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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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DOE OSTI2022

Beyond mass: detecting secondary halo properties with galaxy-galaxy lensing

ABSTRACT Secondary halo properties beyond mass, such as the mass accretion rate (MAR), concentration, and the half mass scale, are essential in understanding the formation of large-scale structure and dark matter haloes. In this paper, we study the impact of secondary halo properties on the galaxy-galaxy lensing observable, ΔΣ. We build an emulator trained on N-body simulations to model ΔΣ and quantify the impact of different secondary parameters on the ΔΣ profile. We focus on the impact of MAR on ΔΣ. We show that a 3σ detection of variations in MAR at fixed halo mass could be achieved with the Hyper Suprime Cam survey assuming no baryonic effects and a proxy for MAR with scatter <1.5. We show that the full radial profile of ΔΣ depends on secondary properties at fixed halo mass. Consequently, an emulator that can perform full shape fitting yields better than two times improvement upon the constraints on MAR than only using the outer part of the halo. Finally, we highlight that miscentring and MAR impact the radial profile of ΔΣ in a similar fashion, implying that miscentring and MAR need to be modelled jointly for unbiased estimates of both effects. We show that present-day lensing data sets have the statistical capability to place constraints on halo MAR within our assumptions. Our analysis opens up new possibilities for observationally measuring the assembly history of the dark matter haloes that host galaxies and clusters.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2022

AGNs in post-mergers from the ultraviolet near infrared optical northern survey

The kinematic disturbances associated with major galaxy mergers are known to produce gas inflows, which in turn may trigger accretion onto the supermassive black holes (SMBH) of the participant galaxies. While this effect has been studied in galaxy pairs, the frequency of active galactic nuclei (AGNs) in fully coalesced post-merger systems is poorly constrained due to the limited size or impurity of extant post-merger samples. Previously, we combined convolutional neural network (CNN) predictions with visual classifications to identify a highly pure sample of 699 post-mergers in deep r-band imaging. In the work presented here, we quantify the frequency of AGNs in this sample using three metrics: optical emission lines, mid-infrared (mid-IR) colour, and radio detection of low-excitation radio galaxies (LERGs). We also compare the frequency of AGNs in post-mergers to that in a sample of spectroscopically identified galaxy pairs. We find that AGNs identified by narrow-line optical emission and mid-IR colour have an increased incidence rate in post-mergers, with excesses of ~4 over mass- and redshift-matched controls. The optical and mid-IR AGN excesses in post-mergers exceed the values found for galaxy pairs, indicating that AGN activity in mergers peaks after coalescence. Conversely, we recover no significant excess of LERGs in post-mergers or pairs. Finally, we find that the [O III ] luminosity (a proxy for SMBH accretion rate) in post-mergers that host an optical AGN is ~0.3 dex higher on average than in non-interacting galaxies with an optical AGN, suggesting that mergers generate higher accretion rates than secular triggering mechanisms.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2023

Self-calibrating optical galaxy cluster selection bias using cluster, galaxy, and shear cross-correlations

ABSTRACT The clustering signals of galaxy clusters are powerful tools for self-calibrating the mass–observable relation and are complementary to cluster abundance and lensing. In this work, we explore the possibility of combining three correlation functions – cluster lensing, the cluster–galaxy cross-correlation function, and the galaxy autocorrelation function – to self-calibrate optical cluster selection bias, the boosted clustering and lensing signals in a richness-selected sample mainly caused by projection effects. We develop mock catalogues of redMaGiC-like galaxies and redMaPPer-like clusters by applying halo occupation distribution models to N-body simulations and using counts-in-cylinders around massive haloes as a richness proxy. In addition to the previously known small-scale boost in projected correlation functions, we find that the projection effects also significantly boost three-dimensional correlation functions to scales of 100 $h^{-1} \, \rm Mpc$. We perform a likelihood analysis assuming survey conditions similar to the Dark Energy Survey and show that the selection bias can be self-consistently constrained at the 10 per cent level. We discuss strategies for applying this approach to real data. We expect that expanding the analysis to smaller scales and using deeper lensing data would further improve the constraints on cluster selection bias.

Astronomy & Astrophysics↗
DOE OSTI2023

Using elliptical galaxy kinematics to compare the strength of gravity in cosmological regions of differing gravitational potential – a first look

ABSTRACT Various models of modified gravity invoke ‘screening’ mechanisms that are sensitive to the value of the local gravitational potential. This could have observable consequences for galaxies. These consequences might be seen by comparing two proxies for galaxy mass – their luminosity and their internal kinematics – as a function of local galaxy density. Motivated by this prospect, we have compared the observed properties of luminous red galaxies (LRGs) inside and outside of voids in the cosmic large scale structure. We used archival measurements of line widths, luminosities, redshifts, colours, and positions of galaxies in conjunction with recent void catalogues to construct comparison LRG samples inside and outside of voids. We fitted these two samples to the well-established fundamental plane of elliptical galaxies to constrain any differences between the inferred value of the Newtonian gravitational constant G for the two samples. We obtained a null result, with an upper limit on any fractional difference in G within and outside of cosmological voids to be α = δG/G ∼ 40 per cent. This upper bound is dominated by the small-number statistics of our N ∼ 100 within-void LRG sample. With the caveat that environmental effects could influence various parameters such as star formation, we estimate that a 1 per cent statistical limit on α could be attained with data from 105 elliptical galaxies within voids. This is within the reach of future photometric and spectroscopic surveys, both of which are required to pursue this method.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2023

The SOUX AGN sample: SDSS– XMM-Newton optical, ultraviolet, and X-ray selected active galactic nuclei spanning a wide range of parameter space – sample definition

Abstract We assemble a sample of 696 type 1 active galactic nuclei (AGN) up to a redshift of z = 2.5, all of which have an SDSS spectrum containing at least one broad emission line (H α, H β, or Mg ii) and an XMM-Newton X-ray spectrum containing at least 250 counts in addition to simultaneous optical/ultraviolet photometry from the XMM Optical Monitor. Our sample includes quasars and narrow-line Seyfert 1s: thus our AGN span a wide range in luminosity, black hole mass, and accretion rate. We determine single-epoch black hole mass relations for the three emission lines and find that they provide broadly consistent mass estimates whether the continuum or emission line luminosity is used as the proxy for the broad emission line region radius. We explore variations of the UV/X-ray energy index αox with the UV continuum luminosity and with black hole mass and accretion rate, and make comparisons to the physical quasar spectral energy distribution model qsosed. The majority of the AGN in our sample lie in a region of parameter space with 0.02 < L/LEdd < 2 as defined by this model, with narrow-line type 1 AGN offset to lower masses and higher accretion rates than typical broad-line quasars. We find differences in the dependence of αox on UV luminosity between both narrow/broad-line and radio-loud/quiet subsets of AGN: αox has a slightly weaker dependence on UV luminosity for broad-line AGN and radio-loud AGN have systematically harder αox.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2023

H i -rich but low star formation galaxies in MaNGA: physical properties and comparison to control samples

ABSTRACT Gas-rich galaxies are typically star forming. We make use of H i-MaNGA, a programme of H i follow-up for the Mapping Nearby Galaxies at Apache Point Observatory (MaNGA) survey of the Sloan Digital Sky Surveys, to construct a sample of unusual neutral hydrogen (H i, 21 cm)-rich galaxies that have low star formation rates (SFRs), using infrared colour from the Wide-field Infrared Survey Explorer as a proxy for specific SFR. Out of a set of 1575 MaNGA galaxies with H i-MaNGA detections, we find that 83 (5 per cent) meet our selection criteria to be H i rich with low SFR. We construct two stellar mass-matched control samples: H i-rich galaxies with typical SFR (high SF control) and H i-poor galaxies with low SFR (low H i control). We investigate the properties of each of these samples, comparing physical parameters such as ionization state maps, stellar and ionized gas velocity and dispersion, environment measures, metallicity, and morphology to search for the reasons why these unusual H i-rich galaxies are not forming stars. We find evidence for recent external accretion of gas in some galaxies (via high counter-rotating fractions), along with some evidence for active galactic nucleus (AGN) feedback (from a high central low-ionization emission-line region and/or red geyser fraction), and bar quenching (via an enhanced strong bar fraction). Some galaxies in the sample are consistent with simply having their H i in a high angular momentum, large-radius, low-density disc. We conclude that no single physical process can explain all H i-rich, low-SFR galaxies.

Astronomy & Astrophysics↗
DOE OSTI2023

The intrinsic alignment of red galaxies in DES Y1 redMaPPer galaxy clusters

ABSTRACT Clusters of galaxies trace the most non-linear peaks in the cosmic density field. The weak gravitational lensing of background galaxies by clusters can allow us to infer their masses. However, galaxies associated with the local environment of the cluster can also be intrinsically aligned due to the local tidal gradient, contaminating any cosmology derived from the lensing signal. We measure this intrinsic alignment in Dark Energy Survey (DES) Year 1 redMaPPer clusters. We find evidence of a non-zero mean radial alignment of galaxies within clusters between redshifts 0.1–0.7. We find a significant systematic in the measured ellipticities of cluster satellite galaxies that we attribute to the central galaxy flux and other intracluster light. We attempt to correct this signal, and fit a simple model for intrinsic alignment amplitude (AIA) to the measurement, finding AIA = 0.15 ± 0.04, when excluding data near the edge of the cluster. We find a significantly stronger alignment of the central galaxy with the cluster dark matter halo at low redshift and with higher richness and central galaxy absolute magnitude (proxies for cluster mass). This is an important demonstration of the ability of large photometric data sets like DES to provide direct constraints on the intrinsic alignment of galaxies within clusters. These measurements can inform improvements to small-scale modelling and simulation of the intrinsic alignment of galaxies to help improve the separation of the intrinsic alignment signal in weak lensing studies.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2023

Ly α emission in low-redshift most metal-deficient compact star-forming galaxies

ABSTRACT We present observations with the Cosmic Origins Spectrograph onboard the Hubble Space Telescope of nine most metal-deficient compact star-forming galaxies with oxygen abundances 12 + log(O/H) = 6.97–7.23, redshifts z = 0.02811–0.13320, and stellar masses M⋆ ≤ 107 M⊙. We aim to study the properties of Ly α emission in these extremely metal-deficient objects. We find that all nine galaxies are Ly α emitters (LAEs). We examine various relations between the Ly α escape fraction fesc(Ly α) and other characteristics – such as absolute UV magnitude, oxygen abundance, O32 ratio, stellar mass, Lyman-alpha luminosity, and equivalent width EW(Ly α), ionizing photon production efficiency ξion and velocity separation Vsep between the two peaks of the Ly α profile – of a large sample of LAEs, including our lowest metallicity galaxies and other objects from the literature. We find a relatively tight correlation between fesc(Ly α) and two characteristics, EW(Ly α) and Vsep, whereas no correlation is found between fesc(Ly α) and the oxygen abundance. We also find a relatively tight relation between the Ly α and LyC escape fractions. We propose to use the latter relation to estimate indirectly the escaping ionizing radiation in LAEs, when direct measurements of LyC emission are not possible. We show that the global properties of low-z LAEs are very similar to those of z > 6 galaxies. They are thus ideal local proxies for studying physical processes during the epoch of reionization of the Universe.

Izotov, Y. I. (ORCID:0000000214166082)↗
DOE OSTI2023

Accurate model of the projected velocity distribution of galaxies in dark matter haloes

ABSTRACT We present a per cent-level accurate model of the line-of-sight velocity distribution of galaxies around dark matter haloes as a function of projected radius and halo mass. The model is developed and tested using synthetic galaxy catalogues generated with the UniverseMachine run on the Multi-Dark Planck 2 N-body simulations. The model decomposes the galaxies around a cluster into three kinematically distinct classes: orbiting, infalling, and interloping galaxies. We demonstrate that: (1) we can statistically distinguish between these three types of galaxies using only projected line-of-sight velocity information; (2) the halo edge radius inferred from the line-of-sight velocity dispersion is an excellent proxy for the three-dimensional halo edge radius; and (3) we can accurately recover the full velocity dispersion profile for each of the three populations of galaxies. Importantly, the velocity dispersion profiles of the orbiting and infalling galaxies contain five independent parameters – three distinct radial scales and two velocity dispersion amplitudes – each of which is correlated with mass. Thus, the velocity dispersion profile of galaxy clusters has inherent redundancies that allow us to perform non-trivial systematics checks from a single data set. We discuss several potential applications of our new model for detecting the edge radius and constraining cosmology and astrophysics using upcoming spectroscopic surveys.

Astronomy & Astrophysics↗
DOE OSTI2023

Stellar mass, not dynamical mass nor gravitational potential, drives the mass–metallicity relationship

The widely known relation between stellar mass and gas metallicity [mass–metallicity relation (MZR)] in galaxies is often ascribed to the higher capability of more massive systems to retain metals against the action of galactic outflows. In this scenario the stellar mass would simply be an indirect proxy of the dynamical mass or of the gravitational potential. We test this scenario by using a sample of more than 1000 star-forming galaxies from the MaNGA (Mapping Nearby Galaxies at Apache Point Observatory) survey for which dynamical masses have been accurately determined. By using three different methods (average dispersion, partial correlation coefficients, and random forest), we unambiguously find that the gas metallicity depends primarily and fundamentally on the stellar mass. Once the dependence on stellar mass is taken into account, there is little or no dependence on either dynamical mass or gravitational potential (and, if anything, the metallicity dependence on the latter quantities is inverted). Our result indicates that the MZR is not caused by the retention of metals in more massive galaxies. The direct, fundamental dependence of metallicity on stellar mass suggests the much simpler scenario in which the MZR is just a consequence of the stellar mass being proportional to the integral of metals production in the galaxy.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2024

Two rest-frame wavelength measurements of galaxy sizes at z < 1: the evolutionary effects of emerging bulges and quenched newcomers

We analyse the size evolution of 16 000 star-forming galaxies (SFGs) and 5000 quiescent galaxies (QGs) with mass M * > 10 9.5 M ⊙ at 0.1 < z < 0.9 from the COSMOS field using deep CLAUDS + HSC imaging in two rest-frame wavelengths, 3000 Å (UV light) and 5000 Å (visible light). With half-light radius (R e ) as proxy for size, SFGs at characteristic mass M 0 = 5 × 10 10 M ⊙ grow by 20 per cent (30 per cent) in UV (visible) light since z ~ 1 and the strength of their size evolution increases with stellar mass. After accounting for mass growth due to star formation, we estimate that SFGs grow by 75 per cent in all stellar mass bins and in both rest-frame wavelengths. Redder SFGs are more massive, smaller and more concentrated than bluer SFGs and the fraction of red SFGs increases with time. These results point to the emergence of bulges as the dominant mechanism for the average size growth of SFGs. We find two threshold values for the stellar mass density within central 1 kpc (Σ 1 ): all SFGs with log Σ 1 ≳ 9 are red and only QGs have log Σ 1 ≳ 9.7. The size of M * = M 0 QGs grows by 50 per cent (110 per cent) in the UV (visible) light. Up to $\sim 20~{{\rm per\,cent}}$ of this increase in size of massive QGs is due to newcomers (recently quenched galaxies). However, newcomers cannot explain the observed pace in the size growth of QGs; that trend has to be dominated by processes affecting individual galaxies, such as minor mergers and accretion.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2024

Search for interacting galaxy clusters from SDSS DR-17 employing optimized friends-of-friends algorithm and multimessenger tracers

ABSTRACT In the theoretical framework of hierarchical structure formation, galaxy clusters evolve through continuous accretion and mergers of substructures. Cosmological simulations have revealed the best picture of the universe as a 3D filamentary network of dark-matter distribution called the cosmic web. Galaxy clusters are found to form at the nodes of this network and are the regions of high merging activity. Such mergers being highly energetic, contain a wealth of information about the dynamical evolution of structures in the Universe. Observational validation of this scenario needs a colossal effort to identify numerous events from all-sky surveys. Therefore, such efforts are sparse in literature and tend to focus on individual systems. In this work, we present an improved search algorithm for identifying interacting galaxy clusters and have successfully produced a comprehensive list of systems from SDSS DR-17. By proposing a set of physically motivated criteria, we classified these interacting clusters into two broad classes, ‘merging’ and ‘pre-merging/postmerging’ systems. Interestingly, as predicted by simulations, we found that most cases show cluster interaction along the prominent cosmic filaments of galaxy distribution (i.e. the proxy for dark matter filaments), with the most violent ones at their nodes. Moreover, we traced the imprint of interactions through multiband signatures, such as diffuse cluster emissions in radio or X-rays. Although we could not find direct evidence of diffuse emission from connecting filaments and ridges; our catalogue of interacting clusters will ease locating such faintest emissions as data from sensitive telescopes such as eROSITA or SKA, becomes accessible.

Oak, Tejas↗
DOE OSTI2024

How does the radio enhancement of broad absorption line quasars relate to colour and accretion rate?

ABSTRACT The origin of radio emission in different populations of radio-quiet quasars is relatively unknown, but recent work has uncovered various drivers of increased radio-detection fraction. In this work, we pull together three known factors: optical colour (g − i), C iv distance (a proxy for L/LEdd), and whether or not the quasar contains broad absorption lines (BALQSOs) which signify an outflow. We use SDSS (Sloan Digital Sky Survey) DR14 spectra along with the LOFAR Two Metre Sky Survey Data Release 2 and find that each of these properties have an independent effect. BALQSOs are marginally more likely to be radio-detected than non-BALQSOs at similar colours and L/LEdd, moderate reddening significantly increases the radio-detection fraction and the radio detection increases with L/LEdd above a threshold for all populations. We test a widely used simple model for radio wind shock emission and calculate energetic efficiencies that would be required to reproduce the observed radio properties. We discuss interpretations of these results concerning radio-quiet quasars more generally. We suggest that radio emission in BALQSOs is connected to a different physical origin than the general quasar population since they show different radio properties independent of colour and C iv distance.

Petley, James W. (ORCID:0000000244960754)↗
DOE OSTI2024

Towards quantifying the impact of triaxiality on optical signatures of galaxy clusters: weak lensing and galaxy distributions

ABSTRACT We present observational evidence of the impact of triaxiality on radial profiles that extend to 40 Mpc from galaxy cluster centres in optical measurements. We perform a stacked profile analysis from a sample of thousands of nearly relaxed galaxy clusters from public data releases of the Dark Energy Survey and the Dark Energy Camera Legacy Survey. Using the central galaxy elliptical orientation angle as a proxy for galaxy cluster orientation, we measure cluster weak lensing and excess galaxy density axis-aligned profiles, extracted along the central galaxy’s major or minor axes on the plane of the sky. Our measurements show a ≳ 2σ–3σ difference per radial bin between the normalized axis-aligned profiles. The profile difference between each axis-aligned profile and the azimuthally averaged profile ($\sim \pm 10\,\rm per\ cent-20~{{\ \rm per\ cent}}$ along major/minor axis) appears inside the clusters (∼0.4 Mpc) and extends to the large-scale structure regime (∼10–20 Mpc). The magnitude of the difference appears to be relatively insensitive to cluster richness and redshift, and extends further out in the weak lensing surface mass density than in the galaxy overdensity. Looking forward, this measurement can easily be applied to other observational or simulation data sets and can inform the systematics in cluster mass modelling related to triaxiality. We expect imminent upcoming wide-area deep surveys, such as the Vera C. Rubin Observatory’s Legacy Survey of Space and Time, to improve our quantification of optical signatures of cluster triaxiality.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2025

Effect of the space weather conditions on the Earth magnetosphere soft X-ray emissivity

The aim of the study is to model and characterize the soft X-ray emissivity on the Earth magnetosphere for different space weather conditions (SWC), providing information to interpret the soft X-ray measurements of the Solar wind Magnetosphere Ionosphere Link Explorer space mission. The MHD code pluto in spherical coordinates is used to perform parametric studies with respect to the solar wind (SW) dynamic pressure (considering density and velocity effects independently) as well as the IMF intensity and orientation, predicting the soft X-ray emissivity for different SWC. The integrated soft X-ray emissivity inside the magnetosheath is calculated as a proxy of the soft X-ray emission dependencies with the SWC independently of the satellite orbit and camera line of sight. The analysis indicates fluctuations of the interplanetary magnetic field (IMF) orientation and magnitude may significantly affect the measured soft X-ray emission although changes in the SW dynamic pressure should be the main source of variability. The southward IMF orientation leads to the configuration with the largest soft X-ray emissivity and northward to the lowest. Strongly distorted magnetospheres explored in configurations showing SW and IMF parameters comparable to the impact of interplanetary coronal mass ejections may show a decrease of the soft X-ray emissivity as the IMF magnitude increases, explained by the strong magnetosphere compression and constriction of the magnetosheath region where the soft X-ray emissivity maximum is located. The simulations also indicate large excursions of the soft X-ray emissivity maximum inside the magnetosheath as the IMF magnitude and SW dynamic pressure fluctuate particularly for radial and ecliptic IMF orientations.

Earth↗
DOE OSTI2025

Calibrating the absolute magnitude of type Ia supernovae in nearby galaxies using [O II ] and implications for H 0

The present state of cosmology is facing a crisis where there is a fundamental disagreement in measurements of the Hubble constant ($H_{0}$), with significant tension between the early and late Universe methods. Type Ia supernovae (SNe Ia) are important to measuring $H_{0}$ through the astronomical distance ladder. However, there remains potential to better standardize SN Ia light curves by using known dependencies on host galaxy properties after the standard light curve width and colour corrections have been applied to the peak SN Ia luminosities. To explore this, we use the 5-yr photometrically identified SNe Ia sample obtained by the Dark Energy Survey, along with host galaxy spectra obtained by the Australian Dark Energy Survey. Using host galaxy spectroscopy, we find a significant trend with the equivalent width (EW) of the [O II ] $\lambda \lambda$ 3727, 29 doublet, a proxy for specific star formation rate, and Hubble residuals. We find that the correlation with [O II ] EW is a powerful alternative to the commonly used mass step after initial light-curve corrections. Applying this [O II ] EW correction to 20 SNe Ia in calibrator galaxies observed with WiFeS, we examined the impact on SN Ia absolute magnitudes and $H_{0}$. Our [O II ] EW corrections result in $H_{0}$ values ranging between 73.04 and 73.51 $km$ $s^{-1} \, Mpc^{-1}$, with a combined statistical and systematic uncertainty of $\sim 1.31$ $km$ $s^{-1} \, Mpc^{-1}$. However, even with this additional correction, the impact of host galaxy properties in standardizing SNe Ia appears limited in reducing the current tension ($\sim 5\sigma$) with the cosmic microwave background result for $H_{0}$.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2025

Subhaloes are anisotropically distributed and aligned with the smooth matter distribution of their host haloes

ABSTRACT We investigate the distributions of subhaloes about their hosts in two suites of zoom-in N-body simulations of halo growth – one suite focused on Milky Way-Mass haloes ($\sim 10^{12} \, \mathrm{M}_{\odot }$) and another focused on cluster-mass haloes ($\sim 10^{15} \, \mathrm{M}_{\odot }$) in the Symphony simulation suite. We find, in agreement with previous work on this subject, that subhaloes are distributed anisotropically about their host haloes. In particular, the positions of subhaloes lie preferentially near the major axes of their host haloes, possibly implying that satellite galaxies will exhibit a similar alignment. Furthermore, we show that in two-dimensional projection subhaloes are more likely to be observed near the halo centre (where the central galaxy presumably resides) when the host halo is projected nearly along its major axis. This projection effect is significant. Within projected radii of a few per cent of the virial radius of the host halo, the fraction of mass in subhaloes is $\sim 175~{{\ \rm per\ cent}}$ larger for Milky Way-mass haloes and as much as $\sim 195~{{\ \rm per\ cent}}$ larger for cluster haloes when projected along the major axis as compared to the average from a random projection. This result has consequences for many applications including the interpretation of gravitational lenses. Finally, we find that the orbital angular momentum vector of subhaloes is aligned with the angular momentum vector of their host halo, indicating that a significant component of a halo’s angular momentum may be carried in its subhaloes. This has consequences for galaxy formation models which use host halo angular momentum as a proxy for galaxy momentum.

Mezini, Lorena (ORCID:0000000300053973)↗
DOE OSTI2020

Mechanism of efficient double-strand break repair by a long non-coding RNA

Mechanistic studies in DNA repair have focused on roles of multi-protein DNA complexes, so how long non-coding RNAs (lncRNAs) regulate DNA repair is less well understood. Yet, lncRNA LINP1 is over-expressed in multiple cancers and confers resistance to ionizing radiation and chemotherapeutic drugs. Here, we unveil structural and mechanistic insights into LINP1’s ability to facilitate non-homologous end joining (NHEJ). We characterized LINP1 structure and flexibility and analyzed interactions with the NHEJ factor Ku70/Ku80 (Ku) and Ku complexes that direct NHEJ. LINP1 self-assembles into phase-separated condensates via RNA–RNA interactions that reorganize to form filamentous Ku-containing aggregates. Structured motifs in LINP1 bind Ku, promoting Ku multimerization and stabilization of the initial synaptic event for NHEJ. Significantly, LINP1 acts as an effective proxy for PAXX. Collective results reveal how lncRNA effectively replaces a DNA repair protein for efficient NHEJ with implications for development of resistance to cancer therapy.

59 BASIC BIOLOGICAL SCIENCES↗