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NASA NTRS1995

North-south asymmetry of the interplanetary magnetic helicity

Previous analyses of the north-south asymmetry of the interplanetary magnetic helicity have used the omnitape dataset and have shown that there exists a persistent and statistically significant asymmetry in the handedness of the magnetic fluctuations at 1 AU. This asymmetry is concentrated in fluctuations with spacecraft frame frequencies less than 10-5 Hz (periods greater than 30 hours) at 1 AU. Attempts to extend these analyses to include data collected in the outer heliosphere require that we consider spacecraft frame periods many times greater than 30 hours. This raises interesting questions regarding homogeneity and stationarity of the datasets at this scale and brings into question the possible breakdown of the computed correlation functions due to the sector structure of the solar wind. The likely geometry of magnetic fluctuations in the outer heliosphere provides yet another complication in the analysis. These issues will be discussed in detail and the latest results from our studies of the Voyager 1 & 2 and Pioneer 10 & 11 datasets will be presented. The analysis of Pioneer-Venus Orbiter observations will be shown as well. The potential asymmetry between the magnetic helicity of the two hemispheres has significant and measurable implications for cosmic ray propagation in the heliosphere and these implications will be reviewed in light of the new results.

Smith, Charles W.↗
NASA NTRS1997

Control of Methane Production and Exchange in Northern Peatlands

This proposal has successfully supported studies that have developed unique long ten-n datasets of methane (CH4) emissions and carbon dioxide (CO2) exchange in order to quantify the controls on CH4 production and exchange especially the linkages to the carbon cycle in northern peatlands. The primary research site has been a small fen in southeastern New Hampshire where a unique multi-year data baseline of CH4 flux measurements was begun (with NASA funding) in 1989. The fen has also been instrumented for continuous hydrological and meteorological observations and year-round porewater sampling. Multiyear datasets of methane flux are very valuable and very rare. Datasets using the same sampling techniques at the same sites are the only way to assess the effect of the integrated ecosystem response to climatological variability. The research has had two basic objectives: 1. To quantify the effect of seasonal and interannual variability on CH4flux. 2. To examine process level controls on methane dynamics.

Crill, Patrick↗
NASA NTRS1997

Land-use in Amazonia and the Cerrado of Brazil: State of Knowledge and GIS Database

We have assembled datasets to strengthen the LargeScale Biosphere Atmosphere Experiment in Amazonia (LBA). These datasets can now be accessed through the Woods Hole Research Center homepage (www.whrc.org), and will soon be linked to the Pre-LBA homepages of the Brazilian Space Research Institute's Center for Weather and Climate Prediction (Instituto de Pesquisas Espaciais, Centro de Previsao de Tempo e Estudos Climaticos, INPE/CPTEC) and through the Oak Ridge National Laboratory, Distributed Active Archive Center (ORNL/DMC). Some of the datasets that we are making available involved new field research and/or the digitization of data available in Brazilian government agencies. For example, during the grant period we conducted interviews at 1,100 sawmills across Amazonia to determine their production of sawn timber, and their harvest intensities. These data provide the basis for the first quantitative assessment of the area of forest affected each year by selective logging (Nepstad et al, submitted to Nature). We digitized the locations of all of the rural households in the State of Para that have been mapped by the Brazilian malaria combat agency (SUCAM). We also mapped and digitized areas of deforestation in the state of Tocantins, which is comprised largely of savanna (cerrado), an ecosystem that has been routinely excluded from deforestation mapping exercises.

Nepstad, Daniel C.↗
NASA NTRS1998

Incorporating Parallel Computing into the Goddard Earth Observing System Data Assimilation System (GEOS DAS)

Atmospheric data assimilation is a method of combining actual observations with model forecasts to produce a more accurate description of the earth system than the observations or forecast alone can provide. The output of data assimilation, sometimes called the analysis, are regular, gridded datasets of observed and unobserved variables. Analysis plays a key role in numerical weather prediction and is becoming increasingly important for climate research. These applications, and the need for timely validation of scientific enhancements to the data assimilation system pose computational demands that are best met by distributed parallel software. The mission of the NASA Data Assimilation Office (DAO) is to provide datasets for climate research and to support NASA satellite and aircraft missions. The system used to create these datasets is the Goddard Earth Observing System Data Assimilation System (GEOS DAS). The core components of the the GEOS DAS are: the GEOS General Circulation Model (GCM), the Physical-space Statistical Analysis System (PSAS), the Observer, the on-line Quality Control (QC) system, the Coupler (which feeds analysis increments back to the GCM), and an I/O package for processing the large amounts of data the system produces (which will be described in another presentation in this session). The discussion will center on the following issues: the computational complexity for the whole GEOS DAS, assessment of the performance of the individual elements of GEOS DAS, and parallelization strategy for some of the components of the system.

Larson, Jay W.↗
NASA NTRS1999

The Kalman Filter and High Performance Computing at NASA's Data Assimilation Office (DAO)

Atmospheric data assimilation is a method of combining actual observations with model simulations to produce a more accurate description of the earth system than the observations alone provide. The output of data assimilation, sometimes called "the analysis", are accurate regular, gridded datasets of observed and unobserved variables. This is used not only for weather forecasting but is becoming increasingly important for climate research. For example, these datasets may be used to assess retrospectively energy budgets or the effects of trace gases such as ozone. This allows researchers to understand processes driving weather and climate, which have important scientific and policy implications. The primary goal of the NASA's Data Assimilation Office (DAO) is to provide datasets for climate research and to support NASA satellite and aircraft missions. This presentation will: (1) describe ongoing work on the advanced Kalman/Lagrangian filter parallel algorithm for the assimilation of trace gases in the stratosphere; and (2) discuss the Kalman filter in relation to other presentations from the DAO on Four Dimensional Data Assimilation at this meeting. Although the designation "Kalman filter" is often used to describe the overarching work, the series of talks will show that the scientific software and the kind of parallelization techniques that are being developed at the DAO are very different depending on the type of problem being considered, the extent to which the problem is mission critical, and the degree of Software Engineering that has to be applied.

Lyster, Peter M.↗
NASA NTRS1999

Parallel Visualization of Large-Scale Aerodynamics Calculations: A Case Study on the Cray T3E

This paper reports the performance of a parallel volume rendering algorithm for visualizing a large-scale, unstructured-grid dataset produced by a three-dimensional aerodynamics simulation. This dataset, containing over 18 million tetrahedra, allows us to extend our performance results to a problem which is more than 30 times larger than the one we examined previously. This high resolution dataset also allows us to see fine, three-dimensional features in the flow field. All our tests were performed on the Silicon Graphics Inc. (SGI)/Cray T3E operated by NASA's Goddard Space Flight Center. Using 511 processors, a rendering rate of almost 9 million tetrahedra/second was achieved with a parallel overhead of 26%.

Ma, Kwan-Liu↗
NASA NTRS2001

A 3-Year Climatology of Cloud and Radiative Properties Derived from GOES-8 Data Over the Southern Great Plains

While the various instruments maintained at the Atmospheric Radiation Measurement (ARM) Program Southern Great Plains (SGP) Central Facility (CF) provide detailed cloud and radiation measurements for a small area, satellite cloud property retrievals provide a means of examining the large-scale properties of the surrounding region over an extended period of time. Seasonal and inter-annual climatological trends can be analyzed with such a dataset. For this purpose, monthly datasets of cloud and radiative properties from December 1996 through November 1999 over the SGP region have been derived using the layered bispectral threshold method (LBTM). The properties derived include cloud optical depths (ODs), temperatures and albedos, and are produced on two grids of lower (0.5 deg) and higher resolution (0.3 deg) centered on the ARM SGP CF. The extensive time period and high-resolution of the inner grid of this dataset allows for comparison with the suite of instruments located at the ARM CF. In particular, Whole-Sky Imager (WSI) and the Active Remote Sensing of Clouds (ARSCL) cloud products can be compared to the cloud amounts and heights of the LBTM 0.3 deg grid box encompassing the CF site. The WSI provides cloud fraction and the ARSCL computes cloud fraction, base, and top heights using the algorithms by Clothiaux et al. (2001) with a combination of Belfort Laser Ceilometer (BLC), Millimeter Wave Cloud Radar (MMCR), and Micropulse Lidar (MPL) data. This paper summarizes the results of the LBTM analysis for 3 years of GOES-8 data over the SGP and examines the differences between surface and satellite-based estimates of cloud fraction.

Khaiyer, M. M.↗
NASA NTRS2002

The IERS Special Bureau for Tides

The Global Geophysical Fluids Center of the International Earth Rotation Service (IERS) comprises 8 special bureaus, one of which is the Special Bureau for Tides. Its purpose is to facilitate studies related to tidal effects in earth rotation. To that end it collects various relevant datasets and distributes them, primarily through its website at bowie.gsfc.nasa.gov/ggfc/tides. Example datasets include tabulations of tidal variations in angular momentum and in earth rotation as estimated from numerical ocean tide models and from meteorological reanalysis products. The web site also features an interactive tidal prediction "machine" which generates tidal predictions (e.g., of UT1) from lists of harmonic constants. The Special Bureau relies on the tidal and earth-rotation communities to build and enlarge its datasets; further contributions from this community are most welcome.

Ray, Richard D.↗
NASA NTRS2003

RGS Spectroscopy of the Cygnus Loop XA Knot

The observations were performed at the end of April 2002, and the data were received in July 2002. Unfortunately, the observations were badly compromised by high levels of background radiation; one the three observations lost entirely. Two replacement observations were scheduled for November 2002, and were only made available in January of 2003. Consequently, we have had little time to grapple with the unusual data analysis challenges. The search for a postdoctoral fellow has been successfully concluded, and Manami Sasaki began working for us in January 2003. She will be supported in part by these funds, and will be working to help understand these data. Examination of the RGS 'Orders' images indicate the presence of broad emission lines (as expected for the diffuse XA knot). However, examination of the 'Spatial' dispersion/cross-dispersion images indicate that the emission is also broad in the cross-dispersion direction. (As a crosscheck, some of the 'Lockman Hole' datasets were also examined as representative 'sky background' datasets; in these, both types of images are relatively flat (outside the calibration source regions). The quicklook plots of the spectra show the expected O VII and O VIII lines, in addition to a complex around 35 Angstroms; the approx. 35 Angstrom line is likely the C V He-beta line at 34.97 Angstrom, but identifying the additional line(s) will require a more careful reduction of the data. Consequently, there is valuable information to be extracted from these data, but it is complicated by diffuse nature of the emission. Because the angular scale is large, we will have to make use of sky background datasets in order to do the background fitting. A color composite image of OM data in the three UV bands was presented at the 'How does the Galaxy Work?' meeting, and compared to optical and X-ray imaging data. Quantitative analysis will require obtaining the effective bandpasses of the UV filters so that the predominant line and continuum contributions can be identified using plasma shock emission models. In view of the facts that the data were only obtained relatively recently, and the complexity of the data analysis, we request a one year no-cost extension on the grant.

Gaetz, Terrance J.↗
NASA NTRS2003

Macromolecular Expression and Function: A New Paradigm for NASA Risk Assessment

Predicting risks in humans of either acute effects such as bone loss or muscle wasting, or late effects such as cancer, is challenging. To an approximation, this is because uncertainties of exposure to stress factors or toxic agents and the uniformity of processing subsequent damage at the cellular level within a complex set of biological variables degrade the confidence of predicting pathologic outcome. A cellular biodosimeter that simultaneously reports 1) the type of damage due to that exposure, 2) the quantity of damage incurred by that exposure, and 3) the dataset used to assess risk of developing pathologic outcome caused by that exposure would therefore be useful for predicting ultimate risks faced by an individual, such as an astronaut. It is suggested that such a biodosimeter can be based upon analyses of gene-expression and protein expression whereby large datasets of cellular response to damage are obtained and analyzed for expression-profiles correlated with established end points and molecular markers predictive for risks being assessed. The usefulness of multiparametric cellular biodosimeters could be realized by quantitatively profiling these datasets using techniques of bioinformatics. Such an approach contributes to the foundation of molecular epidemiology as a new scientific discipline, and represents a new paradigm of risk assessment.

Richmond, Robert↗
NASA NTRS2003

Intercomparison of Latent Heat Fluxes Over Global Oceans

Turbulent fluxes of momentum, moisture, and heat at the air-sea interface are essential for climate studies. Version 2 Goddard Satellite-based Surface Turbulent Fluxes (GSSTF2) has been derived from the Special Sensor Microwave/Imager (SSM/I) radiance measurements. This dataset, covering the period July 1987-December 2000 over global oceans, has a spatial resolution of 1 deg x 1 deg lat-long and a temporal resolution of 1 day. Turbulent fluxes are derived from the SSM/I surface winds and surface air humidity, as well as the 2-m air and sea surface temperatures (SST) of the NCEP/NCAR reanalysis, using a bulk aerodynamic algorithm based on the surface layer similarity theory. The GSSTF2 bulk flux model, and retrieved daily wind stress, latent heat flux, wind speed, and surface air humidity validate well with ship observations of ten field experiments over the tropical and midlatitude oceans during 1991-99. The global distributions of 1988-2000 annual- and seasonal-mean turbulent fluxes show reasonable patterns related to the atmospheric general circulation and seasonal variations. Latent heat fluxes and related input parameters over global oceans during 1992-93 have been compared among GSSTF1 (version 1), GSSTF2, HOAPS (Hamburg Ocean Atmosphere Parameters and Fluxes from Satellite Data), NCEP/NCAR reanalysis, and one based on COADS (Comprehensive Ocean-Atmosphere Data Set). Our analyses suggest that the GSSTF2 latent heat flux, surface air humidity, surface wind, and SST are quite realistic compared to the other four flux datasets examined. However, significant differences are found among these five flux datasets. The GSSTF2, available at http://daac.gsfc.nasa.gov/CAMPAIGN_DOCS/hydrology/hd_gsstf2.O.html, is useful for climate studies.

Chou, Shu-Hsien↗
NASA NTRS2004

Radiation Risk Assessment of the Individual Astronaut: A Complement to Radiation Interests at the NIH

Predicting human risks following exposure to space radiation is uncertain in part because of unpredictable distribution of high-LET and low-dose-derived damage amongst cells in tissues, unknown synergistic effects of microgravity upon gene- and protein-expression, and inadequately modeled processing of radiation-induced damage within cells to produce rare and late-appearing malignant cancers. Furthermore, estimation of risks of radiogenic outcome within small numbers of astronauts is not possible using classic epidemiologic study. It therefore seems useful to develop strategies of risk-assessment based upon large datasets acquired from correlated biological models useful for resolving radiogenic risk-assessment for irradiated individuals. In this regard, it is suggested that sensitive cellular biodosimeters that simultaneously report 1) the quantity of absorbed dose after exposure to ionizing radiation, 2) the quality of radiation delivering that dose, and 3) the biomolecular risk of malignant transformation be developed in order to resolve these NASA-specific challenges. Multiparametric cellular biodosimeters could be developed using analyses of gene-expression and protein-expression whereby large datasets of cellular response to radiation-induced damage are analyzed for markers predictive for acute response as well as cancer-risk. A new paradigm is accordingly addressed wherein genomic and proteomic datasets are registered and interrogated in order to provide statistically significant dose-dependent risk estimation in individual astronauts. This evaluation of the individual for assessment of radiogenic outcomes connects to NIH program in that such a paradigm also supports assignment of a given patient to a specific therapy, the diagnosis of response of that patient to therapy, and the prediction of risks accumulated by that patient during therapy - such as risks incurred by scatter and neutrons produced during high-energy Intensity-Modulated Radiation Therapy. Value of assessment of radiogenic outcome for individuals exposed to radiation is suggested to be common to both NASA and NIH.

Richmond, Robert C.↗
NASA NTRS2004

Contribution of TOMS to Earth Science- An Overview

The TOMS instrument was launched on the Nimbus-7 satellite in Oct 1978 with the goal of understanding the meteorological influences on the ozone column. The nominal lifetime of the instrument was 1 year. However, in response to the concern over possible man-made influences on the ozone layer NASA continued to nurse the instrument for 13.5 years and launched a major program to produce accurate trend quality dataset of ozone. Despite severe optical degradation and other significant anomalies that developed in the instrument over its lifetime, the effort turned out to be a tremendous success. In 1984, TOMS took center stage as the primary provider of Antarctic ozone hole maps to the world community; it continues to play that role until today. An unexpected benefit of the close attention paid to improving the TOMS data quality was that several atmospheric constituents that interfere with ozone measurement were also identified and meticulously converted into long-term datasets of their own. These constituents include clouds, volcanic S02, aerosols, and ocean phytoplankton. In addition, the high quality of the basic datasets made it possible to produce global maps of surface UV and tropospheric ozone. In most cases there are no other sources of these data sets. Advanced UV instruments currently under development in the US and Europe will continue to exploit the TOMS-developed techniques for several decades.

Bhartia, P. K.↗
NASA NTRS2001

'The surface management system' (SuMS) database: a surface-based database to aid cortical surface reconstruction, visualization and analysis

Surface reconstructions of the cerebral cortex are increasingly widely used in the analysis and visualization of cortical structure, function and connectivity. From a neuroinformatics perspective, dealing with surface-related data poses a number of challenges. These include the multiplicity of configurations in which surfaces are routinely viewed (e.g. inflated maps, spheres and flat maps), plus the diversity of experimental data that can be represented on any given surface. To address these challenges, we have developed a surface management system (SuMS) that allows automated storage and retrieval of complex surface-related datasets. SuMS provides a systematic framework for the classification, storage and retrieval of many types of surface-related data and associated volume data. Within this classification framework, it serves as a version-control system capable of handling large numbers of surface and volume datasets. With built-in database management system support, SuMS provides rapid search and retrieval capabilities across all the datasets, while also incorporating multiple security levels to regulate access. SuMS is implemented in Java and can be accessed via a Web interface (WebSuMS) or using downloaded client software. Thus, SuMS is well positioned to act as a multiplatform, multi-user 'surface request broker' for the neuroscience community.

NASA Discipline Neuroscience↗
NASA NTRS2004

The Southern Hemisphere Additional Ozonesondes (SHADOZ) 1998-2002 Tropical Ozone Climatology: Instrumentation and Station-to-Station Variability - 3

Abstract: Since 1998 the Southern Hemisphere ADditional OZonesondes (SHADOZ) project has collected more than 2000 ozone profiles from a dozen tropical and subtropical sites using balloon-borne electrochemical concentration cell (ECC) ozonesondes. The data (with accompanying pressure-temperature-humidity soundings) are archived. Analysis of ozonesonde imprecision within the SHADOZ dataset revealed that variations in ozonesonde technique could lead to station-to-station biases in the measurements. In this paper imprecisions and accuracy in the SHADOZ dataset are examined in light of new data. When SHADOZ total ozone column amounts are compared to version 8 TOMS (2004 release), discrepancies between sonde and satellite datasets decline 1-2 percentage points on average, compared to version 7 TOMS. Variability among stations is evaluated using total ozone normalized to TOMS and results of laboratory tests on ozonesondes (JOSE-2O00, Julich Ozonesonde Intercomparison Experiment). Ozone deviations from a standard instrument in the JOSE flight simulation chamber resemble those of SHADOZ station data relative to a SHADOZ-defined climatological reference. Certain systematic variations in SHADOZ ozone profiles are accounted for by differences in solution composition, data processing and instrument (manufacturer). Instrument bias leads to a greater ozone measurement above 25 km over Nairobi and to lower total column ozone at three Pacific sites compared to other SHADOZ stations at 0-20 deg.S.

Thompson, Anne M.↗
NASA NTRS2004

Ionospheric Variability and Storms on Mars

The goal of this grant was to conduct the first-ever study of ionospheric variability on Mars. To do so, we used data from the Radio Science (RS) experiment onboard the Mars Global Surveyor (MGS) satellite. Dr. David Hinson of the RS team at Stanford University was a most helpful and valuable colleague throughout the studies we conducted. For the initial RS datasets available from the MGS mission, there were no severe storms caused by solar wind activity, so we concentrated on day-to-day effects. This turned out to be a wise approach since understanding "normal variability" had to be done before any claim could be made about "space weather" effects. Our approach was three-fold: (1) select a good dataset for characterization of ionosphere variability at Mars, one for which excellent terrestrial data were also available. This turned out to be the period 9-27 March 1999; (2) once the variability at Mars was described, develop and use a new photochemical model of the martian ionosphere to find the extent to which solar variability on those days caused or contributed to the observed patterns; (3) use the results from the above, together with additional datasets from the MGS/RS experiment, to describe some practical consequences that the martian ionosphere would have upon NASA s proposed navigation and communications systems for Mars. The results of these studies showed that: (a) solar variability is the dominant source of ionospheric variability at Mars (during periods of quiet solar wind), (b) that current models do a good job in portraying such effects at the height of the ionospheric peak electron density, and (c) that ionospheric structure on Mars can affect attempts at precise position-fixing at Mars should relatively high (GPS-like) frequencies not be used in a Mars communications and navigation system.

Mendillo, Michael↗
NASA NTRS2004

The Impact of Subsampling on MODIS Level-3 Statistics of Cloud Optical Thickness and Effective Radius

The MODIS Level-3 optical thickness and effective radius cloud product is a gridded l deg. x 1 deg. dataset that is derived from aggregation and subsampling at 5 km of 1 km, resolution Level-2 orbital swath data (Level-2 granules). This study examines the impact of the 5 km subsampling on the mean, standard deviation and inhomogeneity parameter statistics of optical thickness and effective radius. The methodology is simple and consists of estimating mean errors for a large collection of Terra and Aqua Level-2 granules by taking the difference of the statistics at the original and subsampled resolutions. It is shown that the Level-3 sampling does not affect the various quantities investigated to the same degree, with second order moments suffering greater subsampling errors, as expected. Mean errors drop dramatically when averages over a sufficient number of regions (e.g., monthly and/or latitudinal averages) are taken, pointing to a dominance of errors that are of random nature. When histograms built from subsampled data with the same binning rules as in the Level-3 dataset are used to reconstruct the quantities of interest, the mean errors do not deteriorate significantly. The results in this paper provide guidance to users of MODIS Level-3 optical thickness and effective radius cloud products on the range of errors due to subsampling they should expect and perhaps account for, in scientific work with this dataset. In general, subsampling errors should not be a serious concern when moderate temporal and/or spatial averaging is performed.

Oreopoulos, Lazaros↗
NASA NTRS2004

Merging the MODIS and NESDIS Monthly Snow-Cover Records to Study Decade-Scale Changes in Northern Hemisphere Snow Cover

A decade-scale record of Northern Hemisphere snow cover has been available from the National Oceanic and Atmospheric Administration (NOAA) National Environmental Satellite Data and Information Service (NESDIS) and has been reconstructed and validated by Rutgers University following adjustments for inconsistencies that were discovered in the early years of the data set. This record provides weekly, monthly (and, in recent years, daily) snow cover from 1966 to the present for the Northern Hemisphere. With the December 1999 launch of NASA's Earth observing System (EOS) Terra satellite, snow maps are being produced globally, using automated algorithms, on a daily, weekly and monthly basis from the Moderate-Resolution Imaging Spectroradiometer (MODIS) instrument. The resolution of the MODIS monthly snow maps (0.05deg or about 5 km) is an improvement over that of the NESDIS-derived monthly snow maps (>approx.10 km) the maps, it is necessary to study the datasets carefully to determine if it is possible to merge the datasets into a continuous record. The months in which data are available for both the NESDIS and MODIS maps (March 2000 to the present) will be compared quantitatively to analyze differences in North American and Eurasian snow cover. Results from the NESDIS monthly maps show that for North America (including all 12 months), there is a trend toward slightly less snow cover in each succeeding decade. Interannual snow-cover extent has varied significantly since 2000 as seen in both the NESDIS and MODIS maps. As the length of the satellite record increases through the MODIS era, and into the National Polar-orbiting Environmental Satellite System (NPOESS) era, it should become easier to identify trends in areal extent of snow cover, if present, that may have climatic significance. Thus it is necessary to analyze the validity of merging the NESDIS and MODIS, and, in the future, the NPOESS datasets for determination of long-term continuity in measurement of Northern Hemisphere snow cover.

Hall, Dorothy K.↗