Engineering Papers⌕ Search

SEARCH · Engineering Papers

Results for “underwater”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 595 records · Page 33
All sourcesNASA NTRSDOE OSTI
NASA NTRS2018

Satellite Radiation Products for Ocean Biology and Biogeochemistry: Needs, State-Of-The-Art, Gaps, Development Priorities, and Opportunities

Knowing the spatial and temporal distribution of the underwater light field, i.e., the spectral and angular structure of the radiant intensity at any point in the water column, is essential to understanding the biogeochemical processes that control the composition and evolution of aquatic ecosystems and their impact on climate and reaction to climate change. At present, only a few properties are reliably retrieved from space, either directly or via water-leaving radiance. Existing satellite products are limited to planar photosynthetically available radiation (PAR) and ultraviolet (UV) irradiance above the surface and diffuse attenuation coefficient. Examples of operational products are provided, and their advantages and drawbacks are examined. The usefulness and convenience of these products notwithstanding, there is a need, as expressed by the user community, for other products, i.e., sub-surface planar and scalar fluxes, average cosine, spectral fluxes (UV to visible), diurnal fluxes, absorbed fraction of PAR by live algae (APAR), surface albedo, vertical attenuation, and heating rate, and for associating uncertainties to any product on a pixel-by-pixel basis. Methodologies to obtain the new products are qualitatively discussed in view of most recent scientific knowledge and current and future satellite missions, and specific algorithms are presented for some new products, namely sub-surface fluxes and average cosine. A strategy and roadmap (short, medium, and long term) for usage and development priorities is provided, taking into account needs and readiness level. Combining observations from satellites overpassing at different times and geostationary satellites should be pursued to improve the quality of daily-integrated radiation fields, and products should be generated without gaps to provide boundary conditions for general circulation and biogeochemical models. Examples of new products, i.e., daily scalar PAR below the surface, daily average cosine for PAR, and sub-surface spectral scalar fluxes are presented. A procedure to estimate algorithm uncertainties in the total uncertainty budget for above-surface daily PAR, based on radiative simulations for expected situations, is described. In the future, space-borne lidars with ocean profiling capability offer the best hope for improving our knowledge of sub-surface fields. To maximize temporal coverage, space agencies should consider placing ocean-color instruments in L1 orbit, where the sunlit part of the Earth can be frequently observed.

Frouin, Robert↗
NASA NTRS2018

Next-Generation Sensing Technologies for Exploring Ocean Worlds

Dr. Ved Chirayath's plenary presentation will highlight two instrument technologies he invented at NASA including Fluid Lensing, the first remote sensing technology capable of imaging through ocean waves in 3D at sub-cm resolutions, and MiDAR (Multispectral Imaging, Detection and Active Reflectance), a next-generation active hyperspectral remote sensing and optical communications instrument. Fluid Lensing has been used to provide the first 3D multispectral imagery of shallow marine systems from unmanned aerial vehicles (UAVs, or drones), including coral reefs in American Samoa and stromatolite reefs in Hamelin Pool, Western Australia. MiDAR is being deployed on aircraft, and underwater remotely operated vehicles (ROVs) as a new method to remotely sense living and nonliving structures in extreme environments. MiDAR images targets with high-intensity narrowband structured optical radiation to measure an object's non-linear spectral reflectance, image through fluid interfaces such as ocean waves with active fluid lensing, and simultaneously transmit high-bandwidth data. As an active instrument, MiDAR is capable of remotely sensing reflectance at the centimeter (cm) spatial scale with a signal-to-noise ratio (SNR) multiple orders of magnitude higher than passive airborne and spaceborne remote sensing systems with significantly reduced integration time. This allows for rapid video-frame-rate hyperspectral sensing into the far ultraviolet and VNIR wavelengths. Finally, Chirayath will present preliminary results from NASA NeMO-Net (Neural Multi-Modal Observation and Training Network), the first neural network for global coral reef classification using fluid lensing and MiDAR.

Technologies↗
NASA NTRS2018

Delay Tolerant Network Routing as a Machine Learning Classification Problem

This paper discusses a machine learning-based approach to routing for delay tolerant networks (DTNs) [1]. DTNs are networks which experience frequent disconnections between nodes, uncertainty of an end-to-end path, long one-way trip times, and may have high error rates and asymmetric links. Such networks exist in deep space satellite networks, very rural environments, disaster areas and underwater environments. In this work, we use machine learning classifiers to predict a set of neighboring nodes which are the most likely to deliver a message to a desired location based on message history delivery information.We use the Common Open Research Emulator (CORE) [2] to emulate the DTN environment based on real-world location traces and collect network traffic statistics from the Bundle Protocol implementation IBR-DTN [3]. The software architecture for classification-based routing, analysis and preparation of the network history data and prediction results are discussed.

Delay Tolerant Networks↗
NASA NTRS2019

Envisioning an Analog Work Domain Across Deep-Ocean Exploration and Human-Robot Spaceflight Exploration

What if one existing work domain could be leveraged to inform an instantiation of a second type of work domain? This is the question that informed a three year NASA-funded study, SUBSEA (Systematic Underwater Biogeochemical Science and Exploration Analog), on the use of ocean science and exploration via telepresence as an analog for future human-robot spaceflight. SUBSEA included two field programs performed in 2018 and 2019. Each was comprised of a multidisciplinary team of natural scientists studying deep-sea venting sites in tandem with a team of social scientists conducting work ethnography to understand the existing ocean exploration domain. This paper presents results from the 2018 field program which includes analyses that were required to generate specific “flight-like” conditions for the 2019 field program.

Miller, Matthew J.↗
NASA NTRS2019

Using Science Operations Tools and Methods from NASA for Remote Presence Ocean Exploration on Earth: E/V Nautilus Cruise NA108

NASA Ames' Exploration Ground Data Systems (xGDS) supports rapid scientific decision making by synchronizing information in time and space, including video and still images, scientific instrument data, and science and operations notes in geographic and temporal context. We have deployed xGDS at multiple NASA field analog missions over the past decade.In the last two years, we have participated in SUBSEA, a multi-institution collaborative project. SUBSEA used the research ship E/V Nautilus along with its two remotely operated vehicles (ROVs), Hercules and Argus, to explore deep ocean volcanic vents as an analog for ocean worlds (e.g. Enceladus). This work allowed us to compare the existing oceanographic operations methods and technologies used for ocean exploration with corresponding tools and approaches developed and used at NASA. In the first year of SUBSEA we observed existing remote science operations from the Inner Space Center (ISC). In the second year, we deployed xGDS at ISC to complement existing capabilities with xGDS tools designed to support remote Nautilus science operations from the ISC. During operations, video, ROV position and instrument telemetry were streamed from the ship to the ISC. As the science team watched dive operations, they could annotate the data with observations that were relevant to their work domain. Later, the team members could review the data at their own pace to collaboratively develop a dive plan for the next day, which had to be delivered on a fixed daily schedule.The opportunity to compare operations under different conditions enabled us to make several key observations about conducting remote science and planning operations efficiently: (i) Reviewing data collaboratively and interactively with temporal and spatial context was critical for the remote science team's ability to plan dive operations on the Nautilus. (ii) Science team members were actively engaged with the remote dive operations because they could interact with the collected data and visualize it as they desired. (iii) Being able to replay past events at accelerated speeds, and jump to points in time and spaced based on search results, provided efficient access to critical points of interest in a massive volume of data, so the remote science team could deliver plans on time. SUBSEA (Systematic Underwater Biogeochemical Science and Exploration Analog) is a multi-institution collaboration supported by NASA, NOAA's Office of Exploration Research (OER), the Ocean Exploration Trust (OET) and the University of Rhode Island's Graduate School of Oceanography (GSO). ISC is GSO's telepresence operations facility.

Lees, David S.↗
NASA NTRS2020

NASA Next-Generation Sensing Technologies for Earth & Planetary Science

Dr. Ved Chirayath's seminar will highlight new sensing technologies and airborne platforms he is developing for Earth & Space Science as director of the NASA Silicon Valley Laboratory for Advanced Sensing. His talk will feature recent work on Fluid Lensing, the first remote sensing technology capable of imaging through ocean waves in 3D at sub-cm resolutions, MiDAR, a next-generation active hyperspectral remote sensing and optical communications instrument, airborne gas sensing of multipollutant combustion sources, and a plasma actuated unmanned aerial vehicle (UAV) that utilized high-voltage dielectric discharge devices to achieve the first plasma controlled flight in history.Fluid Lensing and the NASA FluidCam instrument have been used extensively to provide distortion-free 3D multispectral imagery from UAVs of shallow marine systems around the world. MiDAR is being deployed on aircraft and underwater remotely operated vehicles (ROVs) as a new method to remotely sense living and nonliving structures in extreme environments as an analog for future Ocean Worlds robotic exploration missions. Finally, Chirayath will present preliminary results from NeMO-Net, a supercomputer-based neural network that uses a citizen science video game for global multimodal coral reef benthic habitat mapping, fusing remote sensing data from Fluid Lensing, MiDAR, NASA's Earth Observing System, and commercial satellites, to better understand the present and past dynamics of shallow marine systems. Together, these maturing technologies present promising new ways in which to explore terrestrial, marine, and aerial systems on Earth, and, ultimately, aid in the search for extraterrestrial life within our solar system and beyond.

Chirayath, Ved↗
NASA NTRS2020

Conducting Efficient Remote Science and Planning Operations for Ocean Exploration Using Exploration Ground Data Systems (xGDS)

NASA Ames’ Exploration Ground Data Systems (xGDS) supports rapid scientific decision making by synchronizing information in time and space, including video and still images, scientific instrument data, and science and operations notes in geographic and temporal context. We have deployed xGDS at multiple NASA field analog missions over the past decade. In the last two years, we have participated in SUBSEA, a multi-institution collaborative project*. SUBSEA used the research ship E/V Nautilus along with its two remotely operated vehicles (ROVs), Hercules and Argus, to explore deep ocean volcanic vents as an analog for ocean worlds (e.g. Enceladus). This work allowed us to compare the existing oceanographic operations methods and technologies used for ocean exploration with corresponding tools and approaches developed and used at NASA. In the first year of SUBSEA we observed existing remote science operations from the Inner Space Center (ISC)**. In the second year, we deployed xGDS at ISC to complement existing capabilities with xGDS tools designed to support remote Nautilus science operations from the ISC. During operations, video, ROV position and instrument telemetry were streamed from the ship to the ISC. As the science team watched dive operations, they could annotate the data with observations that were relevant to their work domain. Later, the team members could review the data at their own pace to collaboratively develop a dive plan for the next day, which had to be delivered on a fixed daily schedule. The opportunity to compare operations under different conditions enabled us to make several key observations about conducting remote science and planning operations efficiently: (i) Reviewing data collaboratively and interactively with temporal and spatial context was critical for the remote science team’s ability to plan dive operations on the Nautilus. (ii) Science team members were actively engaged with the remote dive operations because they could interact with the collected data and visualize it as they desired. (iii) Being able to replay past events at accelerated speeds, and jump to points in time and spaced based on search results, provided efficient access to critical points of interest in a massive volume of data, so the remote science team could deliver plans on time. * SUBSEA (Systematic Underwater Biogeochemical Science and Exploration Analog) is a multi-institution collaboration supported by NASA, NOAA’s Office of Exploration Research (OER), the Ocean Exploration Trust (OET) and the University of Rhode Island’s Graduate School of Oceanography (GSO).

Cohen, Tamar E.↗
NASA NTRS2020

Toa Baja Disasters: Utilizing Open-Source Earth Observations to Inform the Toa Baja Municipality’s Flood Mitigation Efforts and Educate the Public

Toa Baja, located just west of San Juan in Puerto Rico, is known as “the underwater city” due to its propensity to flood. The city contains the mouth of the island’s longest river, Río de la Plata, which drains into the Atlantic Ocean on the northern edge of the municipality. Proximity to these major water features and the flat, low terrain contribute to the flood-prone nature of the area. During tropical storm events, such as Hurricane Maria in 2017, Toa Baja experienced inundation of up to 20 feet. Changes in the global climate system are causing more intense and frequent tropical storms, making places like Toa Baja subject to irreparable damage. This NASA DEVELOP project collaborated with the Municipio Autónomo de Toa Baja, ResilientSEE, and the Massachusetts Institute of Technology Urban Risk Lab to supplement recent 2018 Federal Emergency Management Agency Hydraulic Engineering Centers-River Analysis System flood maps, which designated 63% of the area as a flood plain. The analysis provides a high-resolution interpretation of flood susceptibility using a variety of factors that collectively influence the likelihood of flooding. Sentinel-1 C-Band Synthetic Aperture Radar (C-SAR) data processed with Google Earth Engine scripting identified historical inundation and was used for validation purposes. Socioeconomic factors were combined with the inundation layer producing a final risk output. These outputs will improve public understanding of exposure to flood risk in Toa Baja and provide scientific evidence for flood mitigation advocacy.

Disasters↗
NASA NTRS2020

Toa Baja Disasters: Utilizing Open-Source Earth Observations to Inform the Toa Baja Municipality’s Flood Mitigation Efforts and Educate the Public

Toa Baja, located just west of San Juan in Puerto Rico, is known as “the underwater city” due to its propensity to flood. The city contains the mouth of the island’s longest river, Río de la Plata, which drains into the Atlantic Ocean on the northern edge of the municipality. Proximity to these major water features and the flat, low terrain contribute to the flood-prone nature of the area. During tropical storm events, such as Hurricane Maria in 2017, Toa Baja experienced inundation of up to 20 feet. Changes in the global climate system are causing more intense and frequent tropical storms, making places like Toa Baja subject to irreparable damage. This NASA DEVELOP project collaborated with the Municipio Autonómo de Toa Baja, ResilientSEE, and the Massachusetts Institute of Technology Urban Risk Lab to supplement recent 2018 Federal Emergency Management Agency Hydraulic Engineering Centers-River Analysis System flood maps, which designated 63% of the area as a flood plain. The analysis provides a high-resolution interpretation of flood susceptibility using a variety of factors that collectively influence the likelihood of flooding. Sentinel-1 C-Band Synthetic Aperture Radar (C-SAR) data processed with Google Earth Engine scripting identified historical inundation and was used for validation purposes. Socioeconomic factors were combined with the inundation layer producing a final risk output. These outputs will improve public understanding of exposure to flood risk in Toa Baja and provide scientific evidence for flood mitigation advocacy.

Disasters↗
NASA NTRS2020

Learning instrument invariant characteristics for generating high-resolution global coral reef maps

Coral reefs are one of the most biologically complex and diverse ecosystems within the shallow marine environment. Unfortunately, these underwater ecosystems are threatened by a number of anthropogenic challenges, including ocean acidification and warming, overfishing, and the continued increase of marine debris in oceans. This requires a comprehensive assessment of the world's coastal environments, including a quantitative analysis on the health and extent of coral reefs and other associated marine species, as a vital Earth Science measurement. However, limitations in observational and technological capabilities inhibit global sustained imaging of the marine environment. Harmonizing multimodal data sets acquired using different remote sensing instruments presents additional challenges, thereby limiting the availability of good quality labeled data for analysis. In this work, we develop a deep learning model for extracting domain invariant features from multimodal remote sensing imagery and creating high-resolution global maps of coral reefs by combining various sources of imagery and limited hand-labeled data available for certain regions. This framework allows us to generate, for the first time, coral reef segmentation maps at 2-meter resolution, which is a significant improvement over the kilometer-scale state-of-the-art maps. Additionally, this framework doubles accuracy and IoU metrics over baselines that do not account for domain invariance.

Domain Adaptation↗
NASA NTRSDate not supplied

Utilizing Open-Source Earth Observations to Inform the Toa Baja Municipality’s Flood Risk Mitigation Efforts and Educate the Public

Global climate changes contribute to more intense and frequent tropical storms, subjecting places like Toa Baja, Puerto Rico to critical damage. Known as “the underwater city” due to its propensity to flood, residents of Toa Baja face constant flood risk. During extreme tropical storm events, such as Hurricane Maria in 2017, residents experienced up to 20 feet of inundation. The NASA DEVELOP National Program collaborated with the Municipio Autónomo de Toa Baja, ResilientSEE-PR, and the MIT Urban Risk Lab to supplement 2018 FEMA HEC-RAS flood maps that designate 63% of Toa Baja as a flood plain. This analysis provides a high-resolution interpretation of flood risk through two lenses; susceptibility and vulnerability. For this analysis, susceptibility consists of nine weighted layers: NDVI, landcover, slope, elevation, topographic wetness index, height above nearest drainage, saturated hydraulic conductivity, distance to water, and storm surge. These factors are consistently used to evaluate susceptibility to flood, but their weights vary by analysis. Vulnerability consists of population, informal settlements, and building density, which were given equal weight. Susceptibility and vulnerability were combined to map flood risk. This analysis used a bivariate legend to understand the different levels of risk along a spectrum from low susceptibility and low vulnerability (low risk) to high susceptibility and high vulnerability (high risk). Data processed in Google Earth Engine, which identified historical inundation on various occasions, were used to validate the flood susceptibility layers. Results showed 89% of areas designated as high susceptibility are located within the floodway designated by the FEMA HEC-RAS maps. The eastern region of Toa Baja is most at risk for flooding due to high susceptibility to flooding along with a high density of population, buildings, and informal settlements. The resulting map also reveals the presence of smaller high-risk areas all around the municipality. This analysis provides scientific evidence for flood risk mitigation in Toa Baja by highlighting areas that might be impacted by strong floods in the future. Additionally, these results are communicated in an Esri ArcGIS StoryMap, an accessible platform that can easily inform the public about the flood risk in their neighborhood.

Adriana Le Compte↗
NASA NTRS2021

An Operational Overview of the EXport Processes in the Ocean from RemoTe Sensing (EXPORTS) Northeast Pacific Field Deployment

The goal of the EXport Processes in the Ocean from RemoTe Sensing (EXPORTS) field campaign is to develop a predictive understanding of the export, fate, and carbon cycle impacts of global ocean net primary production. To accomplish this goal, observations of export flux pathways, plankton community composition, food web processes, and optical, physical, and biogeochemical (BGC) properties are needed over a range of ecosystem states. Here we introduce the first EXPORTS field deployment to Ocean Station Papa in the Northeast Pacific Ocean during summer of 2018, providing context for other papers in this special collection. The experiment was conducted with two ships: a Process Ship, focused on ecological rates, BGC fluxes, temporal changes in food web, and BGC and optical properties, that followed an instrumented Lagrangian float; and a Survey Ship that sampled BGC and optical properties in spatial patterns around the Process Ship. An array of autonomous underwater assets provided measurements over a range of spatial and temporal scales, and partnering programs and remote sensing observations provided additional observational context. The oceanographic setting was typical of late-summer conditions at Ocean Station Papa: a shallow mixed layer, strong vertical and weak horizontal gradients in hydrographic properties, sluggish sub-inertial currents, elevated macronutrient concentrations and low phytoplankton abundances. Although nutrient concentrations were consistent with previous observations, mixed layer chlorophyll was lower than typically observed, resulting in a deeper euphotic zone. Analyses of surface layer temperature and salinity found three distinct surface water types, allowing for diagnosis of whether observed changes were spatial or temporal.The 2018 EXPORTS field deployment is among the most comprehensive biological pump studies ever conducted. A second deployment to the North Atlantic Ocean occurred in spring 2021, which will be followed by focused work on data synthesis and modeling using the entire EXPORTS data set.

Biological pump↗
NASA NTRS2022

Stratospheric Circulation Changes Associated with the Hunga Tonga-Hunga Ha'apai Eruption

The 15 January 2022 eruption of the Hunga Tonga-Hunga Ha'apai underwater volcano (20.5°S, 175.4°W) injected a record amount of water directly into the stratosphere. This study attempts to quantify this impact on the temperature, as well as the subsequent changes to the stratospheric circulation, during the months following the eruption based on reanalysis fields. The extreme nature of the temperature, wind, and circulation changes are tracked through comparisons of the first six months of 2022 with the previous 42 years. Examination of the data assimilation process shows that at 20 hPa the thermal observations are forcing significant cooling, compensating for the absence of the excess stratospheric moisture in the model used for the reanalysis. In response to this cooling the atmosphere adjusts by creating strong westerly winds above the temperature anomaly and large changes to the downward and poleward mean meridional circulation.

Volcano↗
NASA NTRSDate not supplied

Coupled Aerosol-Chemistry Simulations of the January 2022 Eruptions of Hunga Tonga-Hunga Ha’apai in the NASA GEOS Earth System Model

The January 2022 eruptions of the underwater Hunga Tonga-Hunga Ha’apai volcano injected more than 100 Tg of water vapor and approximately 0.5 Tg of sulfur dioxide into the stratosphere. Injected materials reached as high as ~55 km in altitude, while the main plume from the eruption travelled west over Australia and the Indian Ocean between about 20 – 30 km altitude. We investigate the transport and the impact of the erupted materials in coupled aerosol-chemistry simulations performed with the NASA Goddard Earth Observing System (GEOS) Earth system model. A sulfur mechanism introduced into the Global Modeling Initiative (GMI) stratospheric-tropospheric chemistry package allows for an interactive simulation of the water vapor-chemistry impacts, and the large water vapor perturbation results in rapid conversion of sulfur dioxide to sulfate aerosol in our aerosol mechanism. We report on the results of a multi-year ensemble of simulations performed with this system that include a control ensemble (no eruption), a water vapor-only injection ensemble, and a water vapor and sulfur dioxide injection ensemble. Simulations of the near-field aerosol and chemistry transport are compared to available measurements from OMPS-LP, OMPS-NM, CALIOP, MLS, and other sensors. The extended impact of the volcanic materials on the stratospheric composition and chemistry over the next several years is further investigated in forecast simulations.

Peter Colarco↗
NASA NTRSDate not supplied

Stratospheric Circulation Changes Associated with the Hunga Tonga-Hunga Ha'apai Eruption

The 15 January 2022 eruption of the Hunga Tonga-Hunga Ha'apai underwater volcano injected an unprecedented amount of water directly into the stratosphere. This study attempts to quantify this impact on the temperature, as well as the subsequent changes to the stratospheric circulation, during the months following the eruption based on reanalysis fields. The extreme nature of the temperature, wind, and circulation changes are tracked through comparisons of the months of 2022 with the past 42 years. Examination of the data assimilation process shows that at 20 hPa the data is forcing temperature cooling at record rates resulting in record cold temperatures. Details of the stratospheric perturbations in latitude and pressure are presented for June 2022 where record strong cooling is found at 20 hPa from 60oS to 30oS. In response to the cooling the atmosphere adjusts by creating record strong winds above the temperature anomaly and large changes to the downward and poleward mean meridional circulation.

Lawrence Coy↗
NASA NTRSDate not supplied

Trustworthy Autonomy for Gateway Vehicle System Manager

This webinar will present techniques for achieving trusted autonomous operations that are being pioneered on the NASA Lunar Gateway Vehicle System Manager (VSM). The challenges of achieving trusted autonomy faced by the VSM project are similar to challenges in underwater autonomous systems. The webinar will describe the overall approach to verification and present in detail the use of design-time (development) assume-guarantee contracts using model checking and runtime (operational) assume-guarantee contracts. The webinar will conclude with a summary of lessons learned to date and future challenges.

Assume-guarantee contracts↗
NASA NTRS2021

Stochastic Guidance of Buoyancy Controlled Vehicles under Ice Shelves using Ocean Currents

We propose a novel technique for guidance ofbuoyancy-controlled vehicles in uncertain under-ice ocean flows.In-situ melt rate measurements collected at the grounding zoneof Antarctic ice shelves, where the ice shelf meets the underlyingbedrock, are essential to constrain models of future sea levelrise. Buoyancy-controlled vehicles, which control their verticalposition in the water column but have no means of horizontalpropulsion, offer an affordable and reliable platform for suchin-situ data collection. However, reaching the grounding zonerequires vehicles to traverse tens of kilometers under the iceshelf, with approximate position knowledge and no meansof communication, in highly variable and uncertain oceancurrents. To address this challenge, we propose a partiallyobservable MDP approach that exploits model-based knowledgeof the under-ice currents and, critically, of their uncertainty,to synthesize effective guidance policies. The approach usesapproximate dynamic programming to model uncertainty inthe currents, and QMDP to address localization uncertainty.Numerical experiments show that the policy can deliver upto 88.8% of underwater vehicles to the grounding zone – a33% improvement compared to state-of-the-art guidance techniques, and a 262% improvement over uncontrolled drifters.Collectively, these results show that model-based under-iceguidance is a highly promising technique for exploration ofunder-ice cavities, and has the potential to enable cost-effectiveand scalable access to these challenging and rarely observed environments.

Clark, Evan B.↗
NASA NTRS2022

Design of a Low-Cost, Submersible, Digital Holographic Microscope for in Situ Microbial Imaging

The methodologies for studying marine microbiology typically consist of utilizing instrumentation within a laboratory. This typically requires extracting a sample from its place of origin prior to examination, which may be days after collection. Oftentimes, the solution is to bring the lab to the ocean, which may be costly and provide further limitations for a sterile and stable laboratory environment. Here we present a low-cost, submersible, digital holographic microscope (DHM) designed to image marine microorganisms (such as bacteria and plankton) in their natural underwater environment. Our instrument eliminates the need to transport samples and allows for instantaneous data collection of microbes in-situ. The DHM achieves sub-micron spatial resolution and is paired with artificial intelligence for the detection and tracking of specimens to reduce the overall collected data. This instrument also aims to reduce the cost of manufacturing and field expenses relative to marine microbiological research. “Off the shelf” components were selected in the design process of this instrument which allows us to achieve precise results without sacrificing data quality. The DHM itself costs under one thousand dollars and features a low-cost high-resolution camera, the Arducam MT9J001. Included in the design were five main subsystems: optical, mechanical, electrical, power, and machine learning. Our on board computer and artificial intelligence consist of a Raspberry Pi 4 (8 Gb) and Google Coral USB Tensorflow accelerator. Instrument testing has successfully proven our abilities of data acquisition for at least two hours in depths of at least forty meters below sea level. Additionally, our artificial intelligence system is currently capable of tracking up to ten areas of interest in a fraction of a second with over ninety percent confidence via the neural net driven by the tensor cores on the Google Coral. Furthermore, we have demonstrated the versatility of our instrument by mounting it on an ocean-going ROV, the BlueRov2 by BlueRobotics. Our tests on the BlueRov2 exemplified the cost-effective nature of a submersible and reusable instrument that can be implemented in moderate environments and on most vessels.

Wallace, James Kent↗