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Methanospirillum species grow within sheaths containing 1–50 or more cells and often in association with syntrophic bacteria that together metabolize a variety of aliphatic and aromatic compounds. Here, we report the complete genomes of Methanospirillum stamsii Pt1 and Methanospirillum lacunae Ki8-1.
ABSTRACT We report the complete genome sequence of Variovorax sp. EBFNA2, a fava bean nodule endophyte. The strain appears to be a new species, and its genome provides insight into its interactions with host plants and potential to promote plant growth and crop yield.
Luteolibacter sp. strain Populi is a bacterium from the phylum Verrucomicrobiota, isolated from the rhizosphere of a black cottonwood tree, Populus trichocarpa, from the Cascade mountains in Washington. Its 6.6-Mb chromosome was completely sequenced using Oxford Nanopore long-read sequencing and is predicted to encode 5,301 proteins and 60 RNAs.
Promicromonospora sp. strain Populi is an actinobacterium isolated from the rhizosphere of a black cottonwood tree, Populus trichocarpa. We completely sequenced its 5.2-Mbp chromosome using Oxford Nanopore long reads and predicted it to encode 4,685 proteins, 3 rRNA operons, and 54 tRNAs and noncoding RNAs.
Here, Clostridioides (Clostridium) difficile is a spore-forming anaerobic bacterium that causes severe intestinal diseases in humans. Here, we report the complete genome sequence of the first C. difficile foodborne type strain (PCR ribotype 078) isolated from food animals in Canada in 2004, which has 100% similarity to the genome sequence of the historic human clinical strain M120.
Here, we report the complete genome sequence of the tetrachloroethene-to-trichloroethene dechlorinator Sulfurospirillum sp. strain ACS TCE . The genome consists of a 38.05-kb circular plasmid and a 2.69-Mb circular chromosome, which encodes 3 identical reductive dehalogenases with 91.47% amino acid identity to the PceA of Sulfurospirillum multivorans strain DSM 12446.
Many soil microorganisms have evolved catabolic strategies to utilize phenolic compounds arising from depolymerized lignin. We report the complete genome sequences of four Pseudomonas sp. isolates that demonstrated robust growth on a wide range of aromatic monomers and dimers that are relevant to the valorization of lignin into value-added chemicals.
We report the complete genome sequences of five Variovorax strains isolated from the roots of Populus species in greenhouse and field settings. Genome sizes range from 7.44 to 7.71 Mbp and encode 6,077–6,879 predicted protein-coding genes. These genome assemblies expand the known genomic catalog of Variovorax in plant-associated environments.
Salinisphaera sp. strain LB1 was isolated from Lake Brown, Western Australia, surface water enriched at pH 4.0 and with 5% (wt/vol) NaCl. We discuss the complete genome sequence in this report.
Reported here is a coding-complete genome sequence of a SARS CoV-2 variant obtained from raw wastewater samples at the University of Tennessee—Knoxville campus. This sequence provides insight into SARS CoV-2 variants that circulate on large college campuses but remain mostly undetected.
Terriglobus albidus strain ORNL is a heterotrophic soil acidobacterium isolated from the rhizosphere of an Eastern cottonwood tree (Populus deltoides) in Tennessee. Its 6.4-Mb chromosome was completely sequenced using PacBio long reads, and it encodes 5,010 proteins and 53 RNAs.
We report the complete genome sequence of Acidithiobacillus ferriphilus GT2, an acidophile isolated from gold mill tailings. The circular genome of GT2 contains 2,489 predicted protein-coding units and a single plasmid. Functional analysis indicates the metabolic potential to oxidize iron and reduced sulfur compounds and to fix N 2 and CO 2 .
Reported here are complete genome sequences for two anaerobic, thermophilic bacteria isolated from wheat straw, i.e., the (hemi)cellulolytic Thermoclostridium stercorarium subspecies strain RKWS1 (3,029,933 bp) and the hemicellulolytic Thermoanaerobacter species strain RKWS2 (2,827,640 bp). Discovery of indigenous thermophiles in plant biomass suggests that high-temperature microorganisms are more ubiquitous than previously thought.
Here, we report the complete genome sequences of two Megasphaera elsdenii strains, ATCC 25940 and NCIMB 702410. M. elsdenii is an anaerobic bacterium capable of producing butanoate and hexanoate and is a member of the Negativicutes .
Theories with massive gravitons are interesting for a variety of physical applications, ranging from cosmological phenomena to holographic modeling of condensed matter systems. To date, they have been formulated as effective field theories with a cutoff proportional to a positive power of the graviton mass m{sub g} and much smaller than that of the massless theory (M{sub P} ≈ 10{sup 19} GeV in the case of general relativity). In this paper, we present an ultraviolet completion for massive gravity valid up to a high energy scale independent of the graviton mass. The construction is based on the existence of a preferred time foliation combined with spontaneous condensation of vector fields. The perturbations of these fields are massive and below their mass, the theory reduces to a model of Lorentz violating massive gravity. The latter theory possesses instantaneous modes whose consistent quantization we discuss in detail. We briefly study some modifications to gravitational phenomenology at low-energies. The homogeneous cosmological solutions are the same as in the standard cosmology. The gravitational potential of point sources agrees with the Newtonian one at distances small with respect to m{sub g}{sup −1}. Interestingly, it becomes repulsive at larger distances.
With the aim of clarifying roles of the 3NFs in nuclei experimental programs with polarized deuterons beams at intermediate energies are in progress at RIKEN RI Beam Factory. As the first step, we have measured a complete set of deuteron analyzing powers (iT{sub 11}, T{sub 20}, T{sub 21}, T{sub 22}) in deuteron-proton elastic scattering at 250 and 294 MeV/nucleon. The obtained data are compared with the Faddeev calculations based on the modern nucleon-nucleon forces together with the Tucson-Melbourne’99, and UrbanaIX three nucleon forces.
An experiment at low energy will be done at the COSY cooler synchrotron and storage ring in order to study the three-particle final states of proton-deuteron scattering reactions measuring a complete set of single and double spin observables over large areas of phase space. The physics objective is to test the predictive power of chiral effective field theory at an energy where convergence is guaranteed and few previous measurements exist. A direct comparison between theoretical predictions and experimental data will be enabled by the use of the so called sampling method.
The scientific instruments onboard the Lomonosov satellite include a complete set of detectors designed to study the gamma and optical emission of cosmic gamma-ray bursts (GRBs). The BDRG gamma spectrometer ensures producing a trigger of a GRB and studying GRB properties in the energy range of 10–3000 keV as well as determining the GRB source coordinates by comparing readings of three differently directed detectors. The SHOK optical cameras (with a field of view of ~20 × 40 degrees) fix a set of images by the GRB trigger preceding the trigger and a post-trigger set at a frequency of about five frames per second. The UFFO instrument incorporates the UBAT telescope with a coding mask for measurements within a range of hard X rays and soft gamma rays and the SMT optical slewing mirror telescope, which can be directed at the GRB source in about 1 s to measure the GRB optical emission at early stages.