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At least 631 records · Page 35

Genome-wide transcriptional regulation in Saccharomyces cerevisiae in response to carbon dioxide

Sugar metabolism by Saccharomyces cerevisiae produces ample amounts of CO 2 under both aerobic and anaerobic conditions. High solubility of CO 2 in fermentation media, contributing to enjoyable sensory properties of sparkling wine and beers by S. cerevisiae, might affect yeast metabolism. To elucidate the overlooked effects of CO 2 on yeast metabolism, we examined glucose fermentation by S. cerevisiae under CO 2 as compared to N 2 and O 2 limited conditions. While both CO 2 and N 2 conditions are considered anaerobic, less glycerol and acetate but more ethanol were produced under CO 2 condition. Transcriptomic analysis revealed that significantly decreased mRNA levels of GPP1 coding for glycerol-3-phosphate phosphatase in glycerol synthesis explained the reduced glycerol production under CO 2 condition. Besides, transcriptional regulations in signal transduction, carbohydrate synthesis, heme synthesis, membrane and cell wall metabolism, and respiration were detected in response to CO 2 . Interestingly, signal transduction was uniquely regulated under CO 2 condition, where upregulated genes (STE3, MSB2, WSC3, STE12, and TEC1) in the signal sensors and transcriptional factors suggested that MAPK signaling pathway plays a critical role in CO 2 sensing and CO 2 -induced metabolisms in yeast. Furthermore, our study identifies CO 2 as an external stimulus for modulating metabolic activities in yeast and a transcriptional effector for diverse applications.

59 BASIC BIOLOGICAL SCIENCES↗

Infrasound Detections of Low-Magnitude Earthquakes: Preliminary Results of the West Texas Acoustic Experiment

Infrasound observations have grown increasingly important for the monitoring of earthquakes. While large earthquakes generate infrasound that can be detected thousands of kilometers away, there are few near-field observations of infrasound generated by low-magnitude events. We describe preliminary results of the West Texas Acoustic Experiment, during which infrasound sensors collected continuous data in the Permian Basin for a six-month period spanning January—June 2023. During this time, more than 1000 earthquakes with magnitudes between 1.2 and 4.2 occurred within 50 km of the network. We used spectral analysis, array processing, and manual inspection of waveforms to evaluate arrivals of infrasound signals following 84 events with magnitudes between 2.5 and 4.2. Here, we describe eight such events and the infrasound signals associated with each. We find detections of seismic-to-acoustic infrasound signals associated with seven events. We also find strong evidence of a laterally-propagating, purely acoustic wave generated by an M2.9 earthquake.

58 GEOSCIENCES↗

Low-frequency Electromagnetic Detection Limits of Underground Nuclear Explosions

Underground nuclear explosions produce a broadband electromagnetic signal that can propagate to the surface at some distance. We perform a logistic regression on historical electromagnetic detections to calculate a probabilistic detection curve for prediction of the propagation distance for any given underground nuclear explosion. The curve predicts positive detections at scaled ranges of 2414.6, 2025.7, 1908.3, and 1672.4 m/ktonne 1/3 at probabilities of 50, 90, 95 and 99%, respectively. For a theoretical 100 ktonne underground nuclear explosion these scaled ranges translate to absolute ranges of 11.2, 9.4, 8.9, and 7.8 km at probabilities of 50, 90, 95 and 99%, respectively. We also motivate a need for improved electromagnetic sensor design and deployment by extending the detection analysis using the quoted signal-to-noise ratio of two and noise amplitude of 10 pT along with attenuation relationships that go as 1/r to 1/r 3 . We find that reducing the noise floor by a factor often could extend the detection limit to approximately 5 to 25 km/ktonne 1/3 , which translates to 24 to 112 km for a theoretical 100 ktonne underground nuclear explosion.

58 GEOSCIENCES↗

Multi-module-based CVAE to predict HVCM faults in the SNS accelerator

We present a multi-module framework based on Conditional Variational Autoencoder (CVAE) to detect anomalies in the power signals coming from multiple High Voltage Converter Modulators (HVCMs). We condition the model with the specific modulator type to capture different representations of the $\mathcal{normal}$ waveforms and to improve the sensitivity of the model to identify a specific type of fault when we have limited samples for a given module type. We studied several Artificial Neural Network (ANN) architectures for our CVAE model and evaluated the model performance by looking at their loss landscape for stability and generalization. Our results for the Spallation Neutron Source (SNS) experimental data show that the trained model generalizes well to detecting multiple fault types for several HVCM module types. The results of this study can be used to improve the HVCM reliability and overall SNS uptime.

43 PARTICLE ACCELERATORS↗

Computational Prediction of Infrasound Arrival Times and Directions from Stationary and Moving Impulsive Sources

This report addresses the need to predict infrasound signal arrival times and back azimuths at monitoring stations, enabling more focused and efficient searches within recorded waveform data. The primary challenge is estimating expected signal arrival windows for stationary and moving acoustic sources, such as chemical explosions, volcanic eruptions, meteoroids, and spacecraft re-entry events. To address this challenge, a reproducible methodology is described that uses simplified propagation speeds for boundary layer, tropospheric, stratospheric, and thermospheric atmospheric waveguides. While the Python source code itself is not freely available, this document provides detailed, step-by-step instructions, and equations enabling users to replicate and adapt the method independently. The method reliably predicts signal arrival intervals and back azimuths, thereby supporting rapid detection and accurate interpretation of infrasound events. Results demonstrate that this method effectively identifies plausible signal arrival intervals and directions, facilitating faster event detection and more reliable interpretation. This methodology directly supports atmospheric monitoring, planetary defense, and forensic analysis of explosive atmospheric events.

47 OTHER INSTRUMENTATION↗

Search for Lensing Signatures in the Gravitational-Wave Observations from the First Half of LIGO–Virgo’s Third Observing Run

Here, we search for signatures of gravitational lensing in the gravitational-wave signals from compact binary coalescences detected by Advanced Laser Interferometer Gravitational-wave Observatory (LIGO) and Advanced Virgo during O3a, the first half of their third observing run. We study: (1) the expected rate of lensing at current detector sensitivity and the implications of a non-observation of strong lensing or a stochastic gravitational-wave background on the merger-rate density at high redshift; (2) how the interpretation of individual high-mass events would change if they were found to be lensed; (3) the possibility of multiple images due to strong lensing by galaxies or galaxy clusters; and (4) possible wave-optics effects due to point-mass microlenses. Several pairs of signals in the multiple-image analysis show similar parameters and, in this sense, are nominally consistent with the strong lensing hypothesis. However, taking into account population priors, selection effects, and the prior odds against lensing, these events do not provide sufficient evidence for lensing. Overall, we find no compelling evidence for lensing in the observed gravitational-wave signals from any of these analyses.

79 ASTRONOMY AND ASTROPHYSICS↗

Cepstral scanning transmission electron microscopy imaging of severe lattice distortions

The development of four-dimensional (4D) scanning transmission electron microscopy (STEM) using fast detectors has opened-up new avenues for addressing some of longstanding challenges in electron imaging. One of these challenges is how to image severely distorted crystal lattices, such as at a dislocation core. Here we develop a new 4D-STEM technique, called Cepstral STEM, for imaging disordered crystals using electron diffuse scattering. In contrast to analysis based on Bragg diffraction, which measures the average and periodic scattering potential, electron diffuse scattering can detect fluctuations caused by crystal disorder. Local fluctuations of diffuse scattering are captured by scanning electron nanodiffraction (SEND) using a coherent probe. The harmonic signals in electron diffuse scattering are detected through Cepstral analysis and used for imaging. By integrating Cepstral analysis with 4D-STEM, we demonstrate that information about the distortive part of electron scattering potential can be separated and imaged at nm spatial resolution. Here, we apply the technique to the analysis of a dislocation core in SiGe and lattice distortions in a high entropy alloy.

36 MATERIALS SCIENCE↗

Standoff Detection of Chemical Plumes Using Swept-ECQCL Remote Detection Technology: Results from EMRTC Complex Terrain Dual Tracer Experiment

As part of the Complex Terrain Dual Tracer Experiments performed in support of the LYNM program, a swept-wavelength external cavity quantum cascade laser (swept-ECQCL) remote detection system was deployed to measure chemical plume propagation with high temporal resolution. The swept-ECQCL remote detection technology was initially developed at PNNL, and is now under further development at Opticslah, LLC under SBIR funding from DOE (DOE SBIR Phase I Project DE-SC0019855, Remote Detection Technologies, Program Manager Chris Ramos). The swept-ECQCL technology provides a single-frequency infrared laser source which is rapidly scanned over a large wavelength range to measure the infrared absorption of gases, liquids, or solids. Analysis of the measured infrared absorption spectrum is used to detect, identify, and quantify the chemical species which are present. While most previous laser-based techniques used small wavelength tuning ranges to measure only a few isolated spectral lines of a few species, the swept-ECQCL provides the large tuning range needed to measure multiple species simultaneously, and to detect broad absorption features from large molecules or condensed phase materials. In addition, the swept-ECQCL systems have high enough spectral resolution and sensitivity to measure narrow lines of small molecules and determine isotope ratios. The remote detection system for gas plumes is based on the swept-ECQCL technology, and consists of a swept-ECQCL source, infrared detector, control electronics, and beam transmitting and alignment optics. The remote detection system directs the infrared output of the swept-ECQCL to a target retro reflector typically located at ~10-10,000 m distance. The swept-ECQCL wavelength is varied continuously over a large wavelength range (>1000 nm) at rates up to 1000 Hz. The swept ECQCL light reflected from the remote target is collected and focused onto an infrared photodetector. By measuring the detector signal continuously as the swept-ECQCL wavelength is varied, a time-series of absorption spectra are measured for the gases along the beam line of-sight. Based on analysis and fitting of the measured absorption spectra, the time-dependent chemical concentrations of species are determined. Multiple species and mixtures can be detected simultaneously, for all species with absorption features above the sensor noise floor. The sensor output is thus a continuous, high-speed record of identified chemicals along with their concentrations and isotope ratios of interest. The high-speed operation enables low-noise operation in conditions of atmospheric turbulence and allows tracking of fluctuating concentrations in transient chemical plumes as needed for reliable remote detection applications. All components operate with minimal cooling requirements and no cryogens are needed. In addition, the output infrared light is invisible with an intensity below the maximum permissible exposure (MPE) threshold of 100 mW/cm2 for these infrared wavelengths and thus eye safe. The measurement concept for plume detection using the swept-ECQCL remote detection system is as follows. The ECQCL beam is directed toward a remote retro-reflector, which reflects the beam back to the ECQCL system where it is focused onto an infrared photodetector. The line-of-sight from the ECQCL system to the retro-reflector defines the measurement path. The detected infrared signal is recorded continuously and detects the absorption of molecular species along the measurement path. Before a plume release, the system measures absorption from atmospheric constituents, which in this LWIR band consist primarily of lines from H 2 O and CO 2 , with additional weaker absorption from N 2 O, NH 3 , and O 3 possibly contributing. The system then measures any changes in absorption due to the tracer compounds when they enter the measurement path. The shape of absorption features is used to distinguish and identify the different tracer compounds, and the strength of the absorption is used to determine the path-integrated concentration – also called the column density.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Reviving MeV-GeV indirect detection with inelastic dark matter

Thermal relic dark matter below ∼ 10 GeV is excluded by cosmic microwave background data if its annihilation to visible particles is unsuppressed near the epoch of recombination. Usual model-building measures to avoid this bound involve kinematically suppressing the annihilation rate in the low-velocity limit, thereby yielding dim prospects for indirect detection signatures at late times. In this work, we investigate a class of cosmologically viable sub-GeV thermal relics with late-time annihilation rates that are detectable with existing and proposed telescopes across a wide range of parameter space. We study a representative model of inelastic dark matter featuring a stable state χ 1 and a slightly heavier excited state χ 2 whose abundance is thermally depleted before recombination. Since the kinetic energy of dark matter in the Milky Way is much larger than it is during recombination, χ 1 χ 1 → χ 2 χ 2 upscattering can efficiently regenerate a cosmologically long-lived Galactic population of χ 2 , whose subsequent coannihilations with χ 1 give rise to observable gamma-rays in the ∼ 1 MeV − 100 MeV energy range. We find that proposed MeV gamma-ray telescopes, such as e-ASTROGAM, AMEGO, and MAST, would be sensitive to much of the thermal relic parameter space in this class of models and thereby enable both discovery and model discrimination in the event of a signal at accelerator or direct detection experiments. Published by the American Physical Society 2024

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

How Bright in Gravitational Waves are Millisecond Pulsars for the Galactic Center GeV Gamma-Ray Excess? A Systematic Study

The existence of dark matter (DM) is supported by various macroscopic observations, but its microscopic nature remains elusive. The Galactic Center GeV gamma-ray excess (GCE) has been a leading candidate signal for particle dark matter annihilation. However, an unresolved population of millisecond pulsars (MSPs) in the bulge provides the alternative explanation for the excess. Identifying these MSPs in electromagnetic bands is difficult due to source confusion, pulse broadening, and extinction. Gravitational waves (GWs) provide a complementary probe: a steadily rotating, non-axisymmetric MSP emits a nearly monochromatic GW signal in the sensitive band of ground-based detectors, with amplitude set by its ellipticity. In this work, we systematically investigate the GW emission from the MSP population proposed to explain the GCE and its detectability with current and future detectors. We consider three major scenarios for the origin of ellipticity and model the population properties of these MSPs. We also consider both isolated MSPs and MSPs in binary systems, as well as Doppler effects in the detection. We find that while the signal is below the reach of current interferometers, next-generation detectors such as the Einstein Telescope (ET) and Cosmic Explorer (CE) can detect a fraction of those MSPs, offering a novel test of the MSP interpretation of the GCE. Future directed searches toward the Galactic Center with continued improvements in sensitivities will either uncover this long-sought MSP population or place stringent limits on their ellipticities and abundance, with important implications for both the astrophysical and dark-matter interpretations of the GCE.

Lei, Ming-Yu [Purple Mountain Observ.; USTC, Hefei↗

Forward Modeling the Orbits of Companions to Pulsating Stars from Their Light Travel Time Variations

Mutual gravitation between a pulsating star and an orbital companion leads to a time-dependent variation in path length for starlight traveling to Earth. These variations can be used for coherently pulsating stars, such as the δ Scuti variables, to constrain the masses and orbits of their companions. Observing these variations for δ Scuti stars has previously relied on subdividing the light curve and measuring the average pulsation phase in equally sized subdivisions, which leads to undersampling near periapsis. We introduce a new approach that simultaneously forward models each sample in the light curve and show that this method improves upon current sensitivity limits—especially in the case of highly eccentric and short-period binaries. We find that this approach is sensitive enough to observe Jupiter mass planets around δ Scuti stars under ideal conditions, and use gravity-mode pulsations in the subdwarf B star KIC 7668647 to detect its companion without radial velocity data. We further provide robust detection limits as a function of the signal-to-noise ratio of the pulsation mode and determine that the minimum detectable light travel time amplitude for a typical Kepler δ Scuti is around 2 s. This new method significantly enhances the application of light travel time variations to detecting short-period binaries with pulsating components, and pulsating A-type exoplanet host stars, especially as a tool for eliminating false positives.

79 ASTRONOMY AND ASTROPHYSICS↗

Demonstration of VOC Fenceline Sensors and Canister Grab Sampling near Chemical Facilities in Louisville, Kentucky

Experimental fenceline sensor pods (SPods) fitted with 30 s duration canister grab sampling (CGS) systems were deployed at a site near chemical facilities in Louisville, KY, from 4 June 2018 to 5 January 2020. The objective of the study was to better understand lower cost 10.6 eV photoionization detector (PID)-based volatile organic compound (VOC) sensors and investigate their utility for near-source emissions detection applications. Prototype SPods containing PID sensor elements from two different manufacturers yielded between 78% and 86% valid data over the study, producing a dataset of over 120,000 collocated pair fenceline measurements averaged into 5-min datapoints. Ten-second time-resolved SPod data from an elevated fenceline sensor signal day are presented, illustrating source emission detections from the direction of a facility 500 m west of the monitoring site. An SPod-triggered CGS acquired in the emission plume on this day contained elevated concentrations of 1,3-butadiene and cyclohexane (36 parts per billion by volume (ppbv) and 637 ppbv, respectively), compounds known to be emitted by this facility. Elevated concentrations of these compounds were observed in a subset of the 61 manual and triggered CGS grab samples acquired during the study, with winds from the west. Using novel wind-resolved visualization and normalization approaches described herein, the collocated pair SPod datasets exhibited similarity in emission source signature. With winds from the west, approximately 50% of SPod readings were above our defined theoretical detection limit indicating persistent measurable VOC signal at this site. Overall, this 19-month study demonstrated reasonable prototype SPod operational performance indicating that improved commercial forms of lower cost PID sensors could be useful for select VOC fenceline monitoring applications.

1,3-butadiene↗

Coexistent quantum channel characterization using quantum process tomography with spectrally resolved detection

The coexistence of classical and quantum signals over the same optical fiber is critical for quantum networks operating within the existing communications infrastructure. Here, we characterize the quantum channel that results from distributing approximate single-photon polarization-encoded qubits simultaneously with classical light of varying intensities through a 25 km fiber-optic channel. We use spectrally resolved quantum process tomography with a newly developed Bayesian reconstruction method to estimate the quantum channel from experimental data, both with and without classical noise. Furthermore, we show that the coexistent fiber-based quantum channel has high process fidelity with an ideal depolarizing channel if the noise is dominated by Raman scattering. These results aid future development of quantum repeater designs and quantum error-correcting codes which benefit from realistic channel error models.

Chapman, Joseph↗

A Significant Increase in Detection of High-resolution Emission Spectra Using a Three-dimensional Atmospheric Model of a Hot Jupiter

High-resolution spectroscopy has opened the way for new, detailed study of exoplanet atmospheres. There is evidence that this technique can be sensitive to the complex, three-dimensional (3D) atmospheric structure of these planets. In this work, we perform cross-correlation analysis of high-resolution (R ∼ 100,000) CRIRES/VLT emission spectra of the hot Jupiter HD 209458b. We generate template emission spectra from a 3D atmospheric circulation model of the planet, accounting for temperature structure and atmospheric motions—winds and planetary rotation—missed by spectra calculated from one-dimensional models. In this first-of-its-kind analysis, we find that using template spectra generated from a 3D model produces a more significant detection (6.9σ) of the planet’s signal than any of the hundreds of one-dimensional models we tested (maximum of 5.1σ). We recover the planet’s thermal emission, its orbital motion, and the presence of CO in its atmosphere at high significance. Additionally, we analyzed the relative influences of 3D temperature and chemical structures in this improved detection, including the contributions from CO and H{sub 2}O, as well as the role of atmospheric Doppler signatures from winds and rotation. This work shows that the hot Jupiter’s 3D atmospheric structure has a first-order influence on its emission spectra at high resolution and motivates the use of multidimensional atmospheric models in high-resolution spectral analysis.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Gravitational waves from supercooled phase transitions in conformal Majoron models of neutrino mass

We study supercooled first-order phase transitions above the QCD scale in a wide class of conformal Majoron-like U(1)′ models that explain the totality of active neutrino oscillation data and produce a detectable stochastic gravitational wave background (SGWB) at LIGO, LISA and ET. We place constraints on the U(1)′ breaking scale and gauge coupling using current LIGO-Virgo-Kagra data. We find that strong supercooling can be ruled out in large regions of parameter space if a SGWB is not detected by these experiments. A null signal at LIGO and ET will disfavor a type-I seesaw scale above 10 14 GeV, while a positive signal is a signature of heavy right-handed neutrinos. On the other hand, LISA will be sensitive to seesaw scales as low as a TeV, and could detect a SGWB even if the right-handed neutrinos are decoupled.

early universe particle physics↗

Counting mRNA copies in intact bacterial cells by fluctuation localization imaging-based fluorescence in situ hybridization (fliFISH)

A method for measuring mRNA copies in intact bacterial cells by fluctuation localization imaging-based fluorescence in situ hybridization (fliFISH) is presented. Unlike conventional single molecule FISH, where the presence of a transcript is determined by fluorescence intensity, fliFISH relies on On-Off duty cycles of photo-switching dyes to set a predetermined threshold for distinguishing true signals from background noise. The method provides a quantitative approach for detecting and counting true mRNA copies and rejecting false signals with high accuracy.

Hu, Dehong↗

Seismic monitoring of underground vibration: database of seismic data and ground truth

Seismic waves provide valuable insights into underground activities, serving as an essential tool for monitoring anomalies that could signal containment breaches in geological repositories. We aim to test and refine underground detection and geolocation techniques to identify anomalous vibration signals indicative of potential breaches, thereby strengthening georepository safeguards. We evaluate the effectiveness of two distinct, low-maintenance sensing technologies (surface geophones and underground distributed acoustic sensing (DAS) fiber optic cable) leveraging existing datasets. This report details the experimental designs, instrumentation, and data characteristics for both seismic and DAS arrays. Additionally, we provide a ground truth database documenting relevant operational activities for each experiment.

58 GEOSCIENCES↗

Contribution from TeV halos to the isotropic gamma-ray background

We report recent observations have shown that pulsars are surrounded by extended regions which emit TeV-scale gamma rays through the inverse Compton scattering of very high energy electrons and positrons. Such TeV halos are responsible for a large fraction of the Milky Way’s TeV-scale gamma-ray emission. In this paper, we calculate the gamma-ray spectrum from the population of TeV halos located within the Andromeda Galaxy, predicting a signal that is expected to be detectable by the Cherenkov Telescope Array. We also calculate the contribution from TeV halos to the isotropic gamma-ray background, finding that these sources should contribute significantly to this flux at the highest measured energies, constituting up to ~20 % of the signal observed above ~0.1TeV. We also comment on the implications of our results for the origin of the diffuse neutrino flux detected by IceCube.

79 ASTRONOMY AND ASTROPHYSICS↗