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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 613 records · Page 34
All sourcesNASA NTRSDOE OSTI
DOE OSTI2024

Flow and Heat Transfer Experimental Study for 3D-Printed Solar Receiving Tubes With Helical Fins at Internal Surface

3D-printing technology was applied to fabricate novel solar thermal collection tubes that have internal heat transfer enhancement fins and external surfaces with high solar absorptivity and low emissivity due to the ability to use different materials in one tube. Helical fins were selected to introduce circumferential flow and thus minimize the circumferential temperature difference of the tube that receives sunlight on one side. The structures of the helical fins were previously optimized from computational fluid dynamics (CFD) analysis with the objective of low entropy production rate by looking for high heat transfer coefficient and relatively lower pressure loss. High-temperature alloy, Inconel-718, was used to 3D print the tubes, which can resist corrosion for the potential application of molten chloride salts as heat transfer fluid. Experimental tests were carried out using water as the heat transfer fluid with the high heat flux provided by a tubular furnace heater. The tested Reynolds number ranges from 3.9 × 10 3 to 6.1 × 10 4 . Heat transfer coefficients of up to 2.8 times that of the smooth tube could be obtained with the expense of increased pressure loss compared to that of the smooth tube. The total system entropy generation can be significantly reduced due to the benefit of heat transfer enhancement that is greater than the expenses of the increased pressure loss. The experimental results of the 3D-printed heat transfer tubes confirmed the CFD-based results of fin optimization. Furthermore, the novel heat transfer tube is recommended for application in concentrating solar power systems.

14 SOLAR ENERGY↗
DOE OSTI2019

Validation of transfer map calculation for electrostatic deflectors in the code COSY INFINITY

The code COSY INFINITY uses a beamline coordinate system with a Frenet–Serret frame relative to the reference particle, and calculates differential algebra-valued transfer maps by integrating the ODEs of motion in the respective vector space over a differential algebra (DA). In our work, we described and performed computation of the DA transfer map of an electrostatic spherical deflector in a laboratory coordinate system using two conventional methods: (1) by integrating the ODEs of motion using a numerical integrator and (2) by computing analytically and in closed form the properties of the respective elliptical orbits from Kepler theory. We compared the resulting transfer maps with (3) the DA transfer map of COSY INFINITY’s built-in electrostatic spherical deflector element ESP and (4) the transfer map of the electrostatic spherical deflector computed using the program GIOS, which uses analytic formulas from a paper1 by Hermann Wollnik regarding second-order aberrations. In addition to the electrostatic spherical deflector, we studied an electrostatic cylindrical deflector, where the Kepler theory is not applicable. We computed the DA transfer map by the ODE integration method (1), and we compared it with the transfer maps by (3) COSY INFINITY’s built-in electrostatic cylindrical deflector element ECL and (4) GIOS. The transfer maps of electrostatic spherical and cylindrical deflectors obtained using the direct calculation methods (1) and (2) are in excellent agreement with those computed using (3) COSY INFINITY. On the other hand, we found a significant discrepancy with (4) the program GIOS.

43 PARTICLE ACCELERATORS↗
DOE OSTI2023

Investigation of Technologies to Improve Condenser Heat Transfer and Performance in a Relevant Coal-Fired Power Plant

Improvements in thermal power-generating plant performance is correlated directly to societal benefits including lower cost of reduced fuel consumption, resulting in lower cost of electricity for the consumer and reduced carbon emissions to the atmosphere. Warm steam exhausted from low-pressure steam turbines is condensed to liquid water on the exterior of thin-walled metal condenser tubes with cooling water passing through the tube interior. The condensation of steam creates a vacuum that supports turbine rotation and the concurrent generation of electricity. This vacuum is optimized when heat transfer across the wall of condenser tube is maximized. Common hindrances to heat transfer include foulants in cooling water that may form and adhere to the interior of condenser tubes, including mineral scale, microbiological films, and particulate deposition. Flowing cooling water may also include a laminar layer at the interior metal surfaces that travels more slowly than bulk water flow, serving to impede heat transfer. On the tube exterior, condensing steam forms an insulating layer of water that flows down the tube and reduces the effectiveness of cooling. Both the interior and exterior barriers to optimal heat transfer may be alleviated to some extent by surface treatments. On the tube interior, hydrophobic coatings may be applied that can reduced the adherence of foulants and of the laminar flow layer to the tube surface. On the tube exterior, hydrophobic coatings or mechanical treatments can be applied that may result in the termination of droplet growth and the departure of droplets from the surface rather than coalescence into a continuous layer of flowing water. Fourteen surface treatments were applied to condenser tubes in this study, including eight interior coatings and six exterior treatments, five of which were coatings and one a microstructural texture. Heat transfer measurement equipment simulating conditions in the condenser of an operating power plant was used to determine heat transfer coefficients by measuring sufficient flow, temperature, water chemistry and other data. Several of the tubes with interior surface treatments showed improvement in heat transfer coefficients compared with a plain (uncoated) tube, and several of the tubes with exterior surface treatments also showed enhanced heat transfer coefficients.

01 COAL, LIGNITE, AND PEAT↗
NASA NTRS2010

Targeting Low-Energy Ballistic Lunar Transfers

Numerous low-energy ballistic transfers exist between the Earth and Moon that require less fuel than conventional transfers, but require three or more months of transfer time. An entirely ballistic lunar transfer departs the Earth from a particular declination at some time in order to arrive at the Moon at a given time along a desirable approach. Maneuvers may be added to the trajectory in order to adjust the Earth departure to meet mission requirements. In this paper, we characterize the (Delta)V cost required to adjust a low-energy ballistic lunar transfer such that a spacecraft may depart the Earth at a desirable declination, e.g., 28.5(white bullet), on a designated date. This study identifies the optimal locations to place one or two maneuvers along a transfer to minimize the (Delta)V cost of the transfer. One practical application of this study is to characterize the launch period for a mission that aims to launch from a particular launch site, such as Cape Canaveral, Florida, and arrive at a particular orbit at the Moon on a given date using a three-month low-energy transfer.

Low-energy transfers↗
DOE OSTI2016

Clad to coolant heat transfer during RIA in PWR conditions

The power pulse during an insertion of reactivity accident (RIA) leads to a transient heating of the fuel. Heat transfer toward the coolant through the clad and associated temperature transient of the clad is of safety significance since it may largely impact the risk of clad failure. For sufficiently large enthalpy deposited within the fuel, clad temperature increases rapidly and this can lead to coolant boiling. This paper concerns the critical review of the present understanding and of the models for the clad to coolant heat transfer in RIA for PWR conditions. The results of past experiments are reviewed and the reliability of current models dedicated to these conditions is analyzed. It appears that the use of classical models for wall to fluid heat transfer does not allow predicting the clad temperature transient as measured in RIA-related experiments. The deviation is all the more large when film boiling conditions are reached. To reproduce the experimental data, some correlations of heat transfer can be fitted but the reliability of such model out of the range of conditions of the experimental data is low. It is mainly due to a rather low level of understanding of the heat transfer in very transient conditions (i.e. when the time scale of variation of the main heat transfer parameters, like a wall temperature, is less than the typical internal time scale of the heat transfer process itself). It results in a very large scattering in the numerical simulation of clad temperature when several fuel codes are considered. To improve the reliability of these calculations, it is believed that the study of transient boiling heat transfer thanks to devoted experimental facilities is required.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗
DOE OSTI2019

Nonlinear Heat Transfer From Particles in Supercritical Carbon Dioxide Near the Critical Point

Particle to fluid heat transfer in supercritical carbon dioxide (sCO 2 ) is encountered in energy technologies and in materials synthesis. Near the critical point, the extreme pressure and temperature sensitivity of sCO 2 ’s thermal conductivity will change the expected heat transfer in these systems. This study combines the Kirchoff transformation for thermal conductivity with the conduction shape factor for a sphere, allowing prediction of heat transfer in these systems and quantification of the impact of these property changes. Results show that the heat transfer is non-linear for supercritical heat transfer, with the non-linearity particularly significant near the critical point. The results also show that approaches such as an average thermal conductivity based on film temperature are unlikely to accurately predict heat transfer in this region. The methods described in this paper can be applied to fluid–particle heat transfer at low Reynolds number in other fluids with large variations in thermal conductivity.

42 ENGINEERING↗
DOE OSTI2015

Influence of modes of metal transfer on grain structure and direction of grain growth in low nickel austenitic stainless steel weld metals

The present study elaborately discussed the effect of different modes of metal transfer (i.e., short circuit mode, spray mode and pulse mode) on grain structure and direction of grain growth in low nickel austenitic stainless steel weld metals. Electron backscattered diffraction (EBSD) analysis was used to study the grain growth direction and grain structure in weld metals. The changes in grain structure and grain growth direction were found to be essentially varied with the weld pool shape and acting forces induced by modes of metal transfer at a constant welding speed. Short circuit mode of metal transfer owing to higher Marangoni force (M{sub a}) and low electromagnetic force (R{sub m}) promotes the lower weld pool volume (Γ) and higher weld pool maximum radius (r{sub m}). Short circuit mode also shows curved and tapered columnar grain structures and the grain growth preferentially occurred in <001> direction. In contrast, spray mode of metal transfer increases the Γ and reduces the r{sub m} values due to very high R{sub m} and typically reveals straight and broad columnar grain structures with preferential growth direction in <111>. In the pulse mode of metal transfer relatively high M{sub a} and R{sub m} simultaneously increase the weld pool width and the primary penetration which might encourage relatively complex grain growth directions in the weld pool and cause a shift of major intensity from <001> to <111> direction. It can also be concluded that the fusion zone grain structure and direction of grain growth are solely dependent on modes of metal transfer and remain constant for a particular mode of metal transfer irrespective of filler wire used. - Highlights: • Welded joints of LNiASS were prepared by varying modes of metal transfer. • Weld pool shape, grain structure and grain growth direction were studied. • Short circuit mode shows curved and tapered grain growth in <001> direction. • Spray mode shows straight and broad columnar grain growth in <111> direction. • Pulse mode shows complex grain growth with a shift in growth direction.

36 MATERIALS SCIENCE↗
DOE OSTI2016

Ultrafast Spectroscopic Signatures of Coherent Electron-Transfer Mechanisms in a Transition Metal Complex

The prevalence of ultrafast electron-transfer processes in light-harvesting materials has motivated a deeper understanding of coherent reaction mechanisms. Kinetic models based on the traditional (equilibrium) form of Fermi’s Golden Rule are commonly employed to understand photoinduced electron-transfer dynamics. These models fail in two ways when the electron-transfer process is fast compared to solvation dynamics and vibrational dephasing. First, electron-transfer dynamics may be accelerated if the photoexcited wavepacket traverses the point of degeneracy between donor and acceptor states in the solvent coordinate. Second, traditional kinetic models fail to describe electron-transfer transitions that yield products which undergo coherent nuclear motions. We address the second point in this work. Transient absorption spectroscopy and a numerical model are used to investigate coherent back-electron-transfer mechanisms in a transition metal complex composed of titanium and catechol, [Ti(cat) 3] 2– . The transient absorption experiments reveal coherent wavepacket motions initiated by the back-electron-transfer process. Model calculations suggest that the vibrationally coherent product states may originate in either vibrational populations or coherences of the reactant. That is, vibrational coherence may be produced even if the reactant does not undergo coherent nuclear motions. Lastly, the analysis raises a question of broader significance: can a vibrational population-to-coherence transition (i.e., a nonsecular transition) accelerate electron-transfer reactions even when the rate is slower than vibrational dephasing?

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2019

A Consistent Model of Ultrafast Energy Transfer in Peridinin Chlorophyll-a Protein Using Two-Dimensional Electronic Spectroscopy and Förster Theory

Solar light harvesting begins with electronic energy transfer in structurally complex light-harvesting antennae such as the peridinin chlorophyll-a protein from dinoflagellate algae. Peridinin chlorophyll-a protein is composed of a unique combination of chlorophylls sensitized by carotenoids in a 4:1 ratio, and ultrafast spectroscopic methods have previously been utilized in elucidating their energy transfer pathways and timescales. However, due to overlapping signals from various chromophores and competing pathways and timescales, a consistent model of intra-protein electronic energy transfer has been elusive. Here, we used broadband two-dimensional electronic spectroscopy, which alleviates the spectral congestion by dispersing excitation and detection wavelengths. Inter-chromophoric couplings appear as cross peaks in two-dimensional electronic spectra, and these spectral features were observed between the peridinin S2 states and chlorophyll-a Qx and Qy states. In addition, the inherently high time- and frequency-resolution of 2DES enabled accurate determination of the ultrafast energy transfer dynamics. Kinetic analysis near the peridinin S1 excited state absorption, which forms in 24 fs after optical excitation, reveals an ultrafast energy transfer pathway from the peridinin S2 state to the chlorophyll-a Qx state—a hitherto unconfirmed pathway critical for fast inter-chromophoric transfer. Lastly, we propose a model of ultrafast peridinin chlorophyll-a protein photophysics that (1) includes a conical intersection between peridinin S2 and S1 states in order to explain both the ultrafast peridinin S1 formation and the residual peridinin S2 population for energy transfer to chlorophyll-a, and (2) computationally- and experimentally-derived peridinin S2 site energies that support the observed ultrafast peridinin S2 to chlorophyll-a Qx energy transfer.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2016

Directional charge transfer mediated by mid-gap states: A transient absorption spectroscopy study of CdSe quantum dot/β-Pb 0.33 V 2 O 5 heterostructures

For solar energy conversion, not only must a semiconductor absorb incident solar radiation efficiently but also its photoexcited electron—hole pairs must further be separated and transported across interfaces. Charge transfer across interfaces requires consideration of both thermodynamic driving forces as well as the competing kinetics of multiple possible transfer, cooling, and recombination pathways. In this work, we demonstrate a novel strategy for extracting holes from photoexcited CdSe quantum dots (QDs) based on interfacing with β-Pb 0.33 V 2 O 5 nanowires that have strategically positioned midgap states derived from the intercalating Pb 2+ ions. Unlike midgap states derived from defects or dopants, the states utilized here are derived from the intrinsic crystal structure and are thus homogeneously distributed across the material. CdSe/β-Pb 0.33 V 2 O 5 heterostructures were assembled using two distinct methods: successive ionic layer adsorption and reaction (SILAR) and linker-assisted assembly (LAA). Transient absorption spectroscopy measurements indicate that, for both types of heterostructures, photoexcitation of CdSe QDs was followed by the transfer of electrons to the conduction band of β-Pb 0.33 V 2 O 5 nanowires and holes to the midgap states of β-Pb 0.33 V 2 O 5 nanowires. Holes were transferred on time scales less than 1 ps, whereas electrons were transferred more slowly on time scales of ~2 ps. In contrast, for analogous heterostructures consisting of CdSe QDs interfaced with V 2 O 5 nanowires (wherein midgap states are absent), only electron transfer was observed. Interestingly, electron transfer was readily achieved for CdSe QDs interfaced with V 2 O 5 nanowires by the SILAR method; however, for interfaces incorporating molecular linkers, electron transfer was observed only upon excitation at energies substantially greater than the bandgap absorption threshold of CdSe. Furthermore, transient absorbance decay traces reveal longer excited-state lifetimes (1–3 μs) for CdSe/β-Pb 0.33 V 2 O 5 heterostructures relative to bare β-Pb 0.33 V 2 O 5 nanowires (0.2 to 0.6 μs); the difference is attributed to surface passivation of intrinsic surface defects in β-Pb 0.33 V 2 O 5 upon interfacing with CdSe.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2022

Compositionally Tuning Electron Transfer from Photoexcited Core/Shell Quantum Dots via Cation Exchange

It is critical to find methods to control the thermodynamic driving force for photoexcited charge transfer from quantum dots (QDs) and explore how this affects charge transfer rates, since the efficiency of QD-based photovoltaic and photocatalysis technologies depends on both this rate and the associated energetic losses. In this work, we introduce a single-pot shell growth and Cu-catalyzed cation exchange method to synthesize Cd x Zn 1-x Se/Cd y Zn 1-y S QDs with tunable driving forces for electron transfer. Functionalizing them with two molecular electron acceptors—naphthalenediimide (NDI) and anthraquinone (AQ)—allowed us to probe nearly 1 eV of driving forces. For AQ, at lower driving forces, we find that higher Zn content results in a 130-fold increase of electron transfer rate constants. However, at higher driving forces electron transfer dynamics are unaltered. Here, the data are understood using an Auger-assisted electron transfer model and analyzed with computational work to determine approximate binding geometries of these electron acceptors. Our work provides a method to tune QD reducing power and produces useful metrics for optimizing QD charge transfer systems that maximize rates of electron transfer while minimizing energetic losses.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2023

Proton transfer kinetics of transition metal hydride complexes and implications for fuel-forming reactions

Proton transfer reactions involving transition metal hydride complexes are prevalent in a number of catalytic fuel-forming reactions, where the proton transfer kinetics to or from the metal center can have significant impacts on the efficiency, selectivity, and stability associated with the catalytic cycle. Here, this review correlates the often slow proton transfer rate constants of transition metal hydride complexes to their electronic and structural descriptors and provides perspective on how to exploit these parameters to control proton transfer kinetics to and from the metal center. A toolbox of techniques for experimental determination of proton transfer rate constants is discussed, and case studies where proton transfer rate constant determination informs fuel-forming reactions are highlighted. Opportunities for extending proton transfer kinetic measurements to additional systems are presented, and the importance of synergizing the thermodynamics and kinetics of proton transfer involving transition metal hydride complexes is emphasized.

08 HYDROGEN↗
DOE OSTI2016

Inter-phase heat transfer and energy coupling in turbulent dispersed multiphase flows

Here, the present paper addresses important fundamental issues of inter-phase heat transfer and energy coupling in turbulent dispersed multiphase flows through scaling analysis. In typical point-particle or two-fluid approaches, the fluid motion and convective heat transfer at the particle scale are not resolved and the momentum and energy coupling between fluid and particles are provided by proper closure models. By examining the kinetic energy transfer due to the coupling forces from the macroscale to microscale fluid motion, closure models are obtained for the contributions of the coupling forces to the energy coupling. Due to the inviscid origin of the added-mass force, its contribution to the microscale kinetic energy does not contribute to dissipative transfer to fluid internal energy as was done by the quasi-steady force. Time scale analysis shows that when the particle is larger than a critical diameter, the diffusive-unsteady kernel decays at a time scale that is smaller than the Kolmogorov time scale. As a result, the computationally costly Basset-like integral form of diffusive-unsteady heat transfer can be simplified to a non-integral form. Conventionally, the fluid-to-particle volumetric heat capacity ratio is used to evaluate the relative importance of the unsteady heat transfer to the energy balance of the particles. Therefore, for gas-particle flows, where the fluid-to-particle volumetric heat capacity ratio is small, unsteady heat transfer is usually ignored. However, the present scaling analysis shows that for small fluid-to-particle volumetric heat capacity ratio, the importance of the unsteady heat transfer actually depends on the ratio between the particle size and the Kolmogorov scale. Furthermore, the particle mass loading multiplied by the heat capacity ratio is usually used to estimate the importance of the thermal two-way coupling effect. Through scaling argument, improved estimates are established for the energy coupling parameters of each energy exchange mechanism between the phases.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2019

FTLADS: Object-Logging Based Fault-Tolerant Big Data Transfer System Using Layout Aware Data Scheduling

The layout-aware data scheduling (LADS) data movement framework optimizes congestion for end-to-end data transfers. During data transfer, LADS can avoid congested storage elements by exploiting the underlying storage layout at each endpoint. This improves the I/O bandwidth and hence the data transfer rate across high-speed networks. However, the absence of fault tolerance (FT) in LADS results in data retransmission overhead and may lead to possible data integrity issues upon faults. In this paper, we propose object-logging FT mechanisms to avoid transmitting the objects that are successfully written into the parallel file system (PFS) at the sink end. Depending on the number of log files created for the whole dataset, we have classified our FT mechanisms into three different categories: file logger, transaction logger, and universal logger. Also, to address the space overhead, we have proposed different methods of populating the log files with the information of the successfully transferred objects. We have evaluated the data transfer performance and recovery time overhead of the proposed object-logging-based FT mechanisms on the LADS data transfer framework. Our experimental results reflect that FT mechanisms exhibit negligible overhead (<; 1%) with respect to the data transfer time. Yet, the fault recovery time is 10% higher than the total data transfer time at any fault point.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2025

Genetic Transfer in Action: Uncovering DNA Flow in an Extremophilic Microbial Community

ABSTRACT Horizontal genetic transfer (HGT) is a significant driver of genomic novelty in all domains of life. HGT has been investigated in many studies however, the focus has been on conspicuous protein‐coding DNA transfers that often prove to be adaptive in recipient organisms and are therefore fixed longer‐term in lineages. These results comprise a subclass of HGTs and do not represent exhaustive (coding and non‐coding) DNA transfer and its impact on ecology. Uncovering exhaustive HGT can provide key insights into the connectivity of genomes in communities and how these transfers may occur. In this study, we use the term frequency‐inverse document frequency (TF‐IDF) technique, that has been used successfully to mine DNA transfers within real and simulated high‐quality prokaryote genomes, to search for exhaustive HGTs within an extremophilic microbial community. We establish a pipeline for validating transfers identified using this approach. We find that most DNA transfers are within‐domain and involve non‐coding DNA. A relatively high proportion of the predicted protein‐coding HGTs appear to encode transposase activity, restriction‐modification system components, and biofilm formation functions. Our study demonstrates the utility of the TF‐IDF approach for HGT detection and provides insights into the mechanisms of recent DNA transfer.

Microbiology↗
DOE OSTI2019

Computationally Efficient Training of Deep Neural Networks via Transfer Learning

Transfer learning is a highly successful approach to train deep neural networks for customized image recognition tasks. Transfer learning leverages deep learning models that are previously trained on massive datasets and re-trains the network for a novel image recognition dataset. Typically, the advantage of transfer learning has been measured in sample efficiency, but instead, we investigate the computational efficiency of transfer learning. A good pre-trained model provides features that can be used as input to a new classifier (usually the top layers of a neural network). We show that if a good pre-trained model is selected, that training a new classifier can be much more computationally efficient than training a deep neural network without transfer learning. The first step in transfer learning is to select a pre-trained model to use as a feed-forward network for generating features. Here this selection process either uses human intuition/convenience or a methodical but computationally intensive validation loop. Instead, we would prefer a method to select the pre-trained model that will produce the best transfer results for the least amount of computation. To this end, we provide a computationally efficient metric for the fit between a pre-trained model and a novel image recognition task. The better the fit, the less computation will be needed to re-train the pre-trained model for the novel task. As machine learning becomes ubiquitous, highly-accurate trained models will proliferate and computationally efficient transfer learning methods will enable rapid development of new image recognition models.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2017

Ultrafast direct electron transfer at organic semiconductor and metal interfaces

The ability to control direct electron transfer can facilitate the development of new molecular electronics, light-harvesting materials, and photocatalysis. However, control of direct electron transfer has been rarely reported, and the molecular conformation–electron dynamics relationships remain unclear. We describe direct electron transfer at buried interfaces between an organic polymer semiconductor film and a gold substrate by observing the first dynamical electric field–induced vibrational sum frequency generation (VSFG). In transient electric field– induced VSFG measurements on this system, we observe dynamical responses (<150 fs) that depend on photon energy and polarization, demonstrating that electrons are directly transferred from the Fermi level of gold to the lowest unoccupied molecular orbital of organic semiconductor. Transient spectra further reveal that, although the interfaces are prepared without deliberate alignment control, a sub-ensemble of surface molecules can adopt conformations for direct electron transfer. Density functional theory calculations support the experimental results and ascribe the observed electron transfer to a flat-lying polymer configuration in which electronic orbitals are found to be delocalized across the interface. The present observation of direct electron transfer at complex interfaces and the insights gained into the relationship between molecular conformations and electron dynamics will have implications for implementing novel direct electron transfer in energy materials.

36 MATERIALS SCIENCE↗
DOE OSTI2024

Assessing horizontal gene transfer in the rhizosphere of Brachypodium distachyon using fabricated ecosystems (EcoFABs)

ABSTRACT Horizontal gene transfer (HGT) is a major process by which genes are transferred between microbes in the rhizosphere. However, examining HGT remains challenging due to the complexity of mimicking conditions within the rhizosphere. Fabricated ecosystems (EcoFABs) have been used to investigate several complex processes in plant-associated environments. Here we show that EcoFABs are efficient tools to examine and measure HGT frequency in the rhizosphere. We provide the first demonstration of gene transfer via a triparental conjugation system in the Brachypodium distachyon rhizosphere in an EcoFAB using Pseudomonas putida KT2440 as both donor and recipient bacterial strain with the donor containing a mobilizable and non-self-transmissible plasmid. We observed that the frequency of plasmid transfer in the rhizosphere is potentially dependent on the plant developmental stage and the composition and amount of root exudates. The frequency of plasmid transfer also increased with higher numbers of donor cells. We demonstrate the transfer of plasmid from P. putida to another B. distachyon root colonizer, Burkholderia sp. OAS925, showing HGT within a rhizosphere microbial community. Environmental stresses also influenced the rate and efficiency of HGT in the rhizosphere between different species and genera. This study provides a robust workflow to evaluate transfer of engineered plasmids in the rhizosphere when such plasmids are potentially introduced in a field or other plant-associated environments. IMPORTANCE We report the use of EcoFABs to investigate the HGT process in a rhizosphere environment. It highlights the potential of EcoFABs in recapitulating the dynamic rhizosphere conditions as well as their versatility in studying plant-microbe interactions. This study also emphasizes the importance of studying the parameters impacting the HGT frequency. Several factors such as plant developmental stages, nutrient conditions, number of donor cells, and environmental stresses influence gene transfer within the rhizosphere microbial community. This study paves the way for future investigations into understanding the fate and movement of engineered plasmids in a field environment.

Priya, Shweta↗