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At least 613 records · Page 34

Solving inversion problems with neural networks

A class of inverse problems in remote sensing can be characterized by Q = F(x), where F is a nonlinear and noninvertible (or hard to invert) operator, and the objective is to infer the unknowns, x, from the observed quantities, Q. Since the number of observations is usually greater than the number of unknowns, these problems are formulated as optimization problems, which can be solved by a variety of techniques. The feasibility of neural networks for solving such problems is presently investigated. As an example, the problem of finding the atmospheric ozone profile from measured ultraviolet radiances is studied.

Kamgar-Parsi, Behzad↗

Using Neural Networks to Explore Air Traffic Controller Workload

When a new system, concept, or tool is proposed in the aviation domain, one concern is the impact that this will have on operator workload. As an experience, workload is difficult to measure in a way that will allow comparison of proposed systems with those already in existence. Chatterji and Sridhar (2001) suggested a method by which airspace parameters can be translated into workload ratings, using a neural network. This approach was employed, and modified to accept input from a non-real time airspace simulation model. The following sections describe the preparations and testing work that will enable comparison of a future airspace concept with a current day baseline in terms of workload levels.

Martin, Lynne↗

AladynPi – Adaptive Neural Network Molecular Dynamics Simulation Code with Physically Informed Potential: Computational Materials Mini-Application

This report provides an overview and description of commands used in the Computational Materials mini-application, AladynPi. AladynPi is an extension of a previously released mini-application, Aladyn (https://github.com/nasa/aladyn; Yamakov, V.I., and Glaessgen, E.H., NASA/TM-2018-220104). Aladyn and AladynPi are basic molecular dynamics codes written in FORTRAN 2003, which are designed to demonstrate the use of adaptive neural networks (ANNs) in atomistic simulations. The role of ANNs is to efficiently reproduce the very complex energy landscape resulting from the atomic interactions in materials with the accuracy of the more expensive quantum mechanics-based calculations. The ANN is trained on a large set of atomic structures calculated using the density functional theory method. An input for the ANN is a set of structure coefficients, characterizing the local atomic environment of each atom, for which the atomic energy is obtained in the ANN inference process. In Aladyn, the ANN gives directly the energy of interatomic interactions. In AladynPi, the ANN gives optimized parameters for a predefined empirical function, known as bond-order-potential (BOP). The parameterized BOP function is then used to calculate the energy. AladynPi code is being released to serve as a training testbed for students and professors in academia to explore possible optimization algorithms for parallel computing on multicore central processing unit (CPU) computers or computers utilizing manycore architectures based on graphic processing units (GPUs). The effort is supported by the High Performance Computing incubator (HPCi) project at NASA Langley Research Center.

Yamakov, Vesselin I.↗

Convolutional Neural Networks for Image Classification in Metal Selective Laser Meting Additive Manufacturing

Selective laser melting (SLM) is a metal additive manufacturing process that has several advantages such as the large range of metal materials that can be accommodated, 3D printing of complex shape components, the ability to adjust material properties, and cost reduction as expensive production equipment may not be required. Therefore, process monitoring is crucial in different stages of the component building. In this work, convolutional neural networks (CNNs) are investigated as a suitable technique for post-inspection of builds. The monitoring of manufactured parts was conducted by collecting computed tomography (CT) images and identifying defects. Five CNN models were implemented and tested for the classification of the CT images. The models were based on NASNetMobile and DenseNet121, and a custom built CNN model. The results of this work show that CNNs can be feasible and reliable for rapid monitoring and classification of defects in CT images from build fabrication using SLM.

Rodolfo Ledesma↗

A failure diagnosis system based on a neural network classifier for the space shuttle main engine

A conceptual design of a model based failure detection and diagnosis system is developed for the space shuttle main engine. This design relies on the accurate and reliable identification of the parameters of the highly nonlinear and very complex engine. The design approach is presented in some detail and results for a failed valve are presented. These preliminary results verify that the developed parameter identification technique together with a neural network classifier can be used for this purpose.

Duyar, Ahmet↗

A failure diagnosis system based on a neural network classifier for the Space Shuttle Main Engine

A conceptual design of a model based failure deeteection and diagnosis system is deeveloped for the Space Shuttle Main Engine. This design relies on the accurate and reliable identification of the parameters of the highly nonlinear and very complex engine. The design approach is presented in some detail and results for a failed valve are presented. These preliminary results verify that the developed parameter identification technique, together with a neural network classifier, can be used for this purpose.

Duyar, Ahmet↗

Towards Explainability of UAV-Based Convolutional Neural Networks for Object Classification

f autonomous systems using trust and trustworthiness is the focus of Autonomy Teaming and TRAjectories for Complex Trusted Operational Reliability (ATTRACTOR), a new NASA Convergent Aeronautical Solutions (CAS) Project. One critical research element of ATTRACTOR is explainability of the decision-making across relevant subsystems of an autonomous system. The ability to explain why an autonomous system makes a decision is needed to establish a basis of trustworthiness to safely complete a mission. Convolutional Neural Networks (CNNs) are popular visual object classifiers that have achieved high levels of classification performances without clear insight into the mechanisms of the internal layers and features. To explore the explainability of the internal components of CNNs, we reviewed three feature visualization methods in a layer-by-layer approach using aviation related images as inputs. Our approach to this is to analyze the key components of a classification event in order to generate component labels for features of the classified image at different layers of depths. For example, an airplane has wings, engines, and landing gear. These could possibly be identified somewhere in the hidden layers from the classification and these descriptive labels could be provided to a human or machine teammate while conducting a shared mission and to engender trust. Each descriptive feature may also be decomposed to a combination of primitives such as shapes and lines. We expect that knowing the combination of shapes and parts that create a classification will enable trust in the system and insight into creating better structures for the CNN.

Dolph, Chester V.↗

A Neural Network Parametrization of Volumetric Cloud Fraction Profiles Using Satellite Observations and MERRA-2 Reanalysis Meteorological Data

Clouds play a crucial role in regulating the hydrologic cycle and Earth's radiative energy budget, yet they are often poorly represented in global climate models (GCMs). This study applies deep machine learning techniques to develop a physical parameterization of volumetric cloud fraction (VCF), the fraction of a 3-D grid volume occupied by clouds using satellite lidar-radar measurements. The neural network (NN) captures the complicated relationships between observed VCF profiles and collocated meteorological variables from MERRA-2 reanalysis data. Our results show that the NN model, particularly a sequence-to-sequence long short-term memory (LSTM) network with a sixfactor loss function, effectively learns the underlying cloud physical processes. The NN model outperforms MERRA-2 reanalysis in representing low-level clouds in tropical and subtropical regions and low- and middle-level clouds over midlatitude storm-track regions, and also improves VCF histograms. These improvements are reflected in the vertical distributions of zonally, meridionally, and globally averaged VCFs, geographic distributions of low-, middle-, and high-level clouds, and seasonal variations in monthly-mean VCF. Furthermore, the NN predictions effectively capture the El Niño-Southern Oscillation (ENSO) effects and other interannual variations. The NN parameterization is further evaluated through a sensitivity analysis, in which a single predictor is perturbed at a time. This reveals that relative humidity (RH) is the dominant factor influencing variations in globally averaged VCF at low and middle altitudes, followed by temperature. At higher altitudes, temperature becomes the primary driver of VCF through its effect on RH. Changes in wind components had minimal impact on globally averaged VCF.

Shan Zeng↗

A Global Spatially Contiguous Solar-Induced Fluorescence (CSIF) Dataset Using Neural Networks

Satellite-retrieved solar-induced chlorophyll fluorescence (SIF) has shown great potential to monitor the photosynthetic activity of terrestrial ecosystems. However, several issues, including low spatial and temporal resolution of the gridded datasets and high uncertainty of the individual retrievals, limit the applications of SIF. In addition, inconsistency in measurement footprints also hinders the direct comparison between gross primary production (GPP) from eddy covariance (EC) flux towers and satellite-retrieved SIF. In this study, by training a neural network (NN) with surface reflectance from the MODerate-resolution Imaging Spectroradiometer (MODIS) and SIF from Orbiting Carbon Observatory-2 (OCO-2), we generated two global spatially contiguous SIF (CSIF) datasets at moderate spatiotemporal (0.05° 4-day) resolutions during the MODIS era, one for clear-sky conditions (2000–2017) and the other one in all-sky conditions (2000–2016). The clear-sky instantaneous CSIF (CSIF(sub clear-inst)) shows high accuracy against the clear-sky OCO-2 SIF and little bias across biome types. The all-sky daily average CSIF (CSIF(sub all-daily)) dataset exhibits strong spatial, seasonal and interannual dynamics that are consistent with daily SIF from OCO-2 and the Global Ozone Monitoring Experiment-2 (GOME-2). An increasing trend (0.39 %) of annual average CSIFall-daily is also found, confirming the greening of Earth in most regions. Since the difference between satellite-observed SIF and CSIF is mostly caused by the environmental down-regulation on SIF(sub yield), the ratio between OCO-2 SIF and CSIF(sub clear-inst) can be an effective indicator of drought stress that is more sensitive than the normalized difference vegetation index and enhanced vegetation index. By comparing CSIF(sub all-daily) with GPP estimates from 40 EC flux towers across the globe, we find a large cross-site variation (c.v. = 0.36) of the GPP–SIF relationship with the highest regression slopes for evergreen needleleaf forest. However, the cross-biome variation is relatively limited (c.v. = 0.15). These two contiguous SIF datasets and the derived GPP–SIF relationship enable a better understanding of the spatial and temporal variations of the GPP across biomes and climate.

Zhang, Yao↗

Sea Surface Salinity Retrievals from Aquarius Using Neural Networks

Even though the Sea Surface Salinity (SSS) retrieved from Aquarius are generally very close to in-situ measurements, the level of similarity varies with the region and with the circumstances of the observations (wind speed, sea surface temperature, etc.). SSS is currently retrieved from the brightness temperatures measured by Aquarius and applying the current theoretical model for the propagation and emission of the natural thermal radiation. In this contribution we consider an alternative retrieval approach based on a Neural Network (NN) with the goal of improving the subsets of Aquarius SSS data that are in poorer agreement within-situ measurements. The subset considered here are the SSS retrieved at latitudes higher than 30 ̊. The output of the NN approach are compared against in-situ measurements using four statistical metrics (correlation coefficient, bias, RMSD and 5% trimmed range). The output of the NN and the nominal Aquarius SSS are compared against SSS values from in-situ measurements and from ocean models. From these comparisons it appears that the output of the NN matches the in-situ measurements better than the nominal Aquarius SSS.

Soldo, Yan↗

Advantages of Measuring the Q Stokes Parameter in Addition to the Total Radiance I in the Detection of Absorbing Aerosols: a Proof of Concept Using Vector Radiative Transfer, Neural Networks, and Optimal Estimation

A simple but novel study was conducted to investigate whether an imager-type spectroradiometer instrument like MODIS, currently flying on board the Aqua and Terra satellites, or MERIS, which flew on board Envisat, could detect absorbing aerosols if they could measure the Q Stokes parameter in addition to the total radiance I, that is if they could also measure the linear polarization of the light. Accurate radiative transfer calculations were used to train a fast neural network forward model, which together with a simple statistical optimal estimation scheme was used to retrieve three aerosol parameters: aerosol optical depth, fraction of absorbing aerosols, and aerosol location. The aerosols were assumed to be located either between 0 and 2 km or between 2 and 4 km in the Earth’s atmosphere. From simulated data it was found that by itself the total radiance I was generally insufficient to retrieve all three aerosol parameters, but that together with the Q Stokes component it was possible to reliably retrieve values of aerosol optical depth, fraction, and location.

Stamnes, Snorre↗

New Neural Network Cloud Mask Algorithm Based on Radiative Transfer Simulations

Cloud detection and screening constitute critically important first steps required to derive many satellite data products. Traditional threshold-based cloud mask algorithms require a complicated design process and fine tuning for each sensor, and they have difficulties over areas partially covered with snow/ice. Exploiting advances in machine learning techniques and radiative transfer modeling of coupled environmental systems, we have developed a new, threshold-free cloud mask algorithm based on a neural network classifier driven by extensive radiative transfer simulations. Statistical validation results obtained by using collocated CALIOP and MODIS data show that its performance is consistent over different ecosystems and significantly better than the MODIS Cloud Mask (MOD35 C6) during the winter seasons over snow-covered areas in the mid-latitudes. Simulations using a reduced number of satellite channels also show satisfactory results, indicating its flexibility to be configured for different sensors. Comparedto threshold-based methods and previous machine-learning approaches, this new cloud mask (i) does not rely on thresholds, (ii) needs fewer satellite channels, (iii) has superior performance during winter seasons in mid-latitude areas, and (iv) can easily be applied to different sensors.

cloud mask algorithms↗

An Ensemble of Bayesian Neural Networks for Exoplanetary Atmospheric Retrieval

Machine learning (ML) is now used in many areas of astrophysics, from detecting exoplanets in Kepler transit signals to removing telescope systematics. Recent work demonstrated the potential of using ML algorithms for atmospheric retrieval by implementing a random forest (RF) to perform retrievals in seconds that are consistent with the traditional, computationally expensive nested-sampling retrieval method. We expand upon their approach by presenting a new ML model, plan-net, based on an ensemble of Bayesian neural networks (BNNs) that yields more accurate inferences than the RF for the same data set of synthetic transmission spectra. We demonstrate that an ensemble provides greater accuracy and more robust uncertainties than a single model. In addition to being the first to use BNNs for atmospheric retrieval, we also introduce a new loss function for BNNs that learns correlations between the model outputs. Importantly, we show that designing ML models to explicitly incorporate domain-specific knowledge both improves performance and provides additional insight by inferring the covariance of the retrieved atmospheric parameters. We apply plan-net to the Hubble Space Telescope Wide Field Camera 3 transmission spectrum for WASP-12b and retrieve an isothermal temperature and water abundance consistent with the literature. We highlight that our method is flexible and can be expanded to higher resolution spectra and a larger number of atmospheric parameters.

Adam D. Cobb↗

A Convolutional Neural Network for Removing GOES-17 Image Anomalies to Improve CERES Broadband Flux Measurement

Background - CERES provides satellite-based global climate data record of Earth's radiation budget and clouds - CERES = Clouds and the Earth's Radiant Energy System - Measurement anomalies impact cloud retrieval - Incorrect Cloud Phase = Incorrect Flux - Unmitigated bad scanlines will impact climate data records - GOES-17 ABI cooling system anomaly = many bad scanlines at night (~10:30 - 16:30 UTC) - Cleaning imagery of bad scanlines is laborious but necessary - A convolution neural network (CNN) can identify and clean bad scanlines as effectively as a human

Benjamin Scarino↗

Objectively Identifying Transverse Cirrus Bands in Tropical Cyclones using a Convolutional Neural Network

Transverse cirrus bands (TCBs) are bands of upper-level clouds that are regularly seen in mesoscale and synoptic-scale weather systems. In tropical cyclones, their appearance has been subjectively linked to intensification and the diurnal cycle, but these hypothesized relationships have not been rigorously tested due to the difficulty of objectively identifying TCBs in satellite images. This presentation describes a machine learning technique that successfully identifies TCBs in imagery from the GOES-16 Advanced Baseline Imager. The technique uses a convolutional neural network (CNN) that assigns a probability of each pixel in the image being associated with a TCB. Using the CNN, a database of TCBs from 2018 to 2022 was developed for the Atlantic basin. Statistics using this database will be presented, including the relationship between TCBs and deep-layer vertical wind shear, intensity change, and the TC diurnal cycle.

John Mark Mayhall↗

Objectively Identifying Transverse Cirrus Bands in Tropical Cyclones using a Convolutional Neural Network

Transverse cirrus bands (TCBs) are bands of upper-level clouds regularly seen in mesoscale and synoptic-scale weather systems. In tropical cyclones, their appearance has been subjectively linked to intensification and the diurnal cycle. However, these hypothesized relationships have not been rigorously tested due to the subjective nature of TCBs in satellite images. A machine learning technique that successfully identifies TCBs objectively in imagery from the GOES-16 Advanced Baseline Imager (ABI) has been developed to solve this problem. The technique uses a U-Net convolutional neural network (CNN) that assigns a probability to each pixel in an image based on the likelihood of the pixel being associated with a TCB. Using the U-Net CNN, a database of TCBs from 2019 to 2022 was developed for the Atlantic tropical cyclone basin by defining an appropriate probability threshold that defines the difference between TCB and non-TCB pixels. This threshold is where the Jaccard score, calculated using manually identified TCBs and model identified TCBs, is maximized. Statistics for TCB occurrence will also be presented, including the relationships between TCBs and storm relative motion, shear relative direction, cardinal direction, tropical cyclone intensity, tropical cyclone intensification rates, and time of day.

John Mark Mayhall↗

A Neural Network Approach to Infer Optical Depth of Thick Ice Clouds at Night

One of the roadblocks to continuously monitoring cloud properties is the tendency of clouds to become optically black at cloud optical depths (COD) of 6 or less. This constraint dramatically reduces the quantitative information content at night. A recent study found that because of their diffuse nature, ice clouds remain optically gray, to some extent, up to COD of 100 at certain wavelengths. Taking advantage of this weak dependency and the availability of COD retrievals from CloudSat, an artificial neural network algorithm was developed to estimate COD values up to 70 from common satellite imager infrared channels. The method was trained using matched 2007 CloudSat and Aqua MODIS data and is tested using similar data from 2008. The results show a significant improvement over the use of default values at night with high correlation. This paper summarizes the results and suggests paths for future improvement.

Minnis, P.↗

Predicting the Functional State of Protein Kinases Using Interpretable Graph Neural Networks

Kinases are a family of proteins that function as molecular switches, regulating several essential cellular activities such as cell proliferation. Dysfunctional kinases are implicated in several types of cancers and hence they are actively pursued as drug targets. Given the vast number of complex kinase structures that are available in the protein data bank (PDB), there is a necessity to develop methodologies that can identify structurally important moieties of the kinases in an automated fashion, for such techniques can be instrumental in identifying novel drug targets. In this work, we develop a graph neural network (GNN) based deep learning framework for classifying the functionally active and inactive states of a large set of eukaryotic protein kinases, making use of their 3D structure from the PDB. We show that GNN based machine learning models can classify protein states with an accuracy greater than 97%. We further use the GNN models to automatically identify regions of the kinases that are important for its function. For this purpose, Gradient-weighted Class Activation Mapping (Grad-CAM) was implemented on the protein graphs. Remarkably, Grad-CAM consistently identifies the highly conserved DFG motif as the most important part of the protein across the entire kinome, without any prior input. Other regions of the hydrophobic core such as the HRD motif were also identified by the interpretable GNN framework, consistent with the literature. We discuss the significance of each of these regions in detail.

Ashwin Ravichandran↗