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At least 613 records · Page 34

Juvenile Steelhead Distribution, Migration, Feeding, and Growth in the Columbia River Estuary, Plume, and Coastal Waters

Abstract Relative to extensive research on the freshwater stages of steelhead Oncorhynchus mykiss life history, little is known about the species' estuarine and early marine phases despite the decline of numerous populations, including several from the Columbia River. Comparisons of the distribution, diet, and growth of juvenile steelhead collected during surveys of the Columbia River estuary and coastal waters in May, June, and September 1998–2011 were analyzed for comparisons between fish caught in the estuary and ocean and between hatchery (marked) and putative wild (unmarked) fish. Almost all catches of juvenile steelhead in the ocean occurred during the May surveys (96%). Juvenile steelhead were consistently caught at the westernmost stations (>55 km from shore), indicating an offshore distribution. Based on otolith structure and chemistry, we determined that these juveniles had been in marine waters for an average of only 9.8 d (SD = 10.2). Some of the steelhead that had been in marine waters for 1–3 d were captured at the westernmost edge of survey transects, indicating rapid offshore migration. Estuary caught fish ate fewer prey types and consumed far less food than did ocean caught fish, which ate a variety of prey, including juvenile fishes, euphausiids, and crab megalopae. Estuary and ocean caught unmarked fish exhibited higher feeding intensities, fewer empty stomachs, and better condition than hatchery fish. Growth hormone levels (insulin like growth factor 1 [IGF 1]) in unmarked fish and hatchery fish varied annually, with unmarked fish having slightly higher overall values. In general, the FL, condition, stomach fullness, and IGF 1 of ocean caught steelhead increased with distance offshore. Unlike juveniles of other salmonid species, steelhead appeared to quickly migrate westward from coastal rivers and showed patterns of increased feeding and growth in offshore waters. An understanding of the estuarine and ocean ecology of steelhead smolts may assist in the management of threatened steelhead populations. Received July 18, 2013; accepted November 21, 2013

Daly, Elizabeth A.↗

Evaluating power grid model hydropower feasibility with a river operations model

Production cost models (PCMs) simulate dispatch of generators across a large power grid and are used widely by planners to study the reliability of electricity supply. As energy systems transition away from the thermoelectric technologies that have traditionally balanced electricity supply and demand, hydropower and its representation in PCMs is of increasing importance. A limitation of PCMs applied to continental power grids with diverse generation portfolios is that hydropower generation is simulated without full consideration of complex river dynamics, leading to possible misrepresentation of grid flexibility and performance. In addition, data used in PCMs may reflect outdated operating policies. In this paper we propose a hydropower generation feasibility test for PCMs. The approach uses a detailed hydropower model to determine whether the hourly hydropower schedule from a PCM with simplified monthly parameterization can be attained after accounting for realistic river dynamics and operating policies, such as spill requirements and general water movement and balance through a cascade reservoir system. We perform this hydropower generation test for the ‘Big 10’ hydropower system on the Columbia River (part of the Western Interconnect of the United States), revealing 9% overestimation of available hydropower generation in a PCM solution in an average hydrologic year. Our evaluation provides insight on the cost and opportunities for better representing hydropower in PCMs.

54 ENVIRONMENTAL SCIENCES↗

Threats to a Colorado river provisioning basin under coupled future climate and societal scenarios

Clean, reliable supplies of water are critical to the sustainability and resilience of communities, including water needed for energy and food production, industry, drinking water, and other human and ecological needs. However, water infrastructure and management in the United States are largely optimized for historic conditions—designed and operated to respond to social needs, and past mean and extreme streamflow, which may no longer apply in the future. Temperature, precipitation, ecosystem dynamics, energy and food production, and social systems are all experiencing changes, which cumulatively affect the security of water supply. Here, we examine the impact of these changes in a provisioning basin in the arid Southwest, the San Juan River, which supplies water, food, and energy to the Colorado River and the Rio Grande. Our analysis applies a multi-model framework to examine future climate and water use scenarios. Results demonstrate that the San Juan River basin could experience significant disruptions to water deliveries (-12% to -48% for the drier models) and shortages that exceed manageable thresholds (53% to 73% of water in shorted years), potentially affecting both the local basin as well as other regions that receive water and energy from the San Juan. While water stress metrics vary across the scenarios, results indicate the need for government, industry, and communities to consider options for adapting to water supply shifts. These results raise important questions regarding the resilience of water resources in basins across the West under future scenarios and implications for energy, food, and other water supply needs.

54 ENVIRONMENTAL SCIENCES↗

Sustainable Development Tool Using Meta‐Analysis and DPSIR Framework — Application to Savannah River Basin, U.S.

Abstract The Savannah River Basin (SRB), a highly stressed southeastern river in United States is a conservation priority for State, Federal government, and nongovernment organizations. A four‐stage sustainable development tool was developed in this study using meta‐analysis and the drivers–pressures–state–impacts–responses (DPSIR) framework. Through the synthesis of ~150 references in the SRB this study addressed three research questions: (1) What were the drivers, pressures, state, impacts, and responses (components of DRSIR framework) in SRB (2) Can these components be grouped together from various studies in SRB (3) Can causal chain/loops be developed, and will they be useful for policy and decision making? First in the Stage 1, the state of the SRB was represented (S component of DPSIR), in Stage 2, the drivers–pressures–impacts–responses (DPIR components of DPSIR) were represented, in the third stage (Stage 3) the common units characterizing each DPSIR component were identified. Finally, in Stage 4, the causal chains/loops were developed and organized into scientific research at a level appropriate for building better understanding about SRB and helping stakeholders and policy makers in managing basin sustainability challenges. Although the tool was applied to SRB, the methodology is applicable to other river basins and ecosystems.

Pagan, Janeesa↗

Experimental nitrogen and phosphorus enrichment stimulates multiple trophic levels of algal and detrital-based food webs: a global meta-analysis from streams and rivers

Anthropogenic increases in nitrogen (N) and phosphorus (P) concentrations can strongly influence the structure and function of ecosystems. Even though lotic ecosystems receive cumulative inputs of nutrients applied to and deposited on land, no comprehensive assessment has quantified nutrient-enrichment effects within streams and rivers. We conducted a meta-analysis of published studies that experimentally increased concentrations of N and/or P in streams and rivers to examine how enrichment alters ecosystem structure (state: primary producer and consumer biomass and abundance) and function (rate: primary production, leaf breakdown rates, metabolism) at multiple trophic levels (primary producer, microbial heterotroph, primary and secondary consumers, and integrated ecosystem). Our synthesis included 184 studies, 885 experiments, and 3497 biotic responses to nutrient enrichment. We documented widespread increases in organismal biomass and abundance (mean response = +48%) and rates of ecosystem processes (+54%) to enrichment across multiple trophic levels, with no large differences in responses among trophic levels or between autotrophic or heterotrophic food-web pathways. Responses to nutrient enrichment varied with the nutrient added (N, P, or both) depending on rate versus state variable and experiment type, and were greater in flume and whole-stream experiments than in experiments using nutrient-diffusing substrata. Generally, nutrient-enrichment effects also increased with water temperature and light, and decreased under elevated ambient concentrations of inorganic N and/or P. Overall, increased concentrations of N and/or P altered multiple food-web pathways and trophic levels in lotic ecosystems. Finally, our results indicate that preservation or restoration of biodiversity and ecosystem functions of streams and rivers requires management of nutrient inputs and consideration of multiple trophic pathways.

59 BASIC BIOLOGICAL SCIENCES↗

Genetic variation associated with adult migration timing in lineages of Steelhead and Chinook Salmon in the Columbia River

Abstract With the discovery of a major effect region (GREB1L, ROCK1) for adult migration timing in genomes of both Chinook Salmon and Steelhead, several subsequent studies have investigated the effect size and distribution of early and late migration alleles among populations in the Columbia River. Here, we synthesize the results of these studies for the major lineages of Chinook Salmon and Steelhead that include highly distinct groups in the interior Columbia River that exhibit atypical life histories from most coastal lineage populations of these two species. Whole‐genome studies with high marker density have provided extensive insight into SNPs most associated with adult migration timing, and suites of markers for each species have been genotyped in large numbers of individuals to further validate phenotypic effects. For Steelhead, the largest phenotypic effect sizes have been observed in the coastal lineage (36% of variation for passage timing at Bonneville Dam; 43% of variation for tributary arrival timing) compared to the inland lineage (7.5% of variation for passage timing at Bonneville Dam; 8.4% of variation for tributary arrival timing) that overwinter in freshwater prior to spawning. For Chinook Salmon, large effect sizes have been observed in all three lineages for multiple adult migration phenotypes (Coastal lineage: percentage of variation of 27.9% for passage timing at Bonneville Dam, 28.7% for arrival timing for spawning; Interior ocean type: percentage of variation of 47.6% for passage timing at Bonneville Dam, 39.6% for tributary arrival timing, 77.9% for arrival timing for spawning; Interior stream type: percentage of variation of 35.3% for passage at Bonneville Dam, 9.8% for tributary arrival timing, 4.7% for arrival timing for spawning). Together, these results have extended our understanding of genetic variation associated with life history diversity in distinct populations of the Columbia River, however, much research remains necessary to determine the causal mechanism for this major effect region on migration timing in these species.

Narum, Shawn R.↗

Visual and genetic stock identification of a test fishery to forecast Columbia River spring Chinook salmon stocks 2 weeks into the future

Abstract Modern fisheries management strives to balance opposing goals of protection for weak stocks and opportunity for harvesting healthy stocks. Test fisheries can aid management of anadromous fishes if they can forecast the strength and timing of an annual run with adequate time to allow fisheries planning. Integration of genetic stock identification (GSI) can further maximize utility of test fisheries by resolving run forecasts into weak‐ and healthy‐stock subcomponents. Using 5 years (2017–2022) of test fishery data, our study evaluated accuracy, resolution, and lead time of predictions for stock‐specific run timing and abundance of Columbia River spring Chinook salmon ( Oncorhynchus tshawytscha ). We determined if this test fishery (1) could use visual stock identification (VSI) to forecast at the coarse stock resolution (i.e., classification of “lower” vs. “upriver” stocks) upon which current management is based and (2) could be enhanced with GSI to forecast at higher stock resolution. VSI accurately identified coarse stocks (83.3% GSI concordance), and estimated a proxy for abundance (catch per unit effort, CPUE) of the upriver stock in the test fishery that was correlated ( R 2 = 0.90) with spring Chinook salmon abundance at Bonneville dam (Rkm 235). Salmon travel rates (~8.6 Rkm/day) provided predictions with 2‐week lead time prior to dam passage. Importantly, GSI resolved this predictive ability as finely as the hatchery broodstock level. Lower river stock CPUE in the test fishery was correlated with abundance at Willamette Falls (Rkm 196, R 2 = 0.62), but could not be as finely resolved as achieved for upriver stocks. We described steps to combine VSI and GSI to provide timely in‐season information and with prediction accuracy of ~12.4 mean absolute percentage error and high stock resolution to help plan Columbia River mainstem fisheries.

Hess, Jon E.↗

Global synthesis of the temperature sensitivity of leaf litter breakdown in streams and rivers

Streams and rivers are important conduits of terrestrially derived carbon (C) to atmospheric and marine reservoirs. Leaf litter breakdown rates are expected to increase as water temperatures rise in response to climate change. The magnitude of increase in breakdown rates is uncertain, given differences in litter quality and microbial and detritivore community responses to temperature, factors that can influence the apparent temperature sensitivity of breakdown and the relative proportion of C lost to the atmosphere vs. stored or transported downstream. We synthesized 1025 records of litter breakdown in streams and rivers to quantify its temperature sensitivity, as measured by the activation energy (Ea, in eV). Temperature sensitivity of litter breakdown varied among twelve plant genera for which Ea could be calculated. Higher values of Ea were correlated with lower-quality litter, but these correlations were influenced by a single, N-fixing genus (Alnus). Ea values converged when genera were classified into three breakdown rate categories, potentially due to continual water availability in streams and rivers modulating the influence of leaf chemistry on breakdown. Across all data representing 85 plant genera, the Ea was 0.34 ± 0.04 eV, or approximately half the value (0.65 eV) predicted by metabolic theory. Our results indicate that average breakdown rates may increase by 5–21% with a 1–4 °C rise in water temperature, rather than a 10–45% increase expected, according to metabolic theory. Differential warming of tropical and temperate biomes could result in a similar proportional increase in breakdown rates, despite variation in Ea values for these regions (0.75 ± 0.13 eV and 0.27 ± 0.05 eV, respectively). The relative proportions of gaseous C loss and organic matter transport downstream should not change with rising temperature given that Ea values for breakdown mediated by microbes alone and microbes plus detritivores were similar at the global scale.

54 ENVIRONMENTAL SCIENCES↗

Analysis of Daily Peaking and Run-of-River Operations with Flow Variability Metrics, Considering Subdaily to Seasonal Time Scales

Environmental flows are an important consideration in licensing hydropower projects because operational flow releases can result in adverse conditions to downstream ecological communities. Flow variability assessments have typically focused on pre- and post-dam conditions using metrics based on daily-averaged flow values. This study used subdaily and daily flow data to assess environmental flow response to changes in hydropower operations from daily-peaking to run-of-river. An analysis tool was developed to quantify subdaily to seasonal flow variability metrics and was applied to four hydropower projects that underwent operational changes based on regulatory requirements. Results indicate that the distribution of flows is significantly different between daily-peaking and run-of- river operations and that daily-peaking operations are flashier than run-of-river operations; these differences are seen using hourly-averaged flow datasets and are less pronounced or not noticeable using daily-averaged flow datasets. Of all variability metrics analyzed, hydrograph rise and fall rates were the most sensitive to using daily versus subdaily flow data. This outcome has implications for the development of flow-ecology relationships that quantify effects of rate of change on processes such as fish stranding and displacement, along with habitat stability. The quantification of flow variability statistics should be done using subdaily datasets and metric to accurately represent the nature of hydropower operations , especially for facilities that utilize daily-peaking operations.

54 ENVIRONMENTAL SCIENCES↗

Volcanic stratigraphy and age model of the Kimama deep borehole (Project Hotspot): Evidence for 5.8 million years of continuous basalt volcanism, central Snake River Plain, Idaho

The Snake River Plain of central Idaho represents the world’s best example of a mantle hotspot track impinging upon continental crust and provides a record of bimodal volcanism extending over 12 Ma to the present. Project Hotspot recovered almost 2 km of continuous drill core from the Kimama borehole, located in central Idaho on the axial volcanic zone. The Kimama drill core represents the most complete record of mafic volcanism along the Yellowstone–Snake River Plain hotspot track. A total of 432 basalt flow units, representing 183 basalt flows, 78 basalt flow groups, and 34 super groups, along with 42 sediment interbeds are recognized using volcanic facies observations, stratigraphic relationships, borehole geophysical logs, and paleosecular variation in magnetostratigraphy. Rhyolite and other non-basaltic volcanic materials were not encountered in the drill core. Ages for six basalt lava flows were determined by 40 Ar/ 39 Ar using incremental heating experiments. Paleomagnetic inclination was measured on over 1200 samples collected at roughly 2-m-depth intervals, yielding mean values of paleosecular variation between ±50° to ±70° in Kimama flow groups, close to the expected 61° axial dipole average for the Kimama borehole location. Twenty-three magnetic reversals were identified and correlated to dated geomagnetic chrons and subchrons and compared with the 40 Ar/ 39 Ar radiometric ages. A linear fit to 40 Ar/ 39 Ar dates, geomagnetic chron and subchron boundaries, and volcanogenic zircon U-Pb ages defines a mean accumulation rate of ~320 m/m.y. and extrapolates to a bottom hole age of 6.3 Ma. Average thicknesses of lithologic units increase from 2.7 m (sediment), 4 m (flow units), 10 m (flows), 23 m (flow groups), to 53 m (super groups). On average, one lava flow inundated the Kimama borehole location every 33 k.y. Intercalated sediments, ranging from 0.06 to 24.5 m thick, make up roughly 6% of the drill core and indicate lulls in local volcanic activity that may have lasted up to 77 k.y. Neutron and gamma-ray logs supplement observations from the drill cores: neutron logs document individual flow units through the contrast between massive flow interiors and more porous flow surfaces, and gamma-ray logs document the depth and thickness of sedimentary interbeds and high–K-Fe basalts. The 5.8 m.y. duration of basaltic volcanism in the Kimama drill core implies a steady rate of volcanism, indicating a relatively stable rate of mantle upflow along the lithosphere-mantle boundary in the wake of Yellowstone–Snake River Plain plume volcanism.

58 GEOSCIENCES↗

Depth-First Atmospheric River lifecycle Tracking (DART) v1

This algorithm will identify the genesis and track the lifecycle of atmospheric rivers. It can be applied in different global atmospheric river detection algorithms. It is one of the earliest atmospheric river lifecycle tracking algorithms.

Zhou, Yang↗

Vegetation Representation Influences Projected Streamflow Changes in the Colorado River Basin

Vegetation parameters for the Variable Infiltration Capacity (VIC) hydrologic model were recently updated using observations from the Moderate Resolution Imaging Spectroradiometer (MODIS). Previous work showed that these MODIS-based parameters improved VIC evapotranspiration simulations when compared to eddy covariance observations. Due to the importance of evapotranspiration within the Colorado River basin, this study provided a basin-by-basin calibration of VIC soil parameters with updated MODIS-based vegetation parameters to improve streamflow simulations. Interestingly, while both configurations had similar historic streamflow performance, end-of-century hydrologic projections, driven by 29 downscaled global climate models under the RCP8.5 emissions scenario, differed between the two configurations. The calibrated MODIS-based configuration had an ensemble mean that simulated little change in end-of-century annual streamflow volume (+0.4%) at Lees Ferry, Arizona, relative to the historical period (1960–2005). In contrast, the previous VIC configuration, which is used to inform decisions about future water resources in the Colorado River basin, projected an 11.7% decrease in annual streamflow. Both VIC configurations simulated similar amounts of evapotranspiration in the historical period. However, the MODIS-based VIC configuration did not show as much of an increase in evapotranspiration by the end of the century, primarily within the upper basin’s forested areas. Differences in evapotranspiration projections were the result of the MODIS-based vegetation parameters having lower leaf area index values and less forested area compared to previous vegetation estimates used in recent Colorado River basin hydrologic projections. These results highlight the need to accurately characterize vegetation and better constrain climate sensitivities in hydrologic models.

54 ENVIRONMENTAL SCIENCES↗

Human and Environmental Impacts on River Sediment Microbial Communities

Sediment microbial communities are responsible for a majority of the metabolic activity in river and stream ecosystems. Understanding the dynamics in community structure and function across freshwater environments will help us to predict how these ecosystems will change in response to human land-use practices. Here we present a spatiotemporal study of sediments in the Tongue River (Montana, USA), comprising six sites along 134 km of river sampled in both spring and fall for two years. Sequencing of 16S rRNA amplicons and shotgun metagenomes revealed that these sediments are the richest (~65,000 microbial ‘species’ identified) and most novel (93% of OTUs do not match known microbial diversity) ecosystems analyzed by the Earth Microbiome Project to date, and display more functional diversity than was detected in a recent review of global soil metagenomes. Community structure and functional potential have been significantly altered by anthropogenic drivers, including increased pathogenicity and antibiotic metabolism markers near towns and metabolic signatures of coal and coalbed methane extraction byproducts. The core (OTUs shared across all samples) and the overall microbial community exhibited highly similar structure, and phylogeny was weakly coupled with functional potential. Together, these results suggest that microbial community structure is shaped by environmental drivers and niche filtering, though stochastic assembly processes likely play a role as well. These results indicate that sediment microbial communities are highly complex and sensitive to changes in land use practices.

54 ENVIRONMENTAL SCIENCES↗

Time-domain reflectometer survey across the East River Watershed, Colorado

Lawrence Berkeley National Laboratory (LBNL) collected near-surface point-measurements of soil temperature (file variable TDR_T(C)), volumetric water content (file variable TDR_SM(VWC%)), and soil electrical conductivity (file variable TDR_EC(mS/m)) using a time-domain reflectometer (TDR) at a depth of 25 cm. The survey aimed to characterize the spatial heterogeneity of near-surface hydrological properties at the hillslope scale considering sites with different aspects and elevation within the watershed. The East River is part of the Watershed Function Scientific Focus Area (WFSFA) located in the Upper Colorado River Basin, United States. These data were collected in early July 2019 over four hillslope sites: Pumphouse (north-east facing slope), Bradley (west and east-facing slopes), and Snodgrass (east-facing slope) within the East River watershed. Part of this survey was used to investigate soil-plant interactions at the hillslope scale in Jashvina et al. 2020.

54 ENVIRONMENTAL SCIENCES↗

Total Dissolved Nitrogen and Ammonia Data for the East River Watershed, Colorado (2015-2025)

This data package contains mean values for total dissolved nitrogen (TDN) and ammonia concentrations for water samples taken from the East River Watershed in Colorado. The East River is part of the Watershed Function Scientific Focus Area (WFSFA) located in the Upper Colorado River Basin, United States. TDN was analyzed using a Shimadzu Total Nitrogen Module (TNM-1) combined with the TOC-VCSH analyzer (Shimadzu Corporation, Japan). TNM-1 is a non-specific measurement of total nitrogen (TN). All nitrogen species in samples are combusted to nitrogen monoxide and nitrogen dioxide, then reacted with ozone to form an excited state of nitrogen dioxide. Upon returning to ground state, light energy is emitted. Then, TDN is measured using a chemiluminescence detector. Ammonia was determined using a Lachat's QuikChem 8500 Series 2 Flow Injection Analysis System (LACHAT Instruments, QuckChem 8500 series 2, Automated Ion Analyzer, Loveland, Colorado). When ammonia in water samples is heated (60 degrees C) with salicylate and hypochlorite in an alkaline phosphate buffer, an emerald green color is produced which is proportional to the ammonia concentration. The color is intensified by the addition of nitroprusside. Ethylenediaminetetraacetic acid (EDTA) is added to the buffer to prevent the interference of metal ions (Ca, Mg, and Fe etc.). Ammonia-N is then determined by LACHAT flow injection and a colorimetric assay at an absorbance wavelength 660 nm. (Reference: LACHAT Instruments: QuickChem Method 90-107-06-3-A, Determination of Ammonia by Flow Injection Analysis (High Throughput, Salicylate Method/DCIC) (Multi Matrix method). Written by Lynn Egan (Application group), February 08, 2011.) All files are labeled by location and variable, and data reported are the mean values upon replicate measurements. All samples were analyzed under a rigorous quality assurance and quality control (QA/QC) process as detailed in the methods. This data package contains (1) a zip file (tdn_ammonia_data_2015-2025.zip) containing a total of 299 files: 298 data files of ammonia and TDN data from across the Lawrence Berkeley National Laboratory (LBNL) Watershed Function Scientific Focus Area (SFA) which is reported in .csv files per location and a locations.csv (1 file) with latitude and longitude for each location; (2) a file-level metadata (v7_20260901_flmd.csv) file that lists each file contained in the dataset with associated metadata; (3) a data dictionary (v7_20260901_dd.csv) file that contains terms/column_headers used throughout the files along with a definition, units, and data type; (4) PDF and docx files for the determination of Method Detection Limits (MDLs) for TDN data, which has been updated in 2026-08; and (5) PDF and docx files for the detemination of Method Detection Limits (MDLs) for Ammonia and the Interferences by LACHAT Flow Injection Analysis. Missing values within the anion data files are noted as either "-9999" or "0.0" for not detectable (N.D.) data. There are a total of 105 locations containing TDN and Ammonia-N data. Update 2020-10-07: Updated the data files to remove times from the timestamps, so that only dates remain. The data values have not changed. Update 2021-04-11: Added Determination of Method Detection Limits (MDLs) for DIC, NPOC and TDN Analyses and Determination of Method Detection Limit for Ammonia and the Interferences by LACHAT Flow Injection Analysis documents, which can be accessed as PDFs or with Microsoft Word.Update on 6/10/2022: versioned updates to this dataset was made along with these changes: (1) updated total dissolved nitrogen and ammonia data for all locations up to 2021-12-31, (2) removal of units from column headers in datafiles, (3) added row underneath headers to contain units of variables, (4) restructure of units to comply with CSV reporting format requirements, (5) added -9999 for empty numerical cells, and (6) the addition of the file-level metadata (flmd.csv) and data dictionary (dd.csv) were added to comply with the File-Level Metadata Reporting Format. Update on 2022-09-09: Updates were made to reporting format specific files (file-level metadata and data dictionary) to correct swapped file names, add additional details on metadata descriptions on both files, add a header_row column to enable parsing, and add version number and date to file names (v2_20220909_flmd.csv and v2_20220909_dd.csv). Update on 2022-12-20: Updates were made to both the data files and reporting format specific files. Units were listed incorrectly, but have been fixed to reflect correct units (ug/L). File level metadata (flmd) and data dictionary (dd) files were updated to reflect the updated versions of these files. Available data was added up until 2022-06-01. Update on 2023-08-08: Updates were made to both the data files and reporting format specific files. New available anion data was added, up until 2023-01-05. The file level metadata and data dictionary files were updated to reflect the additional data added. Update on 2024-03-11: Updates were made to both the data files and reporting format specific files. New available anion data was added, up until 2023-10-27. Further, revisions to the data files were made to remove incorrect data points (from 1970 and 2001). The reporting format specific files were updated to reflect the additional data added. Revised versions of the PDF and docx files for determination of MDLs for TDN were added to replace previous versions. Update on 2025-05-15: Updates were made to both the data files and reporting format specific files. New available TDN and Ammonia-N data was added, up until the end of WY2024 (September 30, 2024). International Generic Sample Numbers (IGSNs), when registered, were added to the data files. The reporting format specific files were updated to reflect the additional data added. Update on 2026-09-01: Updates were made to both the data files and reporting format specific files. New available TDN and Ammonia-N data was added, up until the end of WY2025 (September 30, 2025). Updated versions, as of 2026-08-10, of the PDF and docx files for determination of MDLs for TDN data were added to this dataset.

54 ENVIRONMENTAL SCIENCES↗

Dissolved Inorganic Carbon and Dissolved Organic Carbon Data for the East River Watershed, Colorado (2015-2025)

This data package contains mean values for dissolved organic carbon (DOC) and dissolved inorganic carbon (DIC) for water samples taken from the East River Watershed in Colorado. The East River is part of the Watershed Function Scientific Focus Area (WFSFA) located in the Upper Colorado River Basin, United States. DOC and DIC concentrations in water samples were determined using a TOC-VCPH analyzer (Shimadzu Corporation, Japan). DOC was analyzed as non-purgeable organic carbon (NPOC) by purging HCl-acidified samples with carbon-free air to remove DIC prior to measurement. After the acidified sample has been sparged, it is injected into a combustion tube filled with oxidation catalyst heated to 680 oC. The DOC in samples is combusted to CO2 and measured by a non-dispersive infrared (NDIR) detector. The peak area of the analog signal produced by the NDIR detector is proportional to the DOC concentration of the sample. DIC was determined by acidifying the samples with HCl first, and then purging with carbon-free air to release CO2 for analysis by NDIR detector. Total dissolved nitrogen (TDN) was analyzed using a Shimadzu Total Nitrogen Module (TNM-L) combined with the TOC-L analyzer (Shimadzu Corporation, Japan). TNM-L is a non-specific measurement of total nitrogen (TN). All nitrogen species in samples are combusted to nitrogen monoxide and nitrogen dioxide, then reacted with ozone to form an excited state of nitrogen dioxide. Upon returning to ground state, light energy is emitted. Then, TDN is measured using a chemiluminescence detector. All data reported are the mean values upon minimum of three replicate measurements, with a relative standard deviation < 3%. All samples were analyzed under a rigorous quality assurance and quality control (QA/QC) process. This data package contains (1) a zip file (dic_npoc_data_2014-2025.zip) containing a total of 337 files: 336 data files of DIC and NPOC data from across the Lawrence Berkeley National Laboratory (LBNL) Watershed Function Scientific Focus Area (SFA) which is reported in .csv files per location and a locations.csv (1 file) with latitude and longitude for each location; (2) a file-level metadata (v6_20250901_flmd.csv) file that lists each file contained in the dataset with associated metadata; (3) a data dictionary (v6_20250901_dd.csv) file that contains terms/column_headers used throughout the files along with a definition, units, and data type; and (4) PDF and docx files for the determiniation of Method Detection Limits (MDLs) for DIC and NPOC data, which has been updated in 2026-08. Missing values within the anion data files are noted as either "-9999" or "0.0" for not detectable (N.D.) data. There are a total of 113 locations containing DIC/NPOC data. Update on 2020-10-07: Updated the data files to remove times from the timestamps, so that only dates remain. The data values have not changed. Update on 2021-04-11: Added Determination of Method Detection Limits (MDLs) for DIC, NPOC and TDN Analyses document, which can be accessed as a PDF or with Microsoft Word.Update on 6/10/2022: versioned updates to this dataset was made along with these changes: (1) updated dissolved inorganic carbon and dissolved organic carbon data for all locations up to 2021-12-31, (2) removal of units from column headers in datafiles, (3) added row underneath headers to contain units of variables, (4) restructure of units to comply with CSV reporting format requirements, (5) added -9999 for empty numerical cells, and (6) the addition of the file-level metadata (flmd.csv) and data dictionary (dd.csv) were added to comply with the File-Level Metadata Reporting Format. Update on 2022-09-09: Updates were made to reporting format specific files (file-level metadata and data dictionary) to correct swapped file names, add additional details on metadata descriptions on both files, add a header_row column to enable parsing, and add version number and date to file names (v2_20220909_flmd.csv and v2_20220909_dd.csv). Update on 2023-08-08: Updates were made to both the data files and reporting format specific files. New available anion data was added, up until 2023-01-05. The file level metadata and data dictionary files were updated to reflect the additional data added. Update on 2024-03-11: Updates were made to both the data files and reporting format specific files. New available anion data was added, up until 2023-11-21. Further, revisions to the data files were made to remove incorrect data points (from 1970 and 2001). The reporting format specific files were updated to reflect the additional data added. Revised versions of the PDF and docx files for determination of MDLs for DIC and NPOC were added to replace previous versions. Update on 2025-05-15: Updates were made to both the data files and reporting format specific files. New available DIC and NPOC data was added, up until the end of WY2024 (September 30, 2024). International Generic Sample Numbers (IGSNs), when registered, were added to the data files. The reporting format specific files were updated to reflect the additional data added. Update on 2026-09-01: Updates were made to both the data files and reporting format specific files. New available DIC and NPOC data was added, up until the end of WY2025 (September 30, 2025). Updated versions, as of 2026-08-10, of the PDF and docx files for determination of MDLs for DIC and NPOC data were added to this dataset.

54 ENVIRONMENTAL SCIENCES↗

Continuous sensor suite measurements of weather, energy, soil and flux at four PumpHouse sites at the East River, Colorado

The purpose of this package is to monitor energy and water fluxes using a comprehensive set of sensors integrated on a tripod set up at 4 locations at the East River watershed in Colorado in the Upper Colorado River Basin as part of the Scientific Focus Area (SFA) research led by the Lawrence Berkeley National Lab (LBNL). This is a continuous sensor suite measurements of weather, energy, soil and flux at four East River pumphouse sites (ER-PHS1, ER-PHS2, ER-PHS3 and ER-PHS4) include: (1) soil CO2 concentration, CO2 flux and heat flux from soil surface; (2) photosynthetic active radiation flux at 1 m; (3) incoming/outcoming short and long wave radiation at 1 m, and user calculated net short and long wave radiation; (4) oxygen concentration and surface infrared temperature; (5) soil volumetric water content, temperature, and electrical conductivity at 10, 30, 60, 115 cm depth 115 cm depth; (6) soil matric potential and temperature at 30 cm depth; (7) incoming short wave radiation at 3 m height; (8) rainfall precipitation; (9) lightning strikes and strike distances; (10) wind direction and speed, maximum wind gust at 3 m; (11) air temperature, vapor pressure and barometric pressure at 3 m; (12) X _axis_level and Y_axis_level_(degree), tilt of the ATMOS 41 sensor; (13) maximum rainfall rate; (14) relative humidity sensor temperature at 3 m; (15) internally calculated vapor pressure deficit at 3 m with vapor pressure, relative humidity and sensor temperature measurements; (16) user calculated vapor pressure.These datasets contain data from Oct 11 2019 to March 20, 2020, and new datasets will be updated on annual basis. Files uploaded in Excel and Word, with copies in csv and pdf format.

54 ENVIRONMENTAL SCIENCES↗

QA/QC-ed Groundwater Level Time Series in PLM-1 and PLM-6 Monitoring Wells, East River, Colorado (2016-2022)

This data set contains QA/QC-ed (Quality Assurance and Quality Control) water level data for the PLM1 and PLM6 wells. PLM1 and PLM6 are location identifiers used by the Watershed Function SFA project for two groundwater monitoring wells along an elevation gradient located along the lower montane life zone of a hillslope near the Pumphouse location at the East River Watershed, Colorado, USA. These wells are used to monitor subsurface water and carbon inventories and fluxes, and to determine the seasonally dependent flow of groundwater under the PLM hillslope. The downslope flow of groundwater in combination with data on groundwater chemistry (see related references) can be used to estimate rates of solute export from the hillslope to the floodplain and river. QA/QC analysis of measured groundwater levels in monitoring wells PLM-1 and PLM-6 included identification and flagging of duplicated values of timestamps, gap filling of missing timestamps and water levels, removal of abnormal/bad and outliers of measured water levels. The QA/QC analysis also tested the application of different QA/QC methods and the development of regular (5-minute, 1-hour, and 1-day) time series datasets, which can serve as a benchmark for testing other QA/QC techniques, and will be applicable for ecohydrological modeling. The package includes a Readme file, one R code file used to perform QA/QC, a series of 8 data csv files (six QA/QC-ed regular time series datasets of varying intervals (5-min, 1-hr, 1-day) and two files with QA/QC flagging of original data), and three files for the reporting format adoption of this dataset (InstallationMethods, file level metadata (flmd), and data dictionary (dd) files).QA/QC-ed data herein were derived from the original/raw data publication available at Williams et al., 2020 (DOI: 10.15485/1818367). For more information about running R code file (10.15485_1866836_QAQC_PLM1_PLM6.R) to reproduce QA/QC output files, see README (QAQC_PLM_readme.docx). This dataset replaces the previously published raw data time series, and is the final groundwater data product for the PLM wells in the East River. Complete metadata information on the PLM1 and PLM6 wells are available in a related dataset on ESS-DIVE: Varadharajan C, et al (2022). https://doi.org/10.15485/1660962. These data products are part of the Watershed Function Scientific Focus Area collection effort to further scientific understanding of biogeochemical dynamics from genome to watershed scales. 2022/09/09 Update: Converted data files using ESS-DIVE’s Hydrological Monitoring Reporting Format. With the adoption of this reporting format, the addition of three new files (v1_20220909_flmd.csv, V1_20220909_dd.csv, and InstallationMethods.csv) were added. The file-level metadata file (v1_20220909_flmd.csv) contains information specific to the files contained within the dataset. The data dictionary file (v1_20220909_dd.csv) contains definitions of column headers and other terms across the dataset. The installation methods file (InstallationMethods.csv) contains a description of methods associated with installation and deployment at PLM1 and PLM6 wells. Additionally, eight data files were re-formatted to follow the reporting format guidance (er_plm1_waterlevel_2016-2020.csv, er_plm1_waterlevel_1-hour_2016-2020.csv, er_plm1_waterlevel_daily_2016-2020.csv, QA_PLM1_Flagging.csv, er_plm6_waterlevel_2016-2020.csv, er_plm6_waterlevel_1-hour_2016-2020.csv, er_plm6_waterlevel_daily_2016-2020.csv, QA_PLM6_Flagging.csv). The major changes to the data files include the addition of header_rows above the data containing metadata about the particular well, units, and sensor description. 2023/01/18 Update: Dataset updated to include additional QA/QC-ed water level data up until 2022-10-12 for ER-PLM1 and 2022-10-13 for ER-PLM6. Reporting format specific files (v2_20230118_flmd.csv, v2_20230118_dd.csv, v2_20230118_InstallationMethods.csv) were updated to reflect the additional data. R code file (QAQC_PLM1_PLM6.R) was added to replace the previously uploaded HTML files to enable execution of the associated code. R code file (QAQC_PLM1_PLM6.R) and ReadMe file (QAQC_PLM_readme.docx) were revised to clarify where original data was retrieved from and to remove local file paths.

54 ENVIRONMENTAL SCIENCES↗