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At least 613 records · Page 34

The role of soil redox conditions in microbial phosphorus cycling in humid tropical forests

Humid tropical forests are among the most productive ecosystems globally, yet they often occur on soils with high phosphorus (P) sorption capacity, lowering P availability to biota. Short-term anoxic events are thought to release sorbed P and enhance its acquisition by soil microbes. However, the actual effects of anoxic conditions on microbial P acquisition in humid tropical forest soils are surprisingly poorly studied. We used laboratory incubations of bulk soils, NanoSIMS analysis of single microbial cells, and landscape-scale measurements in the Luquillo Experimental Forest (LEF), Puerto Rico to test the hypothesis that anoxic conditions increase microbial P acquisition in humid tropical forests. In laboratory and field experiments, we found that microbial P uptake generally decreased under anoxic conditions, leading to high microbial carbon (C) to P ratios in anoxic soils. The decreased P acquisition under anoxic conditions was correlated with lower microbial C use efficiency (CUE), an index of microbial energy transfer in ecosystems. Phosphorus amendments to anoxic soils led to increased microbial P uptake and higher CUE suggesting that microbes were less able to access and utilize P under natural low redox conditions. Under oxic conditions, microbial C:P ratios and CUE did not respond to changes in substrate stoichiometry. These results challenge the existing paradigm by showing that anoxic conditions can decrease microbial P uptake and ultimately constrain microbial CUE. Finally, our findings indicate that soil redox conditions tightly couple soil P and C cycles and advance our understanding of controls on P cycling in humid tropical forest ecosystems.

59 BASIC BIOLOGICAL SCIENCES↗

Synthesis and Characterization of a Novel Ligand and Spectroscopic Study of the Formation of its Complexes with Different Cations and Their Sensory Characteristics

A new ligand (L), N,N′-bis(2-hydroxybenzyl)-1,2-diaminoethane, was synthesized and characterized. The sensing behavior of L toward various metal ions was investigated by spectrofluorometric and UV-Vis spectrophotometric methods. The sensor displayed selective and sensitive recognition toward Fe{sup 3+} and Fe{sup 2+} in acetonitrile. The fluorescence of L was quenched mainly by Fe{sup 3+}, and a considerable enhancement of fluorescence was observed in the presence of Zn{sup 2+}. Using multivariate hard modeling and stoichiometry, the concentration, spectral profiles, and formation constants of the studied complexes were calculated.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

A Colorimetric and Fluorescent Chemosensor of Fe{sup 3+} Based on an Asymmetrical Squarylium Dye

A novel asymmetrical squarylium-dye-based dual signaling probe was synthesized and found to exhibit colorimetric and fluorescent properties on selective binding towards Fe{sup 3+} in ethanol/water (4:1, v/v) solution. The binding constant was determined to be 7.69 × 10{sup 2} M{sup –1}, and the detection limit of SQ was 9.158 × 10{sup –6} M. Most importantly, the 1:2 stoichiometry of the host-guest complexation was confirmed by Job’s method. Moreover, the high sensing ability of the receptor towards Fe{sup 3+} was also investigated by the electrochemical technique.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Study of (DNPs){sub x}/CuTl-1223 Nanoparticle-Superconductor Composites

Sol-gel and solid-state reaction methods were used to synthesize diamond nanoparticles (DNPs) and (DNPs){sub x}/CuTl-1223 (x = 0, 0.25, 0.50, and 1.00 wt.%) nanoparticle-superconductor composites, respectively. Effects of these DNPs on structural, morphological, compositional, and transport properties of CuTl-1223 superconducting phase were investigated by different experimental techniques such as X-ray diffraction (XRD), energy dispersive X-ray (EDX) spectroscopy, scanning electron microscopy (SEM), and resistivity versus temperature (R-T) measurements. The unchanged crystal structure and stoichiometry of host CuTl-1223 superconducting matrix with addition of DNPs gave evidence about the dispersion of nanoparticles at the grain boundaries of the host matrix, which may heal up the inter-granular voids and pores resulting in enhanced inter-grain connectivity. Critical transition temperature T{sub c} (0) and hole concentration of CuTl-1223 superconductor were observed to be increased with addition of DNPs up to a certain optimum value (i.e. x = 0.5 wt.%).

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Tailoring the Structural, Optical and Magnetic Properties of NiFe{sub 2}O{sub 4} by Varying Annealing Temperature

Magnetic nanocrystalline NiFe{sub 2}O{sub 4} nanoparticles of size ranging between 13 and 19 nm were synthesized by the hydrothermal method using polyethylene glycol (PEG) as surfactant. The role of annealing on phase, crystallite size, and morphology was determined by X-ray diffraction (XRD) and transmission electron microscopy (TEM). Energy-dispersive X-ray spectroscopy (EDX) was used for qualitative analysis. X-ray diffraction confirmed the single phase of as-obtained particles. TEM revealed a spherical morphology having an average particle size of 13.73 nm at 523 K and rises to 14.89, 16.42, and 21.14 nm at 623, 723, and 823 K respectively, which is approximately the same as the crystallite size determined from XRD. EDX results confirmed that elemental ratios were in stoichiometry. Fourier transform infrared (FTIR) spectral analysis demonstrates the formation of M-O bond in NiFe{sub 2}O{sub 4} nanoparticles. The optical spectra obtained from UV-visible spectroscopy revealed that nanoparticles have direct allowed energy band gap of 2.34, 2.47, 2.70, and 2.20 eV at 523, 623, 723, and 823 K respectively. A vibrating sample magnetometer (VSM) was used at room temperature for magnetic measurements which further showed ferromagnetic behavior of as-synthesized material. In addition, it was found that saturation magnetization increases with an increase of annealing temperature while coercivity decreases with temperature.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Structural and Magnetic Properties of La{sub 1−x}(Ca,Sr){sub x}MnO{sub 3} Powders Produced by the Hydrothermal Method

La{sub 1−x}(Ca,Sr){sub x}MnO{sub 3} manganites have been produced using the hydrothermal method. The influence of the concentration of La, Ca, and Sr on the structural, morphological, and magnetic properties was studied and analyzed. The X-ray diffraction analysis showed that samples crystallized in rhombohedral or trigonal symmetries depending on the stoichiometry. The morphological analyses obtained by using scanning electron microscopy showed cauliflower-type microstructures in all samples. Energy-dispersive spectroscopy studies were also performed, evidencing not only the presence of the constituent elements but an oxygen deficiency and manganese-relative excess in all the samples. This fact is suggested as the cause of the unusual magnetic behavior where a low-temperature re-entrant phase was observed within the ferromagnetic matrix in some of the samples attributed to spin frustration. Furthermore, for some samples, a critical Curie temperature higher than the reported values is attributed to the relative excess of manganese ions, which can occupy other sites in the lattices as interstices or La, Ca, and Sr sites.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Structural and Hysteretic Properties of La{sub 0.7}Ca{sub 0.3−x}Sr{sub x}MnO{sub 3} Manganites Using the Hydrothermal Route

Manganitesof La{sub 0.7}Ca{sub 0.3−x}Sr{sub x}MnO{sub 3} have been produced using the hydrothermal method. The influence of the concentration of La, Ca, and Sr on the structural, morphological, and magnetic properties was studied and analyzed. The x-ray diffraction studies showed the occurrence of orthorombic and trigonal symmetries in the crystalline structure, depending on the stoichiometry. X-ray photoelectron spectroscopy studies were performed, showing the presence of the elements La3d, Ca2p, Sr3d, Mn2p, and O1s. In all samples, a deficiency of oxygen was observed and ascribed to hydroxide formation. The FTIR spectra shows the Mn–O–Mn bonds in the stretching vibration mode; on the other hand, a great relative amount of Mn{sup 4+} ions that are not included in the manganite phase was observed. Furthermore, morphology analyses developed using scanning electron microscopy showed cauliflower-type microstructures in all samples. The dependence of magnetization on magnetic field was also studied where a low coercivity and a high-saturation magnetization were evidenced. Values of the squareness ratio coefficient ranged between 0.0587 and 0.0867, indicating that the individual particles exhibit a strong random anisotropy.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Doping Effect of Fe Ions on the Structural, Electrical, and Magnetic Properties of SrTiO{sub 3} Nanoceramic Matrix

In the present investigation, strontium titanate nanoceramic was synthesized by incorporating iron (Fe) ion with general formula SrTi{sub 1−x}Fe{sub x}O{sub 3} (x = 0.0, 0.1, 0.2, and 0.4) using sol-gel autocombustion method. The effect of Fe ions on the structural, morphological, electrical, dielectric, and magnetic properties of the prepared matrix has been investigated by various characterization techniques with the appropriate formulation. The structural properties such as phase space, crystallite size (D), and lattice parameter (a) of prepared matrix are calculated by X-ray diffraction (XRD) technique. The functional groups were analyzed by Fourier transform infrared spectroscopy (FT-IR). The surface morphology of the prepared nanoceramic matrix has been determined by using field emission scanning electron microscopy (FE-SEM) analysis. Calculation of average particle size and diffraction patterns was confirmed by using images from transmission electron microscopy (TEM) and selected area electron diffraction pattern (SAED), respectively. An energy dispersive spectrum analysis (EDS) confirmed the compositional stoichiometry in the investigated matrix. Electrical conductivity increased the prepared sample due to the increasing in the Fe concentration and temperature. The dielectric parameters in the frequency range of 30 Hz to 1 MHz were found higher at lower frequencies. The pure SrTiO{sub 3} matrix shows a paramagnetic nature at room temperature, but for a higher concentration of Fe doping was used to observe the weak ferromagnetic nature. Therefore, due to Fe ion concentration, the properties of the prepared matrix have been completely varied and enhancement in the magnetic properties was observed.

77 NANOSCIENCE AND NANOTECHNOLOGY↗

Effect of Annealing Temperature on Structure and Magnetic Properties of Zn{sub 0.94}Mg{sub 0.01}Mn{sub 0.05}O Nanoparticles

Structural and magnetic characteristics of Zn{sub 0.94}Mg{sub 0.01}Mn{sub 0.05}O (ZnMgMnO) nanoparticles synthesized by Sol-Gel preparation technique in a wide temperature range were reported. The influence of annealing temperature on the crystal structure of ZnMgMnO nanoparticles was figured out by X-ray diffraction technique (XRD). To optimize the annealing temperature and reveal the particle formation and size, Scanning Electron Microscope (SEM) imaging technique was performed. The required stoichiometry of the synthesized samples was obtained by an energy dispersive X-ray analysis technique (EDX). Quantum Design Vibrating Sample Magnetometer (QDVSM) tool was used for the magnetic characterizations of Zn{sub 0.94}Mg{sub 0.01}Mn{sub 0.05}O composition. Magnetization measurements as a function of magnetic field (M-H) were performed in the magnetic field up to 10 kOe. Temperature dependence of magnetization measurements (M-T) was taken between 10 and 320 K temperature ranges.

77 NANOSCIENCE AND NANOTECHNOLOGY↗

Organic phosphorus in the terrestrial environment: a perspective on the state of the art and future priorities

Here, the dynamics of phosphorus (P) in the environment is important for regulating nutrient cycles in natural and managed ecosystems and an integral part in assessing biological resilience against environmental change. Organic P (P o ) compounds play key roles in biological and ecosystems function in the terrestrial environment being critical to cell function, growth and reproduction. We asked a group of experts to consider the global issues associated with P o in the terrestrial environment, methodological strengths and weaknesses, benefits to be gained from understanding the P o cycle, and to set priorities for P o research. In conclusion, we identified seven key opportunities for P o research including: the need for integrated, quality controlled and functionally based methodologies; assessment of stoichiometry with other elements in organic matter; understanding the dynamics of P o in natural and managed systems; the role of microorganisms in controlling P o cycles; the implications of nanoparticles in the environment and the need for better modelling and communication of the research. Each priority is discussed and a statement of intent for the P o research community is made that highlights there are key contributions to be made toward understanding biogeochemical cycles, dynamics and function of natural ecosystems and the management of agricultural systems.

54 ENVIRONMENTAL SCIENCES↗

On the modeling paradigm of plant root nutrient acquisition

Plant root nutrient acquisition, and to a lesser extent foliar nutrient uptake, maintain plant metabolism and strongly regulate terrestrial biogeochemistry and carbon-climate feedbacks. However, terrestrial biogeochemical models differ in their representations of plant root nutrient acquisition, leading to significantly different, and uncertain, carbon cycle and future climate projections. Here we first review biogeochemical principles and observations relevant to three essential plant root nutrient acquisition mechanisms: activity of nutrient acquiring proteins, maintenance of nutrient stoichiometry, and energy expenditure for these processes. We next examine how these mechanisms are considered in three existing modeling paradigms, and conclude by recommending the capacity-based approach, the need for observations, and necessary modeling developments of plant root nutrient acquisition to improve carbon-climate feedback projections.

59 BASIC BIOLOGICAL SCIENCES↗

Aluminum Ion Beam Treatment of Zirconium Ceramics

The paper presents the radiation and thermal treatment of zirconium ceramics with high-energy Al ion beams generated at an accelerating voltage of 1.5 kV, which modifies the structure and electrophysical properties of zirconium ceramics. Compact powder and ceramic samples are used for the radiation and thermal treatment performed at 1123–1173 K. The surface treatment of compact powders leads to the increase in the grain size, whereas the surface of ceramic samples turns black and electrically conductive in depth. This is because the change in the oxygen stoichiometry of zirconium ceramics. Air annealing of treated ceramics returns the sample to the initial state. The phase composition, microhardness and density of ceramic samples display no changes after the radiation and thermal treatment. Under the experimental conditions, the diffusion of aluminum ions in the surface layer is not observed. It is found that the ion beam treatment leads to the decrease in aluminum-containing impurity in the surface layers of zirconium ceramics.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Microstructure and Properties of Fe{sub 3}Al-Fe{sub 3}AlC{sub x} Composite Prepared by Reactive Liquid Processing

A Fe{sub 3}Al-Fe{sub 3}AlC{sub x} composite was prepared using reactive liquid processing (RLP) through controlled mixture of carbon steel and aluminum in the liquid state. The microstructure and phases of the composite were assessed using X-ray diffraction, scanning electron microscopy, energy-dispersive X-ray spectroscopy, optical microscopy, and differential scanning calorimetry. In addition, the density, hardness, microhardness, and elastic modulus were evaluated. The Fe{sub 3}Al-Fe{sub 3}AlC{sub x} composite consisted of 65 vol pct Fe{sub 3}Al and 35 vol pct Fe{sub 3}AlC{sub x} (κ). The κ phase contained 10.62 at. pct C, resulting in the stoichiometry Fe{sub 3}AlC{sub 0.475}. The elastic modulus of the Fe{sub 3}Al-Fe{sub 3}AlC{sub 0.475} composite followed the rule of mixtures. The RLP technique was shown to be capable of producing Fe{sub 3}Al-Fe{sub 3}AlC{sub 0.475} with a microstructure and properties similar to those achieved using other processing techniques reported in the literature.

36 MATERIALS SCIENCE↗

Influence of Aluminum-Carbon Composite Pellets on FeO Reduction and Iron Recovery from Electric Arc Furnace Slag

We investigated the effect of Al-C composite pellets (ACCP) on the reduction behavior of FeO in electric arc furnace (EAF) slag and the iron recovery at different n{sub Al}/(n{sub Al} + n{sub C}) at 1823 K (1550 °C). A carbothermic reaction was the dominant process at n{sub Al}/(n{sub Al} + n{sub C}) < 0.4, whereas aluminothermic reduction was the major process at n{sub Al}/(n{sub Al} + n{sub C}) > 0.6; these observations are based on the final content of FeO and Al{sub 2}O{sub 3} in the molten slag. The aluminum and carbon present in the ACCP competitively affected the reaction stoichiometry (i.e., the material balance) between the production of CO + Al{sub 2}O{sub 3} and the consumption of FeO. Iron recovery increased up to a yield of approx. 90 pct as the n{sub Al}/(n{sub Al} + n{sub C}) ratio increased. Because Al in the ACCP readily reacts to reduce FeO in the molten slag, iron recovery is proportional to the n{sub Al}/(n{sub Al} + n{sub C}) ratio. The precipitation of solid compounds in the slag phase, such as monoxide ([Mg,Fe]·O) and spinel (MgO·Al{sub 2}O{sub 3}), occurred during FeO reduction; this was experimentally confirmed as well as by thermochemical computation. Furthermore, we proposed a schematic reaction mechanism in the present study.

36 MATERIALS SCIENCE↗

Estimating the Efficiency of Phosphopeptide Identification by Tandem Mass Spectrometry

Mass spectrometry has played a significant role in the identification of unknown phosphoproteins and sites of phosphorylation in biological samples. Analyses of protein phosphorylation, particularly large scale phosphoproteomic experiments, have recently been enhanced by efficient enrichment, fast and accurate instrumentation, and better software, but challenges remain because of the low stoichiometry of phosphorylation and poor phosphopeptide ionization efficiency and fragmentation due to neutral loss. Phosphoproteomics has become an important dimension in systems biology studies, and it is essential to have efficient analytical tools to cover a broad range of signaling events. To evaluate current mass spectrometric performance, we present here a novel method to estimate the efficiency of phosphopeptide identification by tandem mass spectrometry. Phosphopeptides were directly isolated from whole plant cell extracts, dephosphorylated, and then incubated with one of three purified kinases—casein kinase II, mitogen-activated protein kinase 6, and SNF-related protein kinase 2.6—along with {sup 16}O{sub 4}- and {sup 18}O{sub 4}-ATP separately for in vitro kinase reactions. Phosphopeptides were enriched and analyzed by LC-MS. The phosphopeptide identification rate was estimated by comparing phosphopeptides identified by tandem mass spectrometry with phosphopeptide pairs generated by stable isotope labeled kinase reactions. Overall, we found that current high speed and high accuracy mass spectrometers can only identify 20%–40% of total phosphopeptides primarily due to relatively poor fragmentation, additional modifications, and low abundance, highlighting the urgent need for continuous efforts to improve phosphopeptide identification efficiency. .

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Extracting Charge and Mass Information from Highly Congested Mass Spectra Using Fourier-Domain Harmonics

Native mass spectra of large, polydisperse biomolecules with repeated subunits, such as lipoprotein Nanodiscs, can often be challenging to analyze by conventional methods. The presence of tens of closely spaced, overlapping peaks in these mass spectra can make charge state, total mass, or subunit mass determinations difficult to measure by traditional methods. Recently, we introduced a Fourier Transform-based algorithm that can be used to deconvolve highly congested mass spectra for polydisperse ion populations with repeated subunits and facilitate identification of the charge states, subunit mass, charge-state-specific, and total mass distributions present in the ion population. Here, we extend this method by investigating the advantages of using overtone peaks in the Fourier spectrum, particularly for mass spectra with low signal-to-noise and poor resolution. This method is illustrated for lipoprotein Nanodisc mass spectra acquired on three common platforms, including the first reported native mass spectrum of empty “large” Nanodiscs assembled with MSP1E3D1 and over 300 noncovalently associated lipids. It is shown that overtone peaks contain nearly identical stoichiometry and charge state information to fundamental peaks but can be significantly better resolved, resulting in more reliable reconstruction of charge-state-specific mass spectra and peak width characterization. We further demonstrate how these parameters can be used to improve results from Bayesian spectral fitting algorithms, such as UniDec. .

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Screening of the Suzuki Cross-Coupling Reaction Using Desorption Electrospray Ionization in High-Throughput and in Leidenfrost Droplet Experiments

Suzuki cross-coupling is a widely performed reaction, typically using metal catalysts under heated conditions. Acceleration of the Suzuki cross-coupling reaction has been previously explored in microdroplets using desorption electrospray ionization mass spectrometry (DESI-MS). Building upon previous work, presented here is the use of a high-throughput DESI-MS screening system to identify optimal reaction conditions. Multiple reagents, bases, and stoichiometries were screened using the automated system at rates that approach 10,000 reaction mixture systems per hour. The DESI-MS system utilizes reaction acceleration in microdroplets to allow rapid screening. The results of screening of an array of reaction mixtures using this technique are presented as product ion images via standard MS imaging software, facilitating quick readout. Instructive comparisons are provided with another method of generating droplets for reaction acceleration—the Leidenfrost technique. Acceleration factors greater than 200 were measured for brominated substrates, paralleling the DESI-MS results. Acceleration factors dropped to near unity with highly substituted pyridines, attributable to a steric effect. The reaction proceeded in the absence of a base in Leidenfrost droplets although no product formation was seen without base in the bulk or in the DESI-MS screening experiments. These differences between Leidenfrost chemistry and the bulk and in droplets formed in high-throughput DESI are tentatively attributed to extremes of pH associated with the surfaces of Leidenfrost droplets. .

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Identification and characterization of a novel calmodulin binding site in Drosophila TRP C-terminus

Highlights: • Drosophila TRP 783–862 is a novel calmodulin binding site. • The shortest Ca{sup 2+}-CaM interaction region and core CaM binding sequences in TRP 783–862 were dissected. • Ca{sup 2+}-CaM binding induces helical structure formation of Drosophila TRP 783–862. Transient receptor potential (TRP) channels are a group of essential cation channels involved in many important sensory signal transduction processes, such as light, temperature, tastes and pressure sensing. Drosophila TRP channel is the first discovered family member and plays important roles in photo-transduction in Drosophila. Calmodulin (CaM), an important downstream effector of Ca{sup 2+} signal, was considered as a vital regulator of TRP activities. In this study, we discovered a novel Ca{sup 2+} dependent CaM binding site (TRP 783–862) in between the previously reported two calmodulin binding sites (CBSs). The isothermal titration calorimetry (ITC) and the size exclusion chromatography coupled with multi-angle static light scattering (SEC-MALS) results showed that the dissociation constant (Kd) between TRP 783–862 and Ca{sup 2+}-CaM is 0.10 ± 0.04 μM and their binding stoichiometry is 1:1. In addition, the shortest Ca{sup 2+}-CaM interaction region and core CaM binding sequences in TRP 783–862 were dissected by the boundary mapping and mutagenesis experiments. More interestingly, by comparing the circular dichroism (CD) spectra before and after Ca{sup 2+}-CaM binding, the TRP 783–862 fragment showed Ca{sup 2+}-CaM binding dependent secondary structure changes, indicating that the interaction between CaM and Drosophila TRP channel may have a conformational impact on TRP structure. In summary, by identifying and characterizing a novel CaM binding site in TRP C-terminus, our findings provided a biochemical and structural basis for further in vivo functional studies of Ca{sup 2+}-mediated TRP channel regulation through CaM/TRP interaction.

60 APPLIED LIFE SCIENCES↗