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At least 613 records · Page 34

The application of geologic remote sensing to vertebrate biostratigraphy - General results from the Wind River Basin, Wyoming

Since 1986, remote sensing images derived from satellite and aircraft-borne sensor data have been used to study the stratigraphy and sedimentology of the vertebrate-bearing Wind River and Wagon Bed formations in the Wind River Basin (Wyoming). Landsat 5 TM and aircraft Thermal Infrared Multispectral Scanner data were combined with conventional geologic analyses. The remote sensing data have contributed significantly to: (1) geologic mapping at the formation, member, and bed levels; (2) stratigraphic correlation; (3) reconstruction of ancient depositional environments; and (4) identification of structural complexity. This information is critical to vertebrate paleontology in providing the stratigraphic, sedimentologic, and structural framework required for evolutionary and paleoecologic studies. Of primary importance is the ability to map at minimal cost the geology of large areas (20,000 sq km or greater) at a high level of precision. Remote sensing data can be especially useful in geologically and paleontologically unexplored or poorly understood regions.

Stucky, Richard K.↗

Interrelationship of Nondestructive Evaluation Methodologies Applied to Testing of Composite Overwrapped Pressure Vessels

Composite Overwrapped Pressure Vessels (COPVs) are commonly used in spacecraft for containment of pressurized gases and fluids, incorporating strength and weight savings. The energy stored is capable of extensive spacecraft damage and personal injury in the event of sudden failure. These apparently simple structures, composed of a metallic media impermeable liner and fiber/resin composite overwrap are really complex structures with numerous material and structural phenomena interacting during pressurized use which requires multiple, interrelated monitoring methodologies to monitor and understand subtle changes critical to safe use. Testing of COPVs at NASA Johnson Space Center White Sands T est Facility (WSTF) has employed multiple in-situ, real-time nondestructive evaluation (NDE) methodologies as well as pre- and post-test comparative techniques to monitor changes in material and structural parameters during advanced pressurized testing. The use of NDE methodologies and their relationship to monitoring changes is discussed based on testing of real-world spacecraft COPVs. Lessons learned are used to present recommendations for use in testing, as well as a discussion of potential applications to vessel health monitoring in future applications.

Leifeste, Mark R.↗

APR1400 In-Core Instrumentation Penetration Failure by Zirconia Melt

Light water reactors have many penetrations at the reactor vessel lower head which are called ICI (in-core instrumentation tubes), ICM-GT (in-core monitoring guide tubes), CRGT (control rod guide tubes) and drain tubes. For Korean PWRs (pressurized water reactors), there are dozens of bottom-up type ICI penetration tubes (45 for OPR1000 and 61 for APR1400). For the typical BWRs (boiling water reactors), hundreds of penetrations are positioned at the reactor vessel lower head due to the structural complexity at the reactor upper head. These penetrations are regarded as the most vulnerable structures during a severe accident as they could be failed by high temperature of melt (or debris) and its decay heat. That is, tube rupture and/or tube ejection could occur because there exist an empty hole inside the penetration tube which can be a melt flow path, and they are attached to the inside of the reactor vessel by a partial weld with a gap between the tubes and reactor vessel. Therefore, the research on the penetration failure is of importance, as it could lead to melt discharge into the containment and subsequent release of radioactive materials to the environment due to the containment failure. This paper focuses on the experimental investigation on the tube ejection failure for the APR1400 ICI penetration. The tube ejection experiments were performed as it was exposed to high temperature of zirconia melt and high pressure. The tube ejection failure experiments were performed for the APR1400 in-core instrumentation penetration nozzle. Zirconia melt was used as a simulant of molten corium and interacted with the penetration specimen. The specimen was pressurized up to 2.6 bar during the interaction with melt to induce the tube ejection. The penetration weld was heated up to its melting temperature, and the penetration tube and weld above the reactor vessel surface were eroded severely by the melt. However, even though it was estimated that the weld failure occurred and the reactor vessel with stainless steel cladding was ablated severely by the melt, the tube ejection did not take place, and consequently the integrity for the APR1400 ICI penetration was confirmed in the present experimental conditions. The goal of this research is to improve the penetrations failure models in MAAP5 codes based on the experimental data. To achieve this goal, it is necessary to increase the heat flux and pressure acting on the penetration tube to find the conditions for the tube ejection failure. Moreover, the penetration failure experiments will be performed by delivering melt into the penetration specimen to simulate the melt relocation process in a real severe accident situation. (authors)

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

A comparison of viscoelastic damping models

Modern finite element methods (FEM's) enable the precise modeling of mass and stiffness properties in what were in the past overwhelmingly large and complex structures. These models allow the accurate determination of natural frequencies and mode shapes. However, adequate methods for modeling highly damped and high frequency dependent structures did not exist until recently. The most commonly used method, Modal Strain Energy, does not correctly predict complex mode shapes since it is based on the assumption that the mode shapes of a structure are real. Recently, many techniques have been developed which allow the modeling of frequency dependent damping properties of materials in a finite element compatible form. Two of these methods, the Golla-Hughes-McTavish method and the Lesieutre-Mingori method, model the frequency dependent effects by adding coordinates to the existing system thus maintaining the linearity of the model. The third model, proposed by Bagley and Torvik, is based on the Fractional Calculus method and requires fewer empirical parameters to model the frequency dependence at the expense of linearity of the governing equations. This work examines the Modal Strain Energy, Golla-Hughes-McTavish and Bagley and Torvik models and compares them to determine the plausibility of using them for modeling viscoelastic damping in large structures.

Slater, Joseph C.↗

Lone-Electron-Pair Micelles Strengthen Bond Anharmonicity in MnPb16Sb14S38 Complex Sulfosalt Leading to Ultra-Low Thermal Conductivity

Designing crystalline solids in which intrinsic extremely low lattice thermal conductivity mainly arises from its unique bonding nature rather than structure complexity and/or atomic disorder could promote thermal energy manipulation and utilization for applications ranging from thermoelectric energy conversion to thermal barrier coatings. Here, we report an extremely low lattice thermal conductivity of ~0.34 W m-1 K-1 at 300 K in the new complex sulfosalt MnPb16Sb14S38. We attribute the ultra-low lattice thermal conductivity to a synergistic combination of scattering mechanisms involving (1) strong bond anharmonicity in various structural building units, owing to the presence of stereoactive lone-electron-pair (LEP) micelles, and (2) phonon scattering at the interfaces between building units of increasing size and complexity. Remarkably, low-temperature heat capacity measurement revealed a Cp value of 0.206 J g-1 K-1 at T > 300 K, which is 22% lower than the Dulong-Petit value (0.274 J g-1 K-1). Further analysis of the Cp data and sound velocity (ν = 1834 m/s) measurement yielded Debye temperature values of 161 K and 187 K, respectively. Here, the resulting Grüneisen parameter, γ = 1.65, further supports strong bond anharmonicity as the dominant mechanism responsible for the observed extremely low lattice thermal conductivity.

36 MATERIALS SCIENCE↗

Nonlinear structural analysis on distributed-memory computers

A computational strategy is presented for the nonlinear static and postbuckling analyses of large complex structures on massively parallel computers. The strategy is designed for distributed-memory, message-passing parallel computer systems. The key elements of the proposed strategy are: (1) a multiple-parameter reduced basis technique; (2) a nested dissection (or multilevel substructuring) ordering scheme; (3) parallel assembly of global matrices; and (4) a parallel sparse equation solver. The effectiveness of the strategy is assessed by applying it to thermo-mechanical postbuckling analyses of stiffened composite panels with cutouts, and nonlinear large-deflection analyses of HSCT models on Intel Paragon XP/S computers. The numerical studies presented demonstrate the advantages of nested dissection-based solvers over traditional skyline-based solvers on distributed memory machines.

Watson, Brian C.↗

Hierarchical, rotation‐equivariant neural networks to select structural models of protein complexes

Abstract Predicting the structure of multi‐protein complexes is a grand challenge in biochemistry, with major implications for basic science and drug discovery. Computational structure prediction methods generally leverage predefined structural features to distinguish accurate structural models from less accurate ones. This raises the question of whether it is possible to learn characteristics of accurate models directly from atomic coordinates of protein complexes, with no prior assumptions. Here we introduce a machine learning method that learns directly from the 3D positions of all atoms to identify accurate models of protein complexes, without using any precomputed physics‐inspired or statistical terms. Our neural network architecture combines multiple ingredients that together enable end‐to‐end learning from molecular structures containing tens of thousands of atoms: a point‐based representation of atoms, equivariance with respect to rotation and translation, local convolutions, and hierarchical subsampling operations. When used in combination with previously developed scoring functions, our network substantially improves the identification of accurate structural models among a large set of possible models. Our network can also be used to predict the accuracy of a given structural model in absolute terms. The architecture we present is readily applicable to other tasks involving learning on 3D structures of large atomic systems.

Eismann, Stephan↗

Electronic structure and thermoelectric properties of pnictogen-substituted ASn{sub 1.5}Te{sub 1.5} (A = Co, Rh, Ir) skutterudites

Substituting group 14 and 16 elements on the pnictogen site in the skutterudite structure yields a class of valence-precise ternary AX{sub 1.5}Y{sub 1.5} compounds (A = Co, Rh, Ir, X = Sn, Ge, and Y = S, Se, Te), in which X and Y form an ordered sub-structure. Compared with unfilled binary skutterudites, pnictogen-substituted phases exhibit extremely low lattice thermal conductivity due to increased structural complexity. Here, we investigate the role of the transition metal species in determining the electronic structure and transport properties of ASn{sub 1.5}Te{sub 1.5} compounds with A = Co, Rh, Ir. Density functional calculations using fully ordered structures reveal semiconducting behavior in all three compounds, with the band gap varying from 0.2 to 0.45 eV. In CoSn{sub 1.5}Te{sub 1.5}, the electronic density of states near the gap is significantly higher than for A = Ir or Rh, leading to higher effective masses and higher Seebeck coefficients. Experimentally, Ir and Rh samples exhibit relatively large p-type carrier concentrations and degenerate semiconducting behavior. In contrast, CoSn{sub 1.5}Te{sub 1.5} shows mixed conduction, with n-type carriers dominating the Seebeck coefficient and light, high mobility holes dominating the Hall coefficient. zT values of up to 0.35 were obtained, and further improvement is expected upon optimization of the carrier concentration or with n-type doping.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

How substrate specificity is imposed on a histone demethylase—lessons from KDM2A

Histone lysine methylation and demethylation regulate histone methylation dynamics, which impacts chromatin structure and function. To read and erase the methylated histone residues, lysine demethylases must specifically recognize the histone sequences and methylated sites and discriminate the degree of these methylations. In this issue of Genes & Development, Cheng and colleagues (pp. 1758–1771) determine a crystal structure of histone lysine demethylase KDM2A that specifically targets lower degrees of H3K36 methylation. The results reveal the structural basis for H3K36 substrate specificity and suggest mechanisms of Lys36 demethylation. This KDM2A– H3K36 complex structure, coupled with functional studies, provides needed insight into the process and regulation of histone demethylation.

59 BASIC BIOLOGICAL SCIENCES↗

NASA research on viscous drag reduction

Research on natural laminar flow, laminar flow control by suction, and turbulent drag reduction is discussed. Preliminary results suggest that a significant amount of natural laminar flow can be achieved on small, straight wing airplanes. On larger, swept wing aircraft, laminar flow control by distributed suction is expected to result in significant fuel savings. The area over which laminar flow control is applied depends on tradeoffs involving structural complexity, maintenance, and cost. Several methods of reducing turbulent skin friction by altering the turbulence structure itself have shown promise in exploratory testing. The status of these technologies and the benefits of applying them to future aircraft are reviewed.

Petersen, R. H.↗

NASA research on viscous drag reduction

Current NASA research points toward exciting opportunities for large reductions in viscous drag. Research is underway on natural laminar flow, laminar flow control by suction, and turbulent drag reduction. Preliminary results suggest that a significant amount of natural laminar flow can be achieved on small, straight-wing airplanes. On larger, swept-wing aircraft, laminar flow control by distributed suction is expected to result in significant fuel savings. The area over which laminar flow control is applied depends on tradeoffs involving structural complexity, maintenance, and cost. Several methods of reducing turbulent skin friction by altering the turbulence structure itself have shown promise in exploratory testing. This paper reviews the status of these technologies and indicates the benefits of applying them to future aircraft.

Petersen, R. H.↗

Imparting Barely Visible Impact Damage to a Stitched Composite Large-Scale Pressure Box

The Pultruded Rod Stitched Efficient Unitized Structure (PRSEUS) is a concept that was developed by The Boeing Company to address the complex structural design aspects associated with a pressurized hybrid wing body (HWB) aircraft configuration, which has been a focus of the NASA Environmentally Responsible Aviation Project. The NASA-Boeing structural development for the HWB aircraft culminated in testing of the multi-bay box, which is an 80%-scale representation of the pressurized center-body section. This structure was tested in the NASA Langley Research Center Combined Loads Test System facility. As part of this testing, barely visible impact damage was imparted to the interior and exterior of the test article to demonstrate compliance with a condition representative of the requirements for Category 1 damaged composite structure as defined by the Federal Aviation Regulations. Interior impacts were imparted using an existing spring-loaded impactor, while the exterior impacts were imparted using a newly designed, gravity-driven impactor. This paper describes the impacts to the test article, and the design of the gravitydriven guided-weight impactor. The guided-weight impactor proved to be a very reliable method to impart barely visible impact damage in locations which are not easily accessible for a traditional drop-weight impactor, while at the same time having the capability to be highly configurable for use on other aircraft structures.

Lovejoy, Andrew E.↗

Response of Pseudomonas putida to Complex, Aromatic-Rich Fractions from Biomass

There is strong interest in the valorization of lignin to produce valuable products; however, its structural complexity has been a conversion bottleneck. Chemical pretreatment liberates lignin-derived soluble fractions that may be upgraded by bioconversion. Here, cholinium ionic liquid pretreatment of sorghum produced soluble, aromatic-rich fractions that were converted by Pseudomonas putida (P. putida), a promising host for aromatic bioconversion. Growth studies and mutational analysis demonstrated that P. putida growth on these fractions was dependent on aromatic monomers but unknown factors also contributed. Proteomic and metabolomic analyses indicated that these unknown factors were amino acids and residual ionic liquid; the oligomeric aromatic fraction derived from lignin was not converted. A cholinium catabolic pathway was identified, and the deletion of the pathway stopped the ability of P. putida to grow on cholinium ionic liquid. This work demonstrates that aromatic-rich fractions obtained through pretreatment contain multiple substrates; conversion strategies should account for this complexity.

09 BIOMASS FUELS↗

High power microwave source with a three dimensional printed metamaterial slow-wave structure

For over the last decade, the concept of metamaterials has led to new approaches for considering the interaction of radiation with complex structures. However, practical manifestations of such a device operating at high power densities have proven difficult to achieve due to the resonant nature of metamaterials and the resultant high electric fields, which place severe constraints on manufacturing the slow wave structures. In this paper, we describe the first experimental manifestation of a high power microwave device utilizing a metallic slow wave structure (metamaterial-like) fabricated using additive manufacturing. The feasibility of utilizing additive manufacturing as a technique for building these relatively complicated structures has thus been demonstrated. The MW class microwave source operates in the C-band and shows frequency tunablility with electron beam voltage. The basic electromagnetic characteristics of this device, the construction using additive manufacturing, and the basic performance as a microwave oscillator are considered. Due to the tunable nature of the device, it shows promise not only as an oscillator but also as a microwave amplifier. Therefore, the dispersive characteristics and a discussion of the anticipated gain is included as it relates to an amplifier configuration.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Structural Analyses and Margins of Safety

There is an increasing reliance on modeling and simulation to verify, quantify, and certify designs of complex structures. The availability of a range of commercial modeling and simulations tools and packages with a variety of capabilities, in conjunction with increased computational resources, is allowing analysts to rapidly perform detailed analyses. However, care should be taken to understand specific tool limitations, assumptions, and boundary conditions as erroneous results can be generated without being recognized by the analysts. In addition, the reported margins of safety should be carefully interrogated to identify any false positive or negative margins and highlight any areas for structural concern.

Structural Analyses↗

Asymmetric loading of TnsE regulates Tn7 targeting of DNA replication structures

Abstract Tn7 transposable elements are known for their sophisticated target-site selection mechanisms. For the prototypical Tn7 element, dedicated transposon-encoded proteins direct insertions to either a conserved site in the chromosome or replicating DNA structures in conjugal plasmids, ensuring the vertical and horizontal spread of the element. While the pathway targeting the attTn7 site in the bacterial chromosome has been extensively studied, the pathway targeting DNA replication structures remains poorly understood. We have used an integrative structural biology approach to elucidate how the Tn7-encoded protein TnsE recognizes replication sites. Using native mass spectrometry, we found that TnsE forms 1:1 and 2:1 (TnsE:DNA) complexes on 3′-recessed DNA, with gain-of-function TnsE variants favoring the formation of 2:1 complexes. Structural characterization confirms that two TnsE molecules bind to DNA with the C-terminal domain of the protein recognizing duplex DNA, leaving the N-terminal domain to impose DNA substrate specificity and recruit the core transposition machinery. Collectively, our work is consistent with a model where TnsE-mediated target-site selection relies on the formation of an asymmetric TnsE:DNA complex to recruit the Tn7 transposase to DNA replication structures.

Biochemistry & Molecular Biology↗

Complex pectin metabolism by gut bacteria reveals novel catalytic functions

The metabolism of carbohydrate polymers drives microbial diversity in the human gut microbiota. It is unclear, however, whether bacterial consortia or single organisms are required to depolymerize highly complex glycans. Here in this paper we show that the gut bacterium Bacteroides thetaiotaomicron uses the most structurally complex glycan known: the plant pectic polysaccharide rhamnogalacturonan-II, cleaving all but 1 of its 21 distinct glycosidic linkages. The deconstruction of rhamnogalacturonan-II side chains and backbone are coordinated to overcome steric constraints, and the degradation involves previously undiscovered enzyme families and catalytic activities. The degradation system informs revision of the current structural model of rhamnogalacturonan-II and highlights how individual gut bacteria orchestrate manifold enzymes to metabolize the most challenging glycan in the human diet.

59 BASIC BIOLOGICAL SCIENCES↗

Synchrotron x-Ray Study of Heterostructured Materials: A Review

Heterostructured materials (HSMs) have shown great potential for breaking the strength-ductility tradeoff. HSMs consist of heterogeneous zones that may have different sizes, shapes, compositions, structures, etc. Interactions and competitions among them often lead to unprecedented properties. However, due to the complex structures in a broad range of length scales, it is challenging to unravel deformation physics and strengthening mechanisms underlying extraordinary mechanical properties. Synchrotron x-rays provide powerful techniques and indispensable tools for investigating HSMs at various length scales. Here, we will present in situ high-energy x-ray diffraction and Laue x-ray microdiffraction techniques and their application in studying the HSMs. In this study, the principles of these techniques will be briefly introduced. We will focus on their application in studying stress partitioning and plastic accommodation during tensile deformation, thermo-driven and/or stress-driven phase transformations and various deformation microstructures like geometrically necessary dislocations and local stress/strain distributions, etc., in HSMs. Some important findings will be summarized. Challenging issues remain in studying HSMs and will be discussed.

36 MATERIALS SCIENCE↗