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At least 613 records · Page 34

Raw Data published in PeerJ, 2020 for Lower Subalpine needle decomposition field study 2017-2018

This data package contains text files that describe geochemical measurements collected from 2017-2018 during isolated conifer needle decomposition field studies at the Lower Subalpine region of Washington Gulch in Crested Butte, CO. The files within include total carbon and nitrogen (CN) content and fourier-transform infrared spectroscopy (FTIR) results for the initial needles collected in 2016 and after decomposition in October 2018. DI water extractions were conducted with the initial harvested needles in 2016 to determine extractable dissolved organic carbon (DOC), total nitrogen (TN), UV absorbance at 254 nm (UV254), and specific UV absorbance (SUVA). This dataset also includes soil extractable DOC, TN, nitrate, nitrite, ammonium, total organic nitrogen (TON), and pH results from soil collections in 2017. Soil porewater results for DOC, TN, UV254, and SUVA analyses at 15 cm soil depth are also provided from 2017-2018. Gas flux raw data provides CO2, CH4, N2O, and NH3 measurements above needle decomposition over the two study years. Finally, soil samples for microbial DNA extractions were collected from the upper soil depth. This raw data is available in the NCBI SRA database under SRA accession number PRJNA605259. These datasets were generated to investigate the isolated decomposition of spruce and lodgepole conifer needles. The goal of this work was to understand how needle litter impacts terrestrial biogeochemical carbon and nitrogen cycling. Results from this work is detailed in the reference paper "A comparison of lodgepole and spruce needle chemistry impacts on terrestrial biogeochemical processes during isolated needle decomposition. DOI: 10.7717/peerj.9538."

54 ENVIRONMENTAL SCIENCES↗

MODAQ-BB (Modular Offshore Data Acquisition System - Blackbox) [SWR-24-72]

MODAQ-BB is a compact, rapid deployment data acquisition system that can withstand water depths up to 400m. Codenamed "BlackBox" (or simply BB), since its initial purpose was to track marine assets and record vital data streams that could later be recovered in the event of a mishap - much like a traditional black box used in aviation and shipping, the name has stuck. MODAQ BlackBox is a battery-operable microcontroller platform with internal inertial sensing, GPS, satellite communications, and additional I/O (input/output) support in a depth-rated pressure enclosure. Since BB is self-contained and relatively compact, it can be quickly deployed with minimal effort. The enclosure can be clamped to a tube (such as part of a railing) or mast in a location with unobstructed view of the sky using the available clamp accessory or a common hose clamp. While BB is designed to operate unattended, users can configure what data are uploaded and the frequency of satellite transmissions. Once data are uploaded, they can be relayed to an email distribution list, the MODAQ:Web operational dashboard, or a custom destination. BB has found utility in the National Laboratory of the Rockies' (NLR's) Waterpower projects beyond its original vision and has been configured and successfully deployed in more traditional data-gathering applications where a simple, battery-operated solution was indicated. As part of the MODAQ family, BB fills a space in the spectrum of missions that can be supported that were previously impractical using the traditional MODAQ hardware architecture due to factors such as weight, size, and cost.

Raye, Robert↗

Aerosol optical depth retrievals over the Konza Prairie

The aerosol optical depth over the Konza Prairie, near Manhattan, Kansas, was recorded at various locations by five separate teams. These measurements were made in support of the First ISLSCP Field Experiment (FIFE) and used to correct imagery from a variety of satellite and aircraft sensors for the effects of atmospheric scattering and absorption. The results from one instrument are reported here for 26 days in 1987 and for 7 in 1989. Daily averages span a range of 0.05 to 0.28 in the midvisible wavelengths. In addition, diurnal variations are noted in which the afternoon optical depths are greater than those of the morning by as much as 0.07. A comparison between instruments and processing techniques used to determine these aerosol optical depths is provided. The first comparisons are made using summer 1987 data. Differences of as much as 0.05 (midvisible) are observed. Although these data allow reasonable surface reflectance retrievals, they do not agree to within the performance limits typically associated with these types of instruments. With an accuracy goal of 0.02 a preseason calibration/comparison experiment was conducted at a mountain site prior to the final field campaign in 1989. Good calibration data were obtained, and good agreement (0.01, midvisible) was observed in the retrieved optical depth acquired over the Konza. By comparing data from the surface instruments at different locations, spatial inhomogeneities are determined. Then, data from the airborne tracking sunphotometer allow one to determine variations as a function of altitude. Finally, a technique is proposed for using the in situ data to establish an instrument calibration.

Bruegge, Carol J.↗

Validation of the Cloud_CCI (Cloud Climate Change Initiative) cloud products in the Arctic

The role of clouds in the Arctic radiation budget is not well understood. Ground-based and airborne measurements provide valuable data to test and improve our understanding. However, the ground-based measurements are intrinsically sparse, and the airborne observations are snapshots in time and space. Passive remote sensing measurements from satellite sensors offer high spatial coverage and an evolving time series, having lengths potentially of decades. However, detecting clouds by passive satellite remote sensing sensors is challenging over the Arctic because of the brightness of snow and ice in the ultraviolet and visible spectral regions and because of the small brightness temperature contrast to the surface. Consequently, the quality of the resulting cloud data products needs to be assessed quantitatively. In this study, we validate the cloud data products retrieved from the Advanced Very High Resolution Radiometer (AVHRR) post meridiem (PM) data from the polar-orbiting NOAA-19 satellite and compare them with those derived from the ground-based instruments during the sunlit months. The AVHRR cloud data products by the European Space Agency (ESA) Cloud Climate Change Initiative (Cloud_CCI) project uses the observations in the visible and IR bands to determine cloud properties. The ground-based measurements from four high-latitude sites have been selected for this investigation: Hyytiälä (61.84°N, 24.29°E), North Slope of Alaska (NSA; 71.32°N, 156.61°W), Ny-Ålesund (Ny-Å; 78.92°N, 11.93°E), and Summit (72.59°N, 38.42°W). The liquid water path (LWP) ground-based data are retrieved from microwave radiometers, while the cloud top height (CTH) has been determined from the integrated lidar–radar measurements. The quality of the satellite products, cloud mask and cloud optical depth (COD), has been assessed using data from NSA, whereas LWP and CTH have been investigated over Hyytiälä, NSA, Ny-Å, and Summit.

54 ENVIRONMENTAL SCIENCES↗

A Type–Curve Approach for Evaluating Aquifer Properties by Interpreting Shallow Strain Measured During Well Tests

Strains occur at shallow depths in response to pressure changes during well tests in an underlying aquifer, and recent developments in instrumentation have made it feasible to measure essentially the full strain tensor. Simulations using poroelastic analyses indicate that shallow normal strains are approximately proportional to the logarithm of time when a well is injecting into or pumping from a deep aquifer or reservoir. The drawdown is also a linear function of log time, as shown by the classic Cooper-Jacob type-curve analysis. The time when the semilog straight line intercepts the zero-strain axis is similar to the time determined from the Cooper-Jacob pressure analysis, and it can be used to estimate hydraulic diffusivity, suggesting that horizontal strain data can be used directly to estimate aquifer properties. This approach was validated using measurements from shallow (30-m deep) borehole strainmeters during an injection test at a 530-m-deep sandstone aquifer/reservoir in Oklahoma. The results show intercept times for the shallow normal strain data are essentially the same as for deep pressure data from an equivalent radial distance. The slopes of the semilog plots of the pressure and the strain increase at the same time, suggesting that they both respond to a lateral aquifer boundary. Significantly, though, strain was measured at shallow depths while the pressure data were measured at 530-m depth. This suggests that strain data from shallow depths could be an effective way to improve the characterization of an underlying aquifer.

54 ENVIRONMENTAL SCIENCES↗

Earth Survey Applications Division

Accomplishments of research and data analysis conducted to study physical parameters and processes inside the Earth and on the Earth's surface, to define techniques and systems for remotely sensing the processes and measuring the parameters of scientific and applications interest, and the transfer of promising operational applications techniques to the user community of Earth resources monitors, managers, and decision makers are described. Research areas covered include: geobotany, magnetic field modeling, crustal studies, crustal dynamics, sea surface topography, land resources, remote sensing of vegetation and soils, and hydrological sciences. Major accomplishments include: production of global maps of magnetic anomalies using Magsat data; computation of the global mean sea surface using GEOS-3 and Seasat altimetry data; delineation of the effects of topography on the interpretation of remotely-sensed data; application of snowmelt runoff models to water resources management; and mapping of snow depth over wheat growing areas using Nimbus microwave data.

Carpenter, L.↗

Mars Exploration Rover Heatshield Observation Campaign

For the first time ever, engineers were able to observe a heatshield on the surface of another planet after a successful entry through the atmosphere. A three-week heatshield observation campaign was conducted in December 2004 after the Mars Exploration Rover Opportunity rover exited "Endurance Crater." By utilizing the rover's scientific instruments, data was collected to make a qualitative assessment of the performance of the heatshield. This data was gathered to gain a better understanding of how the heatshield performed during entry through the Martian atmosphere. In addition, this unprecedented look at the heatshield offered engineers the opportunity to assess if any unexpected anomalies occurred. Once a survey of the heatshield debris was completed, multiple targets of interest were chosen for the collection of imaging data. This data was then used to assess the char depth of the thermal protection material, which compared well with computational predictions. Extensive imaging data was collected and showed the main seal in pristine conditions, and no observable indications of structure overheating. Additionally, unexpected vehicle dynamics during the atmospheric entry were explained by the observation of thermal blanket remnants attached to the heatshield.

MER↗

Remote determination of exposure degree and iron concentration of lunar soils using VIS-NIR spectroscopic methods

On the Moon, space weathering processes such as micrometeorite bombardment alter the optical properties of lunar soils. As a consequence, lunar soil optical properties are a function not only of composition, but of degree of exposure on the lunar surface as well. In order to accurately assess the compositional properties of the lunar surface using remotely acquired visible and near-infrared spectroscopic data, it is thus necessary either (1) to compare optical properties only of soils characterized by similar degrees of exposure or (2) to otherwise normalize or remove the optical effects due to exposure. Laboratory spectroscopic data for lunar soils are used to develop and test remote spectrocopic methods for determining degree of exposure and for distinguishing between the optical effects due to exposure and those due to composition. A method employing a ratio between reflectances within and outside of the 1 micrometer Fe(2+) crystal field absorption band was developed for remotely identifying highland soils that have reached a steady-state maturity. The relative optical properties of these soils are a function solely of composition and as such can be directly compared. Spectroscopic techniques for accurate quantitative determination of iron content for lunar highland soils are investigated as well. It is shown that approximations of the 1 micrometer Fe(2+) absorption band depth using few to several channel multispectral data or spectroscopic data of inadequate spectral range cannot be used with confidence for compositional analysis. However, band depth measurements derived from continuum-removed high spectral resolution data can be used to calculate the weight percent FeO and relative proportion of iron-bearing silicates in mature lunar highland and mare/highland mixture soils. A preliminary effort to calibrate telescopic band depth to laboratory soil measurements is described.

Fischer, Erich M.↗

Photovoltaic power system operation in the Mars environment

Detailed information on the environmental conditions on Mars are very desirable for the design of photovoltaic systems for establishing outposts on the Martian surface. The variation of solar insolation (global, direct, and diffuse) at the Viking lander's locations is addressed. It can be used, to a first approximation, for other latitudes. The radiation data is based on measured optical depth of the Martian atmosphere derived from images taken of the sun with a special diode on the Viking cameras; and computation based on multiple wavelength and multiple scattering of the solar radiation. The data are used to make estimates of photovoltaic system power, area and mass for a surface power system using regenerative fuel cells for storage and nighttime operation.

Appelbaum, Joseph↗

Photovoltaic power system operation in the Mars environment

Detailed information on the environmental conditions on Mars are very desirable for the design of photovoltaic systems for establishing outposts on the Martian surface. The variation of solar insolation (global, direct, and diffuse) at the Viking lander's locations is addressed. It can be used, to a first approximation, for other latitudes. The radiation data is based on measured optical depth of the Martian atmosphere derived from images taken of the sun with a special diode on the Viking cameras; and computation based on multiple wavelength and multiple scattering of the solar radiation. The data are used to make estimates of photovoltaic system power, area and mass for a surface power system using regenerative fuel cells for storage and nighttime operation.

Appelbaum, Joseph↗

A Comparison of Snow Depth on Sea Ice Retrievals Using Airborne Altimeters and an AMSR-E Simulator

A comparison of snow depths on sea ice was made using airborne altimeters and an Advanced Microwave Scanning Radiometer for the Earth Observing System (AMSR-E) simulator. The data were collected during the March 2006 National Aeronautics and Space Administration (NASA) Arctic field campaign utilizing the NASA P-3B aircraft. The campaign consisted of an initial series of coordinated surface and aircraft measurements over Elson Lagoon, Alaska and adjacent seas followed by a series of large-scale (100 km ? 50 km) coordinated aircraft and AMSR-E snow depth measurements over portions of the Chukchi and Beaufort seas. This paper focuses on the latter part of the campaign. The P-3B aircraft carried the University of Colorado Polarimetric Scanning Radiometer (PSR-A), the NASA Wallops Airborne Topographic Mapper (ATM) lidar altimeter, and the University of Kansas Delay-Doppler (D2P) radar altimeter. The PSR-A was used as an AMSR-E simulator, whereas the ATM and D2P altimeters were used in combination to provide an independent estimate of snow depth. Results of a comparison between the altimeter-derived snow depths and the equivalent AMSR-E snow depths using PSR-A brightness temperatures calibrated relative to AMSR-E are presented. Data collected over a frozen coastal polynya were used to intercalibrate the ATM and D2P altimeters before estimating an altimeter snow depth. Results show that the mean difference between the PSR and altimeter snow depths is -2.4 cm (PSR minus altimeter) with a standard deviation of 7.7 cm. The RMS difference is 8.0 cm. The overall correlation between the two snow depth data sets is 0.59.

Cavalieri, D. J.↗

COVID-19 biomarkers based on respiratory microbiome content

COVID-19 patient care management would greatly benefit from new tools that enable accurate assessment of disease severity and stage, potentially enabling a personalized medicine approach. Detection of the SARS-CoV-2 virus itself, or even quantitation of viral loads, is not sufficient for accurate assessment of disease state beyond diagnosis of infection [eg, doi:10.1093/cid/ciaa344]. Levels of usual suspect protein biomarkers associated with host response to infection [eg, C-reactive protein (CRP); cytokines like IL-6, TNF-alpha, and IL-10; complement proteins like C3a and C5a], and of individual blood cell types (eg, leukocytes, lymphocytes, and subsets thereof), show limited correlation with disease severity and stage, with high patient-to-patient and study-to-study variability [eg, doi:10.1093/cid/ciaa248]. High-dimensional panels of biomarkers should have greater predictive power and resilience to unavoidable sources of variability; however, their assembly from proteins and cell types is extremely difficult, due to technical limitations in analyte measurement, especially with regard to starting material requirements and detection sensitivity. Host response profiling through Next Generation Sequencing (NGS) of gene expression patterns (ie, RNA-Seq) is a promising approach, but at the time of this project there were only two publicly available datasets of relevance [doi:10.1093/cid/ciaa203, doi:10.1080/22221751.2020.1747363], and close inspection of them revealed that each had at least one major flaw that severely undermined its value in supporting robust analysis of host response to SARS-CoV- 2 infection. However, the first of these studies [doi:10.1093/cid/ciaa203] fortuitously collected NGS data not only from host cells, but also from bacteria present in bronchoalveolar lavage fluid (BALF) recovered from COVID-19 patients; and because the respiratory microbiome (in terms of bacterial species content) is far less complex than the human transcriptome, the NGS data collected were sufficient to provide coverage depth supporting robust analysis. Surprisingly, the authors of the study did not carry out a detailed analysis of these data and their potential for revealing important new information about COVID-19. Therefore, we carried out a meta-analysis of the dataset as a first step in evaluating the potential for profiling of respiratory microbiome dynamics as a means of accurately assessing COVID-19 disease state.

59 BASIC BIOLOGICAL SCIENCES↗

Correction techniques for depth errors with stereo three-dimensional graphic displays

Three-dimensional (3-D), 'real-world' pictorial displays that incorporate 'true' depth cues via stereopsis techniques have proved effective for displaying complex information in a natural way to enhance situational awareness and to improve pilot/vehicle performance. In such displays, the display designer must map the depths in the real world to the depths available with the stereo display system. However, empirical data have shown that the human subject does not perceive the information at exactly the depth at which it is mathematically placed. Head movements can also seriously distort the depth information that is embedded in stereo 3-D displays because the transformations used in mapping the visual scene to the depth-viewing volume (DVV) depend intrinsically on the viewer location. The goal of this research was to provide two correction techniques; the first technique corrects the original visual scene to the DVV mapping based on human perception errors, and the second (which is based on head-positioning sensor input data) corrects for errors induced by head movements. Empirical data are presented to validate both correction techniques. A combination of the two correction techniques effectively eliminates the distortions of depth information embedded in stereo 3-D displays.

Parrish, Russell V.↗

KilonovaNet : Surrogate models of kilonova spectra with conditional variational autoencoders

ABSTRACT Detailed radiative transfer simulations of kilonova spectra play an essential role in multimessenger astrophysics. Using the simulation results in parameter inference studies requires building a surrogate model from the simulation outputs to use in algorithms requiring sampling. In this work, we present kilonovanet, an implementation of conditional variational autoencoders (cVAEs) for the construction of surrogate models of kilonova spectra. This method can be trained on spectra directly, removing overhead time of pre-processing spectra, and greatly speeds up parameter inference time. We build surrogate models of three state-of-the-art kilonova simulation data sets and present in-depth surrogate error evaluation methods, which can in general be applied to any surrogate construction method. By creating synthetic photometric observations from the spectral surrogate, we perform parameter inference for the observed light-curve data of GW170817 and compare the results with previous analyses. Given the speed with which kilonovanet performs during parameter inference, it will serve as a useful tool in future gravitational wave observing runs to quickly analyse potential kilonova candidates.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Particle sizes of the Uranus delta ring's inner diffuse companion through comparison of RSS and PPS Voyager occultation data

In January, 1976, Voyager 2's photopolarimeter and UV spectrometer observed Delta Sagitarii and Beta Persei during their occultation by the Uranian delta ring. An inner diffuse companion of this ring was detected and found to have an average width of 12 km. By comparing the widths and equivalent depths of the two sets of data, it is established that the particles making the greatest contribution to the integrated opacities of the companion are of greater-than-several-cm sizes. The particles appear to be located away from the photopolarimetry edges, where there may be particles smaller than those observed elsewhere.

Hui, John↗

Probing the Wind Component of Radio Emission in Luminous High-redshift Quasars

We discuss a probe of the contribution of wind-related shocks to the radio emission in otherwise radio-quiet quasars. Given (1) the nonlinear correlation between UV and X-ray luminosity in quasars, (2) that such a correlation leads to higher likelihood of radiation-line-driven winds in more luminous quasars, and (3) that luminous quasars are more abundant at high redshift, deep radio observations of high-redshift quasars are needed to probe potential contributions from accretion disk winds. We target a sample of 50 z ≃ 1.65 color-selected quasars that span the range of expected accretion disk wind properties as traced by broad C iv emission. 3 GHz observations with the Very Large Array to an rms of ≈10 μJy beam -1 probe to star formation rates of ~400 M ⊙ yr -1 , leading to 22 detections. Supplementing these pointed observations are survey data of 388 sources from the LOFAR Two-meter Sky Survey Data Release 1 that reach comparable depth (for a typical radio spectral index), where 123 sources are detected. These combined observations reveal a radio detection fraction that is a nonlinear function of C iv emission-line properties and suggest that the data may require multiple origins of radio emission in radio-quiet quasars. We find evidence for radio emission from weak jets or coronae in radio-quiet quasars with low Eddington ratios, with either (or both) star formation and accretion disk winds playing an important role in optically luminous quasars and correlated with increasing Eddington ratio. Additional pointed radio observations are needed to fully establish the nature of radio emission in radio-quiet quasars.

79 ASTRONOMY AND ASTROPHYSICS↗

A failure model for sealed nickel-cadmium batteries

A model has been developed to describe failure in electrochemical batteries. The model is based on the concept of the existence and subsequent growth of flaws which ultimately lead to battery failure. This model provides, in a natural way, for the statistical variability of lifetime data. The model as applied to the Crane data indicates that when the effects of temperature and depth of discharge are taken into account, the observed variability in lifetime data is due almost entirely to statistical variability inherent in the battery itself.

Fedors, R. F.↗

Aerosol Optical Depth Determinations for BOREAS

Automated tracking sun photometers were deployed by NASA/Ames Research Center aboard the NASA C-130 aircraft and at a ground site for all three Intensive Field Campaigns (IFCs) of the Boreal Ecosystem-Atmosphere Study (BOREAS) in central Saskatchewan, Canada during the summer of 1994. The sun photometer data were used to derive aerosol optical depths for the total atmospheric column above each instrument. The airborne tracking sun photometer obtained data in both the southern and northern study areas at the surface prior to takeoff, along low altitude runs near the ground tracking sun photometer, during ascents to 6-8 km msl, along remote sensing flightlines at altitude, during descents to the surface, and at the surface after landing. The ground sun photometer obtained data from the shore of Candle Lake in the southern area for all cloud-free times. During the first IFC in May-June ascents and descents of the airborne tracking sun photometer indicated the aerosol optical depths decreased steadily from the surface to 3.5 kni where they leveled out at approximately 0.05 (at 525 nm), well below levels caused by the eruption of Mt. Pinatubo. On a very clear day, May 31st, surface optical depths measured by either the airborne or ground sun photometers approached those levels (0.06-0.08 at 525 nm), but surface optical depths were often several times higher. On June 4th they increased from 0.12 in the morning to 0.20 in the afternoon with some evidence of brief episodes of pollen bursts. During the second IFC surface aerosol optical depths were variable in the extreme due to smoke from western forest fires. On July 20th the aerosol optical depth at 525 nm decreased from 0.5 in the morning to 0.2 in the afternoon; they decreased still further the next day to 0.05 and remained consistently low throughout the day to provide excellent conditions for several remote sensing missions flown that day. Smoke was heavy for the early morning of July 24th but cleared partially by 10:30 local time and cleared fully by 11:30. Heavy smoke characterized the rest of the IFC in both study areas.

Wrigley, R. C.↗