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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.
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RadTraQ is a python library housing routines related to assessing and monitoring the quality of a radar's quality and calibration. This library is a work in progress, currently housing scripts to plot radar CFADs, plot and analyze corner reflector scans, calculate noise floors, create cloud masks, and plot up average profiles for comparisons.
FE-DWBA is a software package that computes the x-ray scattering patterns of objects that locate on a surface or buried next to a surface, such as the nano-circuits and nano-patterns of the mask used in the extreme ultraviolet lithography. It can incorporate the dynamical scattering effect (photons scattered multiple times), which is predominant in surface scattering and yield high-fidelity scattering patterns. The application includes surface imaging using x-rays, and critical dimension determination for semiconductor manufacturing.
Software Vulnerabilities to Weakness Mapping. V2W-BERT optimizes the learnable parameters θ of Fθ in two steps. In the first step, the pre-trained BERT language model is further fine-tuned with CVE/CWE descriptions specific to cyber security. In the second step, the trained BERT model is employed in a Siamese network architecture to establish links between CVEs and CWEs. The architecture takes a specific CVE-CWE pair as input and predicts whether the CVE belongs to the CWE or not, with a confidence value. V2W-BERT includes a Mask Language Model (LM) based Reconstruction Decoder to ensure that the descriptions’ contexts are not changed too much during the training process.
Test-grid-buildouts is a set of notebooks for creating buildouts of synthetic transmission grids with various levels of renewable energy. Workflows can be used to augment various test grid with varying levels of wind/solar generation. Aggregated renewable energy time series (actuals and scenarios) at grid buses can then be used for various transmission grid operation problems. Highly customizable workflow consists of parsing of synthetic grid files, setting up SAM & reV simulations, application of exclusion masks, creating of custom renewable generators on the grid, aggregating of power time series, and writing of modified grid description files.
The XRD pipeline software is a program to reduce 2D X-ray diffraction data from area detectors with advanced algorithms on automatic masking and image segmentation, which help characterization of multiple phases recorded in the data and facilitate data analysis.SF-25-114
This project demonstrates, for the first time, the application of simulation-based inference (SBI) techniques to tune neutrino–nucleus interaction models. Using a mock dataset based on the MicroBooNE tuning of the GENIE event generator, our approach employs a Neural Posterior Estimator (NPE) with Masked Autoregressive Flows (MAF) to infer the posterior distributions of key GENIE parameters directly from simulated histograms. The workflow provides a scalable and amortized framework for performing likelihood-free inference in high-dimensional parameter spaces, offering a pathway to more efficient and uncertainty-aware model tuning for next-generation neutrino experiments such as DUNE and SBND.
The software uses a YOLO11 segmentation model trained on synthetic data to analyze APT datasets. The workflow operates as follows: 1. Data Slicing: The APT dataset is divided into multiple 2D cross-sections of a specified thickness. 2. Segmentation: The model identifies point-dense regions within each 2D slice. 3. 3D Reconstruction: Detected regions (masks) from all slices are combined and reconstructed back into the original 3D space, forming clusters. The integration with HPC resources enables the software to process large-scale APT datasets efficiently. This combination of automation and scalability reduces manual intervention, improves reproducibility, and accelerates the clustering workflow.
ADTimePix3 is an open‑source EPICS areaDetector driver for TimePix3 pixel detectors from Advanced Scientific Instruments (ASI). It provides a complete control and data‑acquisition interface between EPICS and the Serval server, supporting both real detectors (single‑chip and 2×2 quad configurations) and the TimePix3 emulator. The driver configures measurements via an HTTP/JSON REST API and acquires data through high‑rate TCP streams for raw events, images, and histograms. It offers real‑time preview and accumulated images, Time‑of‑Flight histogram processing, pixel masking (including Binary Pixel Configuration files and hot‑pixel tools), extensive health and status monitoring, and integration with standard areaDetector plugins for file saving and downstream analysis. ADTimePix3 is designed for Linux 64‑bit systems (tested on Ubuntu and RHEL) and is distributed under an MIT license with additional institutional disclaimers, enabling reuse and extension in photon science beamlines and other TimePix3‑based experimental facilities.
SF-26-118 pySimpleMask is a tool for creating masks and Q-partition maps for X-ray scattering patterns, supporting SAXS, WAXS, and XPCS data reduction. It ships both a desktop GUI and a headless Python API that can drive the full pipeline from scripts.
Abstract The identification of atmospheric rivers (ARs) is crucial for weather and climate predictions as they are often associated with severe storm systems and extreme precipitation, which can cause large impacts on society. This study presents a deep learning model, termed ARDetect, for image segmentation of ARs using ERA5 data from 1960 to 2020 with labels obtained from the TempestExtremes tracking algorithm. ARDetect is a convolutional neural network (CNN)-based U-Net model, with its structure having been optimized using automatic hyperparameter tuning. Inputs to ARDetect were selected to be the integrated water vapor transport (IVT) and total column water (TCW) fields, as well as the AR mask from TempestExtremes from the previous time step to the one being considered. ARDetect achieved a mean intersection-over-union (mIoU) rate of 89.04% for ARs, indicating its high accuracy in identifying these weather patterns and a superior performance than most deep learning–based models for AR detection. In addition, ARDetect can be executed faster than the TempestExtremes method (seconds vs minutes) for the same period. This provides a significant benefit for online AR detection, especially for high-resolution global models. An ensemble of 10 models, each trained on the same dataset but having different starting weights, was used to further improve on the performance produced by ARDetect, thus demonstrating the importance of model diversity in improving performance. ARDetect provides an effective and fast deep learning–based model for researchers and weather forecasters to better detect and understand ARs, which have significant impacts on weather-related events such as floods and droughts.
A composite analysis reveals how the Madden–Julian oscillation (MJO) impacts North American rainfall through perturbations in both the upper-tropospheric flow and regional low-level moisture availability. Upper-level divergence associated with the MJO tropical convection drives a quasi-stationary Rossby wave response to the midlatitudes. This forces a midlatitude upper-level dipolar geopotential height anomaly that is accompanied by a westward retraction of the jet stream and reduced rainfall over the central-eastern North Pacific. A reverse effect is found as the MJO propagates eastward across the Maritime Continent. These large differences in the extratropical upper-level flow, combined with anomalies in the regional supply of water vapor, have a profound impact on southeastern U.S. rainfall. The low-frequency variability, including that associated with ENSO, can modify the seasonal background flow (e.g., El Niño and La Niña basic states) affecting the distribution, strength, and propagation of the intraseasonal oscillation and the extratropical teleconnection patterns. The combined effects of the ENSO and the MJO signals result in both spatial and temporal patterns of interference and modulation of North American rainfall. The results from this study show that during a particular phase of an active MJO, the extratropical response can considerably enhance or mask the interannual ENSO signal in the United States, potentially resulting in anomalies of the opposite sign than that expected during a specific ENSO phase. Analyses of specific MJO events during an El Niño or La Niña episode reveal significant contributions to extreme events via constructive and destructive interference of the MJO and ENSO signals.
An emergent constraint (EC) is a popular model evaluation technique, which offers the potential to reduce intermodel variability in projections of climate change. Two examples have previously been laid out for future surface albedo feedbacks (SAF) stemming from loss of Northern Hemisphere (NH) snow cover (SAF snow ) and sea ice (SAF ice ). These processes also have a modern-day analog that occurs each year as snow and sea ice retreat from their seasonal maxima, which is strongly correlated with future SAF across an ensemble of climate models. The newly released CMIP6 ensemble offers the chance to test prior constraints through out-of-sample verification, an important examination of EC robustness. Here, we show that the SAF snow EC is equally strong in CMIP6 as it was in past generations, while the SAF ice EC is also shown to exist in CMIP6, but with different, slightly weaker characteristics. We find that the CMIP6 mean NH SAF exhibits a global feedback of 0.25 ± 0.05 W m -2 K -1 , or ~61% of the total global albedo feedback, largely in line with prior generations despite its increased climate sensitivity. Additionally, the NH SAF can be broken down into similar contributions from snow and sea ice over the twenty-first century in CMIP6. Crucially, intermodel variability in seasonal SAF snow and SAF ice is largely unchanged from CMIP5 because of poor outlier simulations of snow cover, surface albedo, and sea ice thickness. These outliers act to mask the noted improvement from many models when it comes to SAF ice , and to a lesser extent SAF snow .
Background: Exploring metagenomic contigs and “binning” them into metagenome-assembled genomes (MAGs) are essential for the delineation of functional and evolutionary guilds within microbial communities. Despite the advances in automated binning algorithms, their capabilities in recovering MAGs with accuracy and biological relevance are so far limited. Researchers often find that human involvement is necessary to achieve representative binning results. This manual process however is expertise demanding and labor intensive, and it deserves to be supported by software infrastructure. Results: We present BinaRena, a comprehensive and versatile graphic interface dedicated to aiding human operators to explore metagenome assemblies via customizable visualization and to associate contigs with bins. Contigs are rendered as an interactive scatter plot based on various data types, including sequence metrics, coverage profiles, taxonomic assignments, and functional annotations. Various contig-level operations are permitted, such as selection, masking, highlighting, focusing, and searching. Binning plans can be conveniently edited, inspected, and compared visually or using metrics including silhouette coefficient and adjusted Rand index. Completeness and contamination of user-selected contigs can be calculated in real time. In demonstration of BinaRena’s usability, we show that it facilitated biological pattern discovery, hypothesis generation, and bin refinement in a complex tropical peatland metagenome. It enabled isolation of pathogenic genomes within closely related populations from the gut microbiota of diarrheal human subjects. It significantly improved overall binning quality after curating results of automated binners using a simulated marine dataset. Conclusions: BinaRena is an installation-free, dependency-free, client-end web application that operates directly in any modern web browser, facilitating ease of deployment and accessibility for researchers of all skill levels. The program is hosted at https://github.com/qiyunlab/binarena, together with documentation, tutorials, example data, and a live demo. It effectively supports human researchers in intuitive interpretation and fine tuning of metagenomic data.
Abstract Eye tracking is a useful tool for studying human cognition, both in the laboratory and in real-world applications. However, there are cases in which eye tracking is not possible, such as in high-security environments where recording devices cannot be introduced. After facing this challenge in our own work, we sought to test the effectiveness of using artificial foveation as an alternative to eye tracking for studying visual search performance. Two groups of participants completed the same list comparison task, which was a computer-based task designed to mimic an inventory verification process that is commonly performed by international nuclear safeguards inspectors. We manipulated the way in which the items on the inventory list were ordered and color coded. For the eye tracking group, an eye tracker was used to assess the order in which participants viewed the items and the number of fixations per trial in each list condition. For the artificial foveation group, the items were covered with a blurry mask except when participants moused over them. We tracked the order in which participants viewed the items by moving their mouse and the number of items viewed per trial in each list condition. We observed the same overall pattern of performance for the various list display conditions, regardless of the method. However, participants were much slower to complete the task when using artificial foveation and had more variability in their accuracy. Our results indicate that the artificial foveation method can reveal the same pattern of differences across conditions as eye tracking, but it can also impact participants’ task performance.
We report that from geochemical reactions to proppant emplacement, hydraulic fracturing induces various chemomechanical fracture alterations in shale reservoirs. Hydraulic fracturing through the injection of a vast amount and variety of fluids and proppants has substantial impacts on fluid flow and hydrocarbon production. There is a strong need to improve our understanding on how fracture alterations affect flow pathways within the stimulated rock volume and develop monitoring tools. We have conducted time-lapse rock-physics experiments on clay-rich (carbonate-poor) Marcellus shales to characterize the acoustic velocity and permeability responses to fracture acidizing and propping. Acoustic P- and S-wave velocities and fracture permeability were measured before and after laboratory-induced fracture alterations along with microstructural imaging through X-ray computed tomography and scanning electron microscopy. Our experiments indicate that the S-wave velocity is an important geophysical observable, particularly the S-wave polarized perpendicular to fractures because it is sensitive to fracture stiffness. The acidizing and propping of a fracture decrease its elastic stiffness. This effect is stronger for acidizing, so it is possible that proppant monitoring will be masked by chemical alteration except when propping is highly efficient (i.e., most fractures are propped). However, fracture permeability is undermined by the softening of fracture surfaces due to acidizing, while being greatly enhanced by propping. These contrasting effects on fluid flow in combination with similar seismic attributes indicate the importance of experiments to improve existing rock-physics models, which must include changes to the rock frame. Such improvements are necessary for a correct interpretation of seismic velocity monitoring of flow pathways in stimulated shales.
Includes three different types of stacks, in two folders: "REC_RAW_STACKS.zip" contains: (1) Raw gray-scale reconstructed microCT x-ray scans, in the form of individual stacks per sample. "ML_STACKS.zip" contains: (2) Stacks that have been labeled using a machine-learning mask-RCNN pipeline identifying epidermis, mesophyll, airspace, vascular bundle, and background. (3) Stacks that have stomata locations labeled using a small point. The three types of stacks were used to calculate a variety of anatomical and physiological traits, using ImageJ Macros provided on Github: https://github.com/leakey-lab/microCT-Macros-Fischer. Young leaves from WT and transgenic Sorghum plants. CSV "microCT_REC2_META.csv" contains metadata, including sample/sub-sample labels.
The neutron radiography (nR) dataset provides information of the neutron events as measured for the Siemens star mask using the Timepix3 detector. The recordings consist of the position (x and y axes), the time-stamp, and time-over-threshold (TOT) values of each neutron event.
The data provided this challenge is ice under high pressure measured using the Spallation Neutrons and Pressure Diffractometer (SNAP) at the Spallation Neutron Source (SNS) at Oak Ridge National Laboratory. The data is stored in a hdf5 file following the NeXus standard and can be read with tools built for either. While the NeXus format is self-describing, there is benefit to explaining some details. The data is stored in a single NXdata entry within a single NXentry. The NXdata has several fields denoting the 3-dimensional data (signal), the axes (D0 is the Qx axis, D1 is the Qy axis, and D2 is the Qz axis), and fields for the uncertainties and masking information. The data can be quickly viewed using the LoadMD algorithm and slice viewer in the Mantid workbench https://www.mantidproject.org.