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DOE OSTI2025

Extremely Scalable Distributed Computation of Contour Trees via Pre-Simplification

Contour trees offer an abstract representation of the level set topology in scalar fields and are widely used in topological data analysis and visualization. However, applying contour trees to large-scale scientific datasets remains challenging due to scalability limitations. Recent developments in distributed hierarchical contour trees have addressed these challenges by enabling scalable computation across distributed systems. Building on these structures, advanced analytical tasks—such as volumetric branch decomposition and contour extraction—have been introduced to facilitate large-scale scientific analysis. Despite these advancements, such analytical tasks substantially increase memory usage, which hampers scalability. In this paper, we propose a pre-simplification strategy to significantly reduce the memory overhead associated with analytical tasks on distributed hierarchical contour trees. We demonstrate enhanced scalability through strong scaling experiments, constructing the largest known contour tree—comprising over half a trillion nodes with complex topology—in under 15 minutes on a dataset containing 550 billion elements.

Li, Mingzhe [University of Utah]↗

DOE OSTI2021

Multi-scale Multi-physics Scientific Machine Learning for Water Cycle Extreme Events Identification, Labelling, Representation, and Characterization

Impacts of climate are usually felt through extreme events such as droughts, floods, thunderstorms, windstorms, wildfires, and so on, that are intimately tied to the water cycle. Predicting the frequency and severity of extreme events under climate change remains a significant challenge; meanwhile, the mechanisms and impacts of these extremes are far from well understood. There are several major science challenges: (1) Lack of labelled extreme events data and missing standards in defining extremes; (2) Computational demand of high-resolution ensemble climate modeling; (3) Modeling the multiscale multi-physics hierarchical structure of compound extremes; (4) Lack of understanding of mechanisms of extreme events; (5) Large uncertainty in extreme events impacts on infrastructure; (6) Subjective assessment of weather-related risk from seasonal to multi-decadal time scales and lack of metrics for risk assessment and mitigation control.

54 ENVIRONMENTAL SCIENCES↗

NASA NTRS1973

Shuttle avionics and the goal language including the impact of error detection and redundancy management

The relationship is examined between the space shuttle onboard avionics and the ground test computer language GOAL when used in the onboard computers. The study is aimed at providing system analysis support to the feasibility analysis of a GOAL to HAL translator, where HAL is the language used to program the onboard computers for flight. The subject is dealt with in three aspects. First, the system configuration at checkout, the general checkout and launch sequences, and the inventory of subsystems are described. Secondly, the hierarchic organization of onboard software and different ways of introducing GOAL-derived software onboard are described. Also the flow of commands and test data during checkout is diagrammed. Finally, possible impact of error detection and redundancy management on the GOAL language is discussed.

Flanders, J. H.↗

NASA NTRS1994

The SAX Italian scientific satellite. The on-board implemented automation as a support to the ground control capability

This paper presents the capabilities implemented in the SAX system for an efficient operations management during its in-flight mission. SAX is an Italian scientific satellite for x-ray astronomy whose major mission objectives impose quite tight constraints on the implementation of both the space and ground segment. The most relevant mission characteristics require an operative lifetime of two years, performing scientific observations both in contact and in noncontact periods, with a low equatorial orbit supported by one ground station, so that only a few minutes of communications are available each orbit. This operational scenario determines the need to have a satellite capable of performing the scheduled mission automatically and reacting autonomously to contingency situations. The implementation approach of the on-board operations management, through which the necessary automation and autonomy are achieved, follows a hierarchical structure. This has been achieved adopting a distributed avionic architecture. Nine different on-board computers, in fact, constitute the on-board data management system. Each of them performs the local control and monitors its own functions while the system level control is performed at a higher level by the data handling applications software. The SAX on-board architecture provides the ground operators with different options of intervention by three classes of telecommands. The management of the scientific operations will be scheduled by the operation control center via dedicated operating plans. The SAX satellite flight mode is presently being integrated at Alenia Spazio premises in Turin for a launch scheduled for the end of 1995. Once in orbit, the SAX satellite will be subject to intensive check-out activities in order to verify the required mission performances. An overview of the envisaged procedure and of the necessary on-ground activities is therefore depicted as well.

Martelli, Andrea↗

NASA NTRS2006

CAPRI: A Geometric Foundation for Computational Analysis and Design

CAPRI is a software building tool-kit that refers to two ideas; (1) A simplified, object-oriented, hierarchical view of a solid part integrating both geometry and topology definitions, and (2) programming access to this part or assembly and any attached data. A complete definition of the geometry and application programming interface can be found in the document CAPRI: Computational Analysis PRogramming Interface appended to this report. In summary the interface is subdivided into the following functional components: 1. Utility routines -- These routines include the initialization of CAPRI, loading CAD parts and querying the operational status as well as closing the system down. 2. Geometry data-base queries -- This group of functions allow all top level applications to figure out and get detailed information on any geometric component in the Volume definition. 3. Point queries -- These calls allow grid generators, or solvers doing node adaptation, to snap points directly onto geometric entities. 4. Calculated or geometrically derived queries -- These entry points calculate data from the geometry to aid in grid generation. 5. Boundary data routines -- This part of CAPRI allows general data to be attached to Boundaries so that the boundary conditions can be specified and stored within CAPRI s data-base. 6. Tag based routines -- This part of the API allows the specification of properties associated with either the Volume (material properties) or Boundary (surface properties) entities. 7. Geometry based interpolation routines -- This part of the API facilitates Multi-disciplinary coupling and allows zooming through Boundary Attachments. 8. Geometric creation and manipulation -- These calls facilitate constructing simple solid entities and perform the Boolean solid operations. Geometry constructed in this manner has the advantage that if the data is kept consistent with the CAD package, therefore a new design can be incorporated directly and is manufacturable. 9. Master Model access This addition to the API allows for the querying of the parameters and dimensions of the model. The feature tree is also exposed so it is easy to see where the parameters are applied. Calls exist to allow for the modification of the parameters and the suppression/unsuppression of nodes in the tree. Part regeneration is performed by a single API call and a new part becomes available within CAPRI (if the regeneration was successful). This is described in a separate document. Components 1-7 are considered the CAPRI base level reader.

Haimes, Robert↗

DOE OSTI2025

Lens Model Accuracy in the Expected LSST Lensed AGN Sample

Strong gravitational lensing of active galactic nuclei (AGN) enables measurements of cosmological parameters through time-delay cosmography (TDC). With data from the upcoming LSST survey, we anticipate using a sample of O(1000) lensed AGN for TDC. To prepare for this dataset and enable this measurement, we construct and analyze a realistic mock sample of 1300 systems drawn from the OM10 (Oguri & Marshall 2010) catalog of simulated lenses with AGN sources at $z<3.1$ in order to test a key aspect of the analysis pipeline, that of the lens modeling. We realize the lenses as power law elliptical mass distributions and simulate 5-year LSST i-band coadd images. From every image, we infer the lens mass model parameters using neural posterior estimation (NPE). Focusing on the key model parameters, $θ_E$ (the Einstein Radius) and $γ_{lens}$ (the projected mass density profile slope), with consistent mass-light ellipticity correlations in test and training data, we recover $θ_E$ with less than 1% bias per lens, 6.5% precision per lens and $γ_{lens}$ with less than 3% bias per lens, 8% precision per lens. We find that lens light subtraction prior to modeling is only useful when applied to data sampled from the training prior. If emulated deconvolution is applied to the data prior to modeling, precision improves across all parameters by a factor of 2. Finally, we combine the inferred lens mass models using Bayesian Hierarchical Inference to recover the global properties of the lens sample with less than 1% bias.

Venkatraman, Padmavathi [Illinois U., Urbana; KIPA↗

NASA NTRS1975

Land use classification in Bolivia

The Bolivian LANDSAT Program is an integrated, multidisciplinary project designed to provide thematic analysis of LANDSAT, Skylab, and other remotely sensed data for natural resource management and development in Bolivia, is discussed. Among the first requirements in the program is the development of a legend, and appropriate methodologies, for the analysis and classification of present land use based on landscape cover. The land use legend for Bolivia consists of approximately 80 categories in a hierarchical organization which may be collapsed for generalization, or expanded for greater detail. The categories, and their definitions, provide for both a graphic and textual description of the complex and diverse landscapes found in Bolivia, and are designed for analysis from LANDSAT and other remotely sensed data at scales of 1:1,000,000 and 1:250,000. Procedures and example products developed are described and illustrated, for the systematic analysis and mapping of present land use for all of Bolivia.

Brockmann, C. E.↗

DOE OSTI2021

TIC 168789840: A Sextuply Eclipsing Sextuple Star System

We report the discovery of a sextuply eclipsing sextuple star system from TESS data, TIC 168789840, also known as TYC 7037-89-1, the first known sextuple system consisting of three eclipsing binaries. The target was observed in Sectors 4 and 5 during Cycle 1, with lightcurves extracted from TESS Full Frame Image data. It was also previously observed by the WASP survey and ASAS-SN. The system consists of three gravitationally bound eclipsing binaries in a hierarchical structure of an inner quadruple system with an outer binary subsystem. Follow-up observations from several different observatories were conducted as a means of determining additional parameters. The system was resolved by speckle interferometry with a 0.″42 separation between the inner quadruple and outer binary, inferring an estimated outer period of ∼2 kyr. It was determined that the fainter of the two resolved components is an 8.217 day eclipsing binary, which orbits the inner quadruple that contains two eclipsing binaries with periods of 1.570 days and 1.306 days. Markov Chain Monte Carlo (MCMC) analysis of the stellar parameters has shown that the three binaries of TIC 168789840 are “triplets,” as each binary is quite similar to the others in terms of mass, radius, and T {sub eff}. As a consequence of its rare composition, structure, and orientation, this object can provide important new insight into the formation, dynamics, and evolution of multiple star systems. Future observations could reveal if the intermediate and outer orbital planes are all aligned with the planes of the three inner eclipsing binaries.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

NASA NTRS1972

Resource analysis and land use planning with space and high altitude photography

Photographic scales providing resource data for decision making processes of land use and a legend system for barren lands, water resources, natural vegetation, agricultural, urban, and industrial lands in hierarchical framework are applied to various remote sensing techniques. Two natural vegetation resource and land use maps for a major portion of Maricopa County, Arizona are also produced.

Schrumpf, B. J.↗

NASA NTRS1991

Multi-frequency and polarimetric radar backscatter signatures for discrimination between agricultural crops at the Flevoland experimental test site

We describe the calibration and analysis of multi-frequency, multi-polarization radar backscatter signatures over an agriculture test site in the Netherlands. The calibration procedure involved two stages: in the first stage, polarimetric and radiometric calibrations (ignoring noise) were carried out using square-base trihedral corner reflector signatures and some properties of the clutter background. In the second stage, a novel algorithm was used to estimate the noise level in the polarimetric data channels by using the measured signature of an idealized rough surface with Bragg scattering (the ocean in this case). This estimated noise level was then used to correct the measured backscatter signatures from the agriculture fields. We examine the significance of several key parameters extracted from the calibrated and noise-corrected backscatter signatures. The significance is assessed in terms of the ability to uniquely separate among classes from 13 different backscatter types selected from the test site data, including eleven different crops, one forest and one ocean area. Using the parameters with the highest separation for a given class, we use a hierarchical algorithm to classify the entire image. We find that many classes, including ocean, forest, potato, and beet, can be identified with high reliability, while the classes for which no single parameter exhibits sufficient separation have higher rates of misclassification. We expect that modified decision criteria involving simultaneous consideration of several parameters increase performance for these classes.

Freeman, A.↗

NASA NTRS2021

TIC 168789840: A Sextuply Eclipsing Sextuple Star System

We report the discovery of a sextuply eclipsing sextuple star system from TESS data, TIC 168789840, also known as TYC 7037-89-1, the first known sextuple system consisting of three eclipsing binaries. The target was observed in Sectors 4 and 5 during Cycle 1, with light curves extracted from TESS Full Frame Image data. It was also previously observed by the WASP survey and ASAS-SN. The system consists of three gravitationally bound eclipsing binaries in a hierarchical structure of an inner quadruple system with an outer binary subsystem. Follow up observations from several different observatories were conducted as a means of determining additional parameters. The system was resolved by speckle interferometry with a 0 42 separation between the inner quadruple and outer binary, inferring an estimated outer period of ∼2 kyr. It was determined that the fainter of the two resolved components is an 8.217 day eclipsing binary, which orbits the inner quadruple that contains two eclipsing binaries with periods of 1.570 days and 1.306 days. Markov Chain Monte Carlo (MCMC) analysis of the stellar parameters has shown that the three binaries of TIC 168789840 are “triplets,” as each binary is quite similar to the others in terms of mass, radius, and Teff. As a consequence of its rare composition, structure, and orientation, this object can provide important new insight into the formation, dynamics, and evolution of multiple star systems. Future observations could reveal if the intermediate and outer orbital planes are all aligned with the planes of the three inner eclipsing binaries.

Brian P. Powell↗

DOE OSTI2021

A Network-Aware Distributed Energy Resource Aggregation Framework for Flexible, Cost-Optimal, and Resilient Operation

To efficiently use the ubiquitous behind-the-meter distributed energy resources (DERs) in distribution systems for providing grid services, this paper presents a hierarchical control framework for DER optimal aggregation and control. We first develop a convex optimization model to evaluate the DER flexibility, and then use a convex model-predictive-control based approach to dispatch those DERs. The hierarchical control framework consists of a utility controller, community aggregators and multiple home energy management systems. The flexibility of the DERs is evaluated by each controller in the hierarchy such that the resultant flexibility is feasible given its operational domain. Based on the determined flexibility, the hierarchical controllers then compute optimal setpoints for the DERs to help the distribution system regulate node voltages and provide other distribution grid services. Numerical simulations performed on a model of a real distribution feeder in Colorado, using actual DER data in a residential community demonstrate that the proposed approach can effectively alleviate voltage issues and support resilient operation.

24 POWER TRANSMISSION AND DISTRIBUTION↗

DOE OSTI2023

Optimization of the number and locations of the calibration stations needed to monitor soil moisture using distributed temperature sensing systems: A proof-of-concept study

The single-probe heat-pulse (SPHP) technique combined with the Fiber-optic Distributed Temperature Sensing (DTS) technology can offer novel high-resolution measurements of soil moisture (θ) over spatial scales ranging from several centimeters to several kilometers. However, the key limitation of this method is in obtaining the calibration relationship between θ and soil thermal conductivity (λ) across a specific field. In a previous study, a new methodology using a Gaussian processes model was presented to account for the spatial variability in the λ-θ relationship. The model aggregated θ measurements from soil moisture sensors scattered over the SPHP transect with the corresponding DTS λ measurements at their locations. In this study, a novel methodology is tested to optimize the number and locations of soil moisture sensors required to account for the spatial variability of the λ - θ relationship to achieve higher accuracy from the SPHP technique. The proposed methodology utilizes hierarchical clustering to analyze the information contained in the spatial structure of the SPHP measurements as the soil dries from a nearly-saturated condition. The proposed methodology was tested using data from a field in Oklahoma. Monte-Carlo simulation was performed to validate the performance of the proposed methodology. The predictions obtained from the proposed methodology resulted in θ measurements accuracy comparable to those obtained from the 10% best Monte-Carlo iterations of randomly assigned soil moisture locations. Further, this study demonstrates that the proposed methodology is more efficient than the traditional practice of randomly spreading calibration soil moisture sensors along the SPHP transect.

54 ENVIRONMENTAL SCIENCES↗

NASA NTRS2010

Predicting Tropical Cyclogenesis with a Global Mesoscale Model: Hierarchical Multiscale Interactions During the Formation of Tropical Cyclone Nargis(2008)

Very severe cyclonic storm Nargis devastated Burma (Myanmar) in May 2008, caused tremendous damage and numerous fatalities, and became one of the 10 deadliest tropical cyclones (TCs) of all time. To increase the warning time in order to save lives and reduce economic damage, it is important to extend the lead time in the prediction of TCs like Nargis. As recent advances in high-resolution global models and supercomputing technology have shown the potential for improving TC track and intensity forecasts, the ability of a global mesoscale model to predict TC genesis in the Indian Ocean is examined in this study with the aim of improving simulations of TC climate. High-resolution global simulations with real data show that the initial formation and intensity variations of TC Nargis can be realistically predicted up to 5 days in advance. Preliminary analysis suggests that improved representations of the following environmental conditions and their hierarchical multiscale interactions were the key to achieving this lead time: (1) a westerly wind burst and equatorial trough, (2) an enhanced monsoon circulation with a zero wind shear line, (3) good upper-level outflow with anti-cyclonic wind shear between 200 and 850 hPa, and (4) low-level moisture convergence.

Shen, B.-W.↗

DOE OSTI2022

Statistical framework to assess long-term spatio-temporal climate changes: East River mountainous watershed case study

Abstract Evaluation of long-term temporal and spatial climatic change in mountainous regions is a critical challenge because of the interactive effects of multiple land and climatic factors and processes. Here we present the application of the statistical framework to the assessment of changes of climatic conditions, using data from 17 meteorological stations across the East River watershed near Crested Butte, Colorado, USA, and spanning the period from 1966 to 2021. The framework is developed based on (1) a time-series analysis of daily, monthly, and yearly averaged meteorological parameters (temperature, relative humidity, precipitation, wind speed, etc.), (2) evaluation and time series analysis of potential evapotranspiration (ET o ), actual evapotranspiration (ET), aridity index (AI), standard precipitation index (SPI) and standard precipitation-evapotranspiration index (SPEI), and (3) a temporal-spatial climatic zonation of the studied area based on the hierarchical clustering and PCA analysis of the SPEI, because the SPEI can be considered an integrative characteristic of the changes of climatic conditions. The Budyko model, with the application of the Penman–Monteith equation for the estimation of ET o , was used to determine the ET. The time series analysis of the AI is used to identify the periods with energy limited and water limited conditions. Hierarchical clustering of site locations for the three temporal segments of the SPEI showed a significant temporal-spatial shifts, indicating that dynamic climatic processes drive zonation patterns. Therefore, the watershed climatic zonation requires periodic re-evaluation based on the structural time series analysis of meteorological and water balance data.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2026

FitCache: A Transparent Drop-In Framework for Multi-Tier Caching to Accelerate Distributed Deep Learning Workloads

Training in Deep learning (DL) remains highly compute- and data-intensive, with I/O becoming a critical bottleneck as models and datasets scale. Recent studies report that data loading can dominate training time, especially on large-scale HPC systems with shared parallel file systems (PFS). Existing caching approaches either rely on single-tier designs or require intrusive modifications to training pipelines, limiting their portability and effectiveness. In this work, we present FitCache, a transparent drop-in framework for multi-tier caching to accelerate distributed DL training by coordinating fast local memory (e.g., DRAM, Persistent Memory (PMem)) and NVMe as hierarchical caches atop PFS. Our design adapts to hardware diversity, i.e., if NVMe is missing, memory transparently acts as a caching tier, ensuring stable performance. FitCache transparently intercepts I/O requests and issues concurrent fetches across all tiers, returning data from the fastest responder without centralized metadata or static redirection paths. FitCache adapts to dynamic workloads and heterogeneous clusters while maintaining POSIX compatibility. Experiments on Frontier (2048 GPUs) and smaller research clusters show that FitCache reduces training time by up to 40% and per-batch I/O latency by up to 71.6% compared to Lustre Orion PFS, offering a drop-in solution for scalable DL training.

Hu, Guangxing [ORNL] (ORCID:0009000283203614)↗

DOE OSTI2021

Optimal Bayesian supervised domain adaptation for RNA sequencing data

Abstract Motivation When learning to subtype complex disease based on next-generation sequencing data, the amount of available data is often limited. Recent works have tried to leverage data from other domains to design better predictors in the target domain of interest with varying degrees of success. But they are either limited to the cases requiring the outcome label correspondence across domains or cannot leverage the label information at all. Moreover, the existing methods cannot usually benefit from other information available a priori such as gene interaction networks. Results In this article, we develop a generative optimal Bayesian supervised domain adaptation (OBSDA) model that can integrate RNA sequencing (RNA-Seq) data from different domains along with their labels for improving prediction accuracy in the target domain. Our model can be applied in cases where different domains share the same labels or have different ones. OBSDA is based on a hierarchical Bayesian negative binomial model with parameter factorization, for which the optimal predictor can be derived by marginalization of likelihood over the posterior of the parameters. We first provide an efficient Gibbs sampler for parameter inference in OBSDA. Then, we leverage the gene-gene network prior information and construct an informed and flexible variational family to infer the posterior distributions of model parameters. Comprehensive experiments on real-world RNA-Seq data demonstrate the superior performance of OBSDA, in terms of accuracy in identifying cancer subtypes by utilizing data from different domains. Moreover, we show that by taking advantage of the prior network information we can further improve the performance. Availability and implementation The source code for implementations of OBSDA and SI-OBSDA are available at the following link. https://github.com/SHBLK/BSDA. Supplementary information Supplementary data are available at Bioinformatics online.

Biochemistry & Molecular Biology↗

NASA NTRSDate not supplied

Performance Assessment of LunaNet’s Augmented Forward Signal

LunaNet provides a common set of interoperable specifications for communication and position, navigation and time (PNT) services and interfaces soon to be implemented in lunar vicinity. The LunaNet Interoperability Specification (LNIS) provides the design for the GNSS-like Augmented Forward Signal (AFS), which enables orbiting and surface users in lunar space, such as Artemis, to estimate their position, velocity, and time. The specification of AFS defines two orthogonal signal components on a single carrier: the in-phase component (AFS-I), a lower-chip-rate data channel tailored for applications where low SWaP (Size, Weight, and Power) is critical (e.g., IoT devices or search and rescue), and the quadrature component (AFS-Q), a high-chip-rate data-less pilot signal for high-precision, robust lunar navigation and positioning applications. An initial description of AFS was provided in LNIS 2023, with initial analysis results shown in Dafesh 2024 and Dafesh 2025, and the current signal in space description provided in LNIS 2025. As part of NASA's Lunar Communication Relay and Navigation Systems (LCRNS) project, this work expands upon the initial analysis results and proposes a new expanded set of AFS-Q spreading codes that exceed the cross-correlation and autocorrelation sidelobe performance of L1C and other GNSS signals, while providing additional expansion capabilities for future service satellites. A set of 420 codes was selected from a Weil-based code derived from the prime number 10247, which is larger than the 10243 prime number used to derive BeiDou’s B1C Weil sequences. Both the initial set of 210 codes and the expanded set of 420 codes are shown to provide the best cross-correlation of any 10230-chip satellite navigation codes. The performance is demonstrated for hierarchical sets of spreading codes optimized and organized in sets of 30 codes. The work also compares LunaNet’s AFS to terrestrial GNSS signals in terms of acquisition, tracking, and data demodulation performance. Performance is evaluated for receivers that only track the 1.023 MCPS data channel spreading code for low SWaP IoT use cases, as well as for receivers that track both the 1.023 MCPS data channel and the 5.115 MCPS pilot channel spreading code for high-performance use cases. Performance is assessed in the presence of interference and thermal noise. The analysis is performed in terms of expected operating conditions on the lunar surface. Several unique flexibility aspects of the augmented forward signal are described, including the use of the Q channel’s secondary and tertiary codes to enable variable coherent integrations during acquisition. This is compared to GNSS signals such as L5/E5 and MBOC in terms of achievable processing gain for interference mitigation versus acquisition complexity. The work details acquisition and tracking techniques used to optimally acquire and track the primary, secondary, and tertiary codes on the Q channel, as well as acquisition of the I channel spreading code. Acquisition of the 8 ms, Q channel spreading code is also compared to joint acquisition of the I and Q channel primary codes in noise and interference environments

LCRNS↗