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At least 631 records · Page 35
All sourcesNASA NTRSDOE OSTI
DOE OSTI2024

Distinct and rich assemblages of giant viruses in Arctic and Antarctic lakes

Giant viruses (GVs) are key players in ecosystem functioning, biogeochemistry, and eukaryotic genome evolution. GV diversity and abundance in aquatic systems can exceed that of prokaryotes, but their diversity and ecology in lakes, especially polar ones, remain poorly understood. We conducted a comprehensive survey and meta-analysis of GV diversity across 20 lakes, spanning polar to temperate regions, combining our extensive lake metagenome database from the Canadian Arctic and subarctic with publicly available datasets. Leveraging a novel GV genome identification tool, we identified 3304 GV metagenome-assembled genomes, revealing lakes as untapped GV reservoirs. Phylogenomic analysis highlighted their dispersion across all Nucleocytoviricota orders. Strong GV population endemism emerged between lakes from similar regions and biomes (Antarctic and Arctic), but a polar/temperate barrier in lacustrine GV populations and differences in their gene content could be observed. Our study establishes a robust genomic reference for future investigations into lacustrine GV ecology in fast changing polar environments.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2020

Ecological Monitoring and Compliance Program 2019 Report

The Ecological Monitoring and Compliance Program (EMAC), funded through the U.S. Department of Energy, National Nuclear Security Administration Nevada Field Office (NNSA/NFO), monitors the ecosystem of the Nevada National Security Site (NNSS) and ensures compliance with laws and regulations pertaining to NNSS biota. This report summarizes the program’s activities conducted by Mission Support and Test Services, LLC (MSTS), during calendar year 2019. Program activities included (a) biological surveys at proposed activity sites, (b) desert tortoise compliance, (c) ecosystem monitoring, (d) sensitive and protected/regulated plant monitoring, (e) sensitive and protected/regulated animal monitoring, and (f) habitat restoration monitoring. During 2019, all applicable laws, regulations, and permit requirements were met, enabling EMAC to achieve its intended goals and objectives.

54 ENVIRONMENTAL SCIENCES↗
NASA NTRS1974

Ecological effects and environmental fate of solid rocket exhaust

Specific target processes were classified as to the chemical, chemical-physical, and biological reactions and toxic effects of solid rocket emissions within selected ecosystems at Kennedy Space Center. Exposure of Citris seedlings, English peas, and bush beans to SRM exhaust under laboratory conditions demonstrated reduced growth rates, but at very high concentrations. Field studies of natural plant populations in three diverse ecosystems failed to reveal any structural damage at the concentration levels tested. Background information on elemental composition of selected woody plants from two terrestrial ecosystems is reported. LD sub 50 for a native mouse (peromysous gossypinus) exposed to SRM exhaust was determined to be 50 ppm/g body weight. Results strongly indicate that other components of the SRM exhaust act synergically to enhance the toxic effects of HCl gas when inhaled. A brief summary is given regarding the work on SRM exhaust and its possible impact on hatchability of incubating bird eggs.

Nimmo, B.↗
NASA NTRS2021

Western Montana Ecological Forecasting: Modeling Habitat Suitability of Mustelid Species to Guide Detection Dog Surveys for Contaminants Monitoring, via Collected Scats in River Systems of Western Montana

Environmental contaminants are becoming increasingly prevalent in riverine ecosystems. The status of contaminants in western Montana’s relatively pristine river systems is largely unknown. Monitoring for heavy metals, brominated flame-retardants (BFRs), and pharmaceuticals is important due to their negative effects on ecosystems. Exposure to these contaminants can have significant endocrine, neurological, and reproductive effects. Contaminants easily travel up the food chain and bioaccumulate in apex predators. As predators with a largely aquatic diet, American mink (Mustela vison) and North American river otter (Lontra canadensis) serve as reliable indicator species of environmental health and the status of contaminants. Analysis of scat from these species is a noninvasive method to measure contaminant levels, and detection dogs from Working Dogs for Conservation (WD4C) have been used to locate these scat samples. To aid in the search of these samples, habitat suitability models were created for mink and otter for the years 2013-2020 and projected to 2040 using the random forest algorithm in the Software for Assisted Habitat Modeling (SAHM). Predictor variable data were acquired from Landsat 8 Operational Land Imager (OLI), Terra Moderate Resolution Imaging Spectroradiometer (MODIS), Global Precipitation Measurement Integrated Multi-satellite Retrievals for GPM (GPM IMERG), Shuttle Radar Topography Mission (SRTM), and Soil Moisture Active Passive (SMAP). Within these models, the most important variable for mink and otter habitat was distance to river. Suitable habitat also corresponded with emergent herbaceous land cover and deeper river locations. These habitat suitability models will inform sampling site section for further contaminant analysis.

Anna Winter↗
NASA NTRS2021

Delaware Ecological Forecasting: Assessing Land Cover and Soil to Identify Suitable Sites for Tidal Marsh Migration in Delaware

Tidal wetlands provide vital resources for the state of Delaware, crucial not only for maintaining important ecosystem functions, but also for providing human populations with substantial services. Healthy wetland networks offer protection from severe weather, reduce flooding, improve water quality, and provide opportunities for education and recreation. However, human activities in combination with natural events, continue to cause substantial loss of wetland cover and damage wetland health. Over the last thirty years, the state of Delaware has experienced a net loss of roughly 5,000 acres of wetland. In collaboration with the Delaware Department of Natural Resources and Environmental Control (DNREC), the team used NASA Earth observations including Landsat 5 Thematic Mapper (TM), Landsat 8 Operational Land Imager (OLI), Terra Moderate Resolution Imaging Spectroradiometer (MODIS), and Global Precipitation Measurement Integrated Multi-Satellite Retrievals (GPM IMERG) to develop a methodology to monitor recent changes in wetland cover and forecast landward marsh migration due to sea-level rise, changes to climate, and human development. Trend analysis of current and past climate conditions in precipitation and temperature revealed an overall increase in both metrics. Using Land Change Modeler in TerrSet and Suitability Modeler in ArcGIS Pro, the team visualized landcover shifts over the last 20 years, indicating a general pattern of net wetland loss and identified locations where marsh migration could potentially occur in the future. These observations will enable better planning for restoration activities and in form decision-making to preserve wetland health and ecosystem functions.

McKenna Brahler↗
NASA NTRSDate not supplied

Coronado Ecological Conservation: Assessing Vegetation Change Due to Border Wall Construction and Shifting Social Trails

Species monitoring is essential in mitigating the impacts of plant invasion, such as radical changes in an area’s ecosystem, degraded soil health, increased wildfire severity, landslides, and increased flooding. NASA DEVELOP partnered with the National Park Service (NPS) to investigate invasive species in disturbed lands: specifically, areas affected by off-trail walking and US-Mexico border construction activities. The team assessed how construction has impacted the distribution of Lehmann’s lovegrass and Russian thistle invasives throughout Coronado National Memorial, AZ from 1986 to 2022. Using data from Landsat 5 and 8, Sentinel-2, the National Agriculture Imagery Program, and PlanetScope, the team computed vegetation indices including the Normalized Difference Vegetation Index, Normalized Difference Moisture Index, Modified Soil Adjusted Vegetation Index 2, Enhanced Vegetation Index, and Tasseled Cap Wetness, Brightness, and Greenness transformations as vegetation health indicators to input into various machine learning algorithms. To minimize noise, the team conducted Principal Component Analysis on the vegetation indices and spectral bands before running k-means++ clustering and random forest classification algorithms. Between all datasets, we found the median area fully overtaken by invasive plants was 5.37% of the park’s total area in 2022. The NPS will use the end products to help increase restoration efforts in disturbed areas with high concentrations of invasive plants. The NPS’s collection of ground data for 2022–2023, in conjunction with future data collection, will notably improve the accuracy of classification models, leading to more precise monitoring of invasive spread over time.

Carson Schuetze↗
NASA NTRS2023

Coronado Ecological Conservation: Assessing Vegetation Change Due to Border Wall Construction and Shifting Social Trails

Species monitoring is essential for mitigating the impacts of plant invasion, such as radical changes in an area’s ecosystem, degraded soil health, increased wildfire severity, landslides, and increased flooding. For this project, NASA DEVELOP partnered with the National Park Service (NPS) to investigate invasive species in disturbed lands: specifically, areas affected by off-trail travel and U.S.-Mexico border construction activities. The team assessed how construction has impacted the distribution of Lehmann’s lovegrass and Russian thistle invasives throughout Coronado National Memorial, AZ from 1986-2022. Using data from Landsat 5 and 8, Sentinel-2, NAIP, and PlanetScope, the team computed NDVI, NDMI, MSAVI2, EVI, and Tasseled Cap Wetness, Brightness, and Greenness transformations as vegetation health indicators to input into various machine learning algorithms. To minimize noise, the team conducted Principal Component Analysis on vegetation indices and spectral bands before running k-means clustering and random forest classification algorithms. Between all datasets, the team found that the median area fully overtaken by invasive plants was 5.37% of the park’s total area in 2022. The NPS will use end products to help increase restoration efforts in disturbed areas with high concentrations of invasive plants, and this project can serve as a jumping off point for future invasive species monitoring. The NPS’s collection of ground data for 2022-2023, in conjunction with future data collection, will notably improve the accuracy of classification models, leading to more precise monitoring of invasive species spread over time.

Coronado National Memorial↗
NASA NTRS2022

Northeast US Ecological Forecasting: Modeling Invasive Plant Habitat Suitability to Support Management Efforts in the American Northeast

Invasive plant species threaten environmental and economic interests when they spread into new areas, outcompete native species, and disrupt ecosystem services. If the spread is not controlled early, species can become well-established and increasingly difficult to manage. The National Park Service (NPS) Invasive Plant Management Teams (IPMTs) strive for an “early detection, rapid response” approach to reducing invasive species spread. Management teams can better prioritize their work with the help of species distribution models (SDMs), which map habitat suitability by combining species occurrences with environmental predictor variables. Scarce invaded range data for newly arrived invasive species presents a particular challenge for producing accurate models. To improve future modeling efforts, this project compared SDM methods using different spatial scales to model two plant species invasive to the Northeast US: the well-established Japanese stiltgrass (Microstegium vimineum) and newer invasive species wavyleaf basketgrass (Oplismenus undulatifolius). The team used NASA Earth observations and climate datasets to model occurrence data and predictor layers at a US-specific extent (90m2 spatial resolution) and global extent (1 km2 spatial resolution). Landsat 5 Thematic Mapper (TM), Landsat 7 Enhanced Thematic Mapper Plus (ETM+), and Landsat 8 Operational Land Imager (OLI) provided data for US Normalized Difference Moisture Indices (NDMI), while global NDMI and topographic predictor layers were derived from Shuttle Radar Topography Mission (SRTM) and Terra Moderate Resolution Imaging Spectroradiometer (MODIS). The resulting models indicated important predictor variables for each species and explored the benefits and tradeoffs of using global data to model habitat suitability for new-arrival invasive species.

Rebecca Ohman↗
NASA NTRSDate not supplied

Grand Valley Ecological Forecasting II: Forecasting Trends in Pinyon-Juniper and Sagebrush Habitat Relative to Wildfire, Drought, Beetle Disturbance, and Treatment Impact for Management Planning

Disturbances and landcover change in pinyon-juniper and sagebrush ecosystems are exacerbated by environmental conditions such as variability in climate characteristics. Our DEVELOP team partnered with the National Park Service (NPS) in Colorado National Monument and the Bureau of Land Management (BLM) in McInnis Canyons and Dominguez-Escalante National Conservation Areas to investigate disturbances to land cover. NPS partners were interested in identifying areas at risk of pinyon-juniper die-off or encroachment by invasive species. The BLM partners prioritized identifying areas suitable for fire reduction and prevention treatment. To address these concerns, we forecasted landcover change in the Grand Valley region of Colorado using NASA Earth observation data from Landsat 5 Thematic Mapper (TM), Landsat 7 Enhanced Thematic Mapper (ETM+), Landsat 8 Operational Land Imager (OLI), and Moderate Resolution Imaging Spectroradiometer (MODIS) aboard Terra and Aqua. We collected and analyzed these data in conjunction with Term I of this project. We found that the primary drivers of forecasted landcover change in the study area were aspect and elevation. Our forecasted land cover maps, created using the Idrisi TerrSet Land Change Modeler, indicated that by 2040, ecosystems within partner management areas will likely see tree encroachment on shrublands. These maps addressed the needs of our partners by showing potential habitat suitability trends, which will inform management planning.

Bill Curtiss↗
NASA NTRS2022

Grand Valley Ecological Forecasting II: Forecasting Trends in Pinyon-Juniper and Sagebrush Habitat Relative to Wildfire, Drought, Beetle Disturbance, and Treatment Impact for Management Planning

Disturbances and landcover change in pinyon-juniper and sagebrush ecosystems are exacerbated by environmental conditions such as variability in climate characteristics. Our DEVELOP team partnered with the National Park Service (NPS) in Colorado National Monument and the Bureau of Land Management (BLM)in McInnis Canyons and Dominguez-Escalante National Conservation Areas to investigate disturbances to land cover. NPS partners were interested in identifying areas at risk of pinyon-juniper die-off or encroachment by invasive species. The BLM partners prioritized identifying areas suitable for fire reduction/prevention treatment. To address these concerns, we forecasted landcover change in the Grand Valley region of Colorado using NASA Earth observation data from Landsat 5 Thematic Mapper (TM), Landsat 7 Enhanced Thematic Mapper (ETM+), Landsat 8 Operational Land Imager (OLI), and Moderate Resolution Imaging Spectroradiometer (MODIS) aboard Terra and Aqua. We collected and analyzed these data in conjunction with Term I of this project. We found that the primary drivers of forecasted landcover change in the study area were aspect and elevation. Our forecasted landcover change maps, created using the Idrisi TerrSet Land Change Modeler, addressed the needs of our partners by showing potential habitat suitability trends, which will inform management planning. Forecasted landcover maps indicated that by 2040, ecosystems within partner management areas will likely see tree encroachment on shrublands.

William Curtiss↗
DOE OSTI2021

Filling gaps in our understanding of belowground plant traits across the world: an introduction to a Virtual Issue

The belowground world is one of the final frontiers in terrestrial ecology. The tangling of plant roots with the surrounding soil below is a lifeline for the humble forbs and towering trees above, and roots play a key role in shaping ecosystem carbon, water and nutrient cycling (Bardgett et al., 2014). Ecologists have long sought to better understand the ecosystem-scale consequences of differing plant strategies, above- and belowground, by relating plant characteristics, or traits, to plant function (Grime, 1977; Pregitzer, 2002). While developing trait–function linkages is arguably more difficult for plant traits that are hidden belowground, root and rhizosphere ecologists continue to fan out across grasslands and forests with their shovels, isotopes, and specialized cameras, seeking a better understanding of the secret lives of roots. Over the years, New Phytologist has served as a virtual town square for scientists to discuss their hard-won observations on the interplay among belowground plant traits, microbial activity, and edaphic and environmental conditions from biomes around the world (Norby & Jackson, 2000; Pregitzer, 2002; Matamala & Stover, 2013; Norby & Iversen, 2017). In this Editorial we highlight the newest papers that update and add to our understanding of the role of root and rhizosphere traits in broader ecosystem processes. We focused on papers published in New Phytologist between 1 January 2019 and 31 December 2020 and extended this window to papers still in ‘early view’ up to the time of writing. Because of the overwhelming number of papers, we did not include those with a decidedly genomic focus or that served primarily as data syntheses, reviews, insights or commentaries.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2025

Warming Permafrost Model Intercomparision Project (WrPMIP): Pan-Arctic Perturbation Warming Simulations

Title: Warming Permafrost Model Intercomparision Project (WrPMIP): Pan-Arctic Perturbation Warming Simulations Description: WrPMIP Pan-Arctic simulations including historial baseline and two warming simulations. Models were perturbed similarly to known experimental warming trials that have been implemented across the Pan-Arctic over the last several decades. More information about the dataset can be found at the following links: https://warmingpermafrost.nau.edu/ The dataset is available at: https://esgf-node.ornl.gov/search/project=WrPMIP&mip_era=CMIP6&activity_id=WrPMIP

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2024

Characterizing suburban soil and microbial properties along a soil age chronosequence

Abstract Rapid urbanization is drastically altering ecosystem processes in landscapes around the world. In particular, suburban residential neighborhoods comprise novel ecosystems with water and nutrient inputs that differ greatly from the surrounding land area. These impacts generate concern over the sustainability of urban ecosystems, especially whether they will be characterized by net carbon gain or loss over time. To address this knowledge gap, we established a chronosequence of residential yards in Southern California to test how urban soils change after development. We predicted that urbanized soils would experience shifts in physical characteristics and microbial function over time consistent with ecological succession theory, but residential soils would maintain novel moisture and nutrient regimes compared to undeveloped soils, never “recovering” to a pre‐developed state. We compared different vegetation types to quantify impacts of homeowner landscaping choices and characterized yard soils and their microbial communities. We found that yard soils were nutrient‐ and moisture‐enriched compared to an adjacent undeveloped ecosystem, and turfgrass was associated with higher levels of water and nitrogen. Despite high respiration rates, yard soils accumulated carbon and nitrogen over time. We conclude that suburban residential soils comprise dynamic and heterogeneous ecosystems that are highly influenced by landscaping choices and management practices, and warrant closer study at small management‐relevant scales.

Suratt, Andie [Department of Ecology and Evolution↗
DOE OSTI2023

Cellulose Nanocrystals’ Role in Critical Mineral Beneficiation: Dual Aggregate-Dispersant Behavior Supports Environmentally Benign Nickel Processing

Environmentally unsustainable and toxic chemical flocculants and dispersants from nickel (Ni) processing contribute to industrial effluents that greatly impact biodiversity and aquatic life. Despite the industry’s efforts to reduce its ecological footprint—primarily due to the lack of commercially available biodegradable, environmentally benign, and non-toxic reagents—these reagents continue to harm natural ecosystems. Chemicals used during the processing operations often target a specific unit operation that negatively affects downstream operations. In this study, we discover the concentration-dependent behavior of cellulose nanocrystals (CNCs) as a dispersant and flocculant, avoiding the use of various harmful chemicals in the nickel processing stages. Electrophoretic, optical brightfield microscopy, and quartz crystal microbalance-dissipation studies detected charge neutralization behavior by renewable and biodegradable CNCs, which can greatly benefit Ni processing operations. Microflotation experiments demonstrated that CNCs enhanced Ni recovery from 62 to 77 wt.% and concentrate grade from 15 to 20 wt.%. Settling and turbidity studies demonstrated the dual flocculant-dispersant behavior of CNCs resulting from the alignment of CNC fibers along the octahedral brucite basal and amphoteric edge plane of serpentine. CNCs can be used as dispersants during froth flotation to improve Ni beneficiation and as post-processing flocculants for tailings management and dewatering, which is one of the major environmental and social concerns facing the mining and mineral processing industry. This study paves the way for CNCs to be used as flocculants and dispersants in a range of industries from healthcare to pharmaceuticals to semiconductor devices.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2022

Multiple sources of aerobic methane production in aquatic ecosystems include bacterial photosynthesis

Aquatic ecosystems are globally significant sources of the greenhouse gas methane to the atmosphere. Until recently, methane production was thought to be a strictly anaerobic process confined primarily to anoxic sediments. However, supersaturation of methane in oxygenated waters has been consistently observed in lakes and the ocean (termed the ‘methane paradox’), indicating that methane can be produced under oxic conditions through unclear mechanisms. Here we show aerobic methane production from multiple sources in freshwater incubation experiments under different treatments and based on biogeochemical, metagenomic, and metatranscriptomic data. We find that aerobic methane production appears to be associated with (bacterio)chlorophyll metabolism and photosynthesis, as well as with Proteobacterial degradation of methylphosphonate. Genes encoding pathways for putative photosynthetic- and methylphosphonate-based methane production also co-occur in Proteobacterial metagenome-assembled genomes. Our findings provide insight into known mechanisms of aerobic methane production, and suggest a potential co-occurring mechanism associated with bacterial photosynthesis in aquatic ecosystems.

59 BASIC BIOLOGICAL SCIENCES↗
NASA NTRS1996

Curriculum Development in Remote Sensing at California State University, Monterery, Seaside, California 93955

The NASA-Ames Research Center and the California State University, Monterey Bay, California (CSUMB), have signed a Memorandum of Understanding (MOU) to develop and provide cooperative programs between the Ecosystem Science and Technology Branch of NASA (ECOSAT) and the University (CSUMB). The agreement is to carry out educational, research, and technology goals in ecological and environmental sciences and related disciplines, with particular emphasis on changing environmental and climatic conditions occurring worldwide due to the anthropogenic causes affecting the balance within ecological systems and the health and well-being of humans. The preparation of the Curriculum for Remote Sensing at CSUMB was undertaken at the request of the Center as a result of the above agreement.

Sinha, Ravi↗
NASA NTRS2021

DroughtCast: A Machine Learning Forecast of the United States Drought Monitor

Drought is one of the most ecologically and economically devastating natural phenomena affecting the United States, causing the U.S. economy billions of dollars in damage, and driving widespread degradation of ecosystem health. Many drought indices are implemented to monitor the current extent and status of drought so stakeholders such as farmers and local governments can appropriately respond. Methods toforecast drought conditions weeks to months in advance are less common but would provide a more effective early warning system to enhance drought response, mitigation, and adaptation planning. To resolve this issue, we introduce DroughtCast, a machine learning framework for forecasting the United States Drought Monitor (USDM). DroughtCast operates on the knowledge that recent anomalies in hydrology and meteorology drive future changes in drought conditions. We use simulated meteorology and satellite observed soil moisture as inputs into a recurrent neural network to accurately forecast the USDM between 1 and 12 weeks into the future. Our analysis shows that precipitation, soil moisture, and temperature are the most important input variables when forecasting future drought conditions. Additionally, a case study of the 2017 Northern Plains Flash Drought shows that DroughtCast was able to forecast a very extreme drought event up to 12 weeks before its onset. Given the favorable forecasting skill of the model, DroughtCast may provide a promising tool for land managers and local governments in preparing for and mitigating the effects of drought.

Machine Learning↗
DOE OSTI2024

Landscape fragmentation overturns classical metapopulation thinking

Habitat loss and isolation caused by landscape fragmentation represent a growing threat to global biodiversity. Existing theory suggests that the process will lead to a decline in metapopulation viability. However, since most metapopulation models are restricted to simple networks of discrete habitat patches, the effects of real landscape fragmentation, particularly in stochastic environments, are not well understood. To close this major gap in ecological theory, we developed a spatially explicit, individual-based model applicable to realistic landscape structures, bridging metapopulation ecology and landscape ecology. This model reproduced classical metapopulation dynamics under conventional model assumptions, but on fragmented landscapes, it uncovered general dynamics that are in stark contradiction to the prevailing views in the ecological and conservation literature. Notably, fragmentation can give rise to a series of dualities: a) positive and negative responses to environmental noise, b) relative slowdown and acceleration in density decline, and c) synchronization and desynchronization of local population dynamics. Furthermore, counter to common intuition, species that interact locally (“residents”) were often more resilient to fragmentation than long-ranging “migrants.” This set of findings signals a need to fundamentally reconsider our approach to ecosystem management in a noisy and fragmented world.

54 ENVIRONMENTAL SCIENCES↗