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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 631 records · Page 35
All sourcesNASA NTRSDOE OSTI
DOE OSTI2026

Organo-mineral interactions in active layer and permafrost soils along aging Arctic landscapes

Rising temperatures are accelerating permafrost thaw, exposing large soil organic carbon (SOC) stocks to microbial decomposition with implications for global climate. Understanding how permafrost carbon is stored and protected through associations with minerals is critical for predicting its vulnerability to decomposition upon thaw. However, how landscape age, substrate chemistry, and soil depth influence mineral associations remain relatively unexplored. We investigated organo-mineral associations in active layer and permafrost soils across a landscape age and geochemical gradient on Alaska’s North Slope, spanning three glaciated (~11,500–125,000 years) and one unglaciated site. Using selective dissolution extractions, X-ray diffraction, and Mössbauer spectroscopy, we characterized minerals and their relationship with SOC. The three recently deglaciated sites had low soil pH that decreased with age and greater abundances of pyrophosphate- and oxalate-extractable Al and Fe, whereas the oldest unglaciated site exhibited near-neutral pH, greater pyrophosphate-extractable Ca, and distinct mineralogy. Across sites, SOC was positively associated with Al and Fe mineral phases, with stronger relationships in acidic soils. Pyrophosphate-extractable Ca also showed strong relationships with SOC at the acidic sites (up to ~10x greater), suggesting that Ca-mediated protection may operate beyond traditionally recognized high-pH soils. Permafrost soils showed depth-related changes in pH, SOC, and Fe mineralogy, suggesting chemically active, heterogeneous layers may shape mineral dynamics and associated carbon. Our results highlight how landscape age, parent material, and depth create distinct geochemical environments that govern mineral-organic associations. As thaw exposes soil to new conditions, these mineral-mediated protection mechanisms may be altered, potentially affecting the permafrost carbon-climate feedback.

Synthetic Biology↗
DOE OSTI2023

A novel class of broad-spectrum active-site-directed 3C-like protease inhibitors with nanomolar antiviral activity against highly immune-evasive SARS-CoV-2 Omicron subvariants

Antivirals with broad coronavirus activity are important for treating high-risk individuals exposed to the constantly evolving SARS-CoV-2 variants of concern (VOCs) as well as emerging drug-resistant variants. We developed and characterized a novel class of active-site-directed 3-chymotrypsin-like protease (3CLpro) inhibitors (C2-C5a). Our lead direct-acting antiviral (DAA), C5a, is a non-covalent, non-peptide with a dissociation constant of 170 nM against recombinant SARS-CoV-2 3CLpro. The compounds C2-C5a exhibit broad-spectrum activity against Omicron subvariants (BA.5, BQ.1.1, and XBB.1.5) and seasonal human coronavirus-229E infection in human cells. Notably, C5a has median effective concentrations of 30-50 nM against BQ.1.1 and XBB.1.5 in two different human cell lines. X-ray crystallography has confirmed the unique binding modes of C2-C5a to the 3CLpro, which can limit virus cross-resistance to emerging Paxlovid-resistant variants. We tested the effect of C5a with two of our newly discovered host-directed antivirals (HDAs): N-0385, a TMPRSS2 inhibitor, and bafilomycin D (BafD), a human vacuolar H+-ATPase [V-ATPase] inhibitor. We demonstrated a synergistic action of C5a in combination with N-0385 and BafD against Omicron BA.5 infection in human Calu-3 lung cells. Our findings underscore that a SARS-CoV-2 multi-targeted treatment for circulating Omicron subvariants based on DAAs (C5a) and HDAs (N-0385 or BafD) can lead to therapeutic benefits by enhancing treatment efficacy. Furthermore, the high-resolution structures of SARS-CoV-2 3CLpro in complex with C2-C5a will facilitate future rational optimization of our novel broad-spectrum active-site-directed 3C-like protease inhibitors.

3CLpro inhibitor↗
DOE OSTI2020

Caught in the H inact : Crystal Structure and Spectroscopy Reveal a Sulfur Bound to the Active Site of an O 2 -stable State of [FeFe] Hydrogenase

[FeFe] hydrogenases are the most active H 2 converting catalysts in nature, but their extreme oxygen sensitivity limits their use in technological applications. The [FeFe] hydrogenases from sulfate reducing bacteria can be purified in an O 2 -stable state called H inact . To date, the structure and mechanism of formation of H inact remain unknown. Our 1.65 Å crystal structure of this state reveals a sulfur ligand bound to the open coordination site. Furthermore, in-depth spectroscopic characterization by X-ray absorption spectroscopy (XAS), nuclear resonance vibrational spectroscopy (NRVS), resonance Raman (RR) spectroscopy and infrared (IR) spectroscopy, together with hybrid quantum mechanical and molecular mechanical (QM/MM) calculations, provide detailed chemical insight into the Hinact state and its mechanism of formation. This may facilitate the design of O 2 -stable hydrogenases and molecular catalysts.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2021

Operando XAS/SAXS: Guiding Design of Single-Atom and Subnanocluster Catalysts

Single-atom and subnanocluster catalysts (SSCs) represent a highly promising class of low-cost materials with high catalytic activity and high atom-utilization efficiency. However, SSCs are susceptible to undergo restructuring during the reactions. Exploring the active sites of catalysts through in situ characterization techniques plays a critical role in studying reaction mechanism and guiding the design of optimum catalysts. In situ X-ray absorption spectroscopy/small-angle X-ray scattering (XAS/SAXS) is promising and widely used for monitoring electronic structure, atomic configuration, and size changes of SSCs during real-time working conditions. Unfortunately, there is no detailed summary of XAS/SAXS characterization results of SSCs. The recent advances in applying in situ XAS/SAXS to SSCs are thoroughly summarized in this review, including the atomic structure and oxidation state variations under open circuit and realistic reaction conditions. Furthermore, the reversible transformation of single-atom catalysts (SACs) to subnanoclusters/nanoparticles and the application of in situ XAS/SAXS in subnanoclusters are discussed. To conlcude, the outlooks in modulating the SSCs and developing operando XAS/SAXS for SSCs are highlighted.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2022

A systematic exploration of boceprevir-based main protease inhibitors as SARS-CoV-2 antivirals

Boceprevir is an HCV NSP3 inhibitor that was explored as a repurposed drug for COVID-19. It inhibits the SARS-CoV-2 main protease (M Pro ) and contains an α-ketoamide warhead, a P1 β-cyclobutylalanyl moiety, a P2 dimethylcyclopropylproline, a P3 tert-butylglycine, and a P4 N-terminal tert-butylcarbamide. By introducing modifications at all four positions, we synthesized 20 boceprevir-based M Pro inhibitors including PF-07321332 and characterized their M Pro inhibition potency in test tubes (in vitro) and 293T cells (in cellulo). Crystal structures of M Pro bound with 10 inhibitors and cytotoxicity and antiviral potency of 4 inhibitors were characterized as well. Replacing the P1 site with a β-(S-2-oxopyrrolidin-3-yl)-alanyl (Opal) residue and the warhead with an aldehyde leads to high in vitro potency. The original moieties at P2, P3 and the P4 N-terminal cap positions in boceprevir are better than other tested chemical moieties for high in vitro potency. In crystal structures, all inhibitors form a covalent adduct with the M Pro active site cysteine. Here, the P1 Opal residue, P2 dimethylcyclopropylproline and P4 N-terminal tert-butylcarbamide make strong hydrophobic interactions with M Pro , explaining high in vitro potency of inhibitors that contain these moieties. A unique observation was made with an inhibitor that contains a P4 N-terminal isovaleramide. In its M Pro complex structure, the P4 N-terminal isovaleramide is tucked deep in a small pocket of M Pro that originally recognizes a P4 alanine side chain in a substrate. Although all inhibitors show high in vitro potency, they have drastically different in cellulo potency to inhibit ectopically expressed M Pro in human 293T cells. In general, inhibitors with a P4 N-terminal carbamide or amide have low in cellulo potency. This trend is reversed when the P4 N-terminal cap is changed to a carbamate. The installation of a P3 O-tert-butyl-threonine improves in cellulo potency. Three molecules that contain a P4 N-terminal carbamate were advanced to cytotoxicity tests on 293T cells and antiviral potency tests on three SARS-CoV-2 variants. They all have relatively low cytotoxicity and high antiviral potency with EC 50 values around 1 μM. A control compound with a nitrile warhead and a P4 N-terminal amide has undetectable antiviral potency. Based on all observations, we conclude that a P4 N-terminal carbamate in a boceprevir derivative is key for high antiviral potency against SARS-CoV-2.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2022

Spectroscopic characterization of Mn 2+ and Cd 2+ coordination to phosphorothioates in the conserved A9 metal site of the hammerhead ribozyme

Phosphorothioate modifications have widespread use in the field of nucleic acids. As substitution of sulfur for oxygen can alter metal coordination preferences, the phosphorothioate metal-rescue experiment is a powerful method for identifying metal coordination sites that influence specific properties in a large RNAs. The A9/G10.1 metal binding site of the hammerhead ribozyme (HHRz) has previously been shown to be functionally important through phosphorothioate rescue experiments. While an A9-S Rp substitution is inhibitory in Mg 2+ , thiophilic Cd 2+ rescues HHRz activity. Mn 2+ is also often used in phosphorothioate metal-rescue studies but does not support activity for the A9-S Rp HHRz. Here, we use EPR, electron spin-echo envelope modulation (ESEEM), and X-ray absorption spectroscopic methods to directly probe the structural consequences of Mn 2+ and Cd 2+ coordination to R p and S p phosphorothioate modifications at the A9/G10.1 site in the truncated hammerhead ribozyme (tHHRz). The results demonstrate that while Cd 2+ does indeed bind to S in the thio-substituted ligand, Mn 2+ coordinates to the non–sulfur oxo group of this phosphorothioate, regardless of isomer. Computational models demonstrate the energetic preference of Mn—O over Mn—S coordination in metal-dimethylthiophosphate models. In the case of the tHHRz, the resulting Mn 2+ coordination preference of oxygen in either R p or S p A9 phosphorothioates differentially tunes catalytic activity, with Mn—O coordination in the A9-S Rp phosphorothioate enzyme being inhibitory.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2025

Effects of Particle Mixing and Gravitational Settling on Charge Transport in Carbon Flow-Electrode Cells

Flowable carbon slurries are actively studied and under development for charge transport in various electrochemical systems including flow capacitors, capacitive deionization cells, semi-solid flow batteries, and lithium extraction. However, much less is known about in operando slurry flow dynamics and their corresponding effect on charge transport. We performed an experimental study of mixing and settling dynamics of slurry electrodes within an electrochemical flow cell during continuous operations. The electrochemical cell consisted of two horizontal co-flowing channels, separated by a cation-exchange membrane (CEM). Here we used high-speed optical imaging of planes parallel to gravity and simultaneous electrochemical measurements. At low flow rates, dense yet dynamic particle beds formed on the bottom electrode in each channel, which unexpectedly yielded the highest currents. This approach enables the operation of the flow cell at low system-average particle concentrations while leveraging gravity-driven particle settling to locally enhance carbon concentrations precisely at the current collector sites. Conversely, high flow rates were characterized by thin particle beds and well-mixed particle flows. In the latter case, the electrodes in closest proximity (located on either side of the CEM) achieved a current higher than the other electrode pairs. The observations have implications for slurry control and electrode designs in electrochemical systems.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2023

Solution-Processable Copper Halide Based Hybrid Materials Consisting of Cationic Ligands with Different Coordination Modes

Here, using cationic ligands containing both aromatic and aliphatic coordination sites, we have synthesized and structurally characterized five new CuX-based hybrid materials consisting of anionic inorganic motifs that also form coordinate bonds with the cationic organic ligands. As a result of the unique bonding nature at the inorganic/organic interfaces, these compounds demonstrate strong resistance toward heat and can be readily processed in solution. They emit light in the visible region ranging from cyan to yellow color, with the highest photoluminescence quantum yield (PLQY) reaching 71%. The influence of the different coordination modes of the ligands on their emission behavior was investigated employing both experimental and theoretical methods, which have provided insight in understanding structure–property relationships in these materials and guidelines for tuning and enhancing their chemical and physical properties.

77 NANOSCIENCE AND NANOTECHNOLOGY↗
DOE OSTI2026

Graphene Quantum Dot Composites Embedded with CoZn Alloy Nanoparticles for Enhanced Oxygen Reduction and Evolution Reactions

Developing efficient and durable electrocatalysts for oxygen reduction (ORR) and oxygen evolution reactions (OER) is crucial for energy conversion technologies. In this study, core–shell graphene quantum dot (GQD) composites embedded with Co, Zn, and CoZn alloy nanoparticles were synthesized using a solid-state microwave synthesis method and systematically investigated for their electrochemical performance. The structural and compositional analyses confirm that the integration of transition metal nanoparticles enhances the electronic properties of GQDs, providing abundant active sites and facilitating charge transfer. Electrochemical characterization reveals that GQD-CoZn-3 (GQD:Co:Zn = 10.5:0.5:0.5) exhibits superior ORR and OER catalytic activities, achieving the highest current densities of 205 A g–1 and 102 A g–1 at 100 mV s–1, respectively. These performance values surpass those of pristine GQDs and single-metal (Co or Zn) embedded counterparts, emphasizing the strong synergistic effect between the CoZn alloy and the functionalized carbon framework. Impedance measurements further reveal a substantial reduction in charge-transfer resistance, while chronoamperometry tests demonstrate excellent catalytic stability and CO tolerance, highlighting the robustness of the core–shell GQD structure. These findings provide valuable insights into the design of advanced carbon-based electrocatalysts for energy applications.

Panda, Pradeep Kumar↗
DOE OSTI2025

Inverse Trans Influence and Uranium-Arene σ-Bonding Drive Molecular Geometry: Ligand Modification from Hard to Soft Flips the Oxide from Axial to Equatorial

A rare example of an equatorially bound terminal uranium(V) oxo complex in a chelating sulfur-based ligand environment, namely [(mes( Me,Ad ArS) 3 )U V (O eq )(THF)] (2), is presented. Octahedrally coordinated 2 is obtained by reaction of the mesitylene-anchored tris-thiophenolate-coordinated uranium(III) complex [U III ((SAr Ad,Me ) 3 mes)] (1) with the oxygen-atom transfer reagent N 2 O. The observed, equatorially bound oxo ligand in 2 is in stark contrast to its known tris-aryloxide analog, [(mes( Me,Ad ArO) 3 )U V (O ax )(THF)] (A), where the oxo ligand occupies the typically observed axial coordination site. Complexes 1 and 2 are characterized by single-crystal X-ray diffraction analyses and spectroscopic and magnetochemical methods, including 1 H NMR, UV/vis/NIR electronic absorption, as well as EPR spectroscopy and SQUID magnetometry, thus confirming the C S symmetry and the pentavalent oxidation state of 2. Encompassing quantum chemical calculations (DFT and CASPT2) on 2 and its tris-phenolate analog A, support and rationalize the structural and electronic differences. The molecular orbital pictures show that a stabilizing σ-bonding interaction arising from the U–O eq inverse trans influence (ITI) is present in 2 but missing in A. In 2, the sulfur 3p orbitals are closer in energy to the uranium 5f manifold than the arene π-system, leading to an ITI, while U–arene σ- or δ-bonding is not observed. Although the arene orbitals remain separated from the uranium 5f orbitals in A, the absence of an ITI allows the arene a 2u orbital to engage in a σ-type interaction with the metal. Thus, incorporating a tris-thiophenolate to an arene anchor introduces a new design concept in molecular f-element chemistry. This approach stabilizes an equatorially bound U(V) oxo center, contrasting with its tris-phenolate counterpart, where oxo coordination is axial. The observed geometric divergence, driven by competing ITI and U–arene interactions, not only tunes electronic structure but also leads to differentiated reactivity: only the phenolate analogs activate H 2 O, while the thiolates do not.

Hydrocarbons↗
DOE OSTI2020

Evaluating proxy influence in assimilated paleoclimate reconstructions – Testing the exchangeability of two ensembles of spatial processes

Climate field reconstructions (CFR) attempt to estimate spatiotemporal fields of climate variables in the past using climate proxies such as tree rings, ice cores, and corals. Data Assimilation (DA) methods are a recent and promising new means of deriving CFRs that optimally fuse climate proxies with climate model output. Despite the growing application of DA-based CFRs, little is understood about how much the assimilated proxies change the statistical properties of the climate model data. To address this question, we propose a robust and computationally efficient method, based on functional data depth, to evaluate differences in the distributions of two spatiotemporal processes. In this study, we apply our test to study global and regional proxy influence in DA-based CFRs by comparing the background and analysis states, which are treated as two samples of spatiotemporal fields. We find that the analysis states are significantly altered from the climate-model-based background states due to the assimilation of proxies. Moreover, the difference between the analysis and background states increases with the number of proxies, even in regions far beyond proxy collection sites. Our approach allows us to characterize the added value of proxies, indicating where and when the analysis states are distinct from the background states.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

Soil Origin and Plant Genotype Modulate Switchgrass Aboveground Productivity and Root Microbiome Assembly

Switchgrass (Panicum virgatum) is a model perennial grass for bioenergy production that can be productive in agricultural lands that are not suitable for food production. There is growing interest in whether its associated microbiome may be adaptive in low- or no-input cultivation systems. However, the relative impact of plant genotype and soil factors on plant microbiome and biomass are a challenge to decouple. To address this, a common garden greenhouse experiment was carried out using six common switchgrass genotypes, which were each grown in four different marginal soils collected from long-term bioenergy research sites in Michigan and Wisconsin. We characterized the fungal and bacterial root communities with high-throughput amplicon sequencing of the ITS and 16S rDNA markers, and collected phenological plant traits during plant growth, as well as soil chemical traits. At harvest, we measured the total plant aerial dry biomass. Significant differences in richness and Shannon diversity across soils but not between plant genotypes were found. Generalized linear models showed an interaction between soil and genotype for fungal richness but not for bacterial richness. Community structure was also strongly shaped by soil origin and soil origin × plant genotype interactions. Overall, plant genotype effects were significant but low. Random Forest models indicate that important factors impacting switchgrass biomass included NO 3 – , Ca 2+ , PO 4 3– , and microbial biodiversity. We identified 54 fungal and 52 bacterial predictors of plant aerial biomass, which included several operational taxonomic units belonging to Glomeraceae and Rhizobiaceae, fungal and bacterial lineages that are involved in provisioning nutrients to plants.

plant biomass↗
DOE OSTI2024

Utah FORGE 2-2439v2: Characterizing In-Situ Stress with Laboratory Modelling and Field Measurements - 2024 Annual Workshop Presentation

This is a presentation on A Multi-Component Approach to Characterizing In-Situ Stress at the Utah FORGE Site: Laboratory Modelling and Field Measurements project by The University of Pittsburgh, presented by Andrew Bunger. The project characterizes the stress in the Utah FORGE EGS reservoir using three methods: Method 1: Demonstrate complimentary laboratory rock-core stress estimation combined with Machine Learning approach for measuring in-situ stress from field sonic log data; Method 2: Complete field based in-situ measurement (mini-frac); and Method 3: Develop a mechanics-based method for connection near wellbore stress measurements to stresses away from the well-bore. This presentation was featured in the Utah FORGE R&D Annual Workshop on August 14, 2024.

15 GEOTHERMAL ENERGY↗
DOE OSTI2023

Soil architecture and subsurface stratigraphic heterogeneities across land-lake interfaces along Lake Erie.

Uploaded raw datasets from electrical resistivity tomography (ERT), ground penetrating radar (GPR), electromagnetic induction (EMI) and insitu sensors were acquired across land-lake interfaces along Lake Erie. These datasets were useful to delineate the soil architecture and subsurface stratigraphic heterogeneities. We combined multiple geophysical methods with lithostratigraphic logs from borehole cores and data from soil and borehole sensors to investigate spatial heterogeneities across land-lake interfaces. The apparent electrical conductivity (Eca) maps matched closely with the soil maps from public database and also detected additional soil units that were missing in the traditional soil maps. This implies that electromagnetic induction (EMI) could be relied upon for non invasive characterization of soils in sampling restricted sites where only non-invasive measurements are feasible. Results from electrical resistivity tomography (ERT) and Ground penetrating radar (GPR) are consistent with the surficial geology of the study area, and revealed that the vertical variabilities at the sites are mainly driven by stratigraphy.The ERT data (.stg) were acquired from three different sites portage river (PTR), crane creek (CRC) and old woman creek (OWC). The ".stg" files can be opened with ERT inversion software such as EarthImager, ResIpy or Res2DInv. The GPR data (.GPZ) were also acquired from the three sites, and the ".GPZ" data files can be opened with EKKO_project 5 software from Sensors & Software Inc., or with any other standard GPR software. The EM data (.csv) were acquired from the three sites while the soil sensor data (.csv) here were acquired only from crane creek site. The ".csv) files can be opened with MS Excel or any other spread sheet software.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

AmeriFlux FLUXNET-1F US-Hn2 Hanford 100H grassland

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-Hn2 Hanford 100H grassland. This is the FLUXNET version of the carbon flux data for the site US-Hn2 Hanford 100H grassland produced by applying the standard ONEFlux (1F) software. Site Description - The site is a riparian grassland ecosystem characterized by a shallow water table.

Liu, Heping↗
DOE OSTI2021

Business Environment Study (Subtask 5.1)

In 2016, WVR acquired the Wabash Integrated Gasification Combined Cycle (IGCC) Plant north of Terre Haute, Indiana. Initially, WVR intended to use the plant to produce ammonia using syngas converted to hydrogen. Part of the business plan was to capture and sequester the CO 2 byproduct with the goal of a net-zero carbon emitting plant. Now, with the demand for clean hydrogen-based power and fuel cell energy, the plant intends to produce power and sell hydrogen as a fuel source, still with the intent to sequester CO 2 and achieve net-zero emissions. The Wabash CarbonSAFE project’s objectives are to establish the feasibility of developing a commercial-scale geological storage complex at the WVR plant in Vigo County, Indiana, for storage of 50 million tonnes or more of CO 2 . The plant is expected to produce up to 2 million tons (1.82 million tonnes) of CO 2 annually as a byproduct of hydrogen production. Wabash CarbonSAFE has examined the feasibility of geologic storage of the CO 2 in the Potosi Dolomite Storage Complex of the Illinois Basin via an onsite characterization well at the WVR plant site. This document explores the business requirements to undertake such a project, outlining the outside influences on a business venture such as legislation, legal, regulatory, and business climate factors. This document then discusses the CO 2 source, potential partner sources, and the business financials that allow CCS to be commercially viable for Wabash Valley Resources.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗
DOE OSTI2022

Nuclear Emergency Support Team Public Health and Safety [Slides]

RAP is the nation’s premier first-response resource for advising Federal, state, local and tribal decision-makers on steps to take to evaluate and minimize the hazards of a radiological or nuclear incident. RAP support ranges from giving technical information or advice over the telephone to sending highly trained personnel with state-of-the-art equipment to the incident site where team members help identify, characterize and minimize any radiological or nuclear hazards.

98 NUCLEAR DISARMAMENT, SAFEGUARDS, AND PHYSICAL P↗
NASA NTRS1971

Experimental investigation on the origin of the genetic code.

A simple model of interacting complex systems of species is tested to assess the binding behavior of monomeric nucleic acid and protein components during evolution. Nine representative amino acids are immobilized by the formation of an amide linkage on a prepared chromatographic support. Selective binding of ribonucleoside 5-phosphates in these amino acids is achieved under standardized conditions, and a site-binding model is derived to characterize the binding. It is shown that the binding behavior of the reactants during nucleic acid-protein interactions depends on the nature of the base and the amino acid. The results of the study are assessed as useful for the interpretation of more complex nucleic acid-protein systems and of their role in the evolution of the cell.

Saxinger, C.↗