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At least 595 records · Page 33

Cryo-EM and MD infer water-mediated proton transport and autoinhibition mechanisms of V o complex

Rotary vacuolar adenosine triphosphatases (V-ATPases) drive transmembrane proton transport through a Vo proton channel subcomplex. Despite recent high-resolution structures of several rotary ATPases, the dynamic mechanism of proton pumping remains elusive. Here, we determined a 2.7-Å cryo–electron microscopy (cryo-EM) structure of yeast V o proton channel in nanodisc that reveals the location of ordered water molecules along the proton path, details of specific protein-lipid interactions, and the architecture of the membrane scaffold protein. Moreover, we uncover a state of V o that shows the c-ring rotated by ~14°. Molecular dynamics simulations demonstrate that the two rotary states are in thermal equilibrium and depict how the protonation state of essential glutamic acid residues couples water-mediated proton transfer with c-ring rotation. Our cryo-EM models and simulations also rationalize a mechanism for inhibition of passive proton transport as observed for free V o that is generated as a result of V-ATPase regulation by reversible disassembly in vivo.

59 BASIC BIOLOGICAL SCIENCES↗

Adiabatic Longitudinal Island Formation Due to Phase Modulation Using BLonD

The studies of adiabatic island generation through tracking near the quarter integer resonance and separately, through phase modulation was conducted using the accelerator code BLonD. Parameters from the Hadron Storage Ring (HSR) were used in the model. The demonstration of resonance island formation through phase modulation will help to understand this possible source of beam dilution during the store and further control of the bunch shaping. In this document, an algorithm to calculate the 5 th , 7 th , and N th order resonances is given, tracking results are presented, and the stable fixed point calculations with comparison to Poincaré contours are given.

43 PARTICLE ACCELERATORS↗

Magnetospheric-field distortions observed by OGO 3 and 5.

The rubidium vapor magnetometer data of the scalar magnetic-field intensity obtained by the OGO 3 and 5 satellites are analyzed to study the magnetospheric-field distortions in terms of the observed field magnitude under quiet and slightly disturbed conditions minus the magnitude of the reference geomagnetic field (delta B). Average contours of equal delta Bs are shown in the geomagnetic noon-midnight and dawn-dusk meridian planes for magnetically quiet and slightly disturbed conditions. The equatorial distribution of observed delta Bs as a function of geocentric distance differs substantially from that expected from the well-known models of the quiet-time ring current. Other findings suggest that there must be a population of low-energy particles with substantial total energy near the equator at distances of 2 to 5 earth radii that has not been recognized as having sufficient energy to inflate the magnetic field.

Sugiura, M.↗

Intrinsic polarization of SS 433 - An electron scattering model

A model for the generation of the observed intrinsic linear polarization in the optical radiation from SS 433 due to scattering from free electrons in highly ionized material in a jet or inclined disk is examined and compared with observational data. Expressions for the Stokes parameters of the linear polarization as a function of phase are obtained for a simple jet model in which continuum light from a point source is singly scattered by free electrons located along the jets resulting in strikingly different relations between Q and U at different values of model parameters. Comparison of 30 broadband linear polarization measurements with the model indicates a mean value of rotation axis inclination to the line of sight of 63 deg, which is not inconsistent with X-ray and radio data. The measurements are also compatible with models invoking highly inclined disks or rings with emission arising in regions on opposite sides of a diameter.

Mclean, I. S.↗

Outer satellite atmospheres: Their nature and planetary interactions

Modeling capabilities and initial model calculations are reported for the peculiar directional features of the Io sodium cloud discovered by Pilcher and the extended atomic oxygen atmosphere of Io discovered by Brown. Model results explaining the directional feature by a localized emission from the satellite are encouraging, but as yet, inconclusive; whereas for the oxygen cloud, an escape rate of 1 to 2 x 10 to the 27th power atoms/sec or higher from Io is suggested. Preliminary modeling efforts were also initiated for the extended hydrogen ring-atmosphere of Saturn detected by the Voyager spacecraft and for possible extended atmospheres of some of the smaller satellites located in the E-ring. Continuing research efforts reported for the Io sodium cloud include further refinement in the modeling of the east-west asymmetry data, the asymmetric line profile shape, and the intersection of the cloud with the Io plasma torus. In addition, the completed pre-Voyager modeling of Titan's hydrogen torus is included and the near completed model development for the extended atmosphere of comets is discussed.

Smyth, W. H.↗

Feedback stabilization and control of linear neutral systems

The first problem treated here is the realization and stabilization of linear neutral systems with discrete delays. It is shown that any autonomous linear neutral system with discrete delays is zero-state equivalent to an abstract linear system over a local ring of operators. Using the abstract model, the basic existence question for neutral realization is then settled. For general infinite dimensional linear systems, there is no precise analog of the finite dimensional state space isomorphism theorem. Because of this, the notion of spectral minimality must be introduced. For the case of single input-single output systems, realizations are obtained that are both minimal and spectrally minimal. Using the Cruz-Hale theory of stable D-operators, conditions are given that ensure that any poles introduced into the realization are strictly contained in the left half plane and indeed are characterized as characteristic values of the D-operator. The problem of the feedback stabilization of neutral systems is then considered using the abstract model. It is shown that, for neutral systems with commensurable delays and a stable D-operator in the sense of Cruz and Hale, Morses theorem (1976) on pole assignment over a PID implies stabilizability in the reachable case.

Tarn, T. J.↗

Modeling of rolling element bearing mechanics. Computer program user's manual

This report provides the user's manual for the Rolling Element Bearing Analysis System (REBANS) analysis code which determines the quasistatic response to external loads or displacement of three types of high-speed rolling element bearings: angular contact ball bearings, duplex angular contact ball bearings, and cylindrical roller bearings. The model includes the defects of bearing ring and support structure flexibility. It is comprised of two main programs: the Preprocessor for Bearing Analysis (PREBAN) which creates the input files for the main analysis program, and Flexibility Enhanced Rolling Element Bearing Analysis (FEREBA), the main analysis program. This report addresses input instructions for and features of the computer codes. A companion report addresses the theoretical basis for the computer codes. REBANS extends the capabilities of the SHABERTH (Shaft and Bearing Thermal Analysis) code to include race and housing flexibility, including such effects as dead band and preload springs.

Greenhill, Lyn M.↗

Modeling of rolling element bearing mechanics. Theoretical manual

This report documents the theoretical basis for the Rolling Element Bearing Analysis System (REBANS) analysis code which determines the quasistatic response to external loads or displacement of three types of high-speed rolling element bearings: angular contact ball bearings; duplex angular contact ball bearings; and cylindrical roller bearings. The model includes the effects of bearing ring and support structure flexibility. It is comprised of two main programs: the Preprocessor for Bearing Analysis (PREBAN) which creates the input files for the main analysis program; and Flexibility Enhanced Rolling Element Bearing Analysis (FEREBA), the main analysis program. A companion report addresses the input instructions for and features of the computer codes. REBANS extends the capabilities of the SHABERTH (Shaft and Bearing Thermal Analysis) code to include race and housing flexibility, including such effects as dead band and preload springs.

Merchant, David H.↗

New analysis of the Voyager UVS H Lyman-alpha emission of Saturn

The limb to limb Lyman-alpha reflectivities observed with the Voyager ultraviolet spectrometer (UVS) instruments during the fly-by of Saturn are reanalyzed using a revised H Lyman-alpha sensitivity for the Voyager 1 instrument. The new sensitivity reconciles the measured intensities to those of Voyager 2 and gives a coherent set of data. To fit the UV airglow observations, four sources are considered: (1) H resonance and H2 Rayleigh scattering of solar Lyman-alpha radiation, (2) the interplanetary Lyman-alpha radiation, (3) a possible internal source of unknown origin, (4) the possibility of atmospheric turbulence recently proposed to explain the Lyman-alpha bulge of Jupiter. The analysis supports neither a dominant collisional excitation source for the UV emissions nor the presence of strong atmospheric turbulence. The best fit, in terms of brightness but also in terms of shape of the limb to limb profile (that is to say independent on the absolute calibrations), is obtained for pure resonance and Rayleigh scattering of solar and interstellar wind line in an atmosphere enriched in atomic hydrogen up to three times the standard model. Influx of water from the rings of Saturn may provide a means for producing such enhanced H densities in the upper atmosphere.

Jaffel, L. Ben↗

Modeling the HD 32297 Debris Disk With Far-Infrared Herschel Data

HD 32297 is a young A-star (approx. 30 Myr) 112 pc away with a bright edge-on debris disk that has been resolved in scattered light. We observed the HD 32297 debris disk in the far-infrared and sub-millimeter with the Herschel Space Observatory PACS and SPIRE instruments, populating the spectral energy distribution (SED) from 63 to 500 micron..We aimed to determine the composition of dust grains in the HD 32297 disk through SED modeling, using geometrical constraints from the resolved imaging to break the degeneracies inherent in SED modeling. We found the best fitting SED model has two components: an outer ring centered around 110 AU, seen in the scattered light images, and an inner disk near the habitable zone of the star. The outer disk appears to be composed of grains>2 micron consisting of silicates, carbonaceous material, and water ice with an abundance ratio of 1:2:3 respectively and 90% porosity. These grains appear consistent with cometary grains, implying the underlying planetesimal population is dominated by comet-like bodies. We also discuss the 3.7 sigma detection of [C ii] emission at 158 micron with the Herschel PACS instrument, making HD 32297 one of only a handful of debris disks with circumstellar gas detected

infrared: stars↗

SMACK: A New Algorithm for Modeling Collisions and Dynamics of Planetesimals in Debris Disks

We present the Superparticle Model/Algorithm for Collisions in Kuiper belts and debris disks (SMACK), a new method for simultaneously modeling, in 3-D, the collisional and dynamical evolution of planetesimals in a debris disk with planets. SMACK can simulate azimuthal asymmetries and how these asymmetries evolve over time. We show that SMACK is stable to numerical viscosity and numerical heating over 10(exp 7) yr, and that it can reproduce analytic models of disk evolution. We use SMACK to model the evolution of a debris ring containing a planet on an eccentric orbit. Differential precession creates a spiral structure as the ring evolves, but collisions subsequently break up the spiral, leaving a narrower eccentric ring.

circumstellar matter↗

Global Effects of Transmitted Shock Wave Propagation Through the Earth's Inner Magnetosphere: First Results from 3-D Hybrid Kinetic Modeling

We use a new hybrid kinetic model to simulate the response of ring current, outer radiation belt, and plasmaspheric particle populations to impulsive interplanetary shocks. Since particle distributions attending the interplanetary shock waves and in the ring current and radiation belts are non-Maxwellian, waveparticle interactions play a crucial role in energy transport within the inner magnetosphere. Finite gyroradius effects become important in mass loading the shock waves with the background plasma in the presence of higher energy ring current and radiation belt ions and electrons. Initial results show that shocks cause strong deformations in the global structure of the ring current, radiation belt, and plasmasphere. The ion velocity distribution functions at the shock front, in the ring current, and in the radiation belt help us determine energy transport through the Earth's inner magnetosphere.

Lipatov, A. S.↗

Coherent transverse instability of bunched beams in circular accelerators

Coherent transverse oscillations of a bunch in a ring accelerator are considered. Three different models of the bunch are used: a hollow bunch in a square potential well, a square bunch in a parabolic potential well, and a parabolic bunch in a parabolic well. The bunch space-charge field, wakefield, and chromaticity are taken into account in all the cases. The bunch eigenmodes and various instabilities are studied. The results are compared and analyzed to establish the range of applicability of the models. Role of the Landau damping due to dependence of the SC field on the longitudinal coordinate is discussed.

43 PARTICLE ACCELERATORS↗

Variations in the infrared brightness temperature of Saturn's rings

After adjusting for the decreased Sun-Saturn distance and adjusting all measurements to B ring values only, it is shown that the temperature variations are not as large as was thought. Various models of the multilayer agglomerate of particles of Saturn's rings are evaluated. It is recommended that the difference between the 11 and 20 micron brightness temperatures should be explained by a satisfactory model.

Murphy, R. E.↗

A Mechanism-Based Reaction–Diffusion Model for Accelerated Discovery of Thermoset Resins Frontally Polymerized by Olefin Metathesis

Frontal ring-opening metathesis polymerization (FROMP) involves a self-perpetuating exothermic reaction, which enables the rapid and energy-efficient manufacturing of thermoset polymers and composites. Current state-of-the-art reaction–diffusion FROMP models rely on a phenomenological description of the olefin metathesis kinetics, limiting their ability to model the governing thermo-chemical FROMP processes. Furthermore, the existing models are unable to predict the variations in FROMP kinetics with changes in the resin composition and as a result are of limited utility toward accelerated discovery of new resin formulations. In this work, we formulate a chemically meaningful model grounded in the established mechanism of ring-opening metathesis polymerization (ROMP). Our study aims to validate the hypothesis that the ROMP mechanism, applicable to monomer-initiator solutions below 100 °C, remains valid under the nonideal conditions encountered in FROMP, including ambient to >200 °C temperatures, sharp temperature gradients, and neat monomer environments. Through extensive simulations, we demonstrate that our mechanism-based model accurately predicts the FROMP behavior across various resin compositions, including polymerization front velocities and thermal characteristics (e.g., T max ). Additionally, we introduce a semi-inverse workflow that predicts FROMP behavior from a single experimental data point. Notably, the physiochemical parameters utilized in our model can be obtained through DFT calculations and minimal experiments, highlighting the model’s potential for rapid screening of new FROMP chemistries in pursuit of thermoset polymers with superior thermo-chemo-mechanical properties.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Ring-Ringlet Interactions in Saturn's C Ring

The overall obejective of this work is to derive a theoretical model for the formation of gaps harboring isolated ringlets in order to explain the presence of such features in Saturn's C ring and Cassini division.

Saturn Cassini gravitational perturbations gap's e↗

Understanding Vibration Spectra of Planetary Gear Systems for Fault Detection

An understanding of the vibration spectra is very useful for any gear fault detection scheme based upon vibration measurements. The vibration measured from planetary gears is complicated. Sternfeld noted the presence of sidebands about the gear mesh harmonics spaced at the planet passage frequency in spectra measured near the ring gear of a CH-47 helicopter. McFadden proposes a simple model of the vibration transmission that predicts high spectral amplitudes at multiples of the planet passage frequency, for planetary gears with evenly spaced planets. This model correctly predicts no strong signal at the meshing frequency when the number of teeth on the ring gear is not an integer multiple of the number of planets. This paper will describe a model for planetary gear vibration spectra developed from the ideas started in reference. This model predicts vibration to occur only at frequencies that are multiples of the planet repetition passage frequency and clustered around gear mesh harmonics. Vibration measurements will be shown from tri-axial accelerometers mounted on three different planetary gear systems and compared with the model. The model correctly predicts the frequencies with large components around the first several gear mesh harmonics in measurements for systems with uniformly and nonuniformly spaced planet gears. Measurements do not confirm some of the more detailed features predicted by the model. Discrepancies of the ideal model to the measurements are believed due to simplifications in the model and will be discussed. Fault detection will be discussed applying the understanding will be discussed.

Mosher, Marianne↗

A Summary of Scatterometer Returns from Water Surfaces Agitated by Rain

In this paper, we summarize our initial findings from K(a)- and K(u)-band scatterometers which include: a scaling law for backscattered power as a function of rain rate; a linear superposition model for light rains and low wind speeds; evidence of the importance of scattering from rain-generated ring-waves; and progress towards development of a scattering model for computing normalized radar cross sections from wind and rain roughened water surfaces.

Bliven, Larry F.↗