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At least 595 records · Page 33
All sourcesNASA NTRSDOE OSTI
DOE OSTI2025

The temporal onset of associations of cortical proteins with cognitive resilience vary during late life

Background: Cortical proteins associated with cognitive resilience have been identified but their temporal onset in older adults is unknown. We present a multistage approach to first identify cortical proteins associated with cognitive resilience and then examine their associated temporal onset. Methods: We used data from a subset of 1088 decedents from two cohort-studies who had selected reaction monitoring proteomics from the dorsolateral prefrontal cortex, and at least 3 cognitive assessments. Cognition was assessed using a composite derived from 19 tests. We first used linear mixed-effects models to identify cortical proteins associated with cognitive resilience. We then used functional mixed-effects models to examine non-linear associations between proteins and cognitive resilience to identify their temporal onset. Results: Mean age at death was 90 years (SD = 6.4); 69 % were female. On average, cognition started to decline at around 15 years before death, with accelerated decline in the last 7 years. We identified 40 proteins associated with cognitive resilience, of which 17 proteins also showed non-linear associations. Non-linear associations indicated that higher levels of 10 proteins were associated with slower cognitive decline between 23 and 4 years before death. In contrast, higher levels of 7 proteins were associated with faster decline only within the last 7 years before death. Conclusions: Cognitive resilience proteins are differentially related to late-life cognitive aging; the onset of proteins that maintain cognition may begin many years before the onset of proteins that hasten cognitive decline. The temporal onset of cognitive resilience proteins may be crucial for timing efficacious interventions.

Zammit, Andrea↗
DOE OSTI2023

Batched Sparse Linear Algebra (Final Report for Subcontract B648960)

This report finalizes design specifications for developing batched kernels for small tensor operations for unassembled matrix-free iterative solvers, batched solvers for partially assembled operators, and batched solvers with support for various sparse formats. The outcome of the project milestones is a set of interfaces to Batched Sparse LA solvers running on hardware accelerators for use in ECP Libraries and Applications. It is part of the development of sparse batched kernels, solvers/preconditioners as well as creating interoperability in xSDK libraries with sparse and dense batched functions to benefit ECP applications. The participants included representatives from ECP libraries (not limited to the xSDK project), applications, and vendors (AMD, Intel, and NVIDIA). Batched sparse linear algebra solvers form the new frontier for algorithmic development and performance engineering. Many applications (ECP and non-ECP alike) require simultaneous solutions of small linear systems of equations that are structurally sparse. To move towards high hardware utilization, it is important to provide these applications with appropriate interfaces to efficient batched sparse solvers running on modern hardware accelerators. We present interface designs in use by HPC software libraries supporting batched sparse linear algebra and the development of sparse batched kernel codes for solvers and preconditioners. We also address the potential interoperability opportunities to keep the software portable between the major hardware accelerators from AMD, Intel, and NVIDIA. The presented interface specifications includes batched band, sparse iterative, and sparse direct solvers. This report summarizes progress in Kokkos Kernels and the xSDK libraries MAGMA, Ginkgo, hypre, SUNDIALS, and SuperLU_dist.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2022

Characterization and alignment of a resonant cavity beam position monitor for the Compact LInear Collider (CLIC) project at CERN

Beam diagnostic devices are essential tools to sense the properties of the beam in particle accelerators. Beam Position Monitors (BPMs) are used to detect the transverse beam spatial coordinates. A large number of high-resolution resonant cavity BPMs, operating at 14GHz, are proposed to monitor the orbit of the two main beam linacs of the CLIC project. This paper discusses innovative calibration techniques on a dedicated test bench in the frame of the PACMAN project. The particular location of the electromagnetic center of the resonant cavity BPM is detected utilizing a stretched-wire measurement approach. Measurements, RF characterization and final fiducialization of the BPM electrical offset are treated with details. Initial studies through EM simulations of the cavity BPM are covered. The presented experimental results prove the feasibility of the alignment methodology with nanometric resolution.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗
DOE OSTI2026

SAIGE-GPU: accelerating genome- and phenome-wide association studies using GPUs

Genome-wide association studies (GWAS) at biobank scale are computationally intensive, especially for admixed populations requiring robust statistical models. SAIGE is a widely used method for generalized linear mixed-model GWAS but is limited by its CPU-based implementation, making phenome-wide association studies impractical for many research groups. We developed SAIGE-GPU, a GPU-accelerated version of SAIGE that replaces CPU-intensive matrix operations with GPU-optimized kernels. The core innovation is distributing genetic relationship matrix calculations across GPUs and communication layers. Applied to 2068 phenotypes from 635 969 participants in the Million Veteran Program, including diverse and admixed populations, SAIGE-GPU achieved a 5-fold speedup in mixed model fitting on supercomputing infrastructure and cloud platforms. We further optimized the variant association testing step through multi-core and multi-trait parallelization. Deployed on Google Cloud Platform and Azure, the method provided substantial cost and time savings. Source code and binaries are available for download at https://github.com/saigegit/SAIGE/tree/SAIGE-GPU-1.3.3. A code snapshot is archived at Zenodo for reproducibility (DOI: [10.5281/zenodo.17642591]). SAIGE-GPU is available in a containerized format for use across HPC and cloud environments and is implemented in R/C++ and runs on Linux systems.

Rodriguez, Alex [Argonne National Laboratory (ANL)↗
DOE OSTI2021

Linear stability analysis of two fluid columns of different densities and viscosities in a gravity field

The linear stability of a vertical interface separating two miscible fluid columns of different densities and viscosities under the influence of gravity is investigated. This flow possesses a time-dependent reference state (each column accelerates at different rates owing to their different densities) and the interface thickness grows as the square root of time (by diffusion). Numerical integration of the linear initial-value problem is carried out and discussed in detail as a function of vertical and spanwise wavenumbers and the flow parameters. Adjoint-based optimization is performed in order to determine initial conditions that lead to maximum growth of disturbances in finite time. Results indicate that the rate of growth of the perturbation energy at small wavenumbers (less affected by viscosity initially) is dominated by two-dimensional modes (no spanwise variation). Substantial transient growth is observed at higher wave modes initially, followed by asymptotic decay of the perturbations at large time. Sensitivity of perturbation growth with respect to initial time, density and viscosity ratios is investigated. This work is complementary to previous inviscid analysis of this configuration, which showed that the interface was unconditionally unstable at all wave modes, even in the presence of surface tension, and that instability grew as the exponential of time squared.

Mechanics↗
DOE OSTI2023

Accelerators for Electroweak Physics and Higgs Boson Studies

We discuss the goals, the designs, the state of technical readiness, and the critical R&D needs of the accelerators that are currently under discussion as Higgs and electroweak factories. We also address the respective staging options enabling future energy-frontier colliders. The accelerators covered are based on many different techniques and approaches. They include several circular colliders, various linear colliders, colliders based on energy recovery linacs (ERLs), ERL-ring combinations, as well as γγ colliders. The linear colliders proposed consist of options for the International Linear Collider (ILC), for the Compact Linear Collider (CLIC), for the Cold Copper Collider (C 3 ), and for the more recent Higgs-Energy Lepton Collider (HELEN). ERLs are key components of the Recycling Linear e + e - Collider (ReLiC),of the Energy Recovery Linear Collider (ERLC), and of the Circular Energy Recovery Collider (CERC). Among the more conventional ring colliders the following proposals are featured: the Future Circular Collider (FCC-ee), the Circular Electron Positron Collider (CEPC), the Electron Positron Circular Collider at Fermilab (EPCCF), and the Large Electron Positron collider #3 (LEP-3). In addition, we consider the X-ray FEL based gamma- gamma Collider Higgs Factory (XCC) and the High-Energy High-Luminosity γ-γ collider (HE&HL γγ). Finally, a Higgs factory based on a circular muon collider is mentioned for completeness.

43 PARTICLE ACCELERATORS↗
DOE OSTI2022

Development and Operation of PIP-II Injector Test, SSR1 Cryomodule, 325 MHz Amplifiers

The PIP-II Injector Test (PIP2IT) has successfully accelerated ionized hydrogen up to 17MeV through a superconducting, single spoke resonator (SSR1) cryomodule at Fermi National Accelerator Laboratory (FNAL). Each of the SSR1 cavities is tuned to 325MHz and requires up to 6 kW of RF power to accelerate 2mA of ionized hydrogen at the design gradients. RF power amplifiers, specialized for SRF cavity beam operations, were designed by Bhabha Atomic Research Center (BARC) and constructed in a collaboration between the BARC in Mumbai, India and the Electronics Corporation of India Limited (ECIL) in Hyderabad, India. The RF amplifiers meet the specifications and requirements mutually approved between BARC and FNAL. They operate at 325 MHz with a linear power output of 7 kW in both CW and pulse mode. The amplifiers are compatible with the FNAL accelerator personnel safety system and the cavity protection interlocks. Access to controls and internal diagnostic instrumentation are compatible with EPICS control standards. This paper gives details about RF power amplifier development within the Department of Atomic Energy (DAE), India and the operational details with PIP2IT at FNAL.

43 PARTICLE ACCELERATORS↗
DOE OSTI2022

Electron Accelerator Lattice Design for LHeC with Permanent Magnets

We present a new ’green energy’ approach to the Energy Recovery Linac (ERL) the future Electron Ion Collider at LHeC using single beam line made of very strong focusing combined function permanent magnets and the Fixed Field Alternating Linear Gradient (FFA-LG) principle. We are basing our design on recent very successful commissioning results of the Cornell University and Brookhaven National Laboratory ERL Test Accelerator-CBETA.

Trbojevic, D.↗
DOE OSTI2024

A Performance and Energy Study of GPU-Resident Preconditioners for Conjugate Gradient Solvers: In the Context of Existing and Novel Approaches

Optimizing a particular subprogram out of the set of Basic (sparse) Linear Algebra Subprograms (BLAS) for a given architecture is a common topic of research. In applications, however, these BLAS functions rarely appear in isolation; usually, many of them are used together, in various combinations and with varying inputs. As the need to solve a large, sparse linear system is ubiquitous throughout HPC applications, linear solvers constitute a realistic, sufficiently complex and well-defined representative use case for composite BLAS routines. To this end, based on a representative set of matrices drawn from a diverse set of fields, we present a framework to study, from the performance and energy perspective, the efficacy of GPU- resident parallel Conjugate Gradient (CG) linear solver with different preconditioner options, including Gauss-Seidel, Jacobi, and incomplete Cholesky. We also propose a novel GPU-based preconditioner, in which the triangular solves are approximated by an iterative process. The development of this preconditioner was motivated by solving large graph Laplacian linear systems, for which the existing preconditioners either perform slow on GPU-based platforms or are not applicable. We compare the performance of these preconditioners on different hardware accelerator architectures, i.e., AMD MI250X, MI100, Nvidia A100, V100, and Jetson. Our experiments reveal performance trade-offs and provide information on how to select the best strategy for the given linear system, dictated by its properties, and the platform of interest. We demonstrate the application of our novel preconditioner for solving CG and graph Laplacian systems. Overall, the framework can be utilized as a benchmark to guide informed decisions in choosing a specific preconditioner, i.e., whether it is better to rely on the performance of a triangular solver or on the performance of sparse matrix-vector product. Finally, by considering power consumption to solve the linear systems, we report the energy footprint for the solvers.

Preconditioned Conjugate Gradient, GPUs, iterative↗
DOE OSTI2021

Evaluation of Low Cost Infrasound Sensor Packages

Sandia National Laboratories has tested and evaluated the performance of the following five models of low-cost infrasound sensors and sensor packages: Camas microphone, Gem Infrasound Logger, InfraBSU sensor, Raspberry Boom, and the Samsung S10 smartphone utilizing the Redvox app. The purpose of this infrasound sensor evaluation is to measure the performance characteristics in such areas as power consumption, sensitivity, self-noise, dynamic range, response, passband, linearity, sensitivity variation due to changes in static pressure and temperature, and sensitivity to vertical acceleration. The infrasound monitoring community has leveraged such sensors and integrated packages in novel ways; better understanding the performance of these units serves the geophysical monitoring community.

42 ENGINEERING↗
DOE OSTI2022

The International Linear Collider (Report to Snowmass 2021)

The International Linear Collider (ILC) is on the table now as a new global energy-frontier accelerator laboratory taking data in the 2030s. The ILC addresses key questions for our current understanding of particle physics. It is based on a proven accelerator technology. Its experiments will challenge the Standard Model of particle physics and will provide a new window to look beyond it. This document brings the story of the ILC up to date, emphasizing its strong physics motivation, its readiness for construction, and the opportunity it presents to the US and the global particle physics community.

43 PARTICLE ACCELERATORS↗
DOE OSTI2024

Threshold charmonium photoproduction with GlueX

We report the total and differential cross sections for J/ψ photoproduction obtained using the large acceptance GlueX spectrometer at the 12 GeV JLab accelerator over the full near-threshold kinematic region. The GlueX experiment uses tagged linearly-polarized photon beam from coherent Bremsstrahlung off a thin diamond. Charmonium photoproduction near threshold, under certain assumptions including gluon exchange and factorization, can be used to study important aspects of the gluon structure of the proton, such as the gluon GPD, the gravitational form factors, the mass radius of the proton, and the anomalous contribution to the proton mass. In the measured cross sections we find evidence for possible contributions beyond gluon exchange. The results are compared to a wide range of theoretical predictions including GPD calculations and models with open-charm intermediate states. Photoproduction near threshold of charmonium states with opposite-to-photon parity offer another opportunity, complementary to the J/ψ, to understand the reaction mechanism of the charmonium photoproduction. While we see some evidence for such states, comprehensive studies of such higher-mass charmonia can be done only with the proposed JLab energy upgrade. An electron beam energy of up to 22 GeV significantly increases the photon flux and polarization in the corresponding threshold regions allowing for precise cross section and polarization measurements there.

Pentchev, Lubomir↗
DOE OSTI2024

Initial PIP-II Beam Current Monitor Fault Case Analyses & Beam Position Monitor Linearity Studies in CST Studio Suite

The use of non-invasive sensors & systems to measure particle beam characteristics is a crucial part of modern accelerator control systems due to their ability to return real time beam data while minimizing negative effects on beam quality. To ensure that one can be reasonably confident these sensors will behave as desired upon be-ing implemented within the beamline, simulations pre-dicting the performance of these sensors under beamline conditions can be used as a valuable tool for checking sensor functionality without a physical test bench. This paper details the design, testing, and results of two sensor models developed using CST Studio Suite soft-ware designed to mimic two sensors to be implemented within the PIP-III beamline: an elliptical, large-aperture beam position monitor (BPM) for which vertical & hori-zontal position signal linearity was analyzed, and an AC current transformer (ACCT) beam current monitor (BCM) used to search for potential fault cases within the BCM and beam pipe flange gaps. Special focus is given to the discovery of linearity variations within the BPM and the use of frequency domain techniques in the BCM fault case analyses.

Rouzky, A. R.↗
DOE OSTI2022

Considerations for a TeV collider based on dielectric laser accelerators

Particle acceleration in dielectric microstructures powered by infrared lasers, or "dielectric laser acceleration" (DLA), is a promising area of advanced accelerator research with the potential to enable more affordable and higher-gradient accelerators for energy frontier science and a variety of other applications. DLA leverages well-established industrial fabrication capabilities and the commercial availability of tabletop lasers to reduce cost, with axial accelerating fields in the GV/m range. Further, desirable luminosities would be obtained by operating with very low charge per bunch but at extremely high repetition rates. And as a consequence of its unique operating parameter regime, coupling of the laser to the accelerator can potentially be in the 50% range and with low beamstrahlung energy loss due at the interaction point, making DLA a promising approach for a future multi-TeV linear collider.

43 PARTICLE ACCELERATORS↗
DOE OSTI2025

Leveraging operator learning to accelerate convergence of the preconditioned conjugate gradient method

We propose a new deflation strategy to accelerate the convergence of the preconditioned conjugate gradient (PCG) method for solving parametric large-scale linear systems of equations. Unlike traditional deflation techniques that rely on eigenvector approximations or recycled Krylov subspaces, we generate the deflation subspaces using operator learning, specifically the Deep Operator Network (DeepONet). To this aim, we introduce two complementary approaches for assembling the deflation operators. The first approach approximates near-null space vectors of the discrete PDE operator using the basis functions learned by the DeepONet. The second approach directly leverages solutions predicted by the DeepONet. To further enhance convergence, we also propose several strategies for prescribing the sparsity pattern of the deflation operator. Here, a comprehensive set of numerical experiments encompassing steady-state, time-dependent, scalar, and vector-valued problems posed on both structured and unstructured geometries is presented and demonstrates the effectiveness of the proposed DeepONet-based deflated PCG method, as well as its generalization across a wide range of model parameters and problem resolutions.

Deflation↗
DOE OSTI2022

Projecting Stratocumulus Transitions on the Albedo—Cloud Fraction Relationship Reveals Linearity of Albedo to Droplet Concentrations

Satellite images show solid marine stratocumulus cloud decks (Sc) that break up over the remote oceans. The Sc breakup is initiated by precipitation and is accompanied by a strong reduction in the cloud radiative effect. Aerosol has been shown to delay the Sc breakup by postponing the onset of precipitation, however its climatic effect is uncertain. Here we introduce a new approach that allows us to re-cast currently observed cloud cover and albedo to their counterfactual cleaner world, enabling the first estimate of the radiative effect due to delayed cloud breakup. Using simple radiative approximation, the radiative forcing with respect to pre-industrial times due to delayed Sc breakup is –0.39 W m –2 . The radiative effect changes nearly linearly with aerosol due to the droplet concentration control on the cloud cover, suggesting a potentially accelerated warming if the current trend of reduction in aerosol emissions continues.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2023

Partial Wave Analysis of Strange Mesons Decaying to K+p+p- in the Reaction ¿p ¿ K+p+p-¿(1520) and the Commissioning of the GlueX DIRC Detector

Hadron spectroscopy is a cornerstone of our understanding of the strong nuclear interactions. Studying the hadron spectrum led to the postulation of quarks and gluons, and the development of Quantum Chromodynamics (QCD), the theory of the strong nuclear force. Today hadron spectroscopy provides an important test of QCD, particularly in the non-perturbative energy regime. One such test is the existence of hybrid hadrons that have gluonic degrees of freedom, e.g. q ?qg states, that are allowed by QCD but have remained elusive in experimental searches. The GlueX experiment located at Thomas Jefferson National Accelerator Facility, is designed to map the light meson spectrum, including hybrid mesons, produced by a linearly polarized photon beam that is scattered off of a liquid hydrogen target. This dissertation concerns the installation and commissioning of the GlueX DIRC upgrade and the analysis of three reactions measured by the GlueX experiment. The GlueX DIRC is a particle identification detector installed as an upgrade to the GlueX experiment in 2019 to improve the experiment?s ability to distinguish pions and kaons. The DIRC uses Cherenkov photons radiated by charged particles that travel faster than the speed of light in the detector medium to determine the velocity of said particles. The velocity measurement is used in conjunction with momentum measurements from other detectors to determine the mass of the particle. The DIRC will be essential to the future of strange meson spectroscopy in GlueX. The reactions ?p ? K+K??+??p, ?p ? K+K??0?0p, ?p ? K+K??0?p were initially chosen for this analysis to search for the hybrid meson candidate ?(2170) and related resonances. The ?(2170) has been observed in e+e? collider experiments decaying to K+K??+?? and K+K??0?0, among other final states. The ?(2170) was not observed in this analysis. The reaction ?p ? K+?+???(1520), a subset of the ?p ? K+K??+??p reaction, was analyzed with a Partial Wave Analysis (PWA) in order to study strange mesons that decay to K+?+??. In the PWA, a useful model for the angular distributions was found but no significant structures could be observed due to statistical limitations.

Hurley, Andrew↗
DOE OSTI2022

Accelerated Deterministic Phonon Transport With Consistent Material Temperature and Intensities

Abstract We present a method for deterministically solving the frequency and temperature dependent phonon radiative transport (PRT) equation in the single-mode relaxation time (SMRT) approximation in the self-adjoint angular flux (SAAF) form. To handle the nonlinear coupling between the phonon intensities and the material temperature, we apply a linearization approach that is similar to one in thermal radiative transport. This procedure leads to the PRT equation with pseudo-scattering. The method presented includes acceleration of both the inner pseudo-scattering source iterations and outer temperature iteration with a gray diffusion synthetic acceleration (DSA) and Anderson acceleration, respectively. We use the finite-element method to discretize the PRT equation in space and the method of discrete ordinates (SN) for angular discretization. The proposed method is verified by a gray method of manufactured solutions problem and demonstrated on a problem using temperature and direction dependent multigroup data from lithium aluminate (LiAlO2). The iterative performance of the acceleration method in each test is then compared to the unaccelerated method.

Engineering↗