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At least 595 records · Page 33

On the Reconstruction of Palaeo-Ice Sheets: Recent Advances and Future Challenges

Reconstructing the growth and decay of palaeo-ice sheets is critical to understanding mechanisms of global climate change and associated sea-level fluctuations in the past, present and future. The significance of palaeo-ice sheets is further underlined by the broad range of disciplines concerned with reconstructing their behaviour, many of which have undergone a rapid expansion since the 1980s. In particular, there has been a major increase in the size and qualitative diversity of empirical data used to reconstruct and date ice sheets, and major improvements in our ability to simulate their dynamics in numerical ice sheet models. These developments have made it increasingly necessary to forge interdisciplinary links between sub-disciplines and to link numerical modelling with observations and dating of proxy records. The aim of this paper is to evaluate recent developments in the methods used to reconstruct ice sheets and outline some key challenges that remain, with an emphasis on how future work might integrate terrestrial and marine evidence together with numerical modelling. Our focus is on pan-ice sheet reconstructions of the last deglaciation, but regional case studies are used to illustrate methodological achievements, challenges and opportunities. Whilst various disciplines have made important progress in our understanding of ice-sheet dynamics, it is clear that data-model integration remains under-used, and that uncertainties remain poorly quantified in both empirically-based and numerical ice-sheet reconstructions. The representation of past climate will continue to be the largest source of uncertainty for numerical modelling. As such, palaeo-observations are critical to constrain and validate modelling. State-of-the-art numerical models will continue to improve both in model resolution and in the breadth of inclusion of relevant processes, thereby enabling more accurate and more direct comparison with the increasing range of palaeo-observations. Thus, the capability is developing to use all relevant palaeo-records to more strongly constrain deglacial (and to a lesser extent pre-LGM) ice sheet evolution. In working towards that goal, the accurate representation of uncertainties is required for both constraint data and model outputs. Close cooperation between modelling and data-gathering communities is essential to ensure this capability is realised and continues to progress.

Ice sheet reconstruction↗

Omics-Lethal Human Viruses, Ebola Experiment EHUH002

The purpose of this experiment was to evaluate the human host response to Zaire Ebola wild-type virus and mutant virus infection. Samples were obtained from human hepatoma carcinoma cells (HUH-7) infected with Zaire Ebola ΔVP30-WT background for proteome, metabolome, and lipidome expression analysis. Secondary host-associated viral dataset downloads contain one or more statistically processed (normalization data transformation) quantitative dataset collections resulting in qualitative expression analyses of primary host-pathogen experimental study designs. Leveraging unique high-resolution Omics capabilities for proteomics, metabolomics, and lipidomics dataset downloads each have a direct relationship to a primary sample submission corresponding to a specific Ebola virus infection.

59 BASIC BIOLOGICAL SCIENCES↗

Omics-Lethal Human Viruses, Influenza A Experiment IM101

The purpose of this experiment was to evaluate the host mouse response to wild-type Influenza A/Vietnam/1203/2004 (H5N1) virus, Influenza A/California/04/2009 (H1N1) virus, and Influenza A/Vietnam/1203/2004 (H5N1; "PB2-627E" and "NS1trunc124") infection. Sample data was obtained from whole mouse lung and processed for transcriptomics expression analysis. Secondary host-associated viral dataset downloads contain one or more statistically processed (normalization data transformation) quantitative dataset collections resulting in qualitative expression analyses of primary host-pathogen experimental study designs. Transcriptomics dataset downloads have a direct relationship to a primary sample submission corresponding to a specific Influenza A virus host infection.

59 BASIC BIOLOGICAL SCIENCES↗

Omics-Lethal Human Viruses, West Nile Experiment WDC011

The purpose of this experiment was to evaluate the host response to wild-type West Nile virus (WNVMT) and mutant (WNVE218A) virus infection. Sample data was obtained from primary mouse myeloid dendritic cells for mRNA expression analysis. See Experiment WDC010 (GSE74628) for corresponding independent biological replicate study. Secondary host-associated viral dataset downloads contain one or more statistically processed (normalization data transformation) quantitative dataset collections resulting in qualitative expression analyses of primary host-pathogen experimental study designs. Transcriptomics dataset downloads have a direct relationship to a primary sample submission corresponding to a specific West Nile virus infection.

59 BASIC BIOLOGICAL SCIENCES↗

Occurrences of REE and CM in volcanic ash beds associated with coals in SW Wyoming & NW Colorado

Rare earth elements (REEs) and critical minerals (CMs) are vital components in the nation’s economy, national security, and the further strengthening of our renewable energy capabilities and infrastructure. Recent work has revealed more insight into previously unknown modes of occurrence for REEs, particularly in coal seams and adjacent noncoal sediments, but many data gaps persist. Temporal relationships between coal beds and adjacent tonstiens, ash beds, or other partings are widely recognized but not fully understood. Variations in REE concentration and their direct or indirect association with coal beds are not predictable. This study presents findings from examining lateral and potentially stratigraphic variation of REE and CM occurrences in coals of late Cretaceous and Paleocene age. In this study we collected and examined samples of differing ages both core and coal mine exposures for qualitative x-ray fluorescence (XRF), and multi-element geochemistry. Preliminary XRF data indicates variable levels of light REEs in a core from the Yampa coalfield of Moffat County in northwest Colorado. An absence of similar enrichments in slightly older coals in the Adaville Formation of the Fold and Thrust belt in southwest Wyoming is described from XRF and ICP-MS evaluation. Previous work has shown an association with the Yampa Bed and REE enrichment in coals of the Upper Cretaceous Williams Fork Formation. While not common and widespread, this association suggests that leaching or reworking of the ash bed could lead to elevated REEs in the adjacent coal. We investigate differences between the two data occurringas geologic compositions and post-depositional histories. In-depth petrography and precise geochemistry should reveal data that at the very least will help improve some aspects of the geologic models of coal basins and the effect of an influx of non-coal sediments.

REE, CM, ash, volcanic ash, coal↗

Omics-Lethal Human Viruses, Interferon-Stimulated Response Experiment IFNMVE001

The purpose of this experiment was to evaluate the human host interferon-stimulated cellular response to interferon alpha/beta (IFNα/β) or gamma (INFγ) treatment. Sample data was obtained from primary lung microvascular endothelial cells (MVE) treated with or without human IFNαβ or INFγ for mRNA transcriptome expression analysis. Secondary host-associated viral dataset downloads contain one or more statistically processed (normalization data transformation) quantitative dataset collections resulting in qualitative expression analyses of primary host-pathogen experimental study designs. Transcriptomics dataset download have a direct relationship to a primary sample submission corresponding to a specific interferon response to viral infection.

59 BASIC BIOLOGICAL SCIENCES↗

Assessment of Unsteady Propagation Characteristics and Corrections in Aeroacoustic Wind Tunnels Using an Acoustic Pulse

Two types of aeroacoustic wind tunnel test section configurations have been tested in the NASA Langley Quiet Flow Facility. The first is a more traditional open-jet configuration, where test section flow passes unbounded through the facility anechoic chamber. The second is the more recent Kevlar wall configuration, where a tensioned Kevlar sheet bounds the test section flow from the facility anechoic chamber. For both configurations, acoustic instrumentation is in the surrounding quiescent space. Both configurations are evaluated with a laser-based pulsed acoustic source, which provides unique capability for assessing the facility unsteady acoustic propagation characteristics. Metrics based on the wander and spread of the pulses are evaluated and show that measurements using Kevlar walls experience dramatically reduced unsteady effects when compared to the open-jet configuration. This leads to a corresponding improvement in coherence between microphones with the Kevlar configuration. Corrections for magnitude and phase for propagation through Kevlar as compared to open-jet propagation are calculated. While limitations in the experimental setup make quantitative analysis difficult, qualitative analysis shows Kevlar magnitude corrections similar to those determined in previous literature. Directivity effects beyond those already present for open-jet configurations are minimal. Phase corrections relative to open-jet configurations are indeterminate within the limitations of the experiment, though data suggest such corrections are not extreme. The background noise produced by the Kevlar is found to be its one drawback when compared with the open-jet configuration, showing significantly greater levels at high frequencies.

Bahr, Christopher↗

Evaluation of Gaseous Substrates for Microbial Immobilization of Contaminant Mixtures in Unsaturated Subsurface Sediments

Extensive vadose zone metals and organic contamination remains at many former industrial and defense manufacturing sites, and effective remedial solutions are needed to slow or prevent its migration to groundwater. In this study, the application of gaseous substrates to stimulate microbial respiratory reduction of comingled radioisotopes and nitrate under unsaturated conditions was examined for possible application at the Hanford Site, a former nuclear production facility in southeastern WA, USA. First, screening studies were performed to qualitatively measure the sediment respiratory response to 14 gaseous or volatile organic substrates at two moisture contents, 4% and 8%. Volatile substrates produced the strongest respiratory response, among them were butyrate, pentane, butyl acetate. Ethane and butane were the most effective gaseous substrates but only at 8% water content. Hanford sediment from two waste sites with distinctive chemistries were wetted to 7% moisture content, packed into columns, and treated with ethane or butane. After 4 weeks, columns were then leached to quantify retardation in the mobility of aqueous contaminant concentrations compared to no gas control columns. Treatment with both gases resulted in >80% removal of Cr from the aqueous phase. However, NO3 concentration and a waste sites exposure history to NO3 had a major effect on U and Tc reduction. Incomplete nitrate reduction outcompeted U and Tc in waste site sediments having limited prior exposure to NO3. Conversely, waste site sediments co-contaminated with NO3 were able to achieve highly reduced conditions resulting in complete denitrification of NO3, and delayed leaching of U and Tc. This implied effective reduction of both contaminants to less mobile species. This study demonstrates that unsaturated vadose sediments at Hanford waste sites have the capacity for a sustained respiratory response to gaseous substrate injection, which could potentially be deployed as part of an overall strategy to reduce the flux of long-lived radionuclides to groundwater at Hanford and other legacy waste sites.

Bagwell, Christopher E.↗

Evaluation of Anomaly Detection Capability for Ground-Based Pre-Launch Shuttle Operations

This chapter will provide a thorough end-to-end description of the process for evaluation of three different data-driven algorithms for anomaly detection to select the best candidate for deployment as part of a suite of IVHM (Integrated Vehicle Health Management) technologies. These algorithms were deemed to be sufficiently mature enough to be considered viable candidates for deployment in support of the maiden launch of Ares I-X, the successor to the Space Shuttle for NASA's Constellation program. Data-driven algorithms are just one of three different types being deployed. The other two types of algorithms being deployed include a "nile-based" expert system, and a "model-based" system. Within these two categories, the deployable candidates have already been selected based upon qualitative factors such as flight heritage. For the rule-based system, SHINE (Spacecraft High-speed Inference Engine) has been selected for deployment, which is a component of BEAM (Beacon-based Exception Analysis for Multimissions), a patented technology developed at NASA's JPL (Jet Propulsion Laboratory) and serves to aid in the management and identification of operational modes. For the "model-based" system, a commercially available package developed by QSI (Qualtech Systems, Inc.), TEAMS (Testability Engineering and Maintenance System) has been selected for deployment to aid in diagnosis. In the context of this particular deployment, distinctions among the use of the terms "data-driven," "rule-based," and "model-based," can be found in. Although there are three different categories of algorithms that have been selected for deployment, our main focus in this chapter will be on the evaluation of three candidates for data-driven anomaly detection. These algorithms will be evaluated upon their capability for robustly detecting incipient faults or failures in the ground-based phase of pre-launch space shuttle operations, rather than based oil heritage as performed in previous studies. Robust detection will allow for the achievement of pre-specified minimum false alarm and/or missed detection rates in the selection of alert thresholds. All algorithms will also be optimized with respect to an aggregation of these same criteria. Our study relies upon the use of Shuttle data to act as was a proxy for and in preparation for application to Ares I-X data, which uses a very similar hardware platform for the subsystems that are being targeted (TVC - Thrust Vector Control subsystem for the SRB (Solid Rocket Booster)).

Martin, Rodney Alexander↗

High-Yield Room-Temperature Aryl 211 At Radiolabeling via Redox-Activated Column-Shipped 211 At

Efficient late-stage formation of aryl– 211 At bonds is relevant to expanding the scope of targeted α-therapy radiopharmaceuticals. In this work, a catalyst-enabled astatodeboronation approach is evaluated using wet chemically regenerated 211 At recovered from shipped 3-octanone-impregnated columns. A series of aryl boronic esters bearing electron-donating and electron-withdrawing substituents were radiolabeled under mild conditions, with reaction parameters examined through time-dependent studies. Radiochemical conversions ranging from 68–97% were observed across the substrate set. Density functional theory calculations were employed as a qualitative framework to contextualize relative B–C and At–C bonding descriptors. Overall, this study demonstrates that wet chemically regenerated 211 At can be applied to the late-stage labeling of aryl boronic esters under mild conditions and provides guidance for future exploration of 211 At radiolabeling strategies.

211At-aryl labeling↗

Gray two-moment neutrino transport: Comprehensive tests and improvements for supernova simulations

Aims. In this work we extended an energy-integrated neutrino transport method to facilitate efficient, yet precise, modeling of compact astrophysical objects. We particularly focus on core-collapse supernovae. Methods. We implemented a gray neutrino-transport framework from the literature into FLASH and performed a detailed evaluation of its accuracy in core-collapse supernova simulations. Based on comparisons with results from simulations using energy-dependent neutrino transport, we incorporated several improvements to the original scheme. Results. Our analysis shows that our gray neutrino transport method successfully reproduces key aspects from more complex energy-dependent transport across a variety of progenitors and equations of state. We find both qualitative and reasonable quantitative agreement with multi-group M1 transport simulations. However, the gray scheme tends to slightly favor shock revival. In terms of gravitational wave and neutrino signals, there is a good alignment with the energy-dependent transport, although we find 15–30% discrepancies in the average energy and luminosity of heavy-lepton neutrinos. Simulations using the gray transport are around four times faster than those using energy-dependent transport.

Astronomy & Astrophysics↗

Omics-Lethal Human Viruses, West Nile Experiment WDC010

The purpose of this experiment was to evaluate the host response to wild-type West Nile virus (WNVMT) and mutant (WNVE218A) virus infection. Sample data was obtained from primary mouse myeloid dendritic cells for mRNA and proteomics expression analysis. See Experiment WDC011 (GSE75222) for corresponding independent biological replicate study. Secondary host-associated viral dataset downloads contain one or more statistically processed (normalization data transformation) quantitative dataset collections resulting in qualitative expression analyses of primary host-pathogen experimental study designs. Leveraging unique high-resolution Omics capabilities for proteomics and transcriptomics, each dataset download has a direct relationship to a primary sample submission corresponding to a specific West Nile virus infection.

59 BASIC BIOLOGICAL SCIENCES↗

Calculation of the Frequency Distribution of the Energy Deposition in DNA Volumes by Heavy Ions

Radiation quality effects are largely determined by energy deposition in small volumes of characteristic sizes less than 10 nm representative of short-segments of DNA, the DNA nucleosome, or molecules initiating oxidative stress in the nucleus, mitochondria, or extra-cellular matrix. On this scale, qualitatively distinct types of molecular damage are possible for high linear energy transfer (LET) radiation such as heavy ions compared to low LET radiation. Unique types of DNA lesions or oxidative damages are the likely outcome of the energy deposition. The frequency distribution for energy imparted to 1-20 nm targets per unit dose or particle fluence is a useful descriptor and can be evaluated as a function of impact parameter from an ions track. In this work, the simulation of 1-Gy irradiation of a cubic volume of 5 micron by: 1) 450 (1)H(+) ions, 300 MeV; 2) 10 (12)C(6+) ions, 290 MeV/amu and 3) (56)Fe(26+) ions, 1000 MeV/amu was done with the Monte-Carlo simulation code RITRACKS. Cylindrical targets are generated in the irradiated volume, with random orientation. The frequency distribution curves of the energy deposited in the targets is obtained. For small targets (i.e. <25 nm size), the probability of an ion to hit a target is very small; therefore a large number of tracks and targets as well as a large number of histories are necessary to obtain statistically significant results. This simulation is very time-consuming and is difficult to perform by using the original version of RITRACKS. Consequently, the code RITRACKS was adapted to use multiple CPU on a workstation or on a computer cluster. To validate the simulation results, similar calculations were performed using targets with fixed position and orientation, for which experimental data are available [5]. Since the probability of single- and double-strand breaks in DNA as function of energy deposited is well know, the results that were obtained can be used to estimate the yield of DSB, and can be extended to include other targeted or non-target effects.

Plante, Ianik↗

Testing and evaluation of a stall-flutter-suppression system for helicopter rotors using individual-blade-control

The development and testing of a feedback system designed to alleviate the violent blade first torsion mode oscillations associated with stall flutter are described. The system, based on previously developed M.I.T. Individual-Blade-Control hardware, employs blade-mounted accelerometers to sense torsional oscillations and feeds back rate informaton to increase the damping of the first torsion mode. A linear model of the blade and control system dynamics is developed and is used to give qualitative and quantitative guidance in the design process as well as to aid in analysis of experimental results. System performance in wind tunnel tests, both in hover and forward flight, is described, and evidence is given of the system's ability to provide substantial additional damping to stall-induced blade oscillations.

Quackenbush, T. R.↗

Monte Carlo Simulation and Reconstruction: Assessment of Myocardial Perfusion Imaging of Tracer Dynamics With Cardiac Motion Due to Deformation and Respiration Using Gamma Camera With Continuous Acquisition

Purpose: Myocardial perfusion imaging (MPI) with single photon emission computed tomography (SPECT) is routinely used for stress testing in nuclear medicine. Recently, our group extended its potential going from 3D visual qualitative image analysis to 4D spatiotemporal reconstruction of dynamically acquired data to capture the time variation of the radiotracer concentration and the estimated myocardial blood flow (MBF) and coronary flow reserve (CFR). However, the quality of reconstructed image is compromised due to cardiac deformation and respiration. The work presented here develops an algorithm that reconstructs the dynamic sequence of separate respiratory and cardiac phases and evaluates the algorithm with data simulated with a Monte Carlo simulation for the continuous image acquisition and processing with a slowly rotating SPECT camera. Methods: A clinically realistic Monte Carlo (MC) simulation is developed using the 4D Extended Cardiac Torso (XCAT) digital phantom with respiratory and cardiac motion to model continuous data acquisition of dynamic cardiac SPECT with slowly rotating gamma cameras by incorporating deformation and displacement of the myocardium due to cardiac and respiratory motion. We extended our previously developed 4D maximum-likelihood expectation-maximization (MLEM) reconstruction algorithm for a data set binned from a continuous list mode (LM) simulation with cardiac and respiratory information. Our spatiotemporal image reconstruction uses splines to explicitly model the temporal change of the tracer for each cardiac and respiratory gate that delineates the myocardial spatial position as the tracer washes in and out. Unlike in a fully list-mode data acquisition and reconstruction the accumulated photons are binned over a specific but very short time interval corresponding to each cardiac and respiratory gate. Reconstruction results are presented showing the dynamics of the tracer in the myocardium as it continuously deforms. These results are then compared with the conventional 4D spatiotemporal reconstruction method that models only the temporal changes of the tracer activity. Mean Stabilized Activity (MSA), signal to noise ratio (SNR) and Bias for the myocardium activities for three different target-to-background ratios (TBRs) are evaluated. Dynamic quantitative indices such as wash-in (K1) and wash-out (k2) rates at each gate were also estimated. Results: The MSA and SNR are higher with higher TBRs while biases were improved with higher TBRs to less than 10%. The correlation between exhalation-inhalation sequence with the ground truth during respiratory cycle was excellent. Our reconstruction method showed better resolved myocardial walls during diastole to systole as compared to the ungated 4D image. Estimated values of K1 and k2 were also consistent with the ground truth. Conclusion: The continuous image acquisition for dynamic scan using conventional two-head gamma cameras can provide valuable information for MPI. Our study demonstrated the viability of using a continuous image acquisition method on a widely used clinical two-head SPECT system. Our reconstruction method showed better resolved myocardial walls during diastole to systole as compared to the ungated 4D image. Precise implementation of reconstruction algorithms, better segmentation techniques by generating images of different tissue types and background activity would improve the feasibility of the method in real clinical environment.

60 APPLIED LIFE SCIENCES↗

TEXSYS

The Systems Autonomy Demonstration Project has recently completed a major test and evaluation of TEXSYS, a knowledge-based system (KBS) which demonstrates real-time control and FDIR for the Space Station Freedom thermal control system test-bed. TEXSYS is the largest KBS ever developed by NASA and offers a unique opportunity for the study of technical issues associated with the use of advanced KBS concepts including: model-based reasoning and diagnosis, quantitative and qualitative reasoning, integrated use of model-based and rule-based representations, temporal reasoning, and scale-up performance issues. TEXSYS represents a major achievement in advanced automation that has the potential to significantly influence Space Station Freedom's design for the thermal control system. An overview of the Systems Autonomy Demonstration Project, the thermal control system test-bed, the TEXSYS architecture, preliminary test results, and thermal domain expert feedback are presented.

Bull, John↗

An Evaluation of an Analytical Simulation of an Airplane with Tailplane Icing by Comparison to Flight Data

This report presents the assessment of an analytical tool developed as part of the NASA/FAA Tailplane Icing Program. The analytical tool is a specialized simulation program called TAILSM4 which was developed to model the effects of tailplane icing on the flight dynamics Twin Otter Icing Research Aircraft. This report compares the responses of the TAILSIM program directly to flight test data. The comparisons should be useful to potential users of TAILSIM. The comparisons show that the TAILSIM program qualitatively duplicates the flight test aircraft response during maneuvers with ice on the tailplane. TAILSIM is shown to be quantitatively "in the ballpark" in predicting when Ice Contaminated Tailplane Stall will occur during pushover and thrust transition maneuvers. As such, TAILSIM proved its usefulness to the flight test program by providing a general indication of the aircraft configuration and flight conditions of concern. The aircraft dynamics are shown to be modeled correctly by the equations of motion used in TAILSIM. However, the general accuracy of the TAILSIM responses is shown to be less than desired primarily due to inaccuracies in the aircraft database. The high sensitivity of the TAILSIM program responses to small changes in load factor command input is also shown to be a factor in the accuracy of the responses. A pilot model is shown to allow TAILSIM to produce more accurate responses and contribute significantly to the usefulness of the program. Suggestions to improve the accuracy of the TAILSIM responses are to further refine the database representation of the aircraft aerodynamics and tailplane flowfield and to explore a more realistic definition of the pilot model.

Hiltner, Dale W.↗

Modal dynamics of wind turbine wake meandering from lidar observations

Horizontal scans from nacelle-mounted lidars provide time series measurements of wind turbine wakes across diverse atmospheric conditions, enabling analysis of coherent turbulent structures that influence wake meandering through proper orthogonal decomposition (POD). While low-order modes capture the most energetic turbulent structures, our analysis reveals that they do not necessarily dominate wake meandering dynamics. We evaluate more than 16,000 combinatorial reconstructions of the flow field for each inflow case, demonstrating that mode relevance depends on mode symmetry, turbulent kinetic energy content, and inflow characteristics. Cases with low turbulence intensity and large integral timescales show stronger correlations between POD modes and wake meandering, whereas higher turbulence conditions (turbulence intensity > 7%) are less effectively described by reduced-order models. However, the qualitative similarity of POD modes across varied atmospheric conditions suggests the potential existence of a semi-universal basis for representing wind turbine wakes, with implications for improving engineering wake models.

17 WIND ENERGY↗