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At least 595 records · Page 33

Density Functional Tight-Binding Models for Band Structures of Transition-Metal Alloys and Surfaces across the d -Block

First-principles electronic structure simulations are an invaluable tool for understanding chemical bonding and reactions. While machine-learning models such as interatomic potentials significantly accelerate the exploration of potential energy surfaces, electronic structure information is generally lost. Particularly in the field of heterogeneous catalysis, simulated electron band structures provide fundamental insights into catalytic reactivity. This ab initio knowledge is preserved in semiempirical methods such as density functional tight binding (DFTB), which extend the accessible computational length and time scales beyond first-principles approaches. In this paper here we present Shell-Optimized Atomic Confinement (SOAC) DFTB electronic-part-only parametrizations for bulk and surface band structures of all d-block transition metals that enable efficient predictions of electronic descriptors for large structures or high-throughput studies on complex systems outside the computational reach of density functional theory.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Structural Design and Modeling of MARVEL Primary Coolant System Using the ASME Section III, Division 5, Code

This paper presents the structural design and supporting analysis for the Microreactor Applications Research Validation and Evaluation (MARVEL) primary coolant system (PCS) using the American Society of Mechanical Engineers (ASME) Boiler and Pressure Vessel Code Section III, Division 5, rules. MARVEL is a liquid metal–cooled microreactor intended to provide experimental capabilities for the rapid testing and development of microreactor technologies. The PCS utilizes high-temperature sodium-potassium liquid metal as the primary coolant and operates at a design temperature of 570°C, necessitating the consideration of creep-related failure mechanisms. The base metal for the PCS is 316H stainless steel, and the weldments are made with a 16-8-2 filler. The design approach incorporates the current base code rules along with ASME code cases N-924, N-861, and N-862 to address primary load, ratcheting, and creep-fatigue evaluations, respectively. The reactor’s operation involves complex thermal and mechanical interactions due to natural convective flow and differential thermal expansion between components. In conclusion, this paper discusses the structural engineering challenges encountered, such as managing thermal stresses in the distribution plenum and guard vessel, and outlines the strategies implemented to meet the code requirements, including design modifications and operational constraints.

21 - SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLAN↗

Solitary zonal structures in subcritical drift waves: a minimum model

Solitary zonal structures have recently been identified in gyrokinetic simulations of subcritical drift-wave (DW) turbulence with background shear flows. However, the nature of these structures has not been fully understood yet. Here, we show that similar structures can be obtained within a reduced model, which complements the modified Hasegawa–Mima equation with a generic primary instability and a background shear flow. We also find that these structures can be qualitatively reproduced in the modified Hasegawa–Wakatani equation, which subsumes the reduced model as a limit. In particular, we illustrate that in both cases, the solitary zonal structures approximately satisfy the same 'equation of state', which is a local relation connecting the DW envelope with the zonal-flow velocity. Due to this generality, our reduced model can be considered as a minimum model for solitary zonal structures in subcritical DWs.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

RSPECT: A PROSPECT-based model incorporating the real structure of rice leaves

Radiative transfer models (RTMs) describe how light is absorbed, scattered, and transmitted within leaves by simulating mechanistic light propagation processes. The PROSPECT model is based on measurable parameters (the leaf biochemical content) and a non-measurable parameter (the leaf anatomical structure represented by the leaf structure parameter (N)). The effect of N on the optical properties of leaves has been investigated through a number of local and global sensitivity analyses. Other studies have directly evaluated the effect of the leaf anatomical structure on spectral reflectance, particularly in the near infrared region. However, the relationship between N and the anatomical structure is unclear. Here, in this study, we leveraged eLeaf, a ray tracing-based 3D rice leaf simulator, to establish relationships between leaf anatomical features and spectral properties, enabling us to replace N in the PROSPECT-4 model with measurable leaf anatomical parameters and develop the RSPECT model. The leaf thickness at minor vein, leaf thickness at bulliform cells, mesophyll thickness at minor vein, and distance between two minor veins could be used to predict N effectively. The RSPECT model achieved spectral simulation accuracy comparable to PROSPECT-4 and was more suitable for parameter inversion of the physical and chemical properties of rice leaves, with relative root mean square errors of 7.4% for chlorophyll content, 5.6% for equivalent water thickness, and 7.5% for dry matter content. In conclusion, RSPECT improves radiative transfer modeling by integrating measurable anatomical features and provides a framework for extending this approach to other vegetation types.

hyperspectral↗

Combining pairwise structural similarity and deep learning interface contact prediction to estimate protein complex model accuracy in CASP15

Abstract Estimating the accuracy of quaternary structural models of protein complexes and assemblies (EMA) is important for predicting quaternary structures and applying them to studying protein function and interaction. The pairwise similarity between structural models is proven useful for estimating the quality of protein tertiary structural models, but it has been rarely applied to predicting the quality of quaternary structural models. Moreover, the pairwise similarity approach often fails when many structural models are of low quality and similar to each other. To address the gap, we developed a hybrid method (MULTICOM_qa) combining a pairwise similarity score (PSS) and an interface contact probability score (ICPS) based on the deep learning inter‐chain contact prediction for estimating protein complex model accuracy. It blindly participated in the 15th Critical Assessment of Techniques for Protein Structure Prediction (CASP15) in 2022 and performed very well in estimating the global structure accuracy of assembly models. The average per‐target correlation coefficient between the model quality scores predicted by MULTICOM_qa and the true quality scores of the models of CASP15 assembly targets is 0.66. The average per‐target ranking loss in using the predicted quality scores to rank the models is 0.14. It was able to select good models for most targets. Moreover, several key factors (i.e., target difficulty, model sampling difficulty, skewness of model quality, and similarity between good/bad models) for EMA are identified and analyzed. The results demonstrate that combining the multi‐model method (PSS) with the complementary single‐model method (ICPS) is a promising approach to EMA.

59 BASIC BIOLOGICAL SCIENCES↗

Local Structure Analysis and Modelling of Lignin‐Based Carbon Composites through the Hierarchical Decomposition of the Radial Distribution Function

Abstract Carbonized lignin has been proposed as a sustainable and domestic source of activated, amorphous, graphitic, and nanostructured carbon for many industrial applications as the structure can be tuned through processing conditions. However, the inherent variability of lignin and its complex physicochemical structure resulting from feedstock and pulping selection make the Process‐Structure‐Property‐Performance (PSPP) relationships hard to define. In this work, radial distribution functions (RDFs) from synchrotron X‐ray and neutron scattering of lignin‐based carbon composites (LBCCs) are investigated using the Hierarchical Decomposition of the Radial Distribution Function (HDRDF) modelling method to characterize the local atomic environment and develop quantitative PSPP relationships. PSPP relationships for LBCCs defined by this work include crystallite size dependence on lignin feedstock as well as increasing crystalline volume fraction, nanoscale composite density, and crystallite size with increasing reduction temperature.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Unified Stress-Strain Model for Plasticity to the Structural Instability

A unified model for the work hardening Θσ Θ(σ) and stress-strain σε σ(ε) behavior is presented that accounts for deformation under tensile loading, from the onset of yielding at the proportional limit up to the ultimate strength as defined at the structural instability. The origin of this approach is based on a negative exponential formulation for an asymptotic-curvilinear work-hardening model that accounts for the rapid strengthening of metals as well as the continuation of steady-state deformation to the instability.

36 MATERIALS SCIENCE↗

Formulation and calibration of two-dimensional constitutive models for composite structures based on panel tests

Steel Plate Concrete (SC) composite members have been widely adopted because of its cost-efficiency and enhanced structural behavior. While researchers have attempted to study its in-plane shear behavior in the past twenty years, very limited number of large-scale pure shear tests were performed due to the challenge of experimental set-up and the availability of facilities. In this paper, a series of uniaxial loading tests and two full-scale pure shear panel tests of SC members were reported, on which the “mechanics-based Membrane Model of SC elements (MM-SC)” is developed. The MM-SC model is based on the fixed-angle crack formulation and the smeared-crack formulation, in which the experimental-based uniaxial constitutive models are implemented, considering the local buckling of faceplate, the tension stiffening of steel plate, the strength degradation of cracked concrete and the confinement effect of concrete. The proposed MM-SC model is subsequently incorporated into the object-oriented software OpenSEES. Finally, the simulation results of proposed model well predict the SC test observations in terms of critical branch points and structural behaviors, including initial stiffness, cracking strength, post-crack stiffness, yield strength, maximum strength, and failure modes.

42 ENGINEERING↗

Electronic structure theory on modeling short-range noncovalent interactions between amino acids

While short-range noncovalent interactions (NCIs) are proving to be of importance in many chemical and biological systems, these atypical bindings happen within the so-called van der Waals envelope and pose an enormous challenge for current computational methods. We introduce SNCIAA, a database of 723 benchmark interaction energies of short-range noncovalent interactions between neutral/charged amino acids originated from protein x-ray crystal structures at the “gold standard” coupled-cluster with singles, doubles, and perturbative triples/complete basis set [CCSD(T)/CBS] level of theory with a mean absolute binding uncertainty less than 0.1 kcal/mol. Subsequently, a systematic assessment of commonly used computational methods, such as the second-order Møller−Plesset theory (MP2), density functional theory (DFT), symmetry-adapted perturbation theory (SAPT), composite electronic-structure methods, semiempirical approaches, and the physical-based potentials with machine learning (IPML) on SNCIAA is carried out. It is shown that the inclusion of dispersion corrections is essential even though these dimers are dominated by electrostatics, such as hydrogen bondings and salt bridges. Overall, MP2, ωB97M-V, and B3LYP+D4 turned out to be the most reliable methods for the description of short-range NCIs even in strongly attractive/repulsive complexes. SAPT is also recommended in describing short-range NCIs only if the δMP2 correction has been included. The good performance of IPML for dimers at close-equilibrium and long-range conditions is not transferable to the short-range. We expect that SNCIAA will assist the development/improvement/validation of computational methods, such as DFT, force-fields, and ML models, in describing NCIs across entire potential energy surfaces (short-, intermediate-, and long-range NCIs) on the same footing.

Chemistry↗

A thin-walled composite beam model for light-weighted structures interacting with fluids

A thin-walled beam model is proposed for structures of variable cross-section, which can be either open or closed and includes multicellular cross-sections with either isotropic or orthotropic materials. The proposed model does not require any priori definition of cross-sectional warping which instead results from the solution of the problem. To achieve that a special deformation pattern is superimposed on the bending deformation described by Euler–Bernoulli beam theory. All sectional properties are automatically incorporated in the analysis as a result of the usual variational formulation of the system of equations. The proposed model is specifically designed to simulate the dynamics of wind/hydrokinetic turbine blade with low computational cost, especially in fluid–structure interaction (FSI) simulation. A number of test cases have been carried out to validate the proposed structural model which show good agreement between the results obtained her e and the solutions available in literature. Finally, FSI simulation of a hydrokinetic blade under field condition is carried out to illustrate the capability of the current thin-walled beam model in practice.

42 ENGINEERING↗

Majorana parameters of the interacting boson model of nuclear structure and their implication for 0 ν β β decay

Here, the well-known spherical-deformed-transitional nucleus and potential 0$\textit{νββ}$ emitter 150 Nd and its daughter 150 Sm were investigated in nuclear resonance fluorescence experiments using quasimonoenergetic, linearly polarized γ-ray beams. For both nuclei transitions from the 1 + scissors mode to the $0^+_2$ and $2^+_2$ states were observed for the first time and their respective $\textit{M}$ 1 transition strengths were determined. Through a systematic investigation, a sensitivity of these transition strengths to the three Majorana parameters of the interacting boson model-2 (IBM-2) was established. In combination with the novel experimental data, this poses strong constraints to the Majorana parameters in improved IBM-2 representations of both nuclei. A subsequent recalculation of the nuclear matrix elements (NMEs) for the 150 Nd → 150 Sm 0$\textit{νββ}$ decay in the IBM-2 with these improved representations results in $M^{(0νββ)}_{\text{IBM-2}}[0^+_1]$ = 3.35 for the NME for 0$\textit{νββ}$ decay into the ground state of 150 Sm and $M^{(0νββ)}_{\text{IBM-2}}[0^+_2]$ = 1.30 for 0$\textit{νββ}$ decay to its $0^+_2$ state.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Neural operators for stochastic modeling of nonlinear structural system response to natural hazards

Traditionally, neural networks have been employed to learn the mapping between finite-dimensional Euclidean spaces. However, recent research has opened up new horizons, focusing on the utilization of deep neural networks to learn operators capable of mapping infinite-dimensional function spaces. Here, in this work, we employ two state-of-the-art neural operators, the deep operator network (DeepONet) and the Fourier neural operator (FNO) for the prediction of the nonlinear time history response of structural systems exposed to natural hazards, such as earthquakes and windstorms. Specifically, we propose two architectures, a self-adaptive FNO and a fast Fourier transform-based DeepONet (DeepFNOnet), where we employ a FNO beyond the DeepONet to learn the discrepancy between the ground truth and the solution predicted by the DeepONet. To demonstrate the efficiency and applicability of the architectures, two problems are considered. In the first, we use the proposed model to predict the seismic nonlinear dynamic response of a six-story shear building subject to stochastic ground motions. In the second problem, we employ the operators to predict the wind-induced nonlinear dynamic response of a high-rise building while explicitly accounting for the stochastic nature of the wind excitation. In both cases, the trained metamodels achieve high accuracy while being orders of magnitude faster than their corresponding high-fidelity models.

DeepONet↗

Parametric reduced order models for graded lattice structures

Graded lattice structures, characterized by smoothly varying mechanical properties, hold significant promise for optimizing material distribution in advanced engineering applications. However, accurately modeling these structures poses substantial computational challenges due to the continuous geometric variations within their unit cells. Here, to address these challenges, this paper introduces a novel Efficient Reduced Order Model (EROM) that integrates the Matrix Discrete Empirical Interpolation Method (MDEIM) and Discrete Empirical Interpolation Method (DEIM) with polynomial regression to efficiently manage geometric parametrization in lattice structures. Unlike traditional reduced order models (ROMs) that require extensive precomputed libraries for each geometric configuration, our approach enables continuous geometric variations through a flexible algebraic formulation, significantly reducing computational costs while preserving high accuracy. The method constructs projection matrices for individual unit cells that can be efficiently assembled into global systems, leveraging the repetitive nature of lattice structures. Numerical studies demonstrate that our EROM achieves displacement errors below 1% and von Mises stress prediction errors below 4%, coupled with computational speedups exceeding two orders of magnitude compared to full-order simulations. The proposed method's modularity and scalability make it particularly suitable for design optimization and real-time simulation of functionally graded lattice structures, with applications spanning aerospace to biomedical engineering.

11 - NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗