were added to this dataset. Two file names were changed: 2.Posterior_distribution.csv to 2_Posterior_distribution.csv and 3.Simulations_data.zip to 3_Simulations_data.zip and Files_1_3_legends is now provided as a PDF (*.pdf) instead of in Microsoft Word format.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2019

Exponential Strong Converse for Successive Refinement with Causal Decoder Side Information

We consider the k-user successive refinement problem with causal decoder side information and derive an exponential strong converse theorem. The rate-distortion region for the problem can be derived as a straightforward extension of the two-user case by Maor and Merhav (2008). We show that for any rate-distortion tuple outside the rate-distortion region of the k-user successive refinement problem with causal decoder side information, the joint excess-distortion probability approaches one exponentially fast. Our proof follows by judiciously adapting the recently proposed strong converse technique by Oohama using the information spectrum method, the variational form of the rate-distortion region and Hölder’s inequality. The lossy source coding problem with causal decoder side information considered by El Gamal and Weissman is a special case (k = 1) of the current problem. Therefore, the exponential strong converse theorem for the El Gamal and Weissman problem follows as a corollary of our result.

42 ENGINEERING↗
DOE OSTI2016

STELLAR POPULATION SYNTHESIS BASED MODELING OF THE MILKY WAY USING ASTEROSEISMOLOGY OF 13,000 KEPLER RED GIANTS

With current space-based missions it is now possible to obtain age-sensitive asteroseismic information for tens of thousands of red giants. This provides a promising opportunity to study the Galactic structure and evolution. We use asteroseismic data of red giants, observed by Kepler, to test the current theoretical framework of modeling the Galaxy based on population synthesis modeling and the use of asteroseismic scaling relations for giants. We use the open source code Galaxia to model the Milky Way and find the distribution of the masses predicted by Galaxia to be systematically offset with respect to the seismically inferred observed masses. The Galactic model overestimates the number of low-mass stars, and these stars are predominantly old and of low metallicity. Using corrections to the Δν scaling relation suggested by stellar models significantly reduces the disagreement between predicted and observed masses. For a few cases where non-seismic mass estimates are available, the corrections to Δν also improve the agreement between seismic and non-seismic mass estimates. The disagreement between predictions of the Galactic model and the observations is most pronounced for stars with [Fe/H]<−0.5 and [Fe/H]>0 or for T{sub eff}>4700 K. Altering the star formation rate in order to suppress stars older than 10 Gyr improves the agreement for mass but leads to inconsistent color distributions. We also tested the predictions of the TRILEGAL Galactic model. However, unlike Galaxia, it had difficulties in reproducing the photometric properties of the Kepler Input Catalog because it overestimates the number of blue stars. We conclude that either the scaling relations and/or the Galactic models need to be revised to reconcile predictions of theory with asteroseismic observations.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2016

The boss emission-line lens survey. III. Strong lensing of Lyα emitters by individual galaxies

We introduce the Baryon Oscillation Spectroscopic Survey (BOSS) Emission-Line Lens Survey GALaxy-Lyα EmitteR sYstems (BELLS GALLERY) Survey, which is a Hubble Space Telescope program to image a sample of galaxy-scale strong gravitational lens candidate systems with high-redshift Lyα emitters (LAEs) as the background sources. The goal of the BELLS GALLERY Survey is to illuminate dark substructures in galaxy-scale halos by exploiting the small-scale clumpiness of rest-frame far-UV emission in lensed LAEs, and to thereby constrain the slope and normalization of the substructure-mass function. In this paper, we describe in detail the spectroscopic strong-lens selection technique, which is based on methods adopted in the previous Sloan Lens ACS (SLACS) Survey, BELLS, and SLACS for the Masses Survey. We present the BELLS GALLERY sample of the 21 highest-quality galaxy–LAE candidates selected from ≈1.4×10{sup 6} galaxy spectra in the BOSS of the Sloan Digital Sky Survey III. These systems consist of massive galaxies at redshifts of approximately 0.5 strongly lensing LAEs at redshifts from 2–3. The compact nature of LAEs makes them an ideal probe of dark substructures, with a substructure-mass sensitivity that is unprecedented in other optical strong-lens samples. The magnification effect from lensing will also reveal the structure of LAEs below 100 pc scales, providing a detailed look at the sites of the most concentrated unobscured star formation in the universe. The source code used for candidate selection is available for download as a part of this release.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2017

Forward Modeling of Large-scale Structure: An Open-source Approach with Halotools

Here, we present the first stable release of Halotools (v0.2), a community-driven Python package designed to build and test models of the galaxy-halo connection. Halotools provides a modular platform for creating mock universes of galaxies starting from a catalog of dark matter halos obtained from a cosmological simulation. The package supports many of the common forms used to describe galaxy-halo models: the halo occupation distribution (HOD), the conditional luminosity function (CLF), abundance matching, and alternatives to these models that include effects such as environmental quenching or variable galaxy assembly bias. Satellite galaxies can be modeled to live in subhalos, or to follow custom number density profiles within their halos, including spatial and/or velocity bias with respect to the dark matter profile. Here, the package has an optimized toolkit to make mock observations on a synthetic galaxy population, including galaxy clustering, galaxy-galaxy lensing, galaxy group identification, RSD multipoles, void statistics, pairwise velocities and others, allowing direct comparison to observations. Halotools is object-oriented, enabling complex models to be built from a set of simple, interchangeable components, including those of your own creation.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗
DOE OSTI2022

The Astronomy Commons Platform: A Deployable Cloud-based Analysis Platform for Astronomy

Abstract We present a scalable, cloud-based science platform solution designed to enable next-to-the-data analyses of terabyte-scale astronomical tabular data sets. The presented platform is built on Amazon Web Services (over Kubernetes and S3 abstraction layers), utilizes Apache Spark and the Astronomy eXtensions for Spark for parallel data analysis and manipulation, and provides the familiar JupyterHub web-accessible front end for user access. We outline the architecture of the analysis platform, provide implementation details and rationale for (and against) technology choices, verify scalability through strong and weak scaling tests, and demonstrate usability through an example science analysis of data from the Zwicky Transient Facility’s 1Bn+ light-curve catalog. Furthermore, we show how this system enables an end user to iteratively build analyses (in Python) that transparently scale processing with no need for end-user interaction. The system is designed to be deployable by astronomers with moderate cloud engineering knowledge, or (ideally) IT groups. Over the past 3 yr, it has been utilized to build science platforms for the DiRAC Institute, the ZTF partnership, the LSST Solar System Science Collaboration, and the LSST Interdisciplinary Network for Collaboration and Computing, as well as for numerous short-term events (with over 100 simultaneous users). In a live demo instance, the deployment scripts, source code, and cost calculators are accessible. 4 4 http://hub.astronomycommons.org/

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2016

gPhoton: THE GALEX PHOTON DATA ARCHIVE

gPhoton is a new database product and software package that enables analysis of GALEX ultraviolet data at the photon level. The project’s stand-alone, pure-Python calibration pipeline reproduces the functionality of the original mission pipeline to reduce raw spacecraft data to lists of time-tagged, sky-projected photons, which are then hosted in a publicly available database by the Mikulski Archive at Space Telescope. This database contains approximately 130 terabytes of data describing approximately 1.1 trillion sky-projected events with a timestamp resolution of five milliseconds. A handful of Python and command-line modules serve as a front end to interact with the database and to generate calibrated light curves and images from the photon-level data at user-defined temporal and spatial scales. The gPhoton software and source code are in active development and publicly available under a permissive license. We describe the motivation, design, and implementation of the calibration pipeline, database, and tools, with emphasis on divergence from prior work, as well as challenges created by the large data volume. We summarize the astrometric and photometric performance of gPhoton relative to the original mission pipeline. For a brief example of short time-domain science capabilities enabled by gPhoton, we show new flares from the known M-dwarf flare star CR Draconis. The gPhoton software has permanent object identifiers with the ASCL (ascl:1603.004) and DOI (doi:10.17909/T9CC7G). This paper describes the software as of version v1.27.2.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2017

QSL Squasher: A Fast Quasi-separatrix Layer Map Calculator

Quasi-Separatrix Layers (QSLs) are a useful proxy for the locations where current sheets can develop in the solar corona, and give valuable information about the connectivity in complicated magnetic field configurations. However, calculating QSL maps, even for two-dimensional slices through three-dimensional models of coronal magnetic fields, is a non-trivial task, as it usually involves tracing out millions of magnetic field lines with immense precision. Thus, extending QSL calculations to three dimensions has rarely been done until now. In order to address this challenge, we present QSL Squasher—a public, open-source code, which is optimized for calculating QSL maps in both two and three dimensions on graphics processing units. The code achieves large processing speeds for three reasons, each of which results in an order-of-magnitude speed-up. (1) The code is parallelized using OpenCL. (2) The precision requirements for the QSL calculation are drastically reduced by using perturbation theory. (3) A new boundary detection criterion between quasi-connectivity domains is used, which quickly identifies possible QSL locations that need to be finely sampled by the code. That boundary detection criterion relies on finding the locations of abrupt field-line length changes, which we do by introducing a new Field-line Length Edge (FLEDGE) map. We find FLEDGE maps useful on their own as a quick-and-dirty substitute for QSL maps. QSL Squasher allows construction of high-resolution 3D FLEDGE maps in a matter of minutes, which is two orders of magnitude faster than calculating the corresponding 3D QSL maps. We include a sample of calculations done using QSL Squasher to demonstrate its capabilities as a QSL calculator, as well as to compare QSL and FLEDGE maps.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2022

Autodifferentiable Spectrum Model for High-dispersion Characterization of Exoplanets and Brown Dwarfs

We present an autodifferentiable spectral modeling of exoplanets and brown dwarfs. This model enables a fully Bayesian inference of the high-dispersion data to fit the ab initio line-by-line spectral computation to the observed spectrum by combining it with the Hamiltonian Monte Carlo in recent probabilistic programming languages. An open-source code, ExoJAX, developed in this study, was written in Python using the GPU/TPU compatible package for automatic differentiation and accelerated linear algebra, JAX. We validated the model by comparing it with existing opacity calculators and a radiative transfer code and found reasonable agreements for the output. As a demonstration, we analyzed the high-dispersion spectrum of a nearby brown dwarf, Luhman 16 A, and found that a model including water, carbon monoxide, and H 2 /He collision-induced absorption was well fitted to the observed spectrum (R = 10 5 and 2.28-2.30 μm). As a result, we found that T0 = 1295$^{-32}_{+35}$ K at 1 bar and C/O = 0.62 ± 0.03, which is slightly higher than the solar value. This work demonstrates the potential of a full Bayesian analysis of brown dwarfs and exoplanets as observed by high-dispersion spectrographs and also directly imaged exoplanets as observed by high-dispersion coronagraphy.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2014

Quantitative Methods for Comparing Different Polyline Stream Network Models

Two techniques for exploring relative horizontal accuracy of complex linear spatial features are described and sample source code (pseudo code) is presented for this purpose. The first technique, relative sinuosity, is presented as a measure of the complexity or detail of a polyline network in comparison to a reference network. We term the second technique longitudinal root mean squared error (LRMSE) and present it as a means for quantitatively assessing the horizontal variance between two polyline data sets representing digitized (reference) and derived stream and river networks. Both relative sinuosity and LRMSE are shown to be suitable measures of horizontal stream network accuracy for assessing quality and variation in linear features. Both techniques have been used in two recent investigations involving extracting of hydrographic features from LiDAR elevation data. One confirmed that, with the greatly increased resolution of LiDAR data, smaller cell sizes yielded better stream network delineations, based on sinuosity and LRMSE, when using LiDAR-derived DEMs. The other demonstrated a new method of delineating stream channels directly from LiDAR point clouds, without the intermediate step of deriving a DEM, showing that the direct delineation from LiDAR point clouds yielded an excellent and much better match, as indicated by the LRMSE.

58 GEOSCIENCES↗
DOE OSTI2025

2025 TEM Workshop

The TEM Data Management Workshop will take place on August 26 from 9 a.m. to 12 p.m. MT, and will be held virtually on TEAMS. The primary goal of this workshop is to engage NSUF users and stakeholders in discussions about the data needs for the utilization of AI and ML in the analysis of TEM data. Key topics to be covered include data storage, data sharing, data tagging, metadata inclusion, standardized data formats, data augmentation, and annotated training datasets. Additionally, the workshop will provide valuable insights into resources such as the Nuclear Research Data System (NRDS) for data storage and sharing, as well as open-source codes for data analysis.

Bachhav, Mukesh↗