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DOE OSTI2021

Recent Progress in Electron Scattering at SLAC

Since the last meeting in this conference series in Paris in 1981, there has been major progress in electron scattering at SLAC on several fronts. A new experiment on ep elastic scattering at large momentum transfer, Experiment El36, has recently completed data taking. A new measurement of deep inelastic electron scattering from nuclear targets, Experiment El39, has been completed and preliminary results are available. A new program of experiments has begun, called Nuclear Physics at SLAC (NPAS), that will use a new injector on the SLAC linac to provide high intensity beams in the energy range from 0.5 to 6 GeV.

43 PARTICLE ACCELERATORS↗

DOE OSTI2020

Two new SciDAC institutes promote mathematical tools and software technology for high-performance computing

Bigger is often said to be better, and the newest extreme-scale computers certainly are bigger, with millions of processing units. Moreover, the breadth of science performed on the U.S. Department of Energy (DOE) computing facilities is expanding, with new technology such as artificial intelligence emerging. These advances are exciting, creating new opportunities for scientific discovery; however, they also raise new questions for scientists who want to exploit these advances for tackling more complex problems. Will my simulation code be able to utilize the accelerators in extreme-scale computing systems? Can I take advantage of the deepening memory hierarchy in heterogeneous processors? Is there a way around bottlenecks caused by the widening ratio of peak floating-point operations per second to I/0 bandwidth? How can I manage my huge amounts of data effectively? Can I analyze data in situ, or must I transfer it to offline storage for later analysis? To address such questions, DOE announced that it is providing $57.5 million over the next five years for two multidisciplinary teams — FASTMath and RAPIDS2 — to develop new tools and techniques to harness supercomputers for scientific discovery. The teams, called SciDAC Institutes, are part of the Scientific Discovery through Advanced Computing program.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2020

Effects of Jacobian Matrix Regularization on the Detectability of Adversarial Samples

The well-known vulnerability of Deep Neural Networks to adversarial samples has led to a rapid cycle of increasingly sophisticated attack algorithms and proposed defenses. While most contemporary defenses have been shown to be vulnerable to carefully configured attacks, methods based on gradient regularization and out-of-distribution detection have attracted much interest recently by demonstrating higher resilience to a broad range of attack algorithms. However, no study has yet investigated the effect of combining these techniques. In this paper, we consider the effect of Jacobian matrix regularization on the detectability of adversarial samples on the CIFAR-10 image benchmark dataset. We find that regularization has a significant effect on detectability, and in some cases can make an undetectable attack on a baseline model detectable. In addition, we give evidence that regularization may mitigate the known weaknesses of detectors to high-confidence adversarial samples. The defenses we consider here are highly generalizable, and we believe they will be useful for further investigations to transfer machine learning robustness to other data domains.

45 MILITARY TECHNOLOGY, WEAPONRY, AND NATIONAL DEF↗

DOE OSTI2020

MEASUREMENT OF Fn 2 /Fp 2 FROM DEEP INELASTIC ELECTRON SCATTERING OFF A=3 MIRROR NUCLEI AT JEFFERSON LAB

This research is part of the Je?erson Lab MARATHON experiment (MeAsurement of the Fn 2 /Fp 2 , d/u RAtios and A = 3 EMC E?ect in Deep Inelastic Electron Scattering Off the Tritium and Helium MirrOr Nuclei). MARATHON is an experiment on electron deep inelastic scattering off the 3H, 3He mirror nuclei. It has extracted, from the measured deep inelastic scattering cross section ratio o? 3H and 3He, the ratio of the neutron to proton inelastic structure functions Fn 2 /Fp 2 . The extraction has taken advantage of the isospin symmetry of the A = 3 mirror nuclei within a novel technique, which avoids the theoretical uncertainties that are present in the SLAC experiments of the 1970s, which used hydrogen and deuterium targets. The experiment was performed using the upgraded 11 GeV beam of the Jefferson Lab electron accelerator, the Hall A Experimental Facility, and a newly designed cryogenic, high-pressure gas target system containing 3H and 3He cells. Electrons scattered o? the gas targets were detected in the two superconducting, high-resolution magnetic spectrometers of Hall A. The cross section data cover the four-momentum transfer squared range 2.0 < Q2 < 14.0 (GeV/c)2, and the Bjorken x scaling variable range 0.19 < x < 0.83. The experiment also measured, for calibration purposes, electron deep inelastic scattering off hydrogen and deuterium at selected kinematics.

Su, Tong↗

DOE OSTI2022

Combustion characteristics and detailed simulations of surrogates for a Tier II gasoline certification fuel

An experimental and numerical study of combustion of a gasoline certification fuel (‘indolene’), and four (S4) and five (S5) component surrogates for it, is reported for the configurations of an isolated droplet burning with near spherical symmetry in the standard atmosphere, and a single cylinder engine designed for advanced compression ignition of pre-vaporized fuel. The intent was to compare performance of the surrogate for these different combustion configurations and to assess the broader applicability of the kinetic mechanism and property database for the simulations. A kinetic mechanism comprised of 297 species and 16797 reactions was used in the simulations that included soot chemistry and accounted for unsteady transport, liquid diffusion inside the droplet, radiative heat transfer, and variable properties. The droplet data showed a clear preference for the S5 surrogate in terms of burning rate. The simulations showed generally very good agreement with measured droplet, flame, and soot shell diameters. Measurements of combustion timing, in-cylinder pressure, and mass-averaged gas temperature were also well predicted with a slight preference for the S5 surrogate. Preferential vaporization was not evidenced from the evolution of droplet diameter but was clearly revealed in simulations of the evolution of mixture fractions inside the droplets. The influence of initial droplet diameter (Do) on droplet burning was strong, with S5 burning rates decreasing with increasing Do due to increasing radiation losses from the flame. Flame extinction was predicted for Do =3.0 mm as a radiative loss mechanism but not predicted for smaller Do for the conditions of the simulations.

Guo, Songtao↗

DOE OSTI2023

Hardware assisted fine-grained data movement

A processor includes a task scheduling unit and a compute unit coupled to the task scheduling unit. The task scheduling unit performs a task dependency assessment of a task dependency graph and task data requirements that correspond to each task of the plurality of tasks. Based on the task dependency assessment, the task scheduling unit schedules a first task of the plurality of tasks and a second proxy object of a plurality of proxy objects specified by the task data requirements such that a memory transfer of the second proxy object of the plurality of proxy objects occurs while the first task is being executed.

Hassaan, Muhammad Amber↗

DOE OSTI2024

Measurement of the t-dependence of the Beam Asymmetry of Photoproduced eta at the GlueX Experiment at Jefferson Lab

We report on the photoproduction of eta mesons studied at the GlueX experiment at Thomas Jefferson National Laboratory in Newport News, VA. A linearly polarized photon beam at energies between 8.2 and 8.8 GeV, incident on a liquid hydrogen target, produces eta dominantly through t-channel exchanges. Azimuthal angular distributions of the eta, for the direction of the polarized photon, facilitate the extraction of the beam asymmetry Sigma for the reaction gamma p -> eta p. We can understand the production mechanisms of the eta by analyzing Sigma_eta, which is sensitive to the particles exchanged. Compared to previous GlueX results [[4],[17]], we have access to five times the statistics, thereby allowing us to extend these measurements to values beyond the previous limitation of -t lte 1.1 (GeV)2. Results will be shown for events reconstructed from the decay of eta -> gamma gamma and eta -> pi^+ pi^- pi^0 Systematic checks are also made for the neutral mode decay to confirm the stability of the extracted results. We find through data binned up to a momentum transfer of 2.0 (GeV)2 that the photoproduction of eta at these beam energies is largely carried out by natural processes, with a preliminary comparison with the photoproduction of eta' suggesting possible strangeness exchanges at wider kinematic regions.

Erbora, Tolga↗

DOE OSTI2024

Hardware assisted fine-grained data movement

Hassaan, Muhammad Amber↗

DOE OSTI2021

Initial use of Nek5000/Cardinal to improve closure models in Pronghorn

Heat transfer coefficient closure models for pebble bed reactors are built using a data-driven approach by leveraging the capabilities of an Evolutionary Algorithm entitled Particle Swarm Optimization (PSO). In the present work, the Computational Fluid Dynamics code nekRS was used in order to collect the high-fidelity flow data for a core with 1,568 pebbles. To characterize the heat transfer, multiple concentric regions were considered to extract the physical quantities of interest, e.g./ the Reynolds number. The PSO algorithm is employed as part of an inverse problem targeting determine what are the coefficients for a Nusselt number correlation to match the collected data. Such correlation should follow any given format that is defined a priori. Finally, two correlations are proposed, one with an implicit dependence on the pebbles’ wall temperatures and another expressed as a fully explicit correlation depending on the flow conditions and the position within the core. Anyway, given the generic nature of the proposed approach, correlations following different formats could be tested. Preliminary results for the high-fidelity simulation of a fast MSR core are presented. The target Reynolds number is currently 20K, with the expectation that this will increase, pending the availability of further computational resources. These simulations will be used to inform lower fidelity models, including a coarse CFD turbulence model in Pronghorn. Additionally, they will serve as a reference for the RANS models in Nek5000/NekRS.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

DOE OSTI2021

Nuclear Data Sheets for A=194

Experimental nuclear structure and decay data are evaluated for all of 14 known nuclides of mass 194 (Ta, W, Re, Os, Ir, Pt, Au, Hg, Tl, Pb, Bi, Po, At, Rn). Detailed evaluated spectroscopic information is presented for each reaction and decay experiment, and by combining all the available data, recommended values are provided for energies, spins and parities and half-lives of levels, together with energies, branching ratios and multipolarities of gamma radiations from the levels, and characteristics of beta and alpha radiations in radioactive decays. No excited states have yet been identified in 194 Ta, 194 W, and 194 Rn. Only limited spectroscopic data are available for 194 Re, with a 45–μs isomer identified, but its absolute energy yet to be determined. Only two levels at unknown absolute energies are reported for 194 At, both of which are isomeric but neither can be unambiguously identified as the ground state. Data are scarce for 194 Os, 194 Bi and 194 Po, while 194 Pt, 194 Au, 194 Hg, 194 Tl and 194 Pb are well studied through decays and reactions. For 194 Ir, although a major (n, γ), E=thermal study and two particle-transfer studies provide large amounts of spectral data, still several problematic issues are found in the assignment of multipolarities for the secondary gamma transitions in the (n, γ) study by 2008Ba25, 1998Ba85 and 1998Ba42, all from the same group. Some issues have been resolved by the evaluators, but we suggest that further experimental work is needed on 194 Ir structure to resolve standing issues, and verify the conclusions made by 2008Ba25. Furthermore, our attempt to contact the prime authors of the 2008Ba25 paper was not successful. The present work supersedes all the earlier evaluations of A=194 nuclides by 2006Si17, 1996Br26, 1989Si01 and 1972Au11.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

DOE OSTI2020

Data-driven modeling and control of dynamical systems using Koopman and Perron-Frobenius operators

This dissertation studies the data-driven modeling and control problem of nonlinear systems by exploiting the linear operator theoretic framework involving Koopman and Perro-Frobenius operator. A systematic linear-operator based controller design procedure has been established, which can be used to solve a variety of nonlinear control problems, including feedback stabilization using control Lyapunov functions, optimal quadratic regulation using Koopman eigenfunctions and convex optimization formulation of optimal control problem using P-F and Koopman operator approximation. As the core of data-driven modeling, we first propose a new algorithm for the finite-dimensional approximation of the linear transfer Koopman and Perron-Frobenius operator from time-series data. We argue that the existing approach for the finite-dimensional approximation of these transfer operators such as Dynamic Mode Decomposition (DMD) and Extended Dynamic Mode Decomposition (EDMD) do not capture two important properties of these operators, namely positivity and Markov property. The algorithm we propose preserves these two properties. We call the proposed algorithm as naturally structured DMD (NSDMD) since it retains the inherent properties of these operators. Naturally structured DMD algorithm leads to a better approximation of the steady-state dynamics of the system regarding computing Koopman and Perron- Frobenius operator eigenfunctions and eigenvalues. However, preserving positivity property is critical for capturing the real transient dynamics of the system. This positivity property of the transfer operators and it's finite-dimensional approximation play an important role for controller and estimator design of nonlinear systems. To solve the feedback stabilization problem for nonlinear control systems, we tried to take advantage of the Koopman operator framework. The Koopman operator approach provides a linear representation for a nonlinear dynamical system and a bilinear representation for a nonlinear control system. The problem of feedback stabilization of a nonlinear control system is then transformed to the stabilization of a bilinear control system. We propose a control Lyapunov function (CLF)-based approach for the design of stabilizing feedback controllers for the bilinear system. The search for finding a CLF for the bilinear control system is formulated as a convex optimization problem. This leads to a schematic procedure for designing CLF-based stabilizing feedback controllers for the bilinear system and hence the original nonlinear system. Another advantage of the proposed controller design approach outlined in this dissertation is that it does not require explicit knowledge of system dynamics. In particular, the bilinear representation of a nonlinear control system in the Koopman eigenfunction space can be obtained from time-series data. Next, we study the optimal quadratic regulation problem for nonlinear systems. The linear operator theoretic framework involving the Koopman operator is used to lift the dynamics of nonlinear control system to an infinite-dimensional bilinear system. The optimal quadratic regulation problem for nonlinear system is formulated in terms of the finite-dimensional approximation of the bilinear system. A convex optimization-based approach is proposed for solving the quadratic regulator problem for bilinear system. We applied a variety of examples and compared the simulation results between our framework and conventional LQR control using linearized model. For more general optimal control problems, we provide a density-function based convex formulation for the optimal control problem of the nonlinear system. The convex formulation relies on the duality result in the stability theory of a dynamical system involving density function and Perron-Frobenius operator. The optimal control problem is formulated as an infinite-dimensional convex optimization program. The finite-dimensional approximation of the optimization problem relies on the recent advances made in the data-driven computation of the Koopman operator, which is dual to the Perron-Frobenius operator. Simulation results are presented to demonstrate the application of the developed framework.

Huang, Bowen↗

DOE OSTI2025

Measurement of spin-density matrix elements in Δ ++ (1232) photoproduction

We measure the spin-density matrix elements (SDMEs) of the Δ ++ (1232) in the photoproduction reaction γp → π - Δ ++ (1232) with the GlueX experiment in Hall D at Jefferson Lab. The measurement uses a linearly–polarized photon beam with energies from 8.2 to 8.8 GeV and the statistical precision of the SDMEs exceeds the previous measurement by three orders of magnitude for the momentum transfer squared region below 1.4 GeV2. The data are sensitive to the previously undetermined relative sign between couplings in existing Regge-exchange models. Linear combinations of the extracted SDMEs allow for a decomposition into natural and unnatural–exchange amplitudes. We find that the unnatural exchange plays an important role in the low momentum transfer region.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

DOE OSTI2021

Liquid–Liquid Microfluidic Flows for Ultrafast 5-Hydroxymethyl Furfural Extraction

We study the effects of liquid–liquid flow patterns on the extraction of 5-hydroxymethyl furfural from the aqueous phase into an organic phase (methyl isobutyl ketone, ethyl acetate, and 2-pentanol) at ultrashort residence times of 0.2–20 s in a coiled capillary microchannel. Slug, droplet, slug-droplet, dispersed, parallel, annular, and irregular two-phase flow patterns are generated. We evaluate the extraction efficiency and the volumetric mass transfer coefficient via experiments and computational fluid dynamics (CFD). The CFD predictions are in quantitative agreement with the experimental data. The convective and diffusive contributions to the mass transfer of different flow patterns are analyzed. For all solvent pairs, the extraction efficiency varies irregularly with increasing flow rate due to changes in the mass transfer mechanism caused by a transition between flow regimes. Overall, we demonstrate >90% extraction efficiencies with high volumetric mass transfer coefficients ranging from 0.006 to 2.17 s–1. Furthermore, a merit index is defined to assess the trade-off between the fast mass transfer and the pressure drop in biphasic microchannels. In general, the mass transfer rate increases significantly at high flow rates at the expense of a high-pressure drop. Furthermore, the ethyl acetate/water irregular flow pattern is optimal due to a large throughput, extraction efficiency, and mass transfer coefficient, with a minimal pressure drop.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2022

Representations and strategies for transferable machine learning improve model performance in chemical discovery

Strategies for machine-learning (ML)-accelerated discovery that are general across material composition spaces are essential, but demonstrations of ML have been primarily limited to narrow composition variations. By addressing the scarcity of data in promising regions of chemical space for challenging targets such as open-shell transition-metal complexes, general representations and transferable ML models that leverage known relationships in existing data will accelerate discovery. Over a large set (~1000) of isovalent transition-metal complexes, we quantify evident relationships for different properties (i.e., spin-splitting and ligand dissociation) between rows of the Periodic Table (i.e., 3d/4d metals and 2p/3p ligands). We demonstrate an extension to the graph-based revised autocorrelation (RAC) representation (i.e., eRAC) that incorporates the group number alongside the nuclear charge heuristic that otherwise overestimates dissimilarity of isovalent complexes. To address the common challenge of discovery in a new space where data are limited, we introduce a transfer learning approach in which we seed models trained on a large amount of data from one row of the Periodic Table with a small number of data points from the additional row. We demonstrate the synergistic value of the eRACs alongside this transfer learning strategy to consistently improve model performance. Analysis of these models highlights how the approach succeeds by reordering the distances between complexes to be more consistent with the Periodic Table, a property we expect to be broadly useful for other material domains.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2025

PPI DataHub Project Data Package: S. elongatus PCC 7942 Limited Proteolysis and Thermal Proteome Profiling Structural Proteomics (JM-PB-DP3)

The purpose of this experiment was to investigate structural alterations in proteins involved in central carbon metabolism and photosynthetic electron transfer pathways in Synechococcus elongatus PCC 7942. Sample data was obtained from S. elongatus cell lysates using three complementary mass spectrometry (MS) techniques using limited proteolysis (LiP-MS), thermal proteome profiling (TPP-MS), and redox enrichment (Redox-MS) in evaluating alterations solvent accessibility and structural stability caused by light perturbation at the molecular level. Experimentally processed sample data for LiP and TPP proteomic datasets were derived from the same cell culture stock, prepared simultaneously in parallel, and acquired by mass spectrometry. Processed datasets are openly accessible from the download button and contain secondary processed proteomic results files, computed outputs, and supporting metadata materials. Experimental samples processed for LiP-MS label-free quantification (LFQ) or TPP-MS tandem mass tag (TMT) 10-plex were acquired using a Q-Exactive HF-X mass spectrometer and processed/compiled using either MSGF+ (v2024.03.26) or PlexedPiper for proteome evaluation. Additional software supporting downstream proteomic analysis include FragPipe (v.4.0), MSFragger (v.22.1), and an adapted Microbial Isolate LiP Analysis Workflow (located at Zenodo). Processed proteomic data downloads include a sample naming key, normalized quantification results files, and processed protein annotated abundance files.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2021

Transfer learning of memory kernels for transferable coarse-graining of polymer dynamics

The present work concerns the transferability of coarse-grained (CG) modeling in reproducing the dynamic properties of the reference atomistic systems across a range of parameters. In particular, we focus on implicit-solvent CG modeling of polymer solutions. The CG model is based on the generalized Langevin equation, where the memory kernel plays the critical role in determining the dynamics in all time scales. Thus, we propose methods for transfer learning of memory kernels. The key ingredient of our methods is Gaussian process regression. By integration with the model order reduction via proper orthogonal decomposition and the active learning technique, the transfer learning can be practically efficient and requires minimum training data. Through two example polymer solution systems, we demonstrate the accuracy and efficiency of the proposed transfer learning methods in the construction of transferable memory kernels. The transferability allows for out-of-sample predictions, even in the extrapolated domain of parameters. Built on the transferable memory kernels, the CG models can reproduce the dynamic properties of polymers in all time scales at different thermodynamic conditions (such as temperature and solvent viscosity) and for different systems with varying concentrations and lengths of polymers.

Ma, Zhan↗

DOE OSTI2024

Assessment of Weld Microstructure Through Sound Velocity Measurements for Power Plant Applications

Here, this research study employed an immersion-based micro-resolution ultrasonic velocity measurement technique (MUVT) to evaluate Grade 91 (9Cr-1Mo-V) steel welds. This process utilized a 20 MHz focused ultrasonic beam with a spot size of 250 µm, a 6 µm laser vibrometer spot size for detection, and an automated 3-axis raster scanner to accurately collect ultrasonic velocity data from two Grade 91 steel welds fabricated using cold metal transfer (CMT) and flux-cored arc welding (FCAW) processes. By analyzing the MUVT data, the Poisson’s ratio (υ) and modulus of elasticity (E), which are important mechanical properties for weldments, were calculated. The correlation between mechanical properties and ultrasonic velocity was examined. The results indicated that longitudinal ultrasonic velocity could effectively identify base metal, heat-affected zone (HAZ), and weld metal areas, showing a strong correlation with hardness. In particular, the distinctive V-shaped dip in velocity and hardness data across the HAZ areas of both samples highlighted changes in the microstructure of creep strength–enhanced ferritic steel welds. Importantly, the immersion-based MUVT demonstrated high accuracy in small sections of the weld, surpassing the conventional contact ultrasonic testing method in spatial resolution detection.

arc welding↗

DOE OSTI2026

Maximizing machine learning interatomic potential transferability for the discovery of the novel stellated octadecagon Bi18-Pt24 cage structure

Achieving true transferability remains the central challenge for Machine Learning Interatomic Potentials (ML-IAPs) in modeling complex bimetallic nanoclusters across their vast potential energy surfaces. We systematically investigate data selection strategies to optimize the Chebyshev Interaction Model for Efficient Simulation (ChIMES) potential for the Bi-Pt nanoclusters by comparing three innovative sampling methods: Principal Component Analysis (PCA)/k-means (structural diversity), t-distributedStochasticNeighborEmbedding (t-SNE)/k-means (force-space diversity), and hierarchical clustering. Quantitatively, the PCA/k-means strategy proved most effective for global accuracy, yielding the lowest force errors and achieving energy root mean square errors (RMSE) values competitive with Density Functional Theory (DFT), demonstrating excellent accuracy (19.16meV/atom). Structural validation on 34 unique DFT-optimized isomers further confirmed the potential’s high fidelity, with the best model PCA/k-means reproducing structures with an average root mean square deviation (RMSD) of 0.10 Å. However, the t-SNE methods, by maximizing diversity in the force space, demonstrated superior extrapolative power, leading to the more precise prediction of a novel stellated octadecagon Bi18⁢Pt24 cage structure, demonstrating the potential for exploring previously unseen morphologies. Our results establish a clear methodology for strategic data sampling that successfully maximizes ML-IAP transferability, providing an accurate and computationally efficient tool that accelerates the theoretical discovery of complex bimetallic architectures.

Vangheluwe, Raphaël [Université Paris-Saclay, CNRS↗