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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 613 records · Page 34
All sourcesNASA NTRSDOE OSTI
DOE OSTI2023

An ecologically-constrained deep learning model for tropical leaf phenology monitoring using PlanetScope satellites

In tropical forests, leaf phenology signals leaf-on/off status and exhibits considerable variability across scales from a single tree-crown to the entire forest ecosystem. Such phenology signals importantly regulate large-scale biogeochemical cycles and regional climate. PlanetScope CubeSats data with a 3-m resolution and near-daily global coverage provide an unprecedented opportunity to monitor both fine- and ecosystem-scale phenology variability along large environmental gradients. However, a scalable method that accurately characterizes leaf phenology from PlanetScope with biophysically meaningful metrics remains lacking. Here we developed an index-guided, ecologically constrained autoencoder (IG-ECAE) method to automatically derive a deciduousness metric (i.e. percentage of tree canopies with leaf-off status within an image pixel) from PlanetScope. The IG-ECAE first estimated the reflectance spectra of leafy/leafless canopies based on their spectral indices characteristics, then used the derived reflectance spectra to guide an autoencoder deep learning method with additional ecological constraints to refine the reflectance spectra, and finally used linear spectral unmixing to estimate the relative abundance of leafless canopies (or deciduousness) per PlanetScope image pixel. We tested the IG-ECAE method at 16 tropical forest sites spanning multiple continents and a large precipitation gradient (1470-2819 mm year -1 ). Among these sites, we evaluated the PlanetScope-derived deciduousness with corresponding measures derived from WorldView-2 (n=9 sites) and local phenocams (n=9 sites). Our results show that PlanetScope-derived deciduousness agrees: 1) with that derived from WorldView-2 at the patch level (90m×90m) with r 2 =0.89 across all sites; and 2) with that derived from phenocams to quantify ecosystem-scale seasonality with r 2 ranging from 0.62-0.96. These results demonstrate the effectiveness and scalability of IG-ECAE in characterizing the wide variability in deciduousness across scales from pixels to forest ecosystems, and from a single date to the full annual cycle, indicating the potential for using high-resolution satellites to track the large-scale phenological patterns and response of tropical forests to climate change.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

Training Ultrasound Image Classification Deep-Learning Algorithms for Pneumothorax Detection Using a Synthetic Tissue Phantom Apparatus

Ultrasound (US) imaging is a critical tool in emergency and military medicine because of its portability and immediate nature. However, proper image interpretation requires skill, limiting its utility in remote applications for conditions such as pneumothorax (PTX) which requires rapid intervention. Artificial intelligence has the potential to automate ultrasound image analysis for various pathophysiological conditions. Training models require large data sets and a means of troubleshooting in real-time for ultrasound integration deployment, and they also require large animal models or clinical testing. Here, we detail the development of a dynamic synthetic tissue phantom model for PTX and its use in training image classification algorithms. The model comprises a synthetic gelatin phantom cast in a custom 3D-printed rib mold and a lung mimicking phantom. When compared to PTX images acquired in swine, images from the phantom were similar in both PTX negative and positive mimicking scenarios. We then used a deep learning image classification algorithm, which we previously developed for shrapnel detection, to accurately predict the presence of PTX in swine images by only training on phantom image sets, highlighting the utility for a tissue phantom for AI applications.

Boice, Emily N. (ORCID:0000000171802842)↗
NASA NTRSDate not supplied

Developing Deep Learning Models for System Remaining Useful Life Predictions: Application to Aircraft Engines

Prognostics and health management (PHM) is an important part of ensuring reliable operations of complex safety- critical systems. System-level remaining useful life (RUL) estimation is a much more complex problem than making estimations at the component level, and system-level RUL methodologies remain sparse in the literature. Model-based approaches have traditionally worked in the past for components such as capacitors, MOSFETs, batteries, or hard-drives (to name a few examples), but developing high fidelity dynamics models of cyber physical systems that can be used to study the effects of multiple degrading components in the system remains a challenging task. Some initial work on model-based System RUL predictions was demonstrated in Khorasgani, et al [1], but, to generalize the system-level prognostics problem, we have to resort to pure data driven and hybrid approaches. In this work, we propose an end-to-end data- driven framework for developing deep learning models to predict remaining useful life of cyber physical systems operating under unknown faulty conditions. The raw data is organized with a data schema that improves the model development process and down stream data analysis tasks. Due to the unknown faulty conditions, the raw sensor data is transformed into signals that expose the underlying degradation processes, which are then used for model development. Bayesian Optimization is used to tune the model parameters prior to training and validation. We show that this approach results in accurate predictions within 3 cycles to end of life (EOL). We demonstrate the effectiveness of our approach by applying it to the N-CMAPSS turbofan engine dataset recently released by NASA, which includes high fidelity degradation modeling, real world operating conditions, and a large set of fault operating modes.

Prognostics↗
DOE OSTI2023

Deep learning assisted jet tomography for the study of Mach cones in QGP

Abstract Mach cones are expected to form in the expanding quark-gluon plasma (QGP) when energetic quarks and gluons traverse the hot medium at a velocity faster than the speed of sound in high-energy heavy-ion collisions. The shape of the Mach cone and the associated diffusion wake are sensitive to the initial jet production location and the propagation direction of the parton shower relative to the radial flow because of the distortion caused by the collective expansion of the QGP and the large density gradient. The shape of jet-induced Mach cones and their distortions in heavy-ion collisions provide a unique and direct probe of the dynamical evolution and the equation of state of QGP. However, it is difficult to identify the Mach cone and the diffusion wake in current experimental measurements of final hadron distributions because they are averaged over all possible initial jet production locations and parton-shower propagation directions. To overcome this difficulty, we develop a deep learning assisted jet tomography which uses the full information of the final hadrons from jets to localize the initial jet production positions. This method can help to constrain the initial regions of jet production in heavy-ion collisions and enable a differential study of Mach-cones with different path lengths and orientations relative to the radial flow of the QGP in heavy-ion collisions.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2021

Uncertainty quantification for deep learning in particle accelerator applications

With the advent of increased computational resources and improved algorithms, machine learning-based models are being increasingly applied to complex problems in particle accelerators. However, such data-driven models may provide overly confident predictions with unknown errors and uncertainties. For reliable deployment of machine learning models in high-regret and safety-critical systems such as particle accelerators, estimates of prediction uncertainty are needed along with accurate point predictions. In this investigation, we evaluate Bayesian neural networks (BNN) as an approach that can provide accurate predictions along with reliably quantified uncertainties for particle accelerator problems, and compare their performance with bootstrapped ensembles of neural networks. We select three accelerator setups for this evaluation: a storage ring, a photoinjector, and a linac. The problems span different data volumes and dimensionalities (e.g., scalar predictions as well as image outputs). It is found that BNN provide accurate predictions of the mean along with reliable estimates of predictive uncertainty across the test cases. In this vein, BNN may offer an attractive alternative to deterministic deep learning tools to generate accurate predictions with quantified uncertainties in particle accelerator applications.

43 PARTICLE ACCELERATORS↗
DOE OSTI2022

Super-resolution and segmentation deep learning for breast cancer histopathology image analysis

Traditionally, a high-performance microscope with a large numerical aperture is required to acquire high-resolution images. However, the images’ size is typically tremendous. Therefore, they are not conveniently managed and transferred across a computer network or stored in a limited computer storage system. As a result, image compression is commonly used to reduce image size resulting in poor image resolution. Here, we demonstrate custom convolution neural networks (CNNs) for both super-resolution image enhancement from low-resolution images and characterization of both cells and nuclei from hematoxylin and eosin (H&E) stained breast cancer histopathological images by using a combination of generator and discriminator networks so-called super-resolution generative adversarial network-based on aggregated residual transformation (SRGAN-ResNeXt) to facilitate cancer diagnosis in low resource settings. The results provide high enhancement in image quality where the peak signal-to-noise ratio and structural similarity of our network results are over 30 dB and 0.93, respectively. The derived performance is superior to the results obtained from both the bicubic interpolation and the well-known SRGAN deep-learning methods. In addition, another custom CNN is used to perform image segmentation from the generated high-resolution breast cancer images derived with our model with an average Intersection over Union of 0.869 and an average dice similarity coefficient of 0.893 for the H&E image segmentation results. Finally, we propose the jointly trained SRGAN-ResNeXt and Inception U-net Models, which applied the weights from the individually trained SRGAN-ResNeXt and inception U-net models as the pre-trained weights for transfer learning. The jointly trained model’s results are progressively improved and promising. We anticipate these custom CNNs can help resolve the inaccessibility of advanced microscopes or whole slide imaging (WSI) systems to acquire high-resolution images from low-performance microscopes located in remote-constraint settings.

60 APPLIED LIFE SCIENCES↗
NASA NTRS2020

Multi-Agent Motion Planning using Deep Learning for Space Applications

State-of-the-art motion planners cannot scale to a large number of systems. Motion planning for multiple agents is an NP (non-deterministic polynomial-time) hard problem, so the computation time increases exponentially with each addition of agents. This computational demand is a major stumbling block to the motion planner's application to future NASA missions involving the swarm of space vehicles. We applied a deep neural network to transform computationally demanding mathematical motion planning problems into deep learning-based numerical problems. We showed optimal motion trajectories can be accurately replicated using deep learning-based numerical models in several 2D and 3D systems with multiple agents. The deep learning-based numerical model demonstrates superior computational efficiency with plans generated 1000 times faster than the mathematical model counterpart.

Madani, Ramtin↗
NASA NTRSDate not supplied

Development of Physics-Based Transition Models for Unstructured-Mesh CFD Codes Using Deep Learning Models

Predicting transition locations over a vehicle surface is of fundamental importance for many engineering applications. With the transition information, the Reynolds-averaged Navier-Stokes (RANS) computations can turn on the turbulence model at the right locations so that drag, lift and other aerodynamic quantities can be accurately predicted. In contrast to the popularity of RANS-based transition modeling in which transition onset is governed by the turbulence equations, physics-based transition models that account for instability waves within the boundary layer, thus more compliant to flow physics, only gained more attention in recent years. This paper describes the development of a new physics-based transition model based on either the linear stability theory (LST) or parabolized stability equations (PSE). The model is designed to communicate with a structured or unstructured-mesh RANS solver back and forth in order to more accurately compute transition fronts over a three-dimensional body. In the developed model, the Python suite of interface codes in conjunction with the LASTRAC software can be executed autonomously to produce transition onset locations for a given laminar or RANS-computed transitional state. In addition, as a proof of concept, the tool set consists of a deep learning neural network model that has been designed and trained to predict instability wave evolutions inside the boundary layer for various instability wave mechanisms across a selected speed range. A machine-learned intelligent profile interpolation model has also been devised to enable reliable instability-wave spectra predictions with just a few points in the mean flow profiles.

Transition Modeling↗
NASA NTRS2019

Deep Learning Applications in Manned Spaceflight

This presentation discusses a basic overview of Deep Machine Learning (DML) fundamentals, and two JSC applications of DML to create an Intelligent Personal Coach for exercise applications on deep-space missions, and the training of a neural network using the SingleShotPose algorithm from Microsoft to detect object 6 degree of freedom pose information from 2D image data for use in an Intelligent Procedure Assistant. The presentation concludes with a discussion about conceptual future uses of DML for space missions.

augmented reality↗
NASA NTRS2019

Using Deep Learning to Automate Inference of Meteoroid Pre-Entry Properties

Properly assessing the asteroid threat depends on the knowledge of asteroid pre-entry parameters, such as size, velocity, mass, density, and strength. Although a vast number of possible bodies to study exist, such characterization of asteroid populations is currently limited by substantial costs associated with space rendezvous missions and rare meteorite findings. As asteroids fragment, ablate, and decelerate in the atmosphere, they emit light detectable by ground-based and space-borne instruments. Earth’s atmosphere, thus, becomes an accessible laboratory that enables impactor risk assessments by facilitating inference of the pre-entry parameters. These asteroid pre-entry conditions are typically deduced by modeling the entry and breakup physics that best reproduce the observed light or energy deposition curve. However, this process requires extensive manual trial-and-error of uncertain modeling parameters. Automating meteor modeling and inference would improve property distributions used in risk assessments and enable population characterization as more light curves become more readily available through the presence of space assets and ground-based camera networks. We previously developed a genetic algorithm to automate meteor modeling by using the fragment-cloud model (FCM) to search for the values of the FCM input parameters (e.g., diameter) that generate energy deposition profiles that match the observed one. Now, we apply deep learning to infer asteroid diameter, velocity, and density from observed energy deposition curves. We trained and tested our neural network models with synthetic energy deposition curves modeled using the FCM rubble pile implementation. We present an application of a 1D convolutional neural network and compare its performance to other attempted regressors and machine learning techniques, such as a fully connected neural network and Random Forest regression, to demonstrate its capabilities. We validate our model weights and approach using the Chelyabinsk, Tagish Lake, Benešov, Košice, and Lost City meteors.

Tarano, Ana Maria↗
DOE OSTI2025

Testing convolutional neural network based deep learning systems: a statistical metamorphic approach

Machine learning technology spans many areas and today plays a significant role in addressing a wide range of problems in critical domains,i.e., healthcare, autonomous driving, finance, manufacturing, cybersecurity,etc. Metamorphic testing (MT) is considered a simple but very powerful approach in testing such computationally complex systems for which either an oracle is not available or is available but difficult to apply. Conventional metamorphic testing techniques have certain limitations in verifying deep learning-based models (i.e., convolutional neural networks (CNNs)) that have a stochastic nature (because of randomly initializing the network weights) in their training. In this article, we attempt to address this problem by using a statistical metamorphic testing (SMT) technique that does not require software testers to worry about fixing the random seeds (to get deterministic results) to verify the metamorphic relations (MRs). We propose seven MRs combined with different statistical methods to statistically verify whether the program under test adheres to the relation(s) specified in the MR(s). We further use mutation testing techniques to show the usefulness of the proposed approach in the healthcare space and test two CNN-based deep learning models (used for pneumonia detection among patients). The empirical results show that our proposed approach uncovers 85.71% of the implementation faults in the classifiers under test (CUT). Furthermore, we also propose an MRs minimization algorithm for the CUT, thus saving computational costs and organizational testing resources.

Computer Science↗
DOE OSTI2023

Deep learning uncertainty quantification for clinical text classification

Machine learning algorithms are expected to work side-by-side with humans in decision-making pipelines. Thus, the ability of classifiers to make reliable decisions is of paramount importance. Deep neural networks (DNNs) represent the state-of-the-art models to address real-world classification. Although the strength of activation in DNNs is often correlated with the network’s confidence, in-depth analyses are needed to establish whether they are well calibrated. In this paper, we demonstrate the use of DNN-based classification tools to benefit cancer registries by automating information extraction of disease at diagnosis and at surgery from electronic text pathology reports from the US National Cancer Institute (NCI) Surveillance, Epidemiology, and End Results (SEER) population-based cancer registries. In particular, we introduce multiple methods for selective classification to achieve a target level of accuracy on multiple classification tasks while minimizing the rejection amount—that is, the number of electronic pathology reports for which the model’s predictions are unreliable. We evaluate the proposed methods by comparing our approach with the current in-house deep learning-based abstaining classifier. Overall, all the proposed selective classification methods effectively allow for achieving the targeted level of accuracy or higher in a trade-off analysis aimed to minimize the rejection rate. On in-distribution validation and holdout test data, with all the proposed methods, we achieve on all tasks the required target level of accuracy with a lower rejection rate than the deep abstaining classifier (DAC). Interpreting the results for the out-of-distribution test data is more complex; nevertheless, in this case as well, the rejection rate from the best among the proposed methods achieving 97% accuracy or higher is lower than the rejection rate based on the DAC. We show that although both approaches can flag those samples that should be manually reviewed and labeled by human annotators, the newly proposed methods retain a larger fraction and do so without retraining—thus offering a reduced computational cost compared with the in-house deep learning-based abstaining classifier.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2020

A Hybrid Deep Learning Approach to Cosmological Constraints from Galaxy Redshift Surveys

We present a deep machine learning (ML)–based technique for accurately determining σ g and Ω m from mock 3D galaxy surveys. The mock surveys are built from the AbacusCosmos suite of N -body simulations, which comprises 40 cosmological volume simulations spanning a range of cosmological parameter values, and we account for uncertainties in galaxy formation scenarios through the use of generalized halo occupation distributions (HODs). We explore a trio of ML models: a 3D convolutional neural network (CNN), a power spectrum–based fully connected network, and a hybrid approach that merges the two to combine physically motivated summary statistics with flexible CNNs. We describe best practices for training a deep model on a suite of matched-phase simulations, and we test our model on a completely independent sample that uses previously unseen initial conditions, cosmological parameters, and HOD parameters. Despite the fact that the mock observations are quite small (~0.07 h -3 Gpc 3 ) and the training data span a large parameter space (six cosmological and six HOD parameters), the CNN and hybrid CNN can constrain estimates of σ g and Ω m to ~3% and ~4%, respectively.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2020

The Case for Strong Scaling in Deep Learning: Training Large 3D CNNs with Hybrid Parallelism

Here, we present scalable hybrid-parallel algorithms for training large-scale 3D convolutional neural networks. Deep learning-based emerging scientific workflows often require model training with large, high-dimensional samples, which can make training much more costly and even infeasible due to excessive memory usage. We solve these challenges by extensively applying hybrid parallelism throughout the end-to-end training pipeline, including both computations and I/O. Our hybrid-parallel algorithm extends the standard data parallelism with spatial parallelism, which partitions a single sample in the spatial domain, realizing strong scaling beyond the mini-batch dimension with a larger aggregated memory capacity. We evaluate our proposed training algorithms with two challenging 3D CNNs, CosmoFlow and 3D U-Net. Our comprehensive performance studies show that good weak and strong scaling can be achieved for both networks using up to 2K GPUs. More importantly, we enable training of CosmoFlow with much larger samples than previously possible, realizing an order-of-magnitude improvement in prediction accuracy.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2021

Deep-Learning-Derived Evaluation Metrics Enable Effective Benchmarking of Computational Tools for Phosphopeptide Identification

Tandem mass spectrometry (MS/MS)-based phosphoproteomics is a powerful technology for global phosphorylation analysis. However, applying four computational pipelines to a typical mass spectrometry (MS)-based phosphoproteomic dataset from a human cancer study, we observed a large discrepancy among the reported phosphopeptide identification and phosphosite localization results, underscoring a critical need for benchmarking. While efforts have been made to compare performance of computational pipelines using data from synthetic phosphopeptides, evaluations involving real application data have been largely limited to comparing the numbers of phosphopeptide identifications due to the lack of appropriate evaluation metrics. We investigated three deep learning-derived features as potential evaluation metrics: phosphosite probability, Delta RT and spectral similarity. Predicted phosphosite probability is computed by MusiteDeep, which provides high accuracy as previously reported; Delta RT is defined as the absolute retention time (RT) difference between RTs observed and predicted by AutoRT; and spectral similarity is defined as the Pearson’s correlation coefficient between spectra observed and predicted by pDeep2. Using a synthetic peptide dataset, we found that both Delta RT and spectral similarity provided excellent discrimination between correct and incorrect peptide-spectrum matches (PSMs) both when incorrect PSMs involved wrong peptide sequences and even when incorrect PSMs were caused by only incorrect phosphosite localization. Based on these results, we used all the three deep learning-derived features as evaluation metrics to compare different computational pipelines on diverse set of phosphoproteomic datasets and showed their utility in benchmarking performance of the pipelines. The benchmark metrics demonstrated in this study will enable users to select computational pipelines and parameters for routine analysis of phosphoproteomics data and will offer guidance for developers to improve computational methods.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2024

Newton-Raphson AC Power Flow Convergence Based on Deep Learning Initialization and Homotopy Continuation

Power flow forms the basis of many power system studies. With the increased penetration of renewable energy, grid planners tend to perform multiple power flow simulations under various operating conditions and not just selected snapshots at peak or light load conditions. Getting a converged AC power flow (ACPF) case remains a significant challenge for grid planners especially in large power grid networks. This paper proposes a two-stage approach to improve Newton-Raphson ACPF convergence and was applied to a 6102 bus Electric Reliability Council of Texas (ERCOT) system. The first stage utilizes a deep learning-based initializer with data re-training. Here a deep neural network (DNN) initializer is developed to provide better initial voltage magnitude and angle guesses to aid in power flow convergence. This is because Newton-Raphson ACPF is quite sensitive to the initial conditions and bad initialization could lead to divergence. The DNN initializer includes a data re-training framework that improves the initializer's performance when faced with limited training data. The DNN initializer successfully solved 3,285 cases out of 3,899 non-converging dispatch and performed better than random forest and DC power flow initialization methods. ACPF cases not solved in this first stage are then passed through a hot-starting algorithm based on homotopy continuation with switched shunt control. The hot-starting algorithm successfully converged 416 cases out of the remaining 614 non-converging ACPF dispatch. In conclusion, the combined two-stage approach achieved a 94.9% success rate, by converging a total of 3,701 cases out of the initial 3,899 unsolved cases.

Deep learning↗
DOE OSTI2024

Automating the detection of hydrological barriers and fragmentation in wetlands using deep learning and InSAR

The loss of hydrological connectivity and fragmentation of natural wetlands is a widespread driver of wetland degradation. Understanding where and how natural connectivity is impaired is essential for managing, protecting and remediating these ecosystems. Wetland Interferometric Synthetic Aperture Radar (Wetland InSAR) can provide information on surface flow orientation in wetlands at a high spatial resolution, which can be used for barrier detection. However, the broad application of this approach is constrained by the labour-intensive manual delineation of barriers based on mapped water levels. This study presents the first deep learning-based methodology for the automated detection of hydrological barriers. We trained a deep convolutional network to segment edge features of hydrological barriers in 25 image pairs captured by ALOS PALSAR-1 L-Band InSAR between 2006 and 2011. The training dataset consists of manually labelled and delineated barriers showing abrupt changes in water surface elevation and wrapped interferograms with high coherence. We tested this method across three wetland sites: the Everglades and southern Louisiana wetlands (United States) and the Cienaga de Zapata (Cuba). Across these sites, the convolutional network detected hydrological barriers with up to 84% accuracy. The model performed particularly well for linear hydrological barriers such as roads, dikes, and channels. Notably, some barriers impede flow only seasonally, appearing during low water levels and disappearing when water levels rise. Our automated approach to detecting and assessing wetland hydrologic connectivity can be applied more broadly to support the effective management of fragmented wetland ecosystems.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

New data-driven approach to bridging power system protection gaps with deep learning

Protection is a critical function in power systems to avoid equipment damage, maintain personnel safety, and support system reliability. However, current protective relay technology cannot adequately protect equipment and personnel from effects of some events; these deficiencies are termed protection gaps. In this paper, a data-driven approach is proposed to complement traditional protection technology and distinguish fault conditions from transients caused by normal operations. A combined convolutional neural network and long short-term memory (CNN-LSTM) network is implemented to achieve data translation invariance and capture the temporal correlation of the time-series input data. As a result, the data-driven method can accurately detect system faults despite variation and noise in the input data. In addition, using the CNN-LSTM--based method avoids the complicated, manual feature extraction procedure required by many traditional data-driven methods. The effectiveness of the proposed approach is tested on two kinds of protection gaps: high-impedance faults and transformer inter-turn faults. Lastly, a transfer learning method is also proposed to address the common issue of data-driven methods for which real-world training data are scarce. Extensive study results demonstrate that the proposed approach can accurately bridge power system protection gaps.

42 ENGINEERING↗