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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 595 records · Page 33
All sourcesNASA NTRSDOE OSTI
DOE OSTI2020

Kinetic modeling of microbial growth, enzyme activity, and gene deletions: An integrated model of β-glucosidase function in Cellvibrio japonicus

Understanding the complex growth and metabolic dynamics in microorganisms requires advanced kinetic models containing both metabolic reactions and enzymatic regulation to predict phenotypic behaviors under different conditions and perturbations. Most current kinetic models lack gene expression dynamics and are separately calibrated to distinct media, which consequently makes them unable to account for genetic perturbations or multiple substrates. This challenge limits our ability to gain a comprehensive understanding of microbial processes towards advanced metabolic optimizations that are desired for many biotechnology applications. Here, we present an integrated computational and experimental approach for the development and optimization of mechanistic kinetic models for microbial growth and metabolic and enzymatic dynamics. Our approach integrates growth dynamics, gene expression, protein secretion, and gene-deletion phenotypes. We applied this methodology to build a dynamic model of the growth kinetics in batch culture of the bacterium Cellvibrio japonicus grown using either cellobiose or glucose media. The model parameters were inferred from an experimental data set using an evolutionary computation method. The resulting model was able to explain the growth dynamics of C. japonicus using either cellobiose or glucose media and was also able to accurately predict the metabolite concentrations in the wild-type strain as well as in β-glucosidase gene deletion mutant strains. We validated the model by correctly predicting the non-diauxic growth and metabolite consumptions of the wild-type strain in a mixed medium containing both cellobiose and glucose, made further predictions of mutant strains growth phenotypes when using cellobiose and glucose media, and demonstrated the utility of the model for designing industrially-useful strains. Importantly, the model is able to explain the role of the different β-glucosidases and their behavior under genetic perturbations. Here, this integrated approach can be extended to other metabolic pathways to produce mechanistic models for the comprehensive understanding of enzymatic functions in multiple substrates.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2024

An efficient cre‐based workflow for genomic integration and expression of large biosynthetic pathways in Eubacterium limosum

Abstract Acetogenic Clostridia are obligate anaerobes that have emerged as promising microbes for the renewable production of biochemicals owing to their ability to efficiently metabolize sustainable single‐carbon feedstocks. Additionally, Clostridia are increasingly recognized for their biosynthetic potential, with recent discoveries of diverse secondary metabolites ranging from antibiotics to pigments to modulators of the human gut microbiota. Lack of efficient methods for genomic integration and expression of large heterologous DNA constructs remains a major challenge in studying biosynthesis in Clostridia and using them for metabolic engineering applications. To overcome this problem, we harnessed chassis‐independent recombinase‐assisted genome engineering (CRAGE) to develop a workflow for facile integration of large gene clusters (>10 kb) into the human gut acetogen Eubacterium limosum . We then integrated a non‐ribosomal peptide synthetase gene cluster from the gut anaerobe Clostridium leptum , which previously produced no detectable product in traditional heterologous hosts. Chromosomal expression in E. limosum without further optimization led to production of phevalin at 2.4 mg/L. These results further expand the molecular toolkit for a highly tractable member of the Clostridia, paving the way for sophisticated pathway engineering efforts, and highlighting the potential of E. limosum as a Clostridial chassis for exploration of anaerobic natural product biosynthesis.

Sanford, Patrick A.↗
DOE OSTI2021

Integrated Capture and Conversion of CO 2 to Methane Using a Water-lean, Post-Combustion CO 2 Capture Solvent

Integrated Carbon Capture and Conversion of CO 2 into materials (IC3M) is an attractive solution to meet the global energy demand, reduce our dependence on fossil fuels and lower CO 2 emissions. In this work, using a water-lean post combustion capture solvent, (N-(2-ethoxyethyl)-3-morpholinopropan-1-amine) (2-EEMPA), >90% conversion of captured CO2 to hydrocarbons, mostly methane, is achieved in the presence of a heterogenous Ru catalysts under relatively mild reaction conditions (170 °C and <15 bar H 2 pressure). The catalytic performance was better in 2-EEMPA than aqueous 5M monoethanol amine (MEA). Operando NMR study showed in-situ formation of N-formamide intermediate, which underwent further hydrogenation to form methane and other higher hydrocarbons. The technoeconomic analyses (TEA) showed that the proposed integrated process can potentially improve the thermal efficiency by 5% and reduce the total capital investment and minimum synthetic natural gas (SNG) selling price by 32% and 12% respectively compared to conventional Sabatier process, highlighting the energetic and economic benefits of integrated capture and conversion. Methane derived from CO 2 and renewable H 2 source is an attractive fuel, and it has a great potential as a renewable hydrogen carrier as an environmentally responsible carbon capture and utilization approach.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2024

Advancing an integrated understanding of land–ocean connections in shaping the marine ecosystems of coastal temperate rainforest ecoregions

Land and ocean ecosystems are strongly connected and mutually interactive. As climate changes and other anthropogenic stressors intensify, the complex pathways that link these systems will strengthen or weaken in ways that are currently beyond reliable prediction. In this review we offer a framework of land–ocean couplings and their role in shaping marine ecosystems in coastal temperate rainforest (CTR) ecoregions, where high freshwater and materials flux result in particularly strong land–ocean connections. Using the largest contiguous expanse of CTR on Earth—the Northeast Pacific CTR (NPCTR)—as a case study, we integrate current understanding of the spatial and temporal scales of interacting processes across the land–ocean continuum, and examine how these processes structure and are defining features of marine ecosystems from nearshore to offshore domains. We look ahead to the potential effects of climate and other anthropogenic changes on the coupled land–ocean meta-ecosystem. Finally, we review key data gaps and provide research recommendations for an integrated, transdisciplinary approach with the intent to guide future evaluations of and management recommendations for ongoing impacts to marine ecosystems of the NPCTR and other CTRs globally. In the light of extreme events including heatwaves, fire, and flooding, which are occurring almost annually, this integrative agenda is not only necessary but urgent.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2025

Architectural Approaches for Integrating ADMS and DERMS: Challenges, Comparisons, and Real-World Use Cases

The electrical distribution landscape is rapidly transforming due to the proliferation of distributed energy resources (DERs) such as solar panels, wind turbines, battery storage systems, combined heat and power units, and electric vehicles, introducing variability and uncontrollability that traditional grid operators are ill-equipped to manage. This transformation is further accelerated by advancements in Information and Communication Technology infrastructure that connects control centers with end devices, demanding automation and a deeper understanding of new technologies by utility personnel. Advanced grid control techniques using system-level optimization, Artificial Intelligence, and Machine Learning at the enterprise level and distributed level are evolving to address these issues. There is also an opportunity to utilize the enormous data created by these new DER technologies in the grid. Advanced Distribution Management Systems (ADMS) and Distributed Energy Resource Management Systems (DERMS) are critical in addressing these challenges by automating grid operations and enhancing reliability. Given the relatively recent development of ADMS and DERMS, and the still relatively low level of ADMS and DERMS deployment in the industry, there is a notable deficiency in the comprehensive understanding of the challenges and benefits associated with these new technologies, especially with their complementary natures and integration architectures. This paper aims to bridge the knowledge gap in ADMS and DERMS integration, presenting three distinct integration architectures currently available, and discussing the challenges and benefits of each architecture to guide utilities, industry professionals, and researchers in optimizing grid management and decision-making processes for a resilient and efficient energy future.

24 POWER TRANSMISSION AND DISTRIBUTION↗
DOE OSTI2020

Towards the Reconstruction of Integrated Genome-Scale Models of Metabolism and Gene Expression

The reconstruction of integrated genome-scale models of metabolism and gene expression has been a challenge for a while now. In fact, various methods that allow integrating reconstructions of Transcriptional Regulatory Networks, gene expression data or both into Genome-Scale Metabolic Models have been proposed. Several of these methods are surveyed in this article, which allowed identifying their strengths and weaknesses concerning the reconstruction of integrated models for multiple prokaryotic organisms. Additionally, the main resources of regulatory information were also surveyed, as the existence of novel sources of regulatory information and gene expression data may contribute for the improvement of methodologies referred herein.

Databases of regulatory information↗
DOE OSTI2020

Automated Integration of Continental-Scale Observations in Near-Real Time for Simulation and Analysis of Biosphere–Atmosphere Interactions

The National Ecological Observatory Network (NEON) is a continental-scale observatory with sites across the US collecting standardized ecological observations that will operate for multiple decades. To maximize the utility of NEON data, we envision edge computing systems that gather, calibrate, aggregate, and ingest measurements in an integrated fashion. Edge systems will employ machine learning methods to cross-calibrate, gap-fill and provision data in near-real time to the NEON Data Portal and to High Performance Computing (HPC) systems, running ensembles of Earth system models (ESMs) that assimilate the data. For the first time gridded EC data products and response functions promise to offset pervasive observational biases through evaluating, benchmarking, optimizing parameters, and training new machine learning parameterizations within ESMs all at the same model-grid scale. Leveraging open-source software for EC data analysis, we are already building software infrastructure for integration of near-real time data streams into the International Land Model Benchmarking (ILAMB) package for use by the wider research community. We will present a perspective on the design and integration of end-to-end infrastructure for data acquisition, edge computing, HPC simulation, analysis, and validation, where Artificial Intelligence (AI) approaches are used throughout the distributed workflow to improve accuracy and computational performance.

Durden, David J.↗
DOE OSTI2023

Loop-by-loop differential equations for dual (elliptic) Feynman integrals

We present a loop-by-loop method for computing the differential equations of Feynman integrals using the recently developed dual form formalism. We give explicit prescriptions for the loop-by-loop fibration of multi-loop dual forms. Then, we test our formalism on a simple, but non-trivial, example: the two-loop three-mass elliptic sunrise family of integrals. We obtain an ε-form differential equation within the correct function space in a sequence of relatively simple algebraic steps. In particular, none of these steps relies on the analysis of q-series. Then, we discuss interesting properties satisfied by our dual basis as well as its simple relation to the known ε-form basis of Feynman integrands. The underlying K3-geometry of the three-loop four-mass sunrise integral is also discussed. Finally, we speculate on how to construct a “good” loop-by-loop basis at three-loop.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2021

Coaction and double-copy properties of configuration-space integrals at genus zero

We investigate configuration-space integrals over punctured Riemann spheres from the viewpoint of the motivic Galois coaction and double-copy structures generalizing the Kawai-Lewellen-Tye (KLT) relations in string theory. For this purpose, explicit bases of twisted cycles and cocycles are worked out whose orthonormality simplifies the coaction. We present methods to efficiently perform and organize the expansions of configuration-space integrals in the inverse string tension α' or the dimensional-regularization parameter ϵ of Feynman integrals. Generating-function techniques open up a new perspective on the coaction of multiple polylogarithms in any number of variables and analytic continuations in the unintegrated punctures. We present a compact recursion for a generalized KLT kernel and discuss its origin from intersection numbers of Stasheff polytopes and its implications for correlation functions of two-dimensional conformal field theories. We find a non-trivial example of correlation functions in (p, 2) minimal models, which can be normalized to become uniformly transcendental in the p → ∞ limit.

Conformal Field Theory↗
DOE OSTI2026

Global symmetry and integral constraint on superconformal lines in four dimensions

We study properties of point-like impurities preserving flavor symmetry and supersymmetry in four-dimensional 𝒩 = 2 field theories. At large distances, such impurities are described by half-BPS superconformal line defects. By working in the AdS 2 × S 2 conformal frame, we develop a novel and simpler way of deriving the superconformal Ward identities relating the various two-point functions of flavor current multiplet operators in the presence of the defect. We use these relations to simplify a certain integrated two-point function of flavor current multiplet operators that, in Lagrangian theories, can be computed using supersymmetric localization. The simplification gives an integral constraint on the two-point function of the flavor current multiplet superconformal primary with trivial integration measure in the AdS 2 × S 2 conformal frame. We provide several consistency checks on our Ward identities.

extended supersymmetry↗
DOE OSTI2025

The phase of the gravitational path integral

The gravitational path integral on S 2 × S 2 can be interpreted either as evaluating a contribution to the norm of the Hartle-Hawking wavefunction conditional on spatial S 1 × S 2 topology, or the pair creation rate of black holes in de Sitter. Both interpretations are distinguished at the quantum level. The former requires the path integral to be real and the latter to be imaginary. We develop a formalism to efficiently compute the phase of the gravitational path integral on Einstein spaces. We apply it to a broad class of spacetimes and in particular S 2 × S D−2 , finding it to be real and positive. We generalize some of the analysis to cases with charge and rotation.

AdS-CFT correspondence↗
DOE OSTI2022

Complex saddles and Euclidean wormholes in the Lorentzian path integral

We study complex saddles of the Lorentzian path integral for 4D axion gravity and its dual description in terms of a 3-form flux, which include the Giddings-Strominger Euclidean wormhole. Transition amplitudes are computed using the Lorentzian path integral and with the help of Picard-Lefschetz theory. The number and nature of saddles is shown to qualitatively change in the presence of a bilocal operator that could arise, for example, as a result of considering higher-topology transitions. We also analyze the stability of the Giddings-Strominger wormhole in the 3-form picture, where we find that it represents a perturbatively stable Euclidean saddle of the gravitational path integral. This calls into question the ultimate fate of such solutions in an ultraviolet-complete theory of quantum gravity.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2022

Integrating out beyond tree level and relativistic superfluids

We revisit certain subtleties of renormalization that arise when one derives a low-energy effective action by integrating out the heavy fields of a more complete theory. Usually these subtleties are circumvented by matching some physical observables, such as scattering amplitudes, but a more involved procedure is required if one is interested in deriving the effective theory to all orders in the light fields (but still to fixed order in the derivative expansion). As a concrete example, we study the U(1) Goldstone low-energy effective theory that describes the spontaneously broken phase of a $\phi$ 4 theory for a complex scalar. Working to lowest order in the derivative expansion, but to all orders in the Goldstones, we integrate out the radial mode at one loop and express the low-energy effective action in terms of the renormalized couplings of the UV completion. This yields the one-loop equation of state for the superfluid phase of (complex) $\phi$ 4 . We perform the same analysis for a renormalizable scalar SO(N) theory at finite chemical potential, integrating out the gapped Goldstones as well, and confirm that the effective theory for the gapless Goldstone exhibits no obvious sign of the original SO(N) symmetry.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2020

Master integrals for two-loop QCD corrections to quark quasi PDFs

We compute the master integrals for the two-loop QCD corrections to quark quasi parton distribution functions (PDFs) in the large momentum effective theory (LaMET). With a proper canonical basis, we derive the analytical results for the three families of master integrals using the method of differential equations. The final expressions for the master integrals are given in terms of Goncharov polylogarithms. These results allow us to extract the two-loop short-distant matching coefficients between quark quasi and lightcone PDFs in LaMET, and are valuable to improve the determination of the nucleon PDFs from first principles in future.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2024

Integrating the full four-loop negative geometries and all-loop ladder-type negative geometries in ABJM theory

The decomposition of the four-point ABJM amplituhedron into negative geometries produces compact integrands of logarithmic of amplitudes such that the infrared divergence only comes from the last loop integration, from which we can compute the cusp anomalous dimension of the ABJM theory. In this note, we integrate L – 1 loop momenta of the L-loop negative geometries for all four-loop negative geometries and a special class of all-loop ladder-type negative geometries by a method based on Mellin transformation, and from these finite quantities we extract the corresponding contribution to the cusp anomalous dimension. We find that the infrared divergence of a box-type negative geometry at L = 4 is weaker than other negative geometries, then only tree-type negative geometries contribute to the cusp anomalous dimension at L = 4. For the all-loop ladder-type negative geometries, we prove and conjecture some recursive structures as integral equations in Mellin space and find that they cannot contribute zeta values like ζ 3 , ζ 5 to the cusp anomalous dimension.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2020

Uncertainty-based weighted least squares density integration for background-oriented schlieren

We propose an improved density integration methodology for Background-Oriented Schlieren (BOS) measurements that overcomes the noise sensitivity of the commonly used Poisson solver. Here, the method employs a weighted least-squares (WLS) optimization of the 2D integration of the density gradient field by solving an over-determined system of equations. Weights are assigned to the grid points based on density gradient uncertainties to ensure that a less reliable measurement point has less effect on the integration procedure. Synthetic image analysis with a Gaussian density field shows that WLS constrains the propagation of random error and reduces it by 80% in comparison to Poisson for the highest noise level. Using WLS with experimental BOS measurements of flow induced by a spark plasma discharge shows a 30% reduction in density uncertainty in comparison to Poisson, thereby increasing the overall precision of the BOS density measurements.

42 ENGINEERING↗
DOE OSTI2025

Material extrusion with integrated compression molding of NdFeB/SmFeN nylon bonded magnets using small- and large-scale pellet-based 3D-printers

High-density bonded rare-earth magnets are manufactured using pellet-fed additive manufacturing (AM)/material extrusion and an integrated additive manufacturing-compression molding (AM-CM) process. Neodymium iron boron – samarium iron nitride in polyamide 12 (NdFeB-SmFeN/PA12) of 93 % weight fraction (65 % volume fraction) are used for the study. The mechanical properties (tensile strength and modulus), magnetic properties (maximum energy density, coercivity, remanence) are reported. Manufacturing parameters such as layer height, barrel temperatures, screw speed and gantry feed rate are optimized to obtain the highest possible density of the magnets using a small-scale desktop material extrusion printer. Large scale integrated additive manufacturing-compression molding (AM-CM) is then utilized to increase the density of the magnets by reducing porosity defects common in the material extrusion process. The density of as-printed magnets was 5.2 g/cm 3 with a BH max value of 124.14 kJ/m 3 , tensile strength of 20 MPa and a modulus of 2 GPa. AM-CM increased the density of the compound by 5.5 % (5.49 g/cm 3 ). The reduction in porosity was confirmed using X-ray tomography (XCT). Improvement in mechanical strength of the material was also observed, with an increase in tensile strength of 25 % (25.09 MPa) and increase in tensile modulus of 275 % (5.49 GPa). Scanning electron microscopy showed increased particle-matrix adhesion with the integrated AM-CM process.

36 MATERIALS SCIENCE↗
DOE OSTI2024

AFM Special Issue Summary - Integrating Surface Flux with Boundary Layer Measurements

To help bridge science topics related to land-atmosphere interactions, we organized a virtual special issue in this journal (Agricultural and Forest Meteorology [AFM]) entitled, “Land-Atmosphere Interactions: Integrating Surface Flux with Boundary Layer Measurements.” The motivation for the special issue was driven by existing disciplinary barriers between research areas that all address land-atmosphere interactions. In particular, it addressed research silos between those who study features of the land surface, surface fluxes (including water, energy, and trace gases), atmospheric boundary layer growth and thermodynamics, and atmospheric composition and aerosols. The special issue sought to bring these communities together to integrate multiple observations across the soil-vegetation-atmosphere continuum with the aim of 1) improving broader understanding of land-atmosphere interactions, feedbacks, and coupling, 2) fostering new collaborations between atmospheric and surface flux scientists, and 3) identifying new paths for integrative research. In this report we provide an overview and synthesis of the special issue.

58 GEOSCIENCES↗