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All sourcesNASA NTRSDOE OSTI
NASA NTRS2020

MSL Telecom Automated Anomaly Detection

The Mars Science Laboratory (MSL) Telecom Operations Team at the Jet Propulsion Laboratory (JPL) has implemented a machine learning system in order to automate the anomaly detection process as a part of daily operations. Machine learning enables reliable detection of anomalies in Telecom-related telemetry and automated reporting of Telecom subsystem status, resulting in an 90% reduction in team workload and improved anomaly detection reliability. At present, machine learning methods are used to detect: 1. Anomalous long-term trends in telemetry data 2. Anomalous time-domain evolution of telemetry values Both types of anomalies pose their own unique challenges that are addressed in different ways. In the first case, long term trending of daily minima, maximum, and mean telemetry values in temperatures, currents, voltages, and radio frequency (RF) power levels is used in addition to hard threshold safety checks to look for changes in long-term equipment health and performance. Long-term trending methods allow for ordinary seasonal variations in these quantities caused by temperature changes over the course of the Martian year while allowing operators to determine whether current performance remains in line with historical values from previous years. Changes in long-term trends can provide important insights into the health and status of the rover's on-board systems as well as valuable early warning if subtle degradation begins to take hold. But while trending of daily statistics is valuable, it does not detect anomalies in the short-term time evolution of data over the course of minutes or hours during a day, and this task is handled with short-term shape analysis. Principal components analysis (PCA) has been found to provide robust detection of short-term anomalies, and several examples of the use of PCA to detect actual anomalous events will be provided here. In using PCA, we use both the percentage of explained variance and also a log likelihood test on the PCA expansion coefficients to flag telemetry data for human review. Previous work in the field of spacecraft anomaly detection includes [1] for MSL and [2] for some other JPL missions.

Mukai, Ryan↗
DOE OSTI2018

Quantitative detection of pathogens in centrifugal microfluidic disks

A system and methods for detection of a nucleic acid including forming a plurality of nucleic acid detection complexes are described, each of the complexes including a nucleic acid analyte, a detection agent and a functionalized probe. The method further including binding the nucleic acid detection complexes to a plurality of functionalized particles in a fluid sample and separating the functionalized particles having the nucleic acid detection complexes bound thereto from the fluid sample using a density media. The nucleic acid analyte is detected by detecting the detection agent.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2018

Detectability-Based Resilience of Water Distribution System Using Failure Finger Print

This study introduces a detectability-based sensor localizing framework to enhance the resilience of water distribution systems. The framework includes leakage detection and resilience assessment. A feasibility test and a sensitivity analysis prove the framework successfully can detect correct leakage location. The resilience measure was found to increase for higher detectability and shorter identification time. The sensor location is constrained by minimizing the number of sensors and maximizing the detectability and resilience. Results show that two sensors will efficiently detect burst leakage in the studied network. Detectability varies from 71.3% to 99.4% depending on the location of two sensors, while resilience value was reduced by 7.5%. Estimated water loss due to detection time lag are almost 111 ML, which may lead to significant direct and indirect economic loss.

Lee, Seungyub↗
DOE OSTI2019

Compositions and methods for detecting radiation

Tensioned metastable fluid detectors are disclosed that minimize false positive detection events. The methods involve the use of new fluids that provide improved neutron-alpha fission detection at reduced tension states. The rate of spin is also increased using a new protocol that avoids the creation of liquid imbalances in the arms of a CTMFD (centrifugally tensioned metastable fluid detector). The disclosed CTMFD radiation detection system includes a detector assembly containing a detection fluid, a base, a safety enclosure, a motor and motor mounting bracket, speed sensors, a cooling system that includes an air inlet and outlet and a safety enclosure. The CTMFD radiation detection system can include a plurality of independent detector arms having fluids with distinct Pneg requirements such that the range of detectable radiation is increased. Also disclosed are methods for detecting radiation using the disclosed CTMFD radiation detection system. Motor speed calibration procedures are also disclosed.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗
DOE OSTI2020

Will LISA Detect Harmonic Gravitational Waves from Galactic Cosmic String Loops?

Rapid advancement in the observation of cosmic strings has been made in recent years placing increasingly stringent constraints on their properties, with $G\mu\lesssim 10^{-11}$ from Pulsar Timing Array (PTA). Cosmic string loops with low string tension clump in the Galaxy due to slow loop decay and low gravitational recoil, resulting in great enhancement to loop abundance in the Galaxy. With an average separation of down to just a fraction of a kpc, and the total power of gravitational wave (GW) emission dominated by harmonic modes spanning a wide angular scale, resolved loops located in proximity are powerful, persistent, and highly monochromatic sources of GW with a harmonic signature not replicated by any other sources, making them prime targets for direct detection by the upcoming Laser Interferometer Space Antenna (LISA), whose frequency range is well-matched. Unlike detection of bursts where the detection rate scales with loop abundance, the detection rate for harmonic signal is the result of a complex interplay between the strength of GW emission, loop abundance, and other sources of noise, and is most suitably studied through numerical simulations. We develop a robust and flexible framework for simulating loops in the Galaxy for predicting direct detection of harmonic signal from resolved loops by LISA. Our simulation reveals that the most accessible region in the parameter space consists of large loops $\alpha=0.1$ with low tension $10^{-21}\lesssim G\mu\lesssim 10^{-19}$. Direct detection of field theory cosmic strings is unlikely, with the detection probability $p_{\mathrm{det}}\lesssim 2\%$ for a 1-year mission. An extension suggests that direct detection of cosmic superstrings with a low intercommutation probability is very promising. Searching for harmonic GW signal from resolved loops through LISA observations will potentially place physical constraints on string theory.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2019

Data-driven cyber attack detection and mitigation for decentralized wide-area protection and control in smart grids

Modern power systems have already evolved into complicated cyber physical systems (CPS), often referred to as smart grids, due to the continuous expansion of the electrical infrastructure, the augmentation of the number of heterogeneous system components and players, and the consequential application of a diversity of information and telecommunication technologies to facilitate the Wide Area Monitoring, Protection and Control (WAMPAC) of the day-to-day power system operation. Because of the reliance on cyber technologies, WAMPAC, among other critical functions, is prone to various malicious cyber attacks. Successful cyber attacks, especially those sabotage the operation of Bulk Electric System (BES), can cause great financial losses and social panics. Application of conventional IT security solutions is indispensable, but it often turns out to be insufficient to mitigate sophisticated attacks that deploy zero-day vulnerabilities or social engineering tactics. To further improve the resilience of the operation of smart grids when facing cyber attacks, it is desirable to make the WAMPAC functions per se capable of detecting various anomalies automatically, carrying out adaptive activity adjustments in time and thus staying unimpaired even under attack. Most of the existing research efforts attempt to achieve this by adding novel functional modules, such as model-based anomaly detectors, to the legacy centralized WAMPAC functions. In contrast, this dissertation investigates the application of data-driven algorithms in cyber attack detection and mitigation within a decentralized architecture aiming at improving the situational awareness and self-adaptiveness of WAMPAC. First part of the research focuses on the decentralization of System Integrity Protection Scheme (SIPS) with Multi-Agent System (MAS), within which the data-driven anomaly detection and optimal adaptive load shedding are further explored. An algorithm named as Support Vector Machine embedded Layered Decision Tree (SVMLDT) is proposed for the anomaly detection, which provides satisfactory detection accuracy as well as decision-making interpretability. The adaptive load shedding is carried out by every agent individually with dynamic programming. The load shedding relies on the load profile propagation among peer agents and the attack adaptiveness is accomplished by maintaining the historical mean of load shedding proportion. Load shedding only takes place after the consensus pertaining to the anomaly detection is achieved among all interconnected agents and it serves the purpose of mitigating certain cyber attacks. The attack resilience of the decentralized SIPS is evaluated using IEEE 39 bus model. It is shown that, unlike the traditional centralized SIPS, the proposed solution is able to carry out the remedial actions under most Denial of Service (DoS) attacks. The second part investigates the clustering based anomalous behavior detection and peer-assisted mitigation for power system generation control. To reduce the dimensionality of the data, three metrics are designed to interpret the behavior conformity of generator within the same balancing area. Semi-supervised K-means clustering and a density sensitive clustering algorithm based on Hierarchical DBSCAN (HDBSCAN) are both applied in clustering in the 3D feature space. Aiming to mitigate the cyber attacks targeting the generation control commands, a peer-assisted strategy is proposed. When the control commands from control center is detected as anomalous, i.e. either missing or the payload of which have been manipulated, the generating unit utilizes the peer data to infer and estimate a new generation adjustment value as replacement. Linear regression is utilized to obtain the relation of control values received by different generating units, Moving Target Defense (MTD) is adopted during the peer selection and 1-dimensional clustering is performed with the inferred control values, which are followed by the final control value estimation. The mitigation strategy proposed requires that generating units can communicate with each other in a peer-to-peer manner. Evaluation results suggest the efficacy of the proposed solution in counteracting data availability and data integrity attacks targeting the generation controls. However, the strategy stays effective only if less than half of the generating units are compromised and it is not able to mitigate cyber attacks targeting the measurements involved in the generation control.

24 POWER TRANSMISSION AND DISTRIBUTION↗
DOE OSTI2024

Efficient Anomaly Detection Driven By Different Machine Learning Architectures And Models

The rapid growth and ubiquitous adoption of the internet and cyber-physical systems (CPS) have fundamentally transformed modern communication, work, and human-system interactions. While networks now form the backbone of critical digital ecosystems, enabling seamless data transmission across diverse, interconnected systems, this increased connectivity also expands the attack surface, making real-time detection of network intrusions and anomalies a pressing challenge. Detecting unusual activities within network infrastructure requires advanced data traffic analysis to differentiate between legitimate and malicious interactions. Traditional approaches to network anomaly detectionâ??such as rule-based and signature-based systemsâ??often depend on predefined patterns to identify known anomalies, limiting their effectiveness against emerging, stealthy, or previously unseen threats. These conventional methods suffer from high false alarm rates and fail to adapt to the ever-evolving nature of network traffic, particularly in large-scale, decentralized environments where data volume, velocity, and variety are constantly increasing. This dissertation presents artificial intelligence (AI)-driven approaches to anomaly detection that leverage graphics processing unit (GPU)-enabled high-performance computing (HPC) platforms for processing massive network traffic data and monitoring the components of cyber-physical systems (CPS) for potentially hazardous conditions. The research advances several key contributions: (1) Designing efficient machine learning techniques for CPS condition monitoring and anomaly detection; (2) enabling federated learning (FL) frameworks that enable distributed detection while preserving data privacy and system resilience; (3) exploring graph-based methodologies combining graph neural networks (GNN) and graph machine learning (ML) approaches for the Internet of Things (IoT) and automotive network security, and (4) performing distributed edge computing optimizations that integrate FL with scalable technologies for reduced communication overhead. Through extensive experiments, these methodologies demonstrate that complex anomaly detection and condition monitoring tasks can be achieved while balancing computational efficiency and detection accuracy through fine-grained network information processing. The frameworks developed in this research establish a robust foundation for network anomaly detection, providing scalable, adaptive, and privacy-preserving solutions for safeguarding CPS and IoT networks in an increasingly interconnected digital landscape. The practical implications of these research findings are significant, as they can inform the development of next-generation network security systems and contribute to the protection of critical infrastructure against sophisticated cyber attacks.

Marfo, William↗
DOE OSTI2023

Proactive Intrusion Detection and Mitigation System

SAND2023-05661O The proactive intrusion detection and mitigation system (PIDMS) provides grid-edge situational awareness for cybersecurity defense by capturing real-time distributed energy resource (DER) network traffic and performance data with a novel approach that improves the detection and prevention of cyber-physical attacks. The PIDMS addresses the grid-edge security gap with real-time analysis of both network traffic and photovoltaic performance data to deliver a novel, cyber-physical intrusion detection system (IDS) approach that increases the accuracy and effectiveness of detection and mitigation. This hybrid IDS analysis enables dual monitoring that increases the workload of the adversary; both cyber and physical data would have to be simultaneously spoofed to evade detection. Furthermore, monitoring and analyzing cyber data are insufficient in some cases. For example, in an insider threat aimed at disrupting inverter grid-support functions where proper credentials and authentication are achieved, only the altered PV performance would indicate abnormal behavior. All in all, the PIDMS provides novel capabilities for: • Distributed, real-time cyber-physical detection and mitigation analysis • Cybersecurity defense for grid-edge systems • Analysis framework that can provide situational awareness across the transmission, distribution, and DER systems The PIDMS sensor is designed to collect cyber-physical data, process the data using machine-learning algorithms, detect abnormal events, and deploy mitigations. With these goals, the main functional PIDMS objectives are: • Capability to collect cyber-physical data • Onboard storage of cyber-physical data • Peer-to-peer communication • Computationally efficient machine-learning algorithms • Online cyber-physical data analysis • Alerting/visualization capabilities • Mitigation deployment capability with bump-in-the-wire (BITW) implementation Each of these functional objectives enable PIDMS to perform effective cyber-physical intrusion detection and mitigation. Sandia National Laboratories is a multimission laboratory managed and operated by National Technology & Engineering Solutions of Sandia, LLC, a wholly owned subsidiary of Honeywell International Inc., for the U.S. Department of Energy’s National Nuclear Security Administration under contract DE-NA0003525.

Jones, Christian↗
DOE OSTI2025

Towards automated and real-time multi-object detection of anguilliform fishes from sonar data using YOLOv8 deep learning algorithm

Eels (Anguilla spp.), including American eels (Anguilla rostrata), European eels (Anguilla anguilla), and Japanese eels (Anguilla japonica), are species of critical management and regulatory concern due to their vulnerability to various stressors during downstream migrations. Accurate and efficient detection of migrating eels can improve our understanding of fish behaviors and fish-hydraulic structure interactions, thereby facilitating the design, operation, and optimization of more effective downstream passage facilities from both biological and economic perspectives. However, a real-time, automated framework for detecting migrating eels in real-world applications is currently lacking. Leveraging imaging sonar as a reliable technology for fish passage monitoring, field data are acquired using imaging sonar and then converted to single sonar frames/images for subsequent analysis. In this study, a framework based on the You Only Look Once Version 8 (YOLOv8)-based convolutional neural network is proposed for multi-object detection of eels and non-eel fish using the sonar images after image subtraction and additional wavelet denoising. The results from both training and testing phases demonstrate that the framework's ability can successfully detect both eels and non-eel fish in preprocessed sonar images, achieving F1-scores and mAP@0.50 exceeding 0.84. Additionally, the incorporation of wavelet denoising during preprocessing slightly improve detection performance. Furthermore, the transferability of this framework from eel to lamprey detection is demonstrated to be feasible given the similar morphological characteristics of these two species. Overall, the proposed framework achieves accurate and efficient detection of migrating eels, providing reliable and real-time information that can help conserve vulnerable eel and eel-like populations.

Deep learning↗
DOE OSTI2024

A Hybrid Anomaly Detection Approach for Obfuscated Malware

With the rapid evolution of malicious software, cyber threats have become increasingly sophisticated, employing advanced obfuscation techniques to evade traditional detection methods. This study presents a hybrid anomaly detection approach applied to obfuscated malware. Even though there is a large body of research in this field, existing malware detection techniques have some drawbacks, such as requiring large amounts of data, trustworthiness (imprecise results) of algorithms, and advanced obfuscation. To overcome these challenges, there is a need to employ solid and efficient techniques for malware detection. This paper proposes a hybrid approach, combining an autoencoder with traditional machine-learning methods to create an efficient malware detection framework. We used the malware memory dataset (MalMemAnalysis-2022) to evaluate this framework. The results indicate that our proposed approach can detect obfuscated malware when a deep autoencoder used for feature learning is combined with logistic regression, and it is extremely fast with an Accuracy, Detection Rate (DR), Matthew Correlation Coefficient(MCC), and Statistical Parity Difference

malware detection, Hybrid Anomly Detection, Obfusc↗
DOE OSTI2024

DyG-DPCD: A Distributed Parallel Community Detection Algorithm for Large-Scale Dynamic Graphs

Dynamic (Temporal) graphs capture the valuable evolution of real-world systems, from the continuously evolving patterns of social interactions and genetic pathways to the dynamic fluctuations of economic forces. Detecting communities for such evolving networks poses unique challenges. Detecting and analyzing the evolution of communities within dynamic graphs unlocks valuable insights into the underlying structural and temporal patterns of real-world systems. However, the sheer volume of modern graph data and the inherent complexity of the temporal dimension pose significant challenges to scalable community detection algorithms. Addressing this gap, our work explores the limited landscape of scalable distributed-memory parallel methods specifically designed for dynamic network community detection. We propose a novel parallel algorithm, DyG-DPCD (Dynamic Graph Distributed Parallel Community Detection), to detect communities in dynamic networks using the Message Passing Interface (MPI) framework. We present a vertex-centric approach, allowing us to detect communities through local optimization. Furthermore, we enhance our baseline algorithm by incorporating three heuristics, which improve the algorithm’s performance significantly while maintaining the quality of the solutions. We demonstrate the efficiency of our algorithm by experimenting on several real-world large-scale networks with hundreds of millions of edges spanning diverse domains. Notably, DyG-DPCD achieves speedups between 25× and 30× for large networks that we experimented on using NERSC compute nodes. In conclusion, our algorithm outperforms the STINGER parallel re-agglomeration algorithm by 30×.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2019

Vehicle detection based on visual attention mechanism and adaboost cascade classifier in intelligent transportation systems

Robust and efficient vehicle detection is an essential task in intelligent transportation systems (ITS). Unfortunately, due to a great diversity of vehicle profiles and outdoor illumination conditions, it is a challenge to detect vehicles effectively. This paper proposes a method for high-performance vehicle detection based on visual attention mechanism and AdaBoost cascade classifier. Our method constructs the structural Haar features and extracts the features of samples using structural Haar features and trains an AdaBoost cascade classifier. Then we use the visual attention mechanism to extract the target candidate region. At last, we generate detecting sub-windows in the candidate region and discriminate them with the cascade classifier to realize vehicle detection. We compare the performance of this method against two variants, one using MB–LBP features and another using Haar features. The experimental results demonstrate satisfactory performance for the proposed method in term of training speed, detecting speed and detecting accuracy.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2022

A data-centric weak supervised learning for highway traffic incident detection

Using the data from loop detector sensors for near-real-time detection of traffic incidents on highways is crucial to averting major traffic congestion. While recent supervised machine learning methods offer solutions to incident detection by leveraging human-labeled incident data, the false alarm rate is often too high to be used in practice. Specifically, the inconsistency in the human labeling of the incidents significantly affects the performance of supervised learning models. To that end, we focus on a data-centric approach to improve the accuracy and reduce the false alarm rate of traffic incident detection on highways. We develop a weak supervised learning workflow to generate high-quality training labels for the incident data without the ground truth labels, and we use those generated labels in the supervised learning setup for final detection. This approach comprises three stages. First, we introduce a data preprocessing and curation pipeline that processes traffic sensor data to generate high-quality training data through leveraging labeling functions, which can be domain knowledge-related or simple heuristic rules. Second, we evaluate the training data generated by weak supervision using three supervised learning models-random forest, k-nearest neighbors, and a support vector machine ensemble-and long short-term memory classifiers. The results show that the accuracy of all of the models improves significantly after using the training data generated by weak supervision. Third, we develop an online real-time incident detection approach that leverages the model ensemble and the uncertainty quantification while detecting incidents. Finally, we show that our proposed weak supervised learning workflow achieves a high incident detection rate (0.90) and low false alarm rate (0.08).

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2023

Spatiotemporal features of traffic help reduce automatic accident detection time

Quick and reliable automatic detection of traffic accidents is of paramount importance to save human lives in transportation systems. However, automatically detecting when accidents occur has proven challenging, and minimizing the time to detect accidents (TTDA) by using traditional features in machine learning (ML) classifiers has plateaued. We hypothesize that accidents affect traffic farther from the accident location than previously reported. Therefore, leveraging traffic signatures from neighboring sensors that are adjacent to accidents should help improve their detection. We confirm this hypothesis by using verified ground-truth accident data, traffic data from radar detection system sensors, and light and weather conditions and show that we can minimize the TTDA while maximizing classification performance by considering spatiotemporal features of traffic. Specifically, we compare the performance of different ML classifiers (i.e, logistic regression, random forest, and XGBoost) when controlling for different numbers of neighboring sensors and TTDA horizons. We use data from interstates 75 and 24 in the metropolitan area that surrounds Chattanooga, TN. Our results show that the XGBoost classifier produces the best results by detecting accidents as quickly as 1.0 min after their occurrence with an area under the receiver operating characteristic curve of up to 83% and an average precision of up to 49%. We describe limitations, open challenges, and how the proposed framework can be used for quicker operational accident detection.

33 ADVANCED PROPULSION SYSTEMS↗
DOE OSTI2018

Sensitive and selective colorimetric detection of Pb2+ by silver nanoparticles synthesized from Aconitum violaceum plant leaf extract

Highlights: • A new colorimetric sensor for the detection of Pb{sup 2+} using Aconitum violaceum leaf extract synthesized AgNPs was developed. • The color and spectral variations of the assay was easily detected by naked eye or spectrophotometer. • The bio-functionalized AgNPs were capable of detecting Pb{sup 2+} in the range of 0.5 × 10{sup −7}–2.5 × 10{sup −5} M with good linearity. • The proposed method showed high specificity and good recoveries for Pb{sup 2+} in river water. - Abstract: In this work, we propose a simple and cost effective colorimetric method for the detection of Pb{sup 2+} using silver nanoparticles (AgNPs) prepared from the leaf extract of Aconitum violaceum. Due to the presence of significant amount of polyphenols in the extract, the AgNPs were successfully synthesized and were then characterized by UV–vis spectroscopy, Fourier transform infrared spectroscopy (FT-IR), X-Ray diffraction (XRD) and transmission electron microscopy (TEM). The as prepared AgNPs were employed as colorimetric probes for the detection of Pb{sup 2+}. In the presence of Pb{sup 2+}, the biosynthesized AgNPs showed a color transformation from yellow to red, which was readily determined by UV–vis spectroscopy. The novel sensor exhibited good linearity for the detection of Pb{sup 2+} in the concentration range of 0.5 - 25 μM (R{sup 2 }= 0.996) with a detection limit (LOD) of 0.1 μM. Also, this sensing system presented a highly selective response for Pb{sup 2+} determination.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

The impact of detection rate changes and correlations on random-coincidence background measurements

Coincidence detection of multiple particles emitted during an experiment can yield a new depth of understanding of the underlying process under study. However, the probability of detecting particles that are generated from the same physical event within a given coincidence time window is generally much lower than that of detecting particles that appear in the same coincidence time window, but were not created from the same physical event, and are therefore detected randomly in coincidence with each other. Thus, accurate and precise methods of measuring this random-coincidence background are essential for a wide variety of fields of science. A method to determine this background directly using the data themselves without any additional experimental run time or fake signals introduced in the data was recently established (O’Donnell, 2016). This method yields a statistical uncertainty on the random-coincidence background that is orders of magnitude smaller than that of the true coincidence data, though the potential for systematic errors of backgrounds from this method was never explored. In this work, we discuss common varieties of correlated and uncorrelated changes in the detection rates of each particle detected in an experiment. Here we demonstrate here that a correlation between particle detection rates from, for example, an incident particle beam that initiates a physical process of interest, creates systematic errors in the random-coincidence background measurement. We also discuss the impact of a variety of other realistic scenarios for rate changes in experiments. Lastly, a method is introduced to correct for errors in the random-coincidence background from any source, yielding an optimization between statistical precision and eliminating potential lingering systematic errors.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗
DOE OSTI2017

Dispersive Fourier transformation for megahertz detection of coherent stokes and anti-stokes Raman spectra

In many fields of study, from coherent Raman microscopy on living cells to time-resolved coherent Raman spectroscopy of gas-phase turbulence and combustion reaction dynamics, the need for the capability to time-resolve fast dynamical and nonrepetitive processes has led to the continued development of high-speed coherent Raman methods and new high-repetition rate laser sources, such as pulse-burst laser systems. However, much less emphasis has been placed on our ability to detect shot to shot coherent Raman spectra at equivalently high scan rates, across the kilohertz to megahertz regime. This is beyond the capability of modern scientific charge coupled device (CCD) cameras, for instance, as would be employed with a Czerny-Turner type spectrograph. In this paper, as an alternative detection strategy with megahertz spectral detection rate, we demonstrate dispersive Fourier transformation detection of pulsed (~90 ps) coherent Raman signals in the time-domain. Instead of reading the frequency domain signal out using a spectrometer and CCD, the signal is transformed into a time-domain waveform through dispersive Fourier transformation in a long single-mode fiber and read-out with a fast sampling photodiode and oscilloscope. Molecular O- and S-branch rotational sideband spectra from both N 2 and H 2 were acquired employing this scheme, and the waveform is fitted to show highly quantitative agreement with a molecular model. Finally, the total detection time for the rotational spectrum was 20 ns, indicating an upper limit to the detection frequency of ~50 MHz, significantly faster than any other reported spectrally-resolved coherent anti-Stokes Raman detection strategy to date.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2020

A Quantum Dot Nanobiosensor for Rapid Detection of Botulinum Neurotoxin Serotype E

Botulinum neurotoxins (BoNTs) are potent toxins produced by Clostridium bacteria that are responsible for the illness botulism and are listed as bioterrorism agents. BoNT serotype E (BoNT/E) is one of four BoNT serotypes that cause human botulism and is the second most frequent cause of foodborne botulism. Rapid detection and discrimination of BoNT serotypes implicated in human disease are critical for ensuring timely treatment of patients and identifying sources of toxins, but there have been few reported detection methods for BoNT/E and even fewer methods usable for BoNT serotyping. We report a nanobiosensor based on Forster resonance energy transfer (FRET) between semiconductor nanocrystals (quantum dots, QDs) and dark quencher-labeled peptide probes to detect biologically active BoNT/E in aqueous media. The peptide probes contain a specific cleavage site for active BoNT/E. QD photoluminescence, which changes intensity due to FRET when the peptide probe is cleaved, was used to indicate toxin presence and quantity. The detection of a BoNT/E light chain (LcE) and holotoxin was observed within 3 h. The limits of detection were 0.02 and 2 ng/mL for LcE and holotoxin, respectively. The nanobiosensor shows good specificity toward the target in tests with nontarget BoNT serotypes. The high sensitivity, simple operation, short detection time, and ability to be used in parallel with probes developed for other BoNT serotypes indicate that the nanobiosensor will be useful for rapid BoNT/E detection and serotype discrimination in food analysis.

botulinum neurotoxin E↗